Rh2CG270200

phagosome-lysosome fusion involved in apoptotic cell clearance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0003216
Physical Location & Seq
Forward (+)
29343117 .. 29368908
25792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG270200.1

Sequence Viewer

Length: 9693 bp
ATGCATGTTGTACCTTGGGGTGTGGAGATTCGATGCTTAGTCCGTACAACTTTCCGGATCAAAATGGATTTGTCTGTGGGTGATAAAGGACTTGCTACACTTCAGTTGCTCAAATGGGGCCCTTCTCAGCCCCAACTAAACTTGTCAGAATTTCGTGAAGCCTTCATTTCACCTACAAGACAGTTATTATTATTGCTTTCGTATCAGTGTGAGGCTTTATTGTTTCCTCTAATTACAGGTAGTAATAATTTGGAGTGTAATATTGATGAAAGTCTTCAAAGTCCAGAGACAGAGCCTGGTAGGTCAGATTCAATAAGGGACGATTTGCCATGCACATCTGGATCATTAGGAGATGTTGATAATGATTTGAGTTTTGGAGGGGACAGTTTAAGATCTAAAAGTTACCCTTTTGTTGGTGATGTTAACTCTCTGGCTTGGGGCGTTTGTGAGGACACTTATAATCAGCACAAGGATGCTTTATTTAGAGAGCTTTTGTTTGTGTGTGGCAAGCAAGGTATTATGGTCCATGCTTTTGTTGAATCTACCGGAAATACTGCAACTACCAGCAATGCACGGGAAGGTGGGTATGGGCAAGGGAGGTGGGTTGAGTGGGGGCCTTCTGCTTCTTTAATTGGAAATATGGAGGTGGAGGAACCTACCAGCTTGAGTTCTGAAGCTACTGGAAATATTGAATTTAACAAATCCAATGGAAACAGTGAAAGTCCCCATATTTGTAATGTGGATGGGAATGAGGAGTTCTCAAAAAGTGTTGCTTCTAAAAGATGGTTGCAATCTTTTTTGACTAAAGTTGAAAATGTTGAATATAATGGTAAAATATTGACCAGGTTCCCGGAAAAGTCATTGTTGCCTAGCTCTGCAAGAGTTGTTTCATTTAGTTTATTTAATAGTAATTCGCCAATTTTGGACTACCTTTCAAACAATGATTCTGCATCAGATAAGGCGTGCGGTCAGGAAACAGTTCATGTGTTGGAGAGTGATAAATCTCTGAAATTAGACATAACTTCATCTGATCCACATTTCAAGTCTGAGACTTTGTCCAATCTTTTAGGTGTTGGAATGAATAGTGTGTACAAATGCTGCAGAGTGTTCTCAAGCAATTCTCATTACTTCATTGGATTTGTTTTCACACAGGTTGATCCGGTAATTGTCAATACTAGTGATGAAAGTGGAAAAAGCAAGAAGAATAATGTACTGCTTATTGCTAGATTAGACCACATGGGAATTCATTGGGTTTCCTCAGTGAAGCTTGACGAAAGTCCAAATATTGGCTCAGTAGCACAATGGACAGACTTCCACTTTTCTGATAAACTTCTTGTTTGTCTTAATGCTTGTGGGCTAATTGTATTTTATGCAGCAATGTCAGGTGAGTATGTTGCGCATATAGATATTTTACAAACTTTAGGACTCAACTCTGAGTTGCATTTGCAGAAGCAGGAAGCAGTTTCCACAGGTTATGATAAGCATATTACTCAAGTTGATGACATTCAGAACAAATCAGTTTTGCAACATGTTGATTATTCTGGCAGGAGACTGTTTAAAAGGTTGATTTCTGCTTCACATACCTCTCTAGTAGCTGCTATTGATGATTATGGTGTAATATATGTGGTTTCTGCTGGTGAATATCTACCGGACAAATATTATACAAATGCGAAACTACTTCCACATATTCAGCATCTGGAACTTGGTATGTTGGCTGGTTGGGAGGTTGGTGGTTCTGATATAAGCCACCAGAGGGTATATTCTGACATATCTGGTTTGTGGAATTCTATCATTCCATCCATGATGAAAGGAAGATCCTTCCTGGATGGCTCTGGGAAACAAGTGCTTCAGAGAAACCACGAGTTATACCTCAAACAAGAAGGGATTGGATACAGATCAGAAGTAACTGATCAGAAGCTTGATGACTCTCACAGAAAGTCACACCTTATGCGCAGGATCTTTGTTCCCAGTTACAGATTTAGTGAGAAGGATACTATCTGTTTTTCTCCATTGGGAATTACTCAGCTTATGAAGAACCAAAATTTGCACGATCAGAGGGGTTCTCAAATTGTTCATCTCAATCTGCATGCAGAATCAGCAGTTCGTGATGACAGCTTTTTGAATACTGGTTGTAAAAAGGTTTATCTCCACGGGAAAGAAGAATCCTTTATTGATGAGGCAGTGGGTTGCACATTCCAGGGATGCATTTATTTGGTTACAGTAAGTGGACTTTCAGTGGTGCTTCCCTCTATAGCAGTTTCATCAAATTTTCTTCCCGTAGAAGTTATTGGATGTCGGCAGTTGTGTGTCAACTCAGGCATTGGTTATCAAGTGAAAGATATAAGGGAAGCTAAAGAATCTAAACAGCCTTGGTCACCATGGAATGTTGAAATTATGGACAGAGTTATCCTATATGAAAGCGCTGAAGAAGCCGATCGCTTGTGCTTGGAGAATGGTTGGGACCTGAAAATATCTCGGATGCGTCGGCTGCAGTTGGCACTGGATTACTTGAAATTTGATGAGATAGAGCGATCATTAGAAAACCTTGTGGGTGTCAATTTGGCAGAAGAGGGTGTACTGAGATTGCTATTTGCGGCTGTTTATCTGATGCTTCGTAAAGTTGGCAATGATAATGAGGTTTCTGCTGCATCAAGGCTTCTTGCATTAGCCACTTTTTTTGCGACGAAAATGATTCGCAAGTATTGGTTGCTAGAACATAGGAAAGATGCATATGAATCTGGTAGGACCCAAATTCTCTCTCTTCCACCAGTTTCACCGGTGAAGGAAGAAGATGAAATGGCAAATTCAAGGAGGCTTCGTGAGATGGCTCACTTTTTGGAGATAATTCGAAATCTGCAATCTCGACTTGGTTCCAAGTATAAGAGGCCAGGCCAAGAATCGAACGAATCTCAGCTATCAATTGTATCTGTGGACACTATATCTTTGGAGACATCAAAACAGCATGAAGTTTCTTTCCCTGTATCGACATCAGGATTTAACTATACTGATAATCTTGCTTTAACACCTATGGATTCTAAAGTCCCTTTGGACCCAGAGGATTTAAGTGAAGTATCTGCTCTTGTGCCACGAGGGGGTCTCTTAGAGAAGAAAATTCTTCCCTTAGAGAATCCGAAAGAGATGATTGCTCGTTGGAAGATAGATAATCTAGACCTTAGGGCTGTAGTCAGTGATGCTTTACTCTCTGGTCGTCTGCCCTTAGCAGTTCTTCAACTACATCTTCACCGTTCAAGAGATTCATTTTCTGGAAAGGAGCCTCATGATACTTTCACTGAAGTCCGTGACGTTGGAAGAGCTATTGCTTATGACCTATTTTTGAAGGGTGAATCTGGACTTGCTGTGGCCACATTGCAAAGGCTCGGAGAGGATGTAGAAACCAGCCTTAAGCAGTTATTACTCGGCACAGTGAGACGATCTCTTCGAGTGCAAATCACTGAGGAGATGAATAAATATGGTTATCTGGGATCTTATGAGTGGAAGATATTGGATAGGATATCACTTATTGAGAGGCTATACCCCAGCAGTAGTTTTTGGAAAACGCTTCATGGACGGCAGAAAGAATTCACTCGAATTCCAGCAAGTTCCAGTTTGCCCAAGAGATATTATTTGCGCCTACTGGATTCACCTGTAGTCAACAATTTTACCATCGAGTGTGATGAAATTGATGGAGTTGTTTTTGGTTCATGGACAAACGTAAATGAAAATCCTTCTGGTCCTATGGTTGATGAAGATAATGCATACGCTGGTTACTGGGCTGCTGCTGCTGTATGGTTTAGTTTCTATGATCAAAGAACTGTTGATCGAATTGTTTTGGATCAGTCATCTTTCATGGGTGTGCATGTATTGTGGGAATCACAGCTTGAGTACCATGCATGCCACAATGACTGGGAGGAAGTCTCTAGACTCCTGGACCTTATTCCTGAACATGTTCTAGTAGTTGGAAGCCTTCAAATCAATTTGGATGGGGTACAGCCTGCTTCAACTTTTGAATGCAATAGAGGTTATGAGTATGGTGATTACCTCTGCTCTTTTGAAGAATTGGATGCTGTTTGCATGGATGTACCAGAGATCAAAGTTTTCAGGTTTTCGTGTAATGTTATGTGCTCCATATGGTTAAAGAGGCTGATGGAAGAGAAACTTGCGAGGAAACTAATTTTCTCAAAGGAATATTGGGAAGGCACAGCAGATATACTACCTCTTCTTGCCCGTTCTGGCTTCATTACTAGCAAGTATGAGATCCCTTCAGAGGATGATAATATTGAGGATATTTCGGTCCTGAAATTTCCGGATGGTGGAACTATACAGGCTTTACATAAACTACTTATTCATCATTGTGCACAATACAACTTGCCATTCCTTCTGGACCTTTACCTTGACCAGCACGAGTTGGTAGCAGATAGTGATTCAGTTCGTTCACTTCAGGAAGCCGCAGGAGATTGTCAATGGGCACGATGGTTGCTCCTCTCTAGGGTTAAAGGGTGTGAGTATGAAGCATCATTTTCCAATTCTCGCGCGATACTGTCACACAATCTAGTTCCGGATAGTAACCTCCGTGTTCCAGAGACGGATGAAATAATTCGTACTGTTGATGACATTGCAGAAGGAGGGGGAGAACTGGCAGCTCTGGCAACCTTAATGTATGCCTCTGCCCCCTTTCAAAGTTGTCTGAGTAGTGGCAGTGTAAAGAGGCATAGTAGTACATCAGCCCAGTGCACACTGGAGAATCTCAGGCCCACTCTTCAGCGTTTTCCTACACTGTGGCACACATTTGTATCAGCATGTTTCGGGCAAGATACAACTTCCAATCTTGTGGGGCCTAAAGCAAAGAATGGTTTTTCAGACTATTTAACATGGCGTGATGACATATTCTTCTCTTCTGGACGTGATACTTCACTTCTGCAAATGCTTCCATGCTGGTTTCCAAAGGCTGTGCGGAGGTTAATTCAGCTTTATGCTCAGGGTCCTCTTGGATGGCAATCAATAGCAGGTCTGCCTGTGGGAGAAGGTCTGCTGCAAAGAGATATAGAATTTGTCCTAAACACTGATGAGGATGTAGAAATCAGCTCACTCTCCTGGGAAGCAACTATCCAAAAACACATTGAGGAGGAACTCTACAATTCTGCACTTGAGGGAAATGCACTTGGGCTTGAACACCATTTACATCGTGGACGTGCATTAGCTGCTTTTAATCATTTTCTTGGTTTTAGAGTTCAAAAATTGAAATCAGAAGGAAAAGGACAAATACAAGCAAATGTTCAAGCAGATGTTCAGACACTTCTTGGACCTATAACAGAAAGTGAAGAGTCTCTTCTTTCATCAGTCATGCCACTTGCAATTATGCATTTTGAGGATTCTGTGCTGGTGGCTTCATGCGCTTTTCTACTGGAGCTTTTCGGATTTTCTGCCAGCATGCTCCGCATAGACATTGCTGCCCTGAAACGGATGTCTTACTTTTACAAATCTAGTGACAATATTGACAACTTAAGGAAACTTTCGACAAAAGGGTCTGCATTTCATGCAGTTGGCCATGAAAGTGATATAATGGAGTCTCTGGCTCGAGCTCTAGCCGATGAGTATCTGCAGCAGGATAGTGCAAGCATGAGTAAGCAAAAGGGTACTCCAAGTTTAGCTGCTCGTAAACAACCTTCACGAGCTCTCATGCTTTTCTTAGAATTCTTGGAGAAGGCTAGCCTTCCTCCAATGGCGGATGGGAAAACATGTGGGTCTTGGCTGTTAAGTGGCGATGGTGATGGAATTGAGTTGAGATCTCAACAGAAAGCTGCAAGCCATCGCTGGAACTTAGTTACAATTTTCTGCCAGATGCACCACCTTCCCTTGAGCACAAGATATCTTTCTGTACTGGCAAGAGACAATGATTGGGTTGGCTTTTTGTCAGAAGCTCAGATTGGTGGATATCCTTTTGACATGGTGGTCCAAGTGGCGTCAAAGGACTTCAGTGATCCACGTCTTAAAATTCATATTTCAACAGTTCTGAAAGGCATGCAGTCAAGAAGAAAAGCTAGCTCTTCAACAAATACAGATACTATGGAAAAAAGGAGTGGAGCTTCCTTTACCAATGAAAGCATTTGTGTCCCAGTTGAGCTTTTTAGAATATTAGCAGAATGTGAAAAGCAGAAAAATCCTGGAGAGGCCATTTTGATGAAAGCAAAGGAGTTATCCTGGTCAATTTTGGCAATGATTGCATCATGCTTTTCAGACGTGTCTCCAATATCTTGCCTAACAGTCTGGCTGGAAATAACTGCTGCAAGGGAAACTTCATCTATCAAGGTGAATGATATTGCTTCCAGAATTGCAAATAATGTTGGAGCAGCTGTGGAAGCTACTAATGCTCTGCAAGCAGGAGGGAGTAAATCTCTTACATTTCATTACAATAGGCAGAATTCAAAGAGAAGGCGGCTTCTGGAACCCAACTCAGGAGATCCCTCAGCTGCTACAGCATCTGAAATTTTGGATTCTCCTGTGGGTGCAAAAATATTTGATAACCAGCGAACTATTTCTGAAGGCGAAAGAAATATAAAACTTGGCGGAAATATGAATTTAGCTGATTCTGATGAAGTGTCTGTTTCGCTGTCCAAGATGGTTTCAGTGCTTTGTGAGCAACACCTGTTCCTGCCTTTGTTAAGGGCATTTGAAATGTTCCTTCCTTCATGTTCTCTCGTACCTTTCATACGTGCACTTCAGGCATTTTCACAAATGCGCCTTTCTGAAGCATCAGCTCATTTAGATTCCTTTTGTGCCCGAATTAAAGAAGAGTCGACTCGCTTACAGGCAAATGTAGGAAGAGATGTGCACATTGGTGCATCATGGATAAGCTCAACCGCTATTAAAGCTGCGGATGCTATGCTTTTGACATGTCCATCTCCTTATGAAAAGAGATGCTTGCTAAAACTCCTTGCTGCCACTGATTTTGGTGATGGAGGCTCCGCAGCTACTCATTACCAGCGGCTTCATTGGAAAATCAATTTAGCGGAGCCACTATTACGCAAGGATGATAATTTACACCTAGGGAATGAAACTCTAGATGATGGTGCACTTGCAACAGCATTGGAAAGTAATAGACACTGGGAGCAAGCACGCAACTGGGCGAGACAGTTGGAGGCCAGTGCTGGAGTTTGGAAATCTGCTGTTCATCATGTAACCGAAACTCAGGCTGAATCTATGGTAGCTGAGTGGAAGGAATTTCTTTGGGATGTTCCCGAGGAGAGAATCGCTTTATGGGGACATTGCCAAACCCTCTTCATCAGATATTCCTTCCCTGCTTTACAGGCTGGGCTATTTTTCCTCAAGCATGCAGAAGCTCTGGAAAAAGATCTTCCAGCTAGGGAGCTTCATGAGCTGTTACTGCTTTCACTACAATGGTTGAGCGGAATGATTACTCTGTCCAATCCAGTTTATCCACTTCATCTGATTCGGGAAATTGAGACTAGAGTATGGCTCTTGGCGGTAGAATCAGAGGCACAAGGTAAGAGTGAAGGAGACTTCAATCTAAGCAGTTCCATCCGTGATCCTATTCACAAAAATAGCTCCAGTATTATTGACAGAACAGCAAGTATCATAACAAAAATGGACAATCACATTGGTACATTTAAGAACAGAACTGTAGAGAAACATGATGCAAGGGAAAATAACCAGGTGTATCACAAGAACCAAGTATTAGATGTTAGCTTTCCAACCACAACAGCAGGGAGTACAAAGACTAAGCGAAGGGCAAAAGGCTATGTGCCATTACGACGGCCGGTACTAGACTCACCAGAAAAAAGCGGTGATCTTGATGAGGGTTCTAATTCTCTCAATGTTAGATATGAATTGCAGTCTCAGGATGAAAACTCAAAAACGGAGATGTCTTTTTCACGGTGGGAGGAAAGGGTTGGACCTGCAGAGCTGGAAAGGGCTGTTCTTTCTTTATTAGAATTTGGACAAATAGCTGCTGCAAAGCAACTCCAGCACAAGCTGTCTCCAGTAAAAGTACCATCTGAAATTTTACTTGTGGACGCCGCACTGAAGCTTGCTGCTATGTCAACTCCAAGTAAAAAAGTATCTATAGCAATGCTTGATGAAGAAGTACGTTCAGTTATTCAGTCCCACCATATTCTAACCCAGCAACATGAAGTTGATACAGTGCAGGTTTTGGAGAGTCTAGCAACCATTTTTACTGAAGGTAGTGGACGTGGACTATGCAAGAAGATAATAGCAGTCAACAAAGCAGCAAGCATGTTAGGTCTTCCATTTGCGGAGGCATTTGTTAAGCAGCCAATTGAACTACTACAGCTGCTTTCCCTTAAAGCACAAGAATCATTTGAGGAGGCGCATCTCCTTGTCAGAACTCATTCAATGCCCGCAGCCAGTATTGCTCAGATTCTTTCCGAATCCTTTCTAAAGGGCTTATTGGCTGCTCATCGTGGGGGATATATGGATTCTCAAAAAGAAGAAGGACCTGCTCCCTTACTCTGGAGGTTTTCAGACTTCTTAAAGTGGGCAGAGCTTTGTCCTTCTGAACAAGAAATTGGGCATGCACTAATGCGCTTGGTTATTACTGGACAAGAAATACCACATGCCTGCGAGGTTGAGCTTCTAATTTTGTCACACCACTTCTACAAATTATCATCTTGCCTTGATGGAGTTGATGTACTTGTAGCCCTTGCAGCTACTAGAGTTGAAGCTTATGTGTCTGAGGGCGATTTTTCATGTTTGGCTCGTCTGATAACTGGAGTAGGAAACTTCCACGCCCTCAATTTCATTCTCGGAATTCTTATTGAAAATGGCCAACTGGATCTCCTTCTTCAGAAGTATTCAGCTGCTGCAGATGCGAATGCTGGCACTGCTGAGGCCGTCCGCGGATTTCGGATGGCTGTTCTGACATCATTGAAGCATTTTAATCCCAATGACCTTGATGCTTTTGCTATGGTCTATAATCACTTTGACATGAAACATGAAACGGCTGCTCTTTTGGAGTCACGAGCAGAGCAGTCATCAGAACAGTGGTTCTGTCGTTATGACAAGGATCAGAATGAGGACCTTCTAGACTCTATGCGTTATTACATTGAAGCTGCTGAAGTTCACAAATCCATTGATGCTGGCAACAAAACACGCAGAGCATGTGCTCAGGCCTCCCTCTTATCTCTTCAGATTCGAATGCCAGATTTCCACTGGCTGTACCGATCCGAAACCAATGCCAGGCGTGCCCTAGTTGAGCAGTCTCGTTTCCAAGAGGCCCTCATTGTTGCTGAAGCCTATGGTCTTAACCAGCCAAGTGAGTGGGCTTTGGTACTTTGGAACCAGATGCTCAAACCAGAAGTTCTGGAAGATTTTGTGGCTGAATTTGTGGCTGTTCTTCCTCTCCAGCCCTCAATGCTTGTTGATCTAGCAAGGTTTTACAGGGCCGAGGTGGCAGCGAGAGGGGACCAGTCCCAGTTCTCAGTTTGGTTAACTGGGGGAGGGTTGCCAGCGGAATGGGCAAAATATCTGGGGAGGTCGTTTCGATGCTTGTTGAAAAGGACTAGAGATTTGAAGTTGAGGTTGCAGCTGGCTACTGTGGCAACTGGTTTTGGAGATGTTTTTGATGCATGCACGAAGGCGTTAGATAGGGTGCCTGAGAATGTAGGACCTCTTGTCCTGAGGAAAGGCCACGGTGGTGCTTATCTACCACTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Spatacsin_C

Protein Analysis

3230

Amino Acids

360.86

Weight (kDa)

5.67

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spatacsin_C PF14649 2848 - 3139 1.8e-72 Spatacsin C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AasI GACNNNNNNGTC 2 cut(s) 5521, 5948
Acc16I TGCGCA 2 cut(s) 1398, 1952
Acc36I ACCTGC 4 cut(s) 4994, 7921, 8152, 8482
AccB1I GGYRCC 1 cut(s) 9625
AccB7I CCANNNNNTGG 1 cut(s) 1286
AccBSI CCGCTC 1 cut(s) 7404
AccI GTMKAC 1 cut(s) 6794
AccII CGCG 3 cut(s) 4530, 4532, 8874
AccIII TCCGGA 3 cut(s) 54, 4303, 4555
AcoI YGGCCR 4 cut(s) 3360, 5542, 7772, 8800
AcyI GRCGYC 2 cut(s) 5960, 8031
AfeI AGCGCT 1 cut(s) 2422
AflII CTTAAG 2 cut(s) 3401, 5500
AflIII ACRYGT 5 cut(s) 1528, 3943, 5735, 6237, 6890
AgeI ACCGGT 1 cut(s) 2776
AhdI GACNNNNNGTC 1 cut(s) 9647
AhlI ACTAGT 1 cut(s) 1175
AjiI CACGTC 5 cut(s) 4901, 5189, 5984, 6238, 8207
AjuI GAANNNNNNNTTGG 4 cut(s) 5907, 5939, 8526, 8558
AleI CACNNNNGTG 3 cut(s) 6834, 9669, 9688
Alw44I GTGCAC 5 cut(s) 4353, 4729, 6711, 6827, 7068
AlwNI CAGNNNCTG 4 cut(s) 296, 1696, 6479, 8837
Ama87I CYCGRG 2 cut(s) 5574, 7235
Aor13HI TCCGGA 3 cut(s) 54, 4303, 4555
Aor51HI AGCGCT 1 cut(s) 2422
ApaI GGGCCC 1 cut(s) 122
ApaLI GTGCAC 5 cut(s) 4353, 4729, 6711, 6827, 7068
ArsI GACNNNNNNTTYG 4 cut(s) 3420, 3452, 9526, 9558
AsiGI ACCGGT 1 cut(s) 2776
Asp700I GAANNNNTTC 8 cut(s) 273, 978, 3578, 3945, 4593, 6532, 8365, 8409
AspA2I CCTAGG 1 cut(s) 7042
AspLEI GCGC 9 cut(s) 1399, 1953, 2423, 3630, 4532, 5393, 6738, 8347, 8562
AsuC2I CCSGG 1 cut(s) 851
AsuII TTCGAA 2 cut(s) 2848, 9169
AsuNHI GCTAGC 2 cut(s) 5705, 6038
AvaI CYCGRG 2 cut(s) 5574, 7235
AvrII CCTAGG 1 cut(s) 7042
AxyI CCTNAGG 2 cut(s) 3173, 9653
BaeGI GKGCMC 9 cut(s) 122, 4357, 4468, 4733, 6715, 6778, 6831, 7072, 9223
BaeI ACNNNNGTAYC 2 cut(s) 4773, 4806
BalI TGGCCA 3 cut(s) 3362, 5544, 8802
BanI GGYRCC 1 cut(s) 9625
BanII GRGCYC 3 cut(s) 122, 5581, 5674
BarI GAAGNNNNNNTAC 4 cut(s) 2559, 2591, 5647, 5679
BauI CACGAG 5 cut(s) 1859, 3087, 4400, 5667, 8994
BbsI GAAGAC 2 cut(s) 266, 8252
BbvCI CCTCAGC 2 cut(s) 6463, 8862
BceAI ACGGC 4 cut(s) 3584, 7787, 8852, 8991
BcgI CGANNNNNNTGC 2 cut(s) 9191, 9225
BciVI GTATCC 2 cut(s) 1883, 1984
BclI TGATCA 2 cut(s) 1909, 3802
BcnI CCSGG 1 cut(s) 851
BcuI ACTAGT 1 cut(s) 1175
BfoI RGCGCY 1 cut(s) 2424
BfrI CTTAAG 2 cut(s) 3401, 5500
BfuAI ACCTGC 4 cut(s) 4994, 7921, 8152, 8482
BfuI GTATCC 2 cut(s) 1883, 1984
BglI GCCNNNNNGGC 1 cut(s) 9425
BglII AGATCT 3 cut(s) 392, 5783, 7348
BlnI CCTAGG 1 cut(s) 7042
BmeRI GACNNNNNGTC 1 cut(s) 9647
BmeT110I CYCGRG 2 cut(s) 5574, 7235
BmgBI CACGTC 5 cut(s) 4901, 5189, 5984, 6238, 8207
BmrI ACTGGG 9 cut(s) 1962, 3778, 3913, 4720, 6107, 7111, 7129, 9442, 9477
BmtI GCTAGC 2 cut(s) 5709, 6042
BmuI ACTGGG 9 cut(s) 1962, 3778, 3913, 4720, 6107, 7111, 7129, 9442, 9477
BoxI GACNNNNGTC 1 cut(s) 1275
BpiI GAAGAC 2 cut(s) 266, 8252
Bpu10I CCTNAGC 5 cut(s) 3217, 4974, 6463, 8862, 9141
Bpu14I TTCGAA 2 cut(s) 2848, 9169
BpuEI CTTGAG 7 cut(s) 685, 1096, 1476, 3899, 5165, 5875, 7307
BpuMI CCSGG 1 cut(s) 851
BsaAI YACGTR 1 cut(s) 6710
BsaBI GATNNNNATC 3 cut(s) 1894, 4993, 5592
BsaHI GRCGYC 2 cut(s) 5960, 8031
BsaI GGTCTC 1 cut(s) 3101
BsaWI WCCGGW 7 cut(s) 54, 545, 1159, 1648, 2776, 4303, 4555
Bse118I RCCGGY 2 cut(s) 2776, 7774
Bse21I CCTNAGG 2 cut(s) 3173, 9653
Bse3DI GCAATG 9 cut(s) 574, 1383, 2632, 3365, 4611, 5442, 6219, 7261, 8091
Bse8I GATNNNNATC 3 cut(s) 1894, 4993, 5592
BseAI TCCGGA 3 cut(s) 54, 4303, 4555
BseJI GATNNNNATC 3 cut(s) 1894, 4993, 5592
BseMI GCAATG 9 cut(s) 574, 1383, 2632, 3365, 4611, 5442, 6219, 7261, 8091
BseRI GAGGAG 6 cut(s) 767, 3470, 4469, 5135, 7253, 8354
BseSI GKGCMC 9 cut(s) 122, 4357, 4468, 4733, 6715, 6778, 6831, 7072, 9223
BseX3I CGGCCG 1 cut(s) 7772
BseYI CCCAGC 3 cut(s) 3536, 7307, 8136
BsgI GTGCAG 2 cut(s) 5124, 8180
Bsh1236I CGCG 3 cut(s) 4530, 4532, 8874
Bsh1285I CGRYCG 2 cut(s) 2437, 7775
BshNI GGYRCC 1 cut(s) 9625
BshTI ACCGGT 1 cut(s) 2776
BsiEI CGRYCG 2 cut(s) 2437, 7775
BsiHKCI CYCGRG 2 cut(s) 5574, 7235
BsiSI CCGG 9 cut(s) 55, 546, 851, 1160, 1649, 2777, 4304, 4556, 7775
BsmBI CGTCTC 2 cut(s) 3421, 4574
BsmI GAATGC 3 cut(s) 4013, 8854, 9177
Bso31I GGTCTC 1 cut(s) 3101
BsoBI CYCGRG 2 cut(s) 5574, 7235
Bsp119I TTCGAA 2 cut(s) 2848, 9169
Bsp120I GGGCCC 1 cut(s) 118
Bsp13I TCCGGA 3 cut(s) 54, 4303, 4555
Bsp1407I TGTACA 1 cut(s) 1089
Bsp19I CCATGG 1 cut(s) 2378
BspEI TCCGGA 3 cut(s) 54, 4303, 4555
BspFNI CGCG 3 cut(s) 4530, 4532, 8874
BspHI TCATGA 2 cut(s) 3277, 7369
BspMAI CTGCAG 5 cut(s) 1103, 2493, 5601, 7918, 8842
BspMI ACCTGC 4 cut(s) 4994, 7921, 8152, 8482
BspOI GCTAGC 2 cut(s) 5709, 6042
BspQI GCTCTTC 2 cut(s) 3304, 6049
BspT104I TTCGAA 2 cut(s) 2848, 9169
BspT107I GGYRCC 1 cut(s) 9625
BspTI CTTAAG 2 cut(s) 3401, 5500
BspTNI GGTCTC 1 cut(s) 3101
BsrBI CCGCTC 1 cut(s) 7404
BsrDI GCAATG 9 cut(s) 574, 1383, 2632, 3365, 4611, 5442, 6219, 7261, 8091
BsrFI RCCGGY 2 cut(s) 2776, 7774
BsrGI TGTACA 1 cut(s) 1089
BssAI RCCGGY 2 cut(s) 2776, 7774
BssNI GRCGYC 2 cut(s) 5960, 8031
BssSI CACGAG 5 cut(s) 1859, 3087, 4400, 5667, 8994
BssT1I CCWWGG 4 cut(s) 14, 2369, 2378, 7042
Bst2BI CACGAG 5 cut(s) 1859, 3087, 4400, 5667, 8994
BstACI GRCGYC 2 cut(s) 5960, 8031
BstAFI CTTAAG 2 cut(s) 3401, 5500
BstAPI GCANNNNNTGC 3 cut(s) 5198, 5534, 6218
BstAUI TGTACA 1 cut(s) 1089
BstBAI YACGTR 1 cut(s) 6710
BstBI TTCGAA 2 cut(s) 2848, 9169
BstDSI CCRYGG 4 cut(s) 2149, 2378, 8872, 9664
BstEII GGTNACC 1 cut(s) 2373
BstFNI CGCG 3 cut(s) 4530, 4532, 8874
BstH2I RGCGCY 1 cut(s) 2424
BstHHI GCGC 9 cut(s) 1399, 1953, 2423, 3630, 4532, 5393, 6738, 8347, 8562
BstMCI CGRYCG 2 cut(s) 2437, 7775
BstPAI GACNNNNGTC 1 cut(s) 1275
BstPI GGTNACC 1 cut(s) 2373
BstSLI GKGCMC 9 cut(s) 122, 4357, 4468, 4733, 6715, 6778, 6831, 7072, 9223
BstUI CGCG 3 cut(s) 4530, 4532, 8874
BstV2I GAAGAC 2 cut(s) 266, 8252
BstX2I RGATCY 9 cut(s) 392, 1814, 1956, 3482, 4254, 5783, 6457, 7348, 8809
BstXI CCANNNNNNTGG 3 cut(s) 4828, 9294, 9489
BstYI RGATCY 9 cut(s) 392, 1814, 1956, 3482, 4254, 5783, 6457, 7348, 8809
BstZI CGGCCG 1 cut(s) 7772
Bsu36I CCTNAGG 2 cut(s) 3173, 9653
BsuI GTATCC 2 cut(s) 1883, 1984
BtgI CCRYGG 4 cut(s) 2149, 2378, 8872, 9664
BtgZI GCGATG 2 cut(s) 5775, 5792
BtrI CACGTC 5 cut(s) 4901, 5189, 5984, 6238, 8207
BtsI GCAGTG 3 cut(s) 2187, 4702, 8856
BveI ACCTGC 4 cut(s) 4994, 7921, 8152, 8482
CaiI CAGNNNCTG 4 cut(s) 296, 1696, 6479, 8837
CciI TCATGA 2 cut(s) 3277, 7369
CfoI GCGC 9 cut(s) 1399, 1953, 2423, 3630, 4532, 5393, 6738, 8347, 8562
Cfr10I RCCGGY 2 cut(s) 2776, 7774
Cfr42I CCGCGG 1 cut(s) 8875
CseI GACGC 3 cut(s) 2471, 5949, 8039
CsiI ACCWGGT 2 cut(s) 842, 7668
CspAI ACCGGT 1 cut(s) 2776
CspCI CAANNNNNGTGG 6 cut(s) 581, 616, 2659, 2694, 6928, 6963
DraI TTTAAA 1 cut(s) 1558
DrdI GACNNNNNNGTC 2 cut(s) 5521, 5948
DriI GACNNNNNGTC 1 cut(s) 9647
DseDI GACNNNNNNGTC 2 cut(s) 5521, 5948
EaeI YGGCCR 4 cut(s) 3360, 5542, 7772, 8800
EagI CGGCCG 1 cut(s) 7772
Eam1105I GACNNNNNGTC 1 cut(s) 9647
EciI GGCGGA 2 cut(s) 5738, 6579
Ecl136II GAGCTC 2 cut(s) 5579, 5672
EclXI CGGCCG 1 cut(s) 7772
Eco130I CCWWGG 4 cut(s) 14, 2369, 2378, 7042
Eco147I AGGCCT 1 cut(s) 9146
Eco24I GRGCYC 3 cut(s) 122, 5581, 5674
Eco31I GGTCTC 1 cut(s) 3101
Eco32I GATATC 3 cut(s) 3513, 5867, 5933
Eco47III AGCGCT 1 cut(s) 2422
Eco52I CGGCCG 1 cut(s) 7772
Eco53kI GAGCTC 2 cut(s) 5579, 5672
Eco81I CCTNAGG 2 cut(s) 3173, 9653
Eco88I CYCGRG 2 cut(s) 5574, 7235
Eco91I GGTNACC 1 cut(s) 2373
EcoICRI GAGCTC 2 cut(s) 5579, 5672
EcoO65I GGTNACC 1 cut(s) 2373
EcoRI GAATTC 7 cut(s) 1242, 1783, 3578, 3588, 5690, 6418, 8784
EcoRV GATATC 3 cut(s) 3513, 5867, 5933
EcoT14I CCWWGG 4 cut(s) 14, 2369, 2378, 7042
EcoT22I ATGCAT 7 cut(s) 6, 2207, 2731, 3757, 3892, 5361, 9604
EcoT38I GRGCYC 3 cut(s) 122, 5581, 5674
ErhI CCWWGG 4 cut(s) 14, 2369, 2378, 7042
Esp3I CGTCTC 2 cut(s) 3421, 4574
FauI CCCGC 1 cut(s) 8383
FauNDI CATATG 2 cut(s) 2731, 4127
FbaI TGATCA 2 cut(s) 1909, 3802
FblI GTMKAC 1 cut(s) 6794
FriOI GRGCYC 3 cut(s) 122, 5581, 5674
FspI TGCGCA 2 cut(s) 1398, 1952
GlaI GCGC 9 cut(s) 1398, 1952, 2422, 3629, 4531, 5392, 6737, 8346, 8561
GsaI CCCAGC 3 cut(s) 3540, 7311, 8140
HaeII RGCGCY 1 cut(s) 2424
HapII CCGG 9 cut(s) 55, 546, 851, 1160, 1649, 2777, 4304, 4556, 7775
HgaI GACGC 3 cut(s) 2471, 5949, 8039
HhaI GCGC 9 cut(s) 1399, 1953, 2423, 3630, 4532, 5393, 6738, 8347, 8562
Hin1I GRCGYC 2 cut(s) 5960, 8031
Hin6I GCGC 9 cut(s) 1397, 1951, 2421, 3628, 4530, 5391, 6736, 8345, 8560
HinP1I GCGC 9 cut(s) 1397, 1951, 2421, 3628, 4530, 5391, 6736, 8345, 8560
HincII GTYRAC 7 cut(s) 424, 2311, 3652, 6795, 8058, 8236, 9465
HindII GTYRAC 7 cut(s) 424, 2311, 3652, 6795, 8058, 8236, 9465
HindIII AAGCTT 4 cut(s) 1265, 1916, 8042, 8697
HpaI GTTAAC 2 cut(s) 424, 9465
HpaII CCGG 9 cut(s) 55, 546, 851, 1160, 1649, 2777, 4304, 4556, 7775
Hpy99I CGWCG 3 cut(s) 2487, 2686, 7773
HpyCH4IV ACGT 9 cut(s) 3303, 3711, 4900, 5188, 5983, 6237, 6709, 8104, 8206
HpySE526I ACGT 9 cut(s) 3303, 3711, 4900, 5188, 5983, 6237, 6709, 8104, 8206
Hsp92I GRCGYC 2 cut(s) 5960, 8031
HspAI GCGC 9 cut(s) 1397, 1951, 2421, 3628, 4530, 5391, 6736, 8345, 8560
Kpn2I TCCGGA 3 cut(s) 54, 4303, 4555
Ksp22I TGATCA 2 cut(s) 1909, 3802
KspAI GTTAAC 2 cut(s) 424, 9465
KspI CCGCGG 1 cut(s) 8875
LguI GCTCTTC 2 cut(s) 3304, 6049
MabI ACCWGGT 2 cut(s) 842, 7668
MaeII ACGT 9 cut(s) 3303, 3711, 4900, 5188, 5983, 6237, 6709, 8104, 8206
MbiI CCGCTC 1 cut(s) 7404
MfeI CAATTG 2 cut(s) 2919, 8292
MflI RGATCY 9 cut(s) 392, 1814, 1956, 3482, 4254, 5783, 6457, 7348, 8809
MlsI TGGCCA 3 cut(s) 3362, 5544, 8802
MluNI TGGCCA 3 cut(s) 3362, 5544, 8802
MmeI TCCRAC 9 cut(s) 969, 1054, 3131, 3286, 3937, 6322, 7113, 7733, 7888
Mox20I TGGCCA 3 cut(s) 3362, 5544, 8802
Mph1103I ATGCAT 7 cut(s) 6, 2207, 2731, 3757, 3892, 5361, 9604
MroI TCCGGA 3 cut(s) 54, 4303, 4555
MroXI GAANNNNTTC 8 cut(s) 273, 978, 3578, 3945, 4593, 6532, 8365, 8409
MscI TGGCCA 3 cut(s) 3362, 5544, 8802
MslI CAYNNNNRTG 9 cut(s) 471, 3851, 4350, 5550, 6176, 6834, 7393, 9669, 9688
Msp20I TGGCCA 3 cut(s) 3362, 5544, 8802
MspA1I CMGCKG 8 cut(s) 6350, 6467, 6982, 8308, 8834, 8874, 9485, 9562
MspCI CTTAAG 2 cut(s) 3401, 5500
MspI CCGG 9 cut(s) 55, 546, 851, 1160, 1649, 2777, 4304, 4556, 7775
MunI CAATTG 2 cut(s) 2919, 8292
Mva1269I GAATGC 3 cut(s) 4013, 8854, 9177
MvnI CGCG 3 cut(s) 4530, 4532, 8874
NciI CCSGG 1 cut(s) 851
NcoI CCATGG 1 cut(s) 2378
NdeI CATATG 2 cut(s) 2731, 4127
NheI GCTAGC 2 cut(s) 5705, 6038
NmeAIII GCCGAG 2 cut(s) 3396, 9445
NmuCI GTSAC 7 cut(s) 1938, 2373, 3299, 4539, 5483, 8619, 8991
NsbI TGCGCA 2 cut(s) 1398, 1952
NsiI ATGCAT 7 cut(s) 6, 2207, 2731, 3757, 3892, 5361, 9604
NspV TTCGAA 2 cut(s) 2848, 9169
OliI CACNNNNGTG 3 cut(s) 6834, 9669, 9688
PaeI GCATGC 7 cut(s) 2090, 3894, 5431, 6022, 7331, 8552, 9606
PaeR7I CTCGAG 1 cut(s) 5574
PagI TCATGA 2 cut(s) 3277, 7369
PceI AGGCCT 1 cut(s) 9146
PciI ACATGT 4 cut(s) 1528, 3943, 5735, 6890
PciSI GCTCTTC 2 cut(s) 3304, 6049
PcsI WCGNNNNNNNCGW 1 cut(s) 3436
PctI GAATGC 3 cut(s) 4013, 8854, 9177
PdmI GAANNNNTTC 8 cut(s) 273, 978, 3578, 3945, 4593, 6532, 8365, 8409
PflFI GACNNNGTC 1 cut(s) 1054
PflMI CCANNNNNTGG 1 cut(s) 1286
PfoI TCCNGGA 4 cut(s) 849, 1821, 3924, 6160
PinAI ACCGGT 1 cut(s) 2776
Ple19I CGATCG 1 cut(s) 2437
Ppu21I YACGTR 1 cut(s) 6710
PpuMI RGGWCCY 6 cut(s) 2461, 2745, 4979, 8471, 9052, 9641
PscI ACATGT 4 cut(s) 1528, 3943, 5735, 6890
PshAI GACNNNNGTC 1 cut(s) 1275
PsiI TTATAA 1 cut(s) 459
Psp124BI GAGCTC 2 cut(s) 5581, 5674
Psp5II RGGWCCY 6 cut(s) 2461, 2745, 4979, 8471, 9052, 9641
PspEI GGTNACC 1 cut(s) 2373
PspFI CCCAGC 3 cut(s) 3536, 7307, 8136
PspOMI GGGCCC 1 cut(s) 118
PspPPI RGGWCCY 6 cut(s) 2461, 2745, 4979, 8471, 9052, 9641
PspXI VCTCGAGB 1 cut(s) 5574
PsrI GAACNNNNNNTAC 2 cut(s) 5160, 5192
PstI CTGCAG 5 cut(s) 1103, 2493, 5601, 7918, 8842
PstNI CAGNNNCTG 4 cut(s) 296, 1696, 6479, 8837
PsuI RGATCY 9 cut(s) 392, 1814, 1956, 3482, 4254, 5783, 6457, 7348, 8809
PsyI GACNNNGTC 1 cut(s) 1054
PvuI CGATCG 1 cut(s) 2437
PvuII CAGCTG 5 cut(s) 6350, 6467, 8308, 8834, 9562
RseI CAYNNNNRTG 9 cut(s) 471, 3851, 4350, 5550, 6176, 6834, 7393, 9669, 9688
SacI GAGCTC 2 cut(s) 5581, 5674
SacII CCGCGG 1 cut(s) 8875
SalI GTCGAC 1 cut(s) 6793
SapI GCTCTTC 2 cut(s) 3304, 6049
SexAI ACCWGGT 2 cut(s) 842, 7668
Sfr274I CTCGAG 1 cut(s) 5574
Sfr303I CCGCGG 1 cut(s) 8875
SfuI TTCGAA 2 cut(s) 2848, 9169
SgrAI CRCCGGYG 1 cut(s) 2776
SgrBI CCGCGG 1 cut(s) 8875
SlaI CTCGAG 1 cut(s) 5574
SmiMI CAYNNNNRTG 9 cut(s) 471, 3851, 4350, 5550, 6176, 6834, 7393, 9669, 9688
SpeI ACTAGT 1 cut(s) 1175
SphI GCATGC 7 cut(s) 2090, 3894, 5431, 6022, 7331, 8552, 9606
SseBI AGGCCT 1 cut(s) 9146
SstI GAGCTC 2 cut(s) 5581, 5674
StuI AGGCCT 1 cut(s) 9146
StyI CCWWGG 4 cut(s) 14, 2369, 2378, 7042
TaiI ACGT 9 cut(s) 3306, 3714, 4903, 5191, 5986, 6240, 6712, 8107, 8209
TaqII GACCGA 1 cut(s) 4279
TatI WGTACW 7 cut(s) 1089, 1210, 2575, 4715, 5875, 7727, 8665
TauI GCSGC 5 cut(s) 2597, 4448, 6436, 6985, 8036
TseFI GTSAC 7 cut(s) 1938, 2373, 3299, 4539, 5483, 8619, 8991
Tsp45I GTSAC 7 cut(s) 1938, 2373, 3299, 4539, 5483, 8619, 8991
TspGWI ACGGA 7 cut(s) 32, 3287, 4559, 4598, 5473, 7529, 7889
Tth111I GACNNNGTC 1 cut(s) 1054
Van91I CCANNNNNTGG 1 cut(s) 1286
Vha464I CTTAAG 2 cut(s) 3401, 5500
VneI GTGCAC 5 cut(s) 4353, 4729, 6711, 6827, 7068
XbaI TCTAGA 4 cut(s) 3166, 3917, 7057, 9058
XcmI CCANNNNNNNNNTGG 2 cut(s) 5180, 9183
XhoI CTCGAG 1 cut(s) 5574
XmaJI CCTAGG 1 cut(s) 7042
XmiI GTMKAC 1 cut(s) 6794
XmnI GAANNNNTTC 8 cut(s) 273, 978, 3578, 3945, 4593, 6532, 8365, 8409
Zsp2I ATGCAT 7 cut(s) 6, 2207, 2731, 3757, 3892, 5361, 9604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.