Rorug02G0213800

phagosome-lysosome fusion involved in apoptotic cell clearance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0003216
Physical Location & Seq
Reverse (-)
20444538 .. 20446628
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0213800.1

Sequence Viewer

Length: 2091 bp
ATGGGTATGGCCTTTGGTTTCCCTTTCCCCAAGCATTTCAATTTGCTTGCAACCTTGGAAATTATAACACCAACCCACCTCAAGTCCTTGACATCTCTTGCCCATAACACAAGCCACACAGAGGCCTCAAACTTTTACTCGTCTCTGATTCAACAATGCACACAGACAAAGTCCCTAAGAGGCTTGGGAATAGTTCAGACCCATATGATCAAATCCGGGTACATACAACTCACTATAGCCAATAAGCTCATTGATGGGTGTTTGAAATGTGGTAGCTTACATAATGCACGTAAGGTGTTCGACGAATTGCCTGAGAGACATGTAGTCATCTGGAATGCCATGATTTCTTCATACATTGGCCACAAGAAGAGTAAGGAGGCTATTGGGTTGTATGGGAAGATGGTCTTTGATGGAGTTTTGCCGGATGAGTACACGTTTTCCAGTGTTTTCAAGGCTTTTTCGGGTCTGGGTCTTGTATATGAAGCGCGGAGGGCTCATGGGTTGTCAGTGGTTTTGGGTCTGGAGGTGGCAAATGTGTTTGTTGGTAGTGCTCTTGTTGATATGTATGCAAAGTTTGGTAGAATGGGGGATGCAAGGTTGGTGTCGAATCGTGTTGGGGAGAAAGATGTTGTTTTGTTTACGGCGCTGATTGTTGGTTACTCTCAGCATGGTGATGATGGTGAAGCTCTTGAGGTTTTTGGGGACATGATCAACCAAGGAGTTAAGGCTAATGAGTATACTTTTGCTAGCATCTTGATCACTTGTGGGAACTTGGAGGATTTAACTCATGGTAAGTTGGTCCATGGTCTTGTTGTCAAATCTGGTTGGGAAGCTGCTGTGGCGTCACAGACTTCACTTCTAACAATGTATGCTAGGTGTGGATTGATTGATGATTCTCTGAGGATTTTTAAAAGGTTTCAGCATCCAAACCTGGTAACTTGGACGTCTCTTATCGTGGCTCTTGTTCGAAATGGTAGAGAAGAGTTGGCTTTGACAAAGTTTAGAAAGATGATTCGTGATTCAGTAGTTCCGAATTCTTTTACTTTATCTAGTGTTCTTCAGGCATGCTCAAGCCTTGCTATGATGGATGAAGGACAGCAAATTCATGCCACGGTCACAAAATTTGGATTGGATAGACACATATATGCTGGTGCTGCTCTCATTAACTTGTATGGGAAATGCGGAAATATAGAGATGGCAAGGTCAGTTTTTGATGCCTTGATTGAAATTGATTTGGTCTCCATGAATTCCATGATATATAGCTATGCGCAGAATGGATTTGGACATGAAGCACTTCAGCTTTTTGATGGGATGAAAGACTTAAGACTTGAACCAAACGATGTAACAATTTTGAGTGTTCTCTTGGCATGCAATAATTCAGGATTGGTGCAACAAGGCTGCCAAATTTTTTCTACCATTAGGAGTAATCACAATATTGAGTTGACAAGGGATCACTATGCTTGTATGGTTGATTTGCTGGGGCGTGCTGGAAGACTTGAAGATGCCGAAATGTTGATAAAAGAAGTCAAAAATCCAGATTTAGTATTATGGAGGGCACTGCTAAGTGCATGTAAACTTCATGGACAGGTTGAGATGGCAGAAAGAGCTCTAAAGAAAGTGCTTGAACTTGCTCCAGGAGACGGAGGATCTCATGTCCTGTTGACAAATCTTTATGCTTCAACTGGTAATTGGAGTCAAGTTATTGATATGAAAAGTACAATGAGGGAGATGAAATTCCAGAAGAACCCGGCAATGAGTTGGGTTGATGTGGACAGGGAGGTTCACACTTTCATGGCTGGAGATTTGTCCCATCCAAGATCTAGAGAGATAAATGAAACCTTAGAGAAATTGTTTGAGGAGGTGCAAATATTGGGTTATGTTCCTGATACAAGATATGTGTTACAGGATTTGGATGAGGAGAAGAAGAAGAGGTCTTTGTACTATCACAGTGAAAAGCTAGCCATTGCCTTTGCTCTATTAGTGAGTAGTAAAAAGAATACCAGCATCAGGATATTCAAGAACCTTAAAGTTTGTGGGGACTGTCATTCCTGGATAAAATTTGTCACCTGTTTAAGGACAAGCATAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Spatacsin_C

Protein Analysis

696

Amino Acids

77.51

Weight (kDa)

7.61

Isoelectric Point (pI)

35.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 107 - 153 6.3e-12 PPR repeat family
PPR_2 PF13041 208 - 253 1.6e-08 PPR repeat family
PPR_3 PF13812 208 - 257 8.6e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 309 - 357 3.4e-08 PPR repeat family
PPR_2 PF13041 411 - 456 3e-07 PPR repeat family
PPR PF01535 413 - 441 5.2e-06 PPR repeat
E_motif PF20431 527 - 589 4e-14 E motif
Eplus_motif PF20430 594 - 619 5.1e-08 E+ motif
DYW_deaminase PF14432 625 - 691 2.9e-20 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 65
AatII GACGTC 1 cut(s) 947
Acc16I TGCGCA 1 cut(s) 1269
AccI GTMKAC 1 cut(s) 737
AccII CGCG 1 cut(s) 487
AciI CCGC 2 cut(s) 487, 1182
AclWI GGATC 2 cut(s) 1458, 1654
AcoI YGGCCR 1 cut(s) 358
AcsI RAATTY 7 cut(s) 1033, 1101, 1121, 1246, 1404, 1733, 2057
AcuI CTGAAG 2 cut(s) 1043, 1280
AcyI GRCGYC 2 cut(s) 842, 944
AfaI GTAC 4 cut(s) 221, 431, 1717, 1940
AfiI CCNNNNNNNGG 4 cut(s) 121, 1640, 2007, 2073
AflII CTTAAG 1 cut(s) 1321
AflIII ACRYGT 2 cut(s) 319, 432
AhdI GACNNNNNGTC 1 cut(s) 323
AjnI CCWGG 3 cut(s) 930, 1633, 2048
AluBI AGCT 8 cut(s) 247, 276, 686, 833, 1263, 1300, 1607, 1957
AluI AGCT 8 cut(s) 247, 276, 686, 833, 1263, 1300, 1607, 1957
Alw21I GWGCWC 2 cut(s) 553, 1609
Alw26I GTCTC 5 cut(s) 147, 310, 951, 1243, 1632
AlwI GGATC 2 cut(s) 1458, 1654
AoxI GGCC 3 cut(s) 9, 123, 358
ApeKI GCWGC 3 cut(s) 833, 1154, 1398
ApoI RAATTY 7 cut(s) 1033, 1101, 1121, 1246, 1404, 1733, 2057
Asp700I GAANNNNTTC 1 cut(s) 1293
AspLEI GCGC 3 cut(s) 487, 646, 1270
AspS9I GGNCC 1 cut(s) 799
AsuC2I CCSGG 2 cut(s) 217, 1748
AsuHPI GGTGA 3 cut(s) 683, 692, 2056
AsuII TTCGAA 1 cut(s) 967
AsuNHI GCTAGC 2 cut(s) 746, 1957
AvaII GGWCC 1 cut(s) 799
BaeGI GKGCMC 1 cut(s) 1558
BalI TGGCCA 1 cut(s) 360
BanII GRGCYC 2 cut(s) 496, 1609
BbsI GAAGAC 1 cut(s) 1498
Bbv12I GWGCWC 2 cut(s) 553, 1609
BbvI GCAGC 3 cut(s) 820, 1141, 1385
BccI CCATC 9 cut(s) 248, 394, 404, 671, 1078, 1189, 1301, 1588, 1818
BceAI ACGGC 1 cut(s) 657
BciT130I CCWGG 3 cut(s) 932, 1635, 2050
BclI TGATCA 3 cut(s) 207, 708, 756
BcnI CCSGG 2 cut(s) 217, 1748
BcoDI GTCTC 5 cut(s) 147, 310, 951, 1243, 1632
BfaI CTAG 5 cut(s) 747, 873, 1050, 1821, 1958
BfmI CTRYAG 1 cut(s) 234
BfoI RGCGCY 1 cut(s) 647
BfrI CTTAAG 1 cut(s) 1321
BglII AGATCT 1 cut(s) 1817
BisI GCNGC 3 cut(s) 834, 1155, 1399
BlsI GCNGC 3 cut(s) 835, 1156, 1400
Bme1390I CCNGG 5 cut(s) 217, 932, 1635, 1748, 2050
Bme18I GGWCC 1 cut(s) 799
BmeRI GACNNNNNGTC 1 cut(s) 323
BmgT120I GGNCC 1 cut(s) 799
BmrFI CCNGG 5 cut(s) 217, 932, 1635, 1748, 2050
BmsI GCATC 6 cut(s) 580, 759, 931, 1204, 1492, 2013
BmtI GCTAGC 2 cut(s) 750, 1961
BpiI GAAGAC 1 cut(s) 1498
BpmI CTGGAG 3 cut(s) 542, 1617, 1818
Bpu14I TTCGAA 1 cut(s) 967
BpuEI CTTGAG 3 cut(s) 65, 710, 1054
BpuMI CCSGG 2 cut(s) 217, 1748
BsaAI YACGTR 1 cut(s) 290
BsaHI GRCGYC 2 cut(s) 842, 944
BsaI GGTCTC 1 cut(s) 1243
BsaJI CCNNGG 4 cut(s) 54, 715, 802, 1110
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 1640, 2007, 2073
Bse1I ACTGG 2 cut(s) 441, 1687
Bse3DI GCAATG 2 cut(s) 1758, 1962
BseBI CCWGG 3 cut(s) 932, 1635, 2050
BseDI CCNNGG 4 cut(s) 54, 715, 802, 1110
BseGI GGATG 7 cut(s) 430, 595, 922, 1093, 1317, 1810, 1918
BseLI CCNNNNNNNGG 4 cut(s) 121, 1640, 2007, 2073
BseMI GCAATG 2 cut(s) 1758, 1962
BseMII CTCAG 3 cut(s) 303, 677, 890
BseNI ACTGG 2 cut(s) 441, 1687
BseRI GAGGAG 2 cut(s) 1871, 1931
BseSI GKGCMC 1 cut(s) 1558
BseXI GCAGC 3 cut(s) 820, 1141, 1385
BseYI CCCAGC 1 cut(s) 1477
Bsh1236I CGCG 1 cut(s) 487
BshFI GGCC 3 cut(s) 11, 125, 360
BsiHKAI GWGCWC 2 cut(s) 553, 1609
BsiSI CCGG 3 cut(s) 216, 422, 1748
BslFI GGGAC 4 cut(s) 157, 716, 1792, 2051
BslI CCNNNNNNNGG 4 cut(s) 121, 1640, 2007, 2073
BsmAI GTCTC 5 cut(s) 147, 310, 951, 1243, 1632
BsmBI CGTCTC 3 cut(s) 147, 951, 1632
BsmFI GGGAC 4 cut(s) 157, 716, 1792, 2051
BsmI GAATGC 1 cut(s) 340
BsnI GGCC 3 cut(s) 11, 125, 360
Bso31I GGTCTC 1 cut(s) 1243
Bsp119I TTCGAA 1 cut(s) 967
Bsp1286I GDGCHC 4 cut(s) 496, 553, 1558, 1609
Bsp143I GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
Bsp19I CCATGG 1 cut(s) 802
BspACI CCGC 2 cut(s) 487, 1182
BspANI GGCC 3 cut(s) 11, 125, 360
BspCNI CTCAG 3 cut(s) 304, 676, 891
BspFNI CGCG 1 cut(s) 487
BspOI GCTAGC 2 cut(s) 750, 1961
BspPI GGATC 2 cut(s) 1458, 1654
BspT104I TTCGAA 1 cut(s) 967
BspTI CTTAAG 1 cut(s) 1321
BspTNI GGTCTC 1 cut(s) 1243
BsrDI GCAATG 2 cut(s) 1758, 1962
BsrI ACTGG 2 cut(s) 441, 1687
BssECI CCNNGG 4 cut(s) 54, 715, 802, 1110
BssMI GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
BssNAI GTATAC 1 cut(s) 738
BssNI GRCGYC 2 cut(s) 842, 944
BssT1I CCWWGG 3 cut(s) 54, 715, 802
Bst1107I GTATAC 1 cut(s) 738
Bst2UI CCWGG 3 cut(s) 932, 1635, 2050
Bst4CI ACNGT 3 cut(s) 1114, 1949, 2042
Bst6I CTCTTC 3 cut(s) 362, 975, 1922
BstACI GRCGYC 2 cut(s) 842, 944
BstAFI CTTAAG 1 cut(s) 1321
BstBAI YACGTR 1 cut(s) 290
BstBI TTCGAA 1 cut(s) 967
BstC8I GCNNGC 6 cut(s) 48, 748, 1066, 1369, 1485, 1959
BstDEI CTNAG 6 cut(s) 176, 312, 663, 899, 1562, 1840
BstDSI CCRYGG 2 cut(s) 802, 1110
BstENI CCTNNNNNAGG 1 cut(s) 2071
BstF5I GGATG 7 cut(s) 430, 595, 922, 1093, 1317, 1810, 1918
BstFNI CGCG 1 cut(s) 487
BstH2I RGCGCY 1 cut(s) 647
BstHHI GCGC 3 cut(s) 487, 646, 1270
BstKTI GATC 6 cut(s) 210, 711, 759, 1453, 1649, 1820
BstMAI GTCTC 5 cut(s) 147, 310, 951, 1243, 1632
BstMBI GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
BstMWI GCNNNNNNNGC 4 cut(s) 491, 839, 1154, 1604
BstNI CCWGG 3 cut(s) 932, 1635, 2050
BstNSI RCATGY 4 cut(s) 323, 1068, 1371, 1572
BstSCI CCNGG 5 cut(s) 215, 930, 1633, 1746, 2048
BstSFI CTRYAG 1 cut(s) 234
BstSLI GKGCMC 1 cut(s) 1558
BstUI CGCG 1 cut(s) 487
BstV1I GCAGC 3 cut(s) 820, 1141, 1385
BstV2I GAAGAC 1 cut(s) 1498
BstX2I RGATCY 2 cut(s) 1646, 1817
BstYI RGATCY 2 cut(s) 1646, 1817
BstZ17I GTATAC 1 cut(s) 738
BsuRI GGCC 3 cut(s) 11, 125, 360
BtgI CCRYGG 2 cut(s) 802, 1110
BtsCI GGATG 7 cut(s) 430, 595, 922, 1093, 1317, 1810, 1918
BtsI GCAGTG 1 cut(s) 1556
BtsIMutI CAGTG 4 cut(s) 448, 513, 1556, 1954
Cac8I GCNNGC 6 cut(s) 48, 748, 1066, 1369, 1485, 1959
CfoI GCGC 3 cut(s) 487, 646, 1270
Cfr13I GGNCC 1 cut(s) 799
CseI GACGC 1 cut(s) 831
CsiI ACCWGGT 1 cut(s) 930
Csp6I GTAC 4 cut(s) 220, 430, 1716, 1939
CviQI GTAC 4 cut(s) 220, 430, 1716, 1939
DdeI CTNAG 6 cut(s) 176, 312, 663, 899, 1562, 1840
DpnI GATC 6 cut(s) 209, 710, 758, 1452, 1648, 1819
DpnII GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
DraI TTTAAA 1 cut(s) 910
DriI GACNNNNNGTC 1 cut(s) 323
EaeI YGGCCR 1 cut(s) 358
Eam1104I CTCTTC 3 cut(s) 362, 975, 1922
Eam1105I GACNNNNNGTC 1 cut(s) 323
EarI CTCTTC 3 cut(s) 362, 975, 1922
Ecl136II GAGCTC 1 cut(s) 1607
Eco130I CCWWGG 3 cut(s) 54, 715, 802
Eco147I AGGCCT 1 cut(s) 125
Eco24I GRGCYC 2 cut(s) 496, 1609
Eco31I GGTCTC 1 cut(s) 1243
Eco47I GGWCC 1 cut(s) 799
Eco53kI GAGCTC 1 cut(s) 1607
Eco57I CTGAAG 2 cut(s) 1043, 1280
EcoICRI GAGCTC 1 cut(s) 1607
EcoNI CCTNNNNNAGG 1 cut(s) 2071
EcoRI GAATTC 2 cut(s) 1033, 1246
EcoRII CCWGG 3 cut(s) 930, 1633, 2048
EcoT14I CCWWGG 3 cut(s) 54, 715, 802
EcoT38I GRGCYC 2 cut(s) 496, 1609
ErhI CCWWGG 3 cut(s) 54, 715, 802
Esp3I CGTCTC 3 cut(s) 147, 951, 1632
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 4 cut(s) 157, 716, 1792, 2051
FauNDI CATATG 1 cut(s) 204
FbaI TGATCA 3 cut(s) 207, 708, 756
FblI GTMKAC 1 cut(s) 737
Fnu4HI GCNGC 3 cut(s) 834, 1155, 1399
FokI GGATG 7 cut(s) 437, 602, 909, 1100, 1324, 1797, 1925
FriOI GRGCYC 2 cut(s) 496, 1609
Fsp4HI GCNGC 3 cut(s) 834, 1155, 1399
FspBI CTAG 5 cut(s) 747, 873, 1050, 1821, 1958
FspI TGCGCA 1 cut(s) 1269
GlaI GCGC 3 cut(s) 486, 645, 1269
GluI GCNGC 3 cut(s) 834, 1155, 1399
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 3 cut(s) 542, 1617, 1818
HaeII RGCGCY 1 cut(s) 647
HaeIII GGCC 3 cut(s) 11, 125, 360
HapII CCGG 3 cut(s) 216, 422, 1748
HgaI GACGC 1 cut(s) 831
HhaI GCGC 3 cut(s) 487, 646, 1270
Hin1I GRCGYC 2 cut(s) 842, 944
Hin6I GCGC 3 cut(s) 485, 644, 1268
HinP1I GCGC 3 cut(s) 485, 644, 1268
HincII GTYRAC 2 cut(s) 1443, 1662
HindII GTYRAC 2 cut(s) 1443, 1662
HinfI GANTC 6 cut(s) 148, 607, 893, 1012, 1019, 1693
HpaII CCGG 3 cut(s) 216, 422, 1748
HphI GGTGA 3 cut(s) 683, 692, 2056
Hpy166II GTNNAC 8 cut(s) 432, 639, 738, 1443, 1574, 1662, 1771, 1783
Hpy188I TCNGA 4 cut(s) 147, 198, 900, 1032
Hpy8I GTNNAC 8 cut(s) 432, 639, 738, 1443, 1574, 1662, 1771, 1783
Hpy99I CGWCG 1 cut(s) 305
HpyAV CCTTC 1 cut(s) 1085
HpyCH4III ACNGT 3 cut(s) 1114, 1949, 2042
HpyCH4IV ACGT 3 cut(s) 289, 434, 944
HpyCH4V TGCA 9 cut(s) 50, 159, 287, 569, 593, 1371, 1390, 1568, 1864
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 839, 1154, 1604
HpyF3I CTNAG 6 cut(s) 176, 312, 663, 899, 1562, 1840
HpySE526I ACGT 3 cut(s) 289, 434, 944
Hsp92I GRCGYC 2 cut(s) 842, 944
HspAI GCGC 3 cut(s) 485, 644, 1268
Ksp22I TGATCA 3 cut(s) 207, 708, 756
Kzo9I GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
LmnI GCTCC 1 cut(s) 1636
Lsp1109I GCAGC 3 cut(s) 820, 1141, 1385
LweI GCATC 6 cut(s) 580, 759, 931, 1204, 1492, 2013
MabI ACCWGGT 1 cut(s) 930
MaeI CTAG 5 cut(s) 747, 873, 1050, 1821, 1958
MaeII ACGT 3 cut(s) 289, 434, 944
MaeIII GTNAC 7 cut(s) 656, 843, 934, 1114, 1342, 1899, 2062
MalI GATC 6 cut(s) 209, 710, 758, 1452, 1648, 1819
MboI GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
MflI RGATCY 2 cut(s) 1646, 1817
MhlI GDGCHC 4 cut(s) 496, 553, 1558, 1609
MlsI TGGCCA 1 cut(s) 360
MluNI TGGCCA 1 cut(s) 360
MlyI GAGTC 1 cut(s) 1702
Mox20I TGGCCA 1 cut(s) 360
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 360
MseI TTAA 8 cut(s) 723, 782, 909, 1164, 1322, 2025, 2072, 2089
MslI CAYNNNNRTG 3 cut(s) 672, 1143, 1790
Msp20I TGGCCA 1 cut(s) 360
MspCI CTTAAG 1 cut(s) 1321
MspI CCGG 3 cut(s) 216, 422, 1748
MspR9I CCNGG 5 cut(s) 217, 932, 1635, 1748, 2050
Mva1269I GAATGC 1 cut(s) 340
MvaI CCWGG 3 cut(s) 932, 1635, 2050
MvnI CGCG 1 cut(s) 487
MwoI GCNNNNNNNGC 4 cut(s) 491, 839, 1154, 1604
NciI CCSGG 2 cut(s) 217, 1748
NcoI CCATGG 1 cut(s) 802
NdeI CATATG 1 cut(s) 204
NdeII GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
NheI GCTAGC 2 cut(s) 746, 1957
NmuCI GTSAC 3 cut(s) 843, 1114, 2062
NsbI TGCGCA 1 cut(s) 1269
NspI RCATGY 4 cut(s) 323, 1068, 1371, 1572
NspV TTCGAA 1 cut(s) 967
PaeI GCATGC 2 cut(s) 1068, 1371
PceI AGGCCT 1 cut(s) 125
PciI ACATGT 1 cut(s) 319
PctI GAATGC 1 cut(s) 340
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 5 cut(s) 148, 607, 893, 1012, 1019
PflFI GACNNNGTC 1 cut(s) 169
PfoI TCCNGGA 2 cut(s) 1633, 2048
PkrI GCNGC 3 cut(s) 835, 1156, 1400
PleI GAGTC 1 cut(s) 1701
PpsI GAGTC 1 cut(s) 1701
Ppu21I YACGTR 1 cut(s) 290
PscI ACATGT 1 cut(s) 319
PsiI TTATAA 1 cut(s) 65
Psp124BI GAGCTC 1 cut(s) 1609
Psp6I CCWGG 3 cut(s) 930, 1633, 2048
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 3 cut(s) 930, 1633, 2048
PspPI GGNCC 1 cut(s) 799
PsuI RGATCY 2 cut(s) 1646, 1817
PsyI GACNNNGTC 1 cut(s) 169
RsaI GTAC 4 cut(s) 221, 431, 1717, 1940
RsaNI GTAC 4 cut(s) 220, 430, 1716, 1939
RseI CAYNNNNRTG 3 cut(s) 672, 1143, 1790
SacI GAGCTC 1 cut(s) 1609
SaqAI TTAA 8 cut(s) 723, 782, 909, 1164, 1322, 2025, 2072, 2089
SatI GCNGC 3 cut(s) 834, 1155, 1399
Sau3AI GATC 6 cut(s) 207, 708, 756, 1450, 1646, 1817
Sau96I GGNCC 1 cut(s) 799
SchI GAGTC 1 cut(s) 1702
ScrFI CCNGG 5 cut(s) 217, 932, 1635, 1748, 2050
SduI GDGCHC 4 cut(s) 496, 553, 1558, 1609
SexAI ACCWGGT 1 cut(s) 930
SfaNI GCATC 6 cut(s) 580, 759, 931, 1204, 1492, 2013
SfcI CTRYAG 1 cut(s) 234
SfuI TTCGAA 1 cut(s) 967
SinI GGWCC 1 cut(s) 799
SmiMI CAYNNNNRTG 3 cut(s) 672, 1143, 1790
SmlI CTYRAG 4 cut(s) 80, 689, 1069, 1321
SmoI CTYRAG 4 cut(s) 80, 689, 1069, 1321
SphI GCATGC 2 cut(s) 1068, 1371
SseBI AGGCCT 1 cut(s) 125
SsiI CCGC 2 cut(s) 487, 1182
SspI AATATT 2 cut(s) 1435, 1869
SspMI CTAG 5 cut(s) 747, 873, 1050, 1821, 1958
SstI GAGCTC 1 cut(s) 1609
StuI AGGCCT 1 cut(s) 125
StyD4I CCNGG 5 cut(s) 215, 930, 1633, 1746, 2048
StyI CCWWGG 3 cut(s) 54, 715, 802
TaaI ACNGT 3 cut(s) 1114, 1949, 2042
TaiI ACGT 3 cut(s) 292, 437, 947
TaqI TCGA 3 cut(s) 300, 605, 967
TatI WGTACW 3 cut(s) 429, 1715, 1938
TfiI GAWTC 5 cut(s) 148, 607, 893, 1012, 1019
Tru1I TTAA 8 cut(s) 723, 782, 909, 1164, 1322, 2025, 2072, 2089
Tru9I TTAA 8 cut(s) 723, 782, 909, 1164, 1322, 2025, 2072, 2089
TscAI CASTG 4 cut(s) 448, 513, 1563, 1954
TseFI GTSAC 3 cut(s) 843, 1114, 2062
TseI GCWGC 3 cut(s) 833, 1154, 1398
Tsp45I GTSAC 3 cut(s) 843, 1114, 2062
TspGWI ACGGA 1 cut(s) 1656
TspRI CASTG 4 cut(s) 448, 513, 1563, 1954
Tth111I GACNNNGTC 1 cut(s) 169
Vha464I CTTAAG 1 cut(s) 1321
VpaK11BI GGWCC 1 cut(s) 799
XagI CCTNNNNNAGG 1 cut(s) 2071
XapI RAATTY 7 cut(s) 1033, 1101, 1121, 1246, 1404, 1733, 2057
XbaI TCTAGA 1 cut(s) 1820
XceI RCATGY 4 cut(s) 323, 1068, 1371, 1572
XmiI GTMKAC 1 cut(s) 737
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 5 cut(s) 747, 873, 1050, 1821, 1958
ZraI GACGTC 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.