Rh2DG295600

phagosome-lysosome fusion involved in apoptotic cell clearance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003216
Physical Location & Seq
Reverse (-)
35061445 .. 35080597
19153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG295600.1

Sequence Viewer

Length: 9348 bp
ATGGTCCGTACAACTTTCCGGATCCAAATGGATTTGTCTGTGGGTGATAAAGGACTTGCTACACTTCAGTTGCTCAAATGGGGCCCTTCTCAGCCCCAACTAAACTTGTCAGAATTTCGTGAAGCCTTCATTTCACCTACAAGACAGTTATTATTATTGCTTTCGTATCAGTGTGAGGCTTTATTGCTTCCCCTAATTACAGGTAGTAATAATTTGGAGTGTAATATTGATGAAAGTCTTCAAAGTCCAGAGACAGAGCCTGGTAGGTCAGATTCAATAAGGGATGATTTGCCATGCACATCTGGATCATTAGGAGATGTTGATAATGATTTGAGTTTTGGAGGGGACAGTTTAAGATCTAAAAGTTACCCTTTTGTTGGTGATGTTAACTCTCTGGCTTGGGGCGTTTGTGAGGACACTTATAATCAGCACAAGGATGCTTTATTTAGAGAGCTTTTGTTTGTGTGTGGCAAGCAAGGTATTATGGTCCATGCTTTTGTTGAATCTACCGGAAATACTGCAACAACCAGCAATGCACGGGAAGGTGGGTATGGGCAAGGGAGGTGGGTTGAGTGGGGGCCTTCCGCTTCTTTAATTGGAAATATGGAGGTGGAGGAACCTACCAGTTTGAGTTCTGAAGCTACTGGAAATATTGAATTTAACAAATCCAATGGAAACAGTGAAAGTCCCCATATTTGTAATGTGGATGGGAATGAGGAGTTCTCAAAAAGTGTTGCTTCTAAAAGATGGTTGCAATCTTTTTTGACTAAAGTTGAAAATGTTGAATATAATGGTAAAATATTGACCAGGTTCCCGGAAAAGTCATTGTTGCCTAGCTCTGCAAGAGTTGTTTCATTTAGTTTATTTAATAGTAGTAATTCGCCAATTTTGGACTACCTTTCAAACAATGATTCTGCATCAGATAAGGCATGCGGTCAGGAAACAGTTCATGAGTTGGAGAGTGATAAATCTCTGAAATTAGACATAACTTCATCTGATCCACATTTCAAGTCTGAGACTTTGTCCAATCTTTTAGGTGTTGGAATGAATAGTGTGTACAAATGCTGCAGAGTGTTCTCAAGCAATTCTCATTACTTCATTGGATTTGTTTTCACACAGGTTGATCCGGTAATTGTCAATACTAGTGATGAAAGTGGAAAAAGCAAGAAGAATAATGTACTGCTTATTGCTAGATTAGACCACATGGGAATTCATTGGGTTTCCTCAGTGAAGCTTGACGAAAGTCCAAATATTGGCTCAGTAGCACAATGGACAGACTTCCACTTTTCTGATAAACTTCTTGTTTGTCTTAATGCTTGTGGGCTAATTGTATTTTATGCAGCAATGTCAGGTGAGTATGTTGCACATATAGATATTTTACAGACTTTAGGACTCAACTCTGAGTTGCATTTGCAGAAGCAGGAAGCAGTTTCCACAGGTTATGATAAGCATATTACTCAAGTTGATGACATTCAGAACAAATCAGTTTTGCAACATGTTGATTATTCTGGCAGGAGACTGTTTAAAAGGTTGATTTCTGCTTCACATACCTCTCTAGTAGCTGCTATTGATGATTATGGTGTAATATATGTGGTTTCTGCTGGTGAATATCTACCGGACAAATATTATACAAATGCGAAACTACTTCCACATATTCAGCATCTGGAACTTGGTATGTTGGCTGGTTGGGAGGTTGGTGGTTCTGATATAAGCCACCAGAGGGTATATTCTGAGATATCTGGTTTGTGGAATTCTATCATTCCATCCATGATGAAAGGAAGATCCTTCCTGGATGGCTCTGGGAAACAAGTGCTTCAGAGAAACCACGAGTTATACCTCAAACAAGAAGGGATTGGATACAGATCAGAAGTAACTGATCAGAAGCTTGATGACTCTCACAGAAAGTCACACCTTATGCGCAGGATCTTTGTTCCCAGTTACAGATTTAGTGAGAAGGATACTATCTGTTTTTCTCCATTGGGAATTACTCAGCTTATGAAGAACCAAAATTTGCACGATCAGAGGGGTTCTCAAATTGTTCATCTCAATCTGCATGCAGAATCAGCAGTTCGTGATGACAGCTTTTTGAATACTGGTTGTAAAAAGGTTTATCTCCACGGGAAAGAAGAATCCTTTATTGATGAGGCAGTGGGTTGCACATTCCAGGGATGCATTTATTTGGTTACAGTAAGTGGACTTTCGGTGGTGCTTCCCTCTATAGCAGTTTCATCAAATTTCCTTCCCGTAGAAGTTATTGGATGTCGGCAGTTGTGTGTCAACTCAGGCATTGGTTATCAAGTGAAAGATATAAGGGAAGCTAAAGAATCTAAACAGCCTTGGTCACCATGGAATGTTGAAATTATGGACAGAGTTATCCTATATGAAAGCGCTGAAGAAGCCGATCGCTTATGCTTGGAGAATGGTTGGGACCTGAAAATATCTCGGATGCGTCGGCTGCAGTTGGCACTGGATTACTTGAAATTTGATGAGATAGAGCGATCATTAGAAAACCTTGTGGGTGTCAATTTGGCAGAAGAGGGTGTACTGAGATTGCTATTTGCGGCTGTTTATCTGATGCTTCGTAAAGTTGGCAATGATAATGAGGTTTCTGCTGCATCAAGGCTTCTTGCATTAGCCACTTTTTTTGCGACGAAAATGATTCGCAAGTATTGGTTGCTAGAACATAGGAAAGATGCATATGAATCTGGTAGGACCCAAATTCTCTCTCTTCCACCAGTTTCACCGGTGAAGGAAGAAGATGAAATGGCAAATTCAAGGAGGCTTCGTGAGATGGCTCACTTTTTGGAGATAATTCGAAATCTGCAATCTCGACTTGGTTCCAAGTATAAGAGGCCAGGCCAAGAATCGGTGGATAGTGGGGAAGCATCAAGATTGGTTGACACTGATTTATTGCAGAACGAATCTCAGCTATCAATTGTATCTGTGGACACTATATCTTTGGAGACATCAAAACAGCATGAAGTTTCTTTCCCTGTATCGACATCAGGATTTAACTATACTGATAATCTTGCTTTAACACCTGTGGATTCTAAAGTCCCTTTGGACCCAGAGGATTTAAGTGAAGTATCTGCTCTTGTGCCACGAGGGGGTCTCTTAGAGAAGAAAATTCTTCCCTTAGAGAATCCGAAAGAGATGATTGCTCGTTGGAAGATAGATAATCTAGACCTTAGGGCTGTAGTCAGTGATGCTTTACTCTCTGGTCGTCTGCCCTTAGCAGTTCTTCAACTACATCTTCACCGTTCAAGAGATTCATTTTCTGGAAAGGAGCCTCATGATACTTTCACTGAAGTCCGTGACGTTGGAAGAGCTATTGCTTATGACCTATTTTTGAAGGGTGAATCTGGACTTGCTGTGGCCACATTGCAAAGGCTCGGAGAGGATGTAGAAACCAGCCTTAAGCAGTTATTACTCGGCACAGTGAGACGATCTCTTCGTGTGCAAATCACTGAGGAGATGAATAAATATGGTTATCTGGGATCTTATGAGTGGAAGATATTGGATAGGATATCACTTATTGAGAGGCTATACCCCAGCAGTAGTTTTTGGAAAACGCTTCATGGACGGCAGAAAGAATTCACTCGAATTCCAGCAAGTTCCAGTTTGCCCAAGAGATATTATTTGCGCCTACTGGATTCACCTGTAGTCAACAATTTTACCATCGAGTCTGATGAAATTGATGGAGTTGTTTTTGGTTCATGGACAAACGTAAATGAAAATCCTTCTGGTCCTATGGTTGATGAAGATAATGCATACGCTGGTTACTGGGCTGCTGCTGCTGTATGGTTTAGTTTCTATGATCAAAGAACTGTTGATCGAATTGTTTTGGATCAGTCATCTTTCATGGGTGTGCATGTCTTGTGGGAATCACAGCTTGAGTACCATGCATGCCACAATGACTGGGAGGAAGTCTCTAGACTCCTGGACCTTATTCCTGAACATGTTCTAGTAGTTGGAAGCCTTCAAATCAATTTGGATGGGCTACAGCCTGCTTCAACTTTTGAATGCAATAGAGGTTATGAGTATGGTGATTACCTCTGCTCTGTTGAAGAATTGGATGCTGTTTGCATGGATGTACCAGAGATCAAAGTTTTCAGGTTTTCGTGTAATGTTATGTGCTCCATATGGTTAAAGAGGCTGATGGAAGAGAAACTTGCGAGGAAACTAATTTTCTCAAAGGAATATTGGGAAGGCACAGCAGATATACTACCTCTTCTTGCCCGTTCTGGCTTCATTACTAGCAAGTATGAGATCCCTTCAGAGGATGATAATATTGAGGATATTTCGGTCCTGAAATTTCCGGATGGTGGTACTATACAGGCTTTACATAAACTACTTATTCATCATTGTGCACAATACAACTTGCCATTCCTTCTGGACCTTTACCTTGACCAGCACGAGTTGGTAGCAGATAGTGATTCAGTTTGTTCACTTCAGGAAGCCGCAGGAGATTGTCAATGGGCACGATGGTTGCTCCTCTCTAGGGTTAAAGGGTGTGAGTATGAAGCATCATTTTCCAATTCTCGCGCGATACTGTCACACAATCTAGTTCCGGATAGTAACCTCCGTGTTCCAGAGACGGATGAAATAATTCGTACTGTTGATGACATTGCAGAAGGAGGGGGAGAACTGGCAGCTCTGGCAACCTTAATGTATGCCTCTGCCCCCTTTCAAAGTTGTCTGAGTAGTGGCAGTGTAAAGAGGCATAGTAGTACATCAGCCCAGTGCACACTGGAGAATCTCAGGCCCACTCTTCAGCGTTTTCCTACACTGTGGCACACATTTGTATCAGCATGTTTCGGGCAAGATACAACTTCCAATCTTGTGGGGCCTAAAGCAAAGAATGGTTTTTCAGACTATTTAACATGGCGTGATGACATATTCTTCTCTTCTGGACGTGATACTTCACTTCTGCAAATGCTTCCATGCTGGTTTCCAAAGGCTGTGCGGAGGTTAATTCAGCTTTATGCTCAGGTCATGCCACTTGCAATTATGCATTTTGAGGATTCTGTGCTGGTGGCTTCATGCGCTTTTCTACTGGAGCTTTTCGGATTTTCTGCCAGCATGCTCCGCATAGACATTGCTGCCCTGAAACGGATGTCTTACTTTTACAAATCTAGTGACAATATTGACAACTTAAGGAAACTTTCGACAAAAGGGTCTGCATTTCATGCAGTTGGCCATGAAAGTGATATAATGGAGTCTCTGGCTCGAGCTCTAGCCGATGAGTATCTGCAGCAGGATAGTGCAAGCATGAGTAAGCAAAAGGGTACTCCAAGTTTAGCTGCTCGTAAACAACCTTCACGAGCTCTCATGCTTTTCTTAGAATTCATGGAGAAGGCTAGCCTTCCTCCAATGGCGGATGGGAAAACATGTGGGTCTTGGCTGTTATGTGGCGATGGTGATGGAATTGAGTTGAGATCTCAACAGAAAGCTGCAAGCCATCGCTGGAACTTAGTTACAATTTTCTGCCAGATGCACCACCTTCCCTTGAGCACAAGATATCTTTCTGTACTGGCAAGAGACAATGATTGGGTTGGCTTTTTGTCAGAAGCTCAGATTGGTGGATATCCTTTTGACACGGTGGTCCAAGTGGCGTCAAAGGACTTCAGTGATCCACGTCTTAAAATTCATATTTCAACAGTTCTGAAAGGCATGCAGTCAAGAAGAAAAGCTAGCTCTTCAACAAATACAGATACTATGGAAAAAAGGAGTGAAGCTTCCTTTACCAATGAAAGCATTTGTGTCCCAGTTGAGCTTTTTAGAATATTAGCAGAATGTGAAAAGCAGAAAAATCCTGGAGAGGCCATTTTGATGAAAGCAAAGGAGTTATCCTGGTCAATTTTGGCAATGATTGCATCATGCTTTTCAGATGTGTCTCCAATATCTTGCCTAACAGTCTGGCTGGAAATAACTGCTGCAAGGGAAACTTCATCTATCAAGGTGAATGATATTGCTTCCAGAATTGCAAATAATGTTGGAGCAGCTGTGGAAGCTACTAATGCTCTGCAAGCAGGAGGGAGTAAATCTCTTACATTTCATTACAATAGGCAGAATTCAAAGAGGAGGCGGCTTCTGGAACCCAACTCAGGAGATCCCTCAGCTGCTACAGCGTCTGAAATTTTGGATTCTCCTGTGGGTGCAAAAATATTTGATAACCAGCGAACTATTTCTGAAGGCGAAAGAAATATAAAACTTGGCGGAAATATGAATTTAGCTGATTCTGATGAAGTGTCTGTTTCGCTGTCCAAGATGGTTTCAGTGCTTTGTGAGCAACACCTGTTCCTGCCTTTGTTAAGGGCATTTGAAATGTTCCTTCCTTCATGTTCTCTCGTACCTTTCATACGTGCACTTCAGGCATTTTCACAAATGCGCCTTTCTGAAGCATCAGCGCATTTAGATTCCTTTTGTGCCCGAATTAAAGAAGAGTCGACTCGCTTACAGGCAAATGTAGGAAGAGATGTGCACATTGGTGCATCTTGGATAAGCTCTACGGCTATTAAAGCTGCGGATGCTATGCTTTTGACATGTCCATCTCCTTATGAAAAGAGATGCTTACTAAAACTCCTTGCTGCCACTGATTTTGGTGATGGAGGCTCCGCAGCTACTCATTACCAGCGGCTTCATTGGAAAATCAATTTAGCGGAGCCACTATTACGCAAGGATGATAATTTACACCTAGGGAATGAAACTCTAGATGATGGTGCACTTGCAACAGCATTGGAAAGTAATAGACACTGGGAGCAAGCACGCAACTGGGCGAGACAGTTGGAGGCCAGTGCTGGAGTTTGGAAATCTGCTGTTCATCATGTAACTGAAACTCAGGCTGAATCTATGGTAGCTGAGTGGAAGGAATTTCTTTGGGATGTTCCCGAGGAGAGAATCGCTTTATGGGGACATTGCCAAACCCTCTTCATCAGATATTCCTTCCCTGCTTTACAGGCTGGGCTATTTTTCCTCAAGCATGCAGAAGCTCTGGAAAAAGATCTTCCAGCTAGGGAGCTTCATGAGCTGTTACTGCTTTCACTACAATGGTTGAGCGGAATGATTACTCTGTCCAATCCAGTTTATCCACTTCATCTGATTCGGGAAATTGAGACTAGAGTATGGCTCTTGGCGGTAGAATCAGAGGCACAAGGTAAGAGTGAAGGAGACTTCAATCTAAGCAGTTCCATCCGTGATCCTATTCACAAAAATAGCTCCAGTATTATTGACAGAACAGCAAGTATCATAACAAAAATGGACAATCACATTGGTACATTTAAGAACAGAACTGTAGAGAAACATGATGCAAGGGAAAATAACCAGGTGTATCACAAGAACCAAGTATTAGATGTTAGCTTTCCAACCACAACAGCAGGGAGTACAAAGACTAAGCGAAGGGCAAAAGGCTATGTGCCATTACGACGGCCAGTACTAGACTCACCAGAAAAAAGCGGTGATCTTGATGAGGGTTCCAATTCTCTCAATGTGAGATATGAATTGCAGTCTCAGGATGAAAACTCAAAAACGGAAATGTCTTTTTCACGGTGGGAGGAAAGGGTTGGACCTGCAGAGCTGGAAAGGGCTGTTCTTTCTTTATTAGAATTTGGACAAATAGCTGCTGCAAAGCAACTCCAGCATAAGCTGTCTCCAGTAAAAGTACCATCTGAAATTTTACTTGTGGACGCCGCACTGAAGCTTGCTGCTATGTCAACTCCAAGTAAAAAAGTATCTATAGCAATGCTTGATGAAGAAGTACGTTCAGTTATTCAGTCCCACCATATTCTAACGCAGCAACATGAAGTTGATACAGTGCAGGTTTTGGAGAGTCTAGCAACCATTTTTACTGAAGGTAGCGGACGTGGACTATGCAAGAGGATAATAGCAGTCAACAAAGCAGCAAGCATGTTAGGTCTTCCATTTGCGGAGGCATTTGTTAAGCAGCCAATTGAACTACTACAGCTGCTTTCCCTTAAAGCACAAGAATCATTTGAGGAGGCACATCTCCTTGTCAGAACTCATTCAATGCCCGCAGCCAGTATTGCTCAGATTCTTTCCGAATCCTTTCTAAAGGGCTTATTGGCTGCTCATCGTGGGGGATATATGGATTCTCAAAAAGAAGAAGGACCTGCTCCCTTACTCTGGAGGTTTTCAGACTTCTTAAAGTGGGCAGAGCTTTGTCCTTCTGAACAAGAAATTGGGCATGCACTAATGCGCTTGGTTATTACTGGACAAGAAATACCACATGCCTGCGAGGTTGAGCTTCTAATTTTGTCACACCACTTCTACAAATTATCATCTTGCCTTGATGGAGTTGATGTACTTGTAGCCCTTGCAGCTACTAGAGTTGAAGCTTATGTGTCTGAGGGTGATTTTTCATGTTTGGCTCGTCTGATAACTGGAGTAGGAAACTTCCACGCCCTCAATTTCATTCTCGGAATTCTGATTGAAAATGGCCAACTGGATCTCCTTCTTCAGAAGTATTCAGCTGCTGCAGATGCGAATGCTGGCACTGCTGAGGCCGTCCGCGGATTTCGGATGGCTGTTCTGACATCATTGAAGCATTTTAATCCCAATGACCTTGATGCTTTTGCTATGGTCTATAATCACTTTGACATGAAACATGAAACGGCTGCTCTTTTGGAGTCACGAGCAGAGCAGTCATCAGAACAGTGGTTCTGTCGTTATGACAAGGATCAGAATGAGGACCTTCTAGACTCTATGCGTTATTACATTGAAGCTGCTGAAGTTCACAAATCCATTGATGCTGGCAACAAAACACGCAGAGCATGTGCTCAGGCCTCCCTCTTATCTCTTCAGATTCGAATGCCAGATTTCCACTGGCTGTACCGATCCGAAACCAATGCCAGGCGTGCCCTAGTTGAGCAGTCTCGTTTCCAAGAGGCCCTCATTGTTGCTGAAGCCTATGGTCTTAACCAGCCAAGTGAGTGGGCTTTGGTACTTTGGAACCAGATGCTCAAACCAGAAGTTCTGGAAGATTTTGTGGCTGAATTTGTGGCTGTTCTTCCTCTCCAGCCCTCAATGCTCATTGATCTAGCAAGGTTTTACAGGGCCGAGGTGGCAGCGAGAGGGGACCAGTCCCAGTTCTCAGTTTGGTTAACTGGGGGAGGGTTGCCAGCGGAATGGGCAAAATATCTGGGGAGGTCGTTTCGATGCTTGTTGAAAAGGACTAGAGATTTGAAGTTGAGGTTGCAGCTGGCTACTGTGGCAACTGGTTTTGGAGATGTTATTGATGCATGCACGAAGGCGTTAGATAGGGTGCCTGAGAATGTAGGACCTCTTGTCCTGAGGAAAGGCCACGGTGGTGCTTATCTACCACTAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Spatacsin_C

Protein Analysis

3115

Amino Acids

348.09

Weight (kDa)

5.65

Isoelectric Point (pI)

49.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spatacsin_C PF14649 2733 - 3024 1.8e-72 Spatacsin C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AasI GACNNNNNNGTC 2 cut(s) 5176, 5603
Acc16I TGCGCA 1 cut(s) 1919
Acc36I ACCTGC 3 cut(s) 7576, 7807, 8137
AccB1I GGYRCC 1 cut(s) 9280
AccB7I CCANNNNNTGG 1 cut(s) 1253
AccBSI CCGCTC 1 cut(s) 7059
AccI GTMKAC 1 cut(s) 6449
AccII CGCG 3 cut(s) 4545, 4547, 8529
AccIII TCCGGA 3 cut(s) 18, 4318, 4570
AcoI YGGCCR 4 cut(s) 3375, 5197, 7427, 8455
AcyI GRCGYC 2 cut(s) 5615, 7686
AfeI AGCGCT 1 cut(s) 2389
AflII CTTAAG 2 cut(s) 3416, 5155
AflIII ACRYGT 4 cut(s) 1495, 3958, 5390, 6545
AgeI ACCGGT 1 cut(s) 2743
AhdI GACNNNNNGTC 1 cut(s) 9302
AhlI ACTAGT 1 cut(s) 1142
AjiI CACGTC 3 cut(s) 4916, 5639, 7862
AjuI GAANNNNNNNTTGG 4 cut(s) 5562, 5594, 8181, 8213
AleI CACNNNNGTG 3 cut(s) 6489, 9324, 9343
Alw44I GTGCAC 5 cut(s) 4368, 4744, 6366, 6482, 6723
AlwNI CAGNNNCTG 4 cut(s) 260, 1663, 6134, 8492
Ama87I CYCGRG 2 cut(s) 5229, 6890
Aor13HI TCCGGA 3 cut(s) 18, 4318, 4570
Aor51HI AGCGCT 1 cut(s) 2389
ApaI GGGCCC 1 cut(s) 86
ApaLI GTGCAC 5 cut(s) 4368, 4744, 6366, 6482, 6723
ArsI GACNNNNNNTTYG 4 cut(s) 3435, 3467, 9181, 9213
AsiGI ACCGGT 1 cut(s) 2743
Asp700I GAANNNNTTC 8 cut(s) 237, 945, 3593, 3960, 4608, 6187, 8020, 8064
AspA2I CCTAGG 1 cut(s) 6697
AspLEI GCGC 8 cut(s) 1920, 2390, 3645, 4547, 5048, 6393, 6412, 8217
AsuC2I CCSGG 1 cut(s) 815
AsuII TTCGAA 2 cut(s) 2815, 8824
AsuNHI GCTAGC 2 cut(s) 5360, 5693
AvaI CYCGRG 2 cut(s) 5229, 6890
AvrII CCTAGG 1 cut(s) 6697
AxyI CCTNAGG 2 cut(s) 3188, 9308
BaeGI GKGCMC 9 cut(s) 86, 4372, 4483, 4748, 6370, 6433, 6486, 6727, 8878
BaeI ACNNNNGTAYC 2 cut(s) 4788, 4821
BalI TGGCCA 3 cut(s) 3377, 5199, 8457
BamHI GGATCC 1 cut(s) 21
BanI GGYRCC 1 cut(s) 9280
BanII GRGCYC 3 cut(s) 86, 5236, 5329
BarI GAAGNNNNNNTAC 4 cut(s) 2526, 2558, 5302, 5334
BauI CACGAG 5 cut(s) 1826, 3102, 4415, 5322, 8649
BbsI GAAGAC 2 cut(s) 230, 7907
BbvCI CCTCAGC 2 cut(s) 6118, 8517
BceAI ACGGC 5 cut(s) 3599, 6528, 7442, 8507, 8646
BcgI CGANNNNNNTGC 2 cut(s) 8846, 8880
BciVI GTATCC 2 cut(s) 1850, 1951
BclI TGATCA 2 cut(s) 1876, 3817
BcnI CCSGG 1 cut(s) 815
BcuI ACTAGT 1 cut(s) 1142
BfoI RGCGCY 1 cut(s) 2391
BfrI CTTAAG 2 cut(s) 3416, 5155
BfuAI ACCTGC 3 cut(s) 7576, 7807, 8137
BfuI GTATCC 2 cut(s) 1850, 1951
BglI GCCNNNNNGGC 1 cut(s) 9080
BglII AGATCT 3 cut(s) 356, 5438, 7003
BlnI CCTAGG 1 cut(s) 6697
BmcAI AGTACT 1 cut(s) 7434
BmeRI GACNNNNNGTC 1 cut(s) 9302
BmeT110I CYCGRG 2 cut(s) 5229, 6890
BmgBI CACGTC 3 cut(s) 4916, 5639, 7862
BmrI ACTGGG 9 cut(s) 1929, 3793, 3928, 4735, 5762, 6766, 6784, 9097, 9132
BmtI GCTAGC 2 cut(s) 5364, 5697
BmuI ACTGGG 9 cut(s) 1929, 3793, 3928, 4735, 5762, 6766, 6784, 9097, 9132
BoxI GACNNNNGTC 1 cut(s) 1242
BpiI GAAGAC 2 cut(s) 230, 7907
Bpu10I CCTNAGC 5 cut(s) 3232, 4989, 6118, 8517, 8796
Bpu14I TTCGAA 2 cut(s) 2815, 8824
BpuEI CTTGAG 5 cut(s) 1063, 1443, 3914, 5530, 6962
BpuMI CCSGG 1 cut(s) 815
BsaAI YACGTR 1 cut(s) 6365
BsaBI GATNNNNATC 2 cut(s) 1861, 5247
BsaHI GRCGYC 2 cut(s) 5615, 7686
BsaI GGTCTC 1 cut(s) 3116
BsaJI CCNNGG 9 cut(s) 2116, 2164, 2336, 2345, 6697, 6891, 8527, 9075, 9319
BsaWI WCCGGW 7 cut(s) 18, 509, 1126, 1615, 2743, 4318, 4570
Bse118I RCCGGY 1 cut(s) 2743
Bse21I CCTNAGG 2 cut(s) 3188, 9308
Bse3DI GCAATG 9 cut(s) 538, 1350, 2599, 3380, 4626, 5097, 5874, 6916, 7746
Bse8I GATNNNNATC 2 cut(s) 1861, 5247
BseAI TCCGGA 3 cut(s) 18, 4318, 4570
BseDI CCNNGG 9 cut(s) 2116, 2164, 2336, 2345, 6697, 6891, 8527, 9075, 9319
BseJI GATNNNNATC 2 cut(s) 1861, 5247
BseMI GCAATG 9 cut(s) 538, 1350, 2599, 3380, 4626, 5097, 5874, 6916, 7746
BseRI GAGGAG 6 cut(s) 731, 3485, 4484, 6097, 6908, 8009
BseSI GKGCMC 9 cut(s) 86, 4372, 4483, 4748, 6370, 6433, 6486, 6727, 8878
BseYI CCCAGC 2 cut(s) 3551, 6962
BsgI GTGCAG 1 cut(s) 7835
Bsh1236I CGCG 3 cut(s) 4545, 4547, 8529
Bsh1285I CGRYCG 1 cut(s) 2404
BshNI GGYRCC 1 cut(s) 9280
BshTI ACCGGT 1 cut(s) 2743
BsiEI CGRYCG 1 cut(s) 2404
BsiHKCI CYCGRG 2 cut(s) 5229, 6890
BsiSI CCGG 8 cut(s) 19, 510, 815, 1127, 1616, 2744, 4319, 4571
BslFI GGGAC 9 cut(s) 359, 672, 2441, 3041, 5750, 6927, 7759, 9085, 9107
BsmBI CGTCTC 2 cut(s) 3436, 4589
BsmFI GGGAC 9 cut(s) 359, 672, 2441, 3041, 5750, 6927, 7759, 9085, 9107
BsmI GAATGC 3 cut(s) 4028, 8509, 8832
Bso31I GGTCTC 1 cut(s) 3116
BsoBI CYCGRG 2 cut(s) 5229, 6890
Bsp119I TTCGAA 2 cut(s) 2815, 8824
Bsp120I GGGCCC 1 cut(s) 82
Bsp13I TCCGGA 3 cut(s) 18, 4318, 4570
Bsp1407I TGTACA 1 cut(s) 1056
Bsp19I CCATGG 1 cut(s) 2345
BspEI TCCGGA 3 cut(s) 18, 4318, 4570
BspFNI CGCG 3 cut(s) 4545, 4547, 8529
BspHI TCATGA 3 cut(s) 949, 3292, 7024
BspMAI CTGCAG 5 cut(s) 1070, 2460, 5256, 7573, 8497
BspMI ACCTGC 3 cut(s) 7576, 7807, 8137
BspOI GCTAGC 2 cut(s) 5364, 5697
BspQI GCTCTTC 2 cut(s) 3319, 5704
BspT104I TTCGAA 2 cut(s) 2815, 8824
BspT107I GGYRCC 1 cut(s) 9280
BspTI CTTAAG 2 cut(s) 3416, 5155
BspTNI GGTCTC 1 cut(s) 3116
BsrBI CCGCTC 1 cut(s) 7059
BsrDI GCAATG 9 cut(s) 538, 1350, 2599, 3380, 4626, 5097, 5874, 6916, 7746
BsrFI RCCGGY 1 cut(s) 2743
BsrGI TGTACA 1 cut(s) 1056
BssAI RCCGGY 1 cut(s) 2743
BssECI CCNNGG 9 cut(s) 2116, 2164, 2336, 2345, 6697, 6891, 8527, 9075, 9319
BssNI GRCGYC 2 cut(s) 5615, 7686
BssSI CACGAG 5 cut(s) 1826, 3102, 4415, 5322, 8649
BssT1I CCWWGG 3 cut(s) 2336, 2345, 6697
Bst2BI CACGAG 5 cut(s) 1826, 3102, 4415, 5322, 8649
BstACI GRCGYC 2 cut(s) 5615, 7686
BstAFI CTTAAG 2 cut(s) 3416, 5155
BstAPI GCANNNNNTGC 2 cut(s) 5189, 5873
BstAUI TGTACA 1 cut(s) 1056
BstBAI YACGTR 1 cut(s) 6365
BstBI TTCGAA 2 cut(s) 2815, 8824
BstDSI CCRYGG 4 cut(s) 2116, 2345, 8527, 9319
BstEII GGTNACC 1 cut(s) 2340
BstFNI CGCG 3 cut(s) 4545, 4547, 8529
BstH2I RGCGCY 1 cut(s) 2391
BstHHI GCGC 8 cut(s) 1920, 2390, 3645, 4547, 5048, 6393, 6412, 8217
BstMCI CGRYCG 1 cut(s) 2404
BstPAI GACNNNNGTC 1 cut(s) 1242
BstPI GGTNACC 1 cut(s) 2340
BstSLI GKGCMC 9 cut(s) 86, 4372, 4483, 4748, 6370, 6433, 6486, 6727, 8878
BstUI CGCG 3 cut(s) 4545, 4547, 8529
BstV2I GAAGAC 2 cut(s) 230, 7907
BstXI CCANNNNNNTGG 3 cut(s) 4843, 8949, 9144
Bsu36I CCTNAGG 2 cut(s) 3188, 9308
BsuI GTATCC 2 cut(s) 1850, 1951
BtgI CCRYGG 4 cut(s) 2116, 2345, 8527, 9319
BtgZI GCGATG 2 cut(s) 5430, 5447
BtrI CACGTC 3 cut(s) 4916, 5639, 7862
BtsI GCAGTG 3 cut(s) 2154, 4717, 8511
BveI ACCTGC 3 cut(s) 7576, 7807, 8137
CaiI CAGNNNCTG 4 cut(s) 260, 1663, 6134, 8492
CciI TCATGA 3 cut(s) 949, 3292, 7024
CfoI GCGC 8 cut(s) 1920, 2390, 3645, 4547, 5048, 6393, 6412, 8217
Cfr10I RCCGGY 1 cut(s) 2743
Cfr42I CCGCGG 1 cut(s) 8530
CseI GACGC 4 cut(s) 2438, 5604, 6120, 7694
CsiI ACCWGGT 2 cut(s) 806, 7323
CspAI ACCGGT 1 cut(s) 2743
CspCI CAANNNNNGTGG 6 cut(s) 545, 580, 2626, 2661, 6583, 6618
DraI TTTAAA 1 cut(s) 1525
DrdI GACNNNNNNGTC 2 cut(s) 5176, 5603
DriI GACNNNNNGTC 1 cut(s) 9302
DseDI GACNNNNNNGTC 2 cut(s) 5176, 5603
EaeI YGGCCR 4 cut(s) 3375, 5197, 7427, 8455
Eam1105I GACNNNNNGTC 1 cut(s) 9302
EciI GGCGGA 2 cut(s) 5393, 6234
Ecl136II GAGCTC 2 cut(s) 5234, 5327
Eco130I CCWWGG 3 cut(s) 2336, 2345, 6697
Eco147I AGGCCT 1 cut(s) 8801
Eco24I GRGCYC 3 cut(s) 86, 5236, 5329
Eco31I GGTCTC 1 cut(s) 3116
Eco32I GATATC 4 cut(s) 1737, 3528, 5522, 5588
Eco47III AGCGCT 1 cut(s) 2389
Eco53kI GAGCTC 2 cut(s) 5234, 5327
Eco81I CCTNAGG 2 cut(s) 3188, 9308
Eco88I CYCGRG 2 cut(s) 5229, 6890
Eco91I GGTNACC 1 cut(s) 2340
EcoICRI GAGCTC 2 cut(s) 5234, 5327
EcoO65I GGTNACC 1 cut(s) 2340
EcoRI GAATTC 7 cut(s) 1209, 1750, 3593, 3603, 5345, 6073, 8439
EcoRV GATATC 4 cut(s) 1737, 3528, 5522, 5588
EcoT14I CCWWGG 3 cut(s) 2336, 2345, 6697
EcoT22I ATGCAT 6 cut(s) 2174, 2698, 3772, 3907, 5016, 9259
EcoT38I GRGCYC 3 cut(s) 86, 5236, 5329
ErhI CCWWGG 3 cut(s) 2336, 2345, 6697
Esp3I CGTCTC 2 cut(s) 3436, 4589
FaqI GGGAC 9 cut(s) 359, 672, 2441, 3041, 5750, 6927, 7759, 9085, 9107
FauI CCCGC 1 cut(s) 8038
FauNDI CATATG 2 cut(s) 2698, 4142
FbaI TGATCA 2 cut(s) 1876, 3817
FblI GTMKAC 1 cut(s) 6449
FriOI GRGCYC 3 cut(s) 86, 5236, 5329
FspI TGCGCA 1 cut(s) 1919
GlaI GCGC 8 cut(s) 1919, 2389, 3644, 4546, 5047, 6392, 6411, 8216
GsaI CCCAGC 2 cut(s) 3555, 6966
HaeII RGCGCY 1 cut(s) 2391
HapII CCGG 8 cut(s) 19, 510, 815, 1127, 1616, 2744, 4319, 4571
HgaI GACGC 4 cut(s) 2438, 5604, 6120, 7694
HhaI GCGC 8 cut(s) 1920, 2390, 3645, 4547, 5048, 6393, 6412, 8217
Hin1I GRCGYC 2 cut(s) 5615, 7686
Hin6I GCGC 8 cut(s) 1918, 2388, 3643, 4545, 5046, 6391, 6410, 8215
HinP1I GCGC 8 cut(s) 1918, 2388, 3643, 4545, 5046, 6391, 6410, 8215
HincII GTYRAC 8 cut(s) 388, 2278, 2899, 3667, 6450, 7713, 7891, 9120
HindII GTYRAC 8 cut(s) 388, 2278, 2899, 3667, 6450, 7713, 7891, 9120
HindIII AAGCTT 5 cut(s) 1232, 1883, 5736, 7697, 8352
HpaI GTTAAC 2 cut(s) 388, 9120
HpaII CCGG 8 cut(s) 19, 510, 815, 1127, 1616, 2744, 4319, 4571
Hpy99I CGWCG 3 cut(s) 2454, 2653, 7428
HpyCH4IV ACGT 7 cut(s) 3318, 3726, 4915, 5638, 6364, 7759, 7861
HpySE526I ACGT 7 cut(s) 3318, 3726, 4915, 5638, 6364, 7759, 7861
Hsp92I GRCGYC 2 cut(s) 5615, 7686
HspAI GCGC 8 cut(s) 1918, 2388, 3643, 4545, 5046, 6391, 6410, 8215
Kpn2I TCCGGA 3 cut(s) 18, 4318, 4570
Ksp22I TGATCA 2 cut(s) 1876, 3817
KspAI GTTAAC 2 cut(s) 388, 9120
KspI CCGCGG 1 cut(s) 8530
LguI GCTCTTC 2 cut(s) 3319, 5704
MabI ACCWGGT 2 cut(s) 806, 7323
MaeII ACGT 7 cut(s) 3318, 3726, 4915, 5638, 6364, 7759, 7861
MbiI CCGCTC 1 cut(s) 7059
MfeI CAATTG 2 cut(s) 2934, 7947
MlsI TGGCCA 3 cut(s) 3377, 5199, 8457
MluNI TGGCCA 3 cut(s) 3377, 5199, 8457
MmeI TCCRAC 9 cut(s) 936, 1021, 3146, 3301, 3952, 5977, 6768, 7388, 7543
Mox20I TGGCCA 3 cut(s) 3377, 5199, 8457
Mph1103I ATGCAT 6 cut(s) 2174, 2698, 3772, 3907, 5016, 9259
MroI TCCGGA 3 cut(s) 18, 4318, 4570
MroXI GAANNNNTTC 8 cut(s) 237, 945, 3593, 3960, 4608, 6187, 8020, 8064
MscI TGGCCA 3 cut(s) 3377, 5199, 8457
MslI CAYNNNNRTG 9 cut(s) 435, 3866, 4365, 5205, 5831, 6489, 7048, 9324, 9343
Msp20I TGGCCA 3 cut(s) 3377, 5199, 8457
MspA1I CMGCKG 8 cut(s) 6005, 6122, 6637, 7963, 8489, 8529, 9140, 9217
MspCI CTTAAG 2 cut(s) 3416, 5155
MspI CCGG 8 cut(s) 19, 510, 815, 1127, 1616, 2744, 4319, 4571
MunI CAATTG 2 cut(s) 2934, 7947
Mva1269I GAATGC 3 cut(s) 4028, 8509, 8832
MvnI CGCG 3 cut(s) 4545, 4547, 8529
NciI CCSGG 1 cut(s) 815
NcoI CCATGG 1 cut(s) 2345
NdeI CATATG 2 cut(s) 2698, 4142
NheI GCTAGC 2 cut(s) 5360, 5693
NmeAIII GCCGAG 2 cut(s) 3411, 9100
NmuCI GTSAC 7 cut(s) 1905, 2340, 3314, 4554, 5138, 8274, 8646
NsbI TGCGCA 1 cut(s) 1919
NsiI ATGCAT 6 cut(s) 2174, 2698, 3772, 3907, 5016, 9259
NspV TTCGAA 2 cut(s) 2815, 8824
OliI CACNNNNGTG 3 cut(s) 6489, 9324, 9343
PaeI GCATGC 8 cut(s) 933, 2057, 3909, 5086, 5677, 6986, 8207, 9261
PaeR7I CTCGAG 1 cut(s) 5229
PagI TCATGA 3 cut(s) 949, 3292, 7024
PceI AGGCCT 1 cut(s) 8801
PciI ACATGT 4 cut(s) 1495, 3958, 5390, 6545
PciSI GCTCTTC 2 cut(s) 3319, 5704
PcsI WCGNNNNNNNCGW 1 cut(s) 3451
PctI GAATGC 3 cut(s) 4028, 8509, 8832
PdmI GAANNNNTTC 8 cut(s) 237, 945, 3593, 3960, 4608, 6187, 8020, 8064
PflFI GACNNNGTC 1 cut(s) 1021
PflMI CCANNNNNTGG 1 cut(s) 1253
PfoI TCCNGGA 4 cut(s) 813, 1788, 3939, 5815
PinAI ACCGGT 1 cut(s) 2743
Ple19I CGATCG 1 cut(s) 2404
Ppu21I YACGTR 1 cut(s) 6365
PpuMI RGGWCCY 5 cut(s) 2428, 2712, 8126, 8707, 9296
PscI ACATGT 4 cut(s) 1495, 3958, 5390, 6545
PshAI GACNNNNGTC 1 cut(s) 1242
PsiI TTATAA 1 cut(s) 423
Psp124BI GAGCTC 2 cut(s) 5236, 5329
Psp5II RGGWCCY 5 cut(s) 2428, 2712, 8126, 8707, 9296
PspEI GGTNACC 1 cut(s) 2340
PspFI CCCAGC 2 cut(s) 3551, 6962
PspOMI GGGCCC 1 cut(s) 82
PspPPI RGGWCCY 5 cut(s) 2428, 2712, 8126, 8707, 9296
PspXI VCTCGAGB 1 cut(s) 5229
PstI CTGCAG 5 cut(s) 1070, 2460, 5256, 7573, 8497
PstNI CAGNNNCTG 4 cut(s) 260, 1663, 6134, 8492
PsyI GACNNNGTC 1 cut(s) 1021
PvuI CGATCG 1 cut(s) 2404
PvuII CAGCTG 5 cut(s) 6005, 6122, 7963, 8489, 9217
RseI CAYNNNNRTG 9 cut(s) 435, 3866, 4365, 5205, 5831, 6489, 7048, 9324, 9343
SacI GAGCTC 2 cut(s) 5236, 5329
SacII CCGCGG 1 cut(s) 8530
SalI GTCGAC 1 cut(s) 6448
SapI GCTCTTC 2 cut(s) 3319, 5704
ScaI AGTACT 1 cut(s) 7434
SexAI ACCWGGT 2 cut(s) 806, 7323
Sfr274I CTCGAG 1 cut(s) 5229
Sfr303I CCGCGG 1 cut(s) 8530
SfuI TTCGAA 2 cut(s) 2815, 8824
SgrAI CRCCGGYG 1 cut(s) 2743
SgrBI CCGCGG 1 cut(s) 8530
SlaI CTCGAG 1 cut(s) 5229
SmiMI CAYNNNNRTG 9 cut(s) 435, 3866, 4365, 5205, 5831, 6489, 7048, 9324, 9343
SmlI CTYRAG 8 cut(s) 1078, 1458, 3416, 3893, 5155, 5229, 5509, 6977
SmoI CTYRAG 8 cut(s) 1078, 1458, 3416, 3893, 5155, 5229, 5509, 6977
SpeI ACTAGT 1 cut(s) 1142
SphI GCATGC 8 cut(s) 933, 2057, 3909, 5086, 5677, 6986, 8207, 9261
SseBI AGGCCT 1 cut(s) 8801
SstI GAGCTC 2 cut(s) 5236, 5329
StuI AGGCCT 1 cut(s) 8801
StyI CCWWGG 3 cut(s) 2336, 2345, 6697
TaiI ACGT 7 cut(s) 3321, 3729, 4918, 5641, 6367, 7762, 7864
TaqII GACCGA 1 cut(s) 4294
TatI WGTACW 8 cut(s) 1056, 1177, 2542, 4730, 5530, 7382, 7432, 8320
TauI GCSGC 5 cut(s) 2564, 4463, 6091, 6640, 7691
TseFI GTSAC 7 cut(s) 1905, 2340, 3314, 4554, 5138, 8274, 8646
Tsp45I GTSAC 7 cut(s) 1905, 2340, 3314, 4554, 5138, 8274, 8646
TspGWI ACGGA 6 cut(s) 3302, 4574, 4613, 5128, 7184, 7544
Tth111I GACNNNGTC 1 cut(s) 1021
Van91I CCANNNNNTGG 1 cut(s) 1253
Vha464I CTTAAG 2 cut(s) 3416, 5155
VneI GTGCAC 5 cut(s) 4368, 4744, 6366, 6482, 6723
XbaI TCTAGA 4 cut(s) 3181, 3932, 6712, 8713
XcmI CCANNNNNNNNNTGG 1 cut(s) 8838
XhoI CTCGAG 1 cut(s) 5229
XmaJI CCTAGG 1 cut(s) 6697
XmiI GTMKAC 1 cut(s) 6449
XmnI GAANNNNTTC 8 cut(s) 237, 945, 3593, 3960, 4608, 6187, 8020, 8064
ZrmI AGTACT 1 cut(s) 7434
Zsp2I ATGCAT 6 cut(s) 2174, 2698, 3772, 3907, 5016, 9259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.