Rh2DG277600

phagosome-lysosome fusion involved in apoptotic cell clearance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003216
Physical Location & Seq
Reverse (-)
31383074 .. 31402537
19464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG277600.1

Sequence Viewer

Length: 9681 bp
ATGGATTTGTCTGTGGGTGATAAAGGACTTGCTACACTTCAGTTGCTCAAATGGGGCCCTTCTCAGCCCCAACTAAACTTGTCAGAATTTCGTGAAGCCTTCATTTCACCTACAAGACAGTTATTATTATTGCTTTCGTATCAGTGTGAGGCTTTATTGCTTCCCCTAATTACAGGTAGTAATAATTTGGAGTGTAATATTGATGAAAGTCTTCAAAGTCCAGAGACAGAGCCTGGTAGGTCAGATTCAATAAGGGATGATTTGCCATGCACATCTGGATCATTAGGAGATGTTGATAATGATTTGAGTTTTGGAGGGGACAGTTTAAGATCTAAAAGTTACCCTTTTGTTGGTGATGTTAACTCTCTGGCTTGGGGCGTTTGTGAGGACACTTATAATCAGCACAAGGATGCTTTATTTAGAGAGCTTTTGTTTGTGTGTGGCAAGCAAGGTATTATGGTCCATGCTTTTGTTGAATCTACCGGAAATACTGCAACAACCAGCAATGCACGGGAAGGTGGGTATGGGCAAGGGAGGTGGGTTGAGTGGGGGCCTTCCGCTTCTTTAATTGGAAATATGGAGGTGGAGGAACCTACCAGTTTGAGTTCTGAAGCTACTGGAAATATTGAATTTAACAGATCCAATGGAAACAGTGAAAGTCCCCATATTTGTAATGTGGATGGGAATGAGGAGTTCTCAAAAAGTGTTGCTTCTAAAAGATGGTTGCAATCTTTTTTGACTAAAGTTGAAAATGTTGAATATAATGGTAAAATATTGACCAGGTTCCCGGAAAAGTCATTGTTGCCTAGCTCTGCAAGAGTTGTTTCATTTAGTTTATTTAATAGTAGTAATTCGCCAATTTTGGACTACCTTTCAAACAATGATTCTGCATCAGATAAGGCATGCGGTCAGGAAACAGTTCATGAGTTGGAGAGTGATAAATCTCTGAAATTAGACATAACTTCATCTGATCCACATTTCAAGTCTGAGACTTTGTCCAATCTTTTAGGTGTTGGAATGAATAGTGTGTACAAATGCTGCAGAGTGTTCTCAAGCAATTCTCATTACTTCATTGGATTTGTTTTCACACAGGTTGATCCGGTAATTGTCAATACTAGTGATGAAAGTGGAAAAAGCAAGAAGAATAATGTACTGCTTATTGCTAGATTAGACCACATGGGAATTCATTGGGTTTCCTCAGTGAAGCTTGACGAAAGTCCAAATATTGGCTCAGTAGCACAATGGACAGACTTCCACTTTTCTGATAAACTTCTTGTTTGTCTTAATGCTTGTGGGCTAATTGTATTTTATGCAGCAATGTCAGGTGAGTATGTTGCACATATAGATATTTTACAGACTTTAGGACTCAACTCTGAGTTGCATTTGCAGAAGCAGGAAGCAGTTTCCACAGGTTATGATAAGCATATTACTCAAGTTGATGACATTCAGAACAAATCAGTTTTGCAACATGTTGATTATTCTGGCAGGAGACTGTTTAAAAGGTTGATTTCTGCTTCACATACCTCTCTAGTAGCTGCTATTGATGATTATGGTGTAATATATGTGGTTTCTGCTGGTGAATATCTACCGGACAAATATTATACAAATGCGAAACTACTTCCACATATTCAGCATCTGGAACTTGGTATGTTGGCTGGTTGGGAGGTTGGTGGTTCTGATATAAGCCACCAGAGGGTATATTCTGAGATATCTGGTTTGTGGAATTCTATCATTCCATCCATGATGAAAGGAAGATCCTTCCTGGATGGCTCTGGGAAACAAGTGCTTCAGAGAAACCACGAGTTATACCTCAAACAAGAAGGGATTGGATACAGATCAGAAGTAACTGATCAGAAGCTTGATGACTCTCACAGAAAGTCACACCTTATGCGCAGGATCTTTGTTCCCAGTTACAGATTTAGTGAGAAGGATACTATCTGTTTTTCTCCATTGGGAATTACTCAGCTTATGAAGAACCAAAATTTGCACGATCAGAGGGGTTCTCAAATTGTTCATCTCAATCTGCATGCAGAATCAGCAGTTCGTGATGACAGCTTTTTGAATACTGGTTGTAAAAAGGTTTATCTCCACGGGAAAGAAGAATCCTTTATTGATGAGGCAGTGGGTTGCACATTCCAGGGATGCATTTATTTGGTTACAGTAAGTGGACTTTCGGTGGTGCTTCCCTCTATAGCAGTTTCATCAAATTTTCTTCCCGTAGAAGTTATTGGATGTCGGCAGTTGTGTGTCAACTCAGGCATTGGTTATCAAGTGAAAGATATAAGGGAAGCTAAAGAATCTAAACAGCCTTGGTCACCATGGAATGTTGAAATTATGGACAGAGTTATCCTATATGAAAGCGCTGAAGAAGCCGATCGCTTATGCTTGGAGAATGGTTGGGACCTGAAAATATCTCGGATGCGTCGGCTGCAGTTGGCACTGGATTACTTGAAATTTGATGAGATAGAGAGATCATTAGAAAACCTTGTGGGTGTCAATTTGGCAGAAGAGGGTGTACTGAGATTGCTATTTGCGGCTGTTTATCTGATGCTTCGTAAAGTTGGCAATGATAATGAGGTTTCTGCTGCATCAAGGCTTCTTGCATTAGCCACTTTTTTTGTGACGAAAATGATTCGCAAGTATTGGTTGCTAGAACATAGGAAAGATGCATATGAATCTGGTAGGACCCAAATTCTCTCTCTTCCACCAGTTTCACCGGTGAAGGAAGAAGATGAAATGGCAAATTCAAGGAGGCTTCGTGAGATGGCTCACTTTTTGGAGATAATTCGAAATCTGCAATCTCGACTTGGTTCCAAGTATAAGAGGCCAGGCCAAGAATCGGTGGATAGTGGGGAAGCATCAAGATTGGTTGACACTGATTTATTGCAGAACGAATCTCAGCTATCAATTGTATCTGTGGACACTATATCTTTGGAGACATCAAAACAGCATGAAGTTTCTTTCCCTGTATCGACATCAGGATTTAACTATACTGATAATCTTGCTTTAACACCTGTGGATTCTAAAGTCCCTTTGGACCCAGAGGATTTAAGTGAAGTATCTGCTCTTGTGCCACGAGGGGGTCTCTTAGAGAAGAAAATTCTTCCCTTAGAGAATCCGAAAGAGATGATTGCTCGTTGGAAGATAGATAATCTAGACCTTAGGGCTGTAGTCAGTGATGCTTTACTCTCTGGTCGTCTGCCCTTAGCAGTTCTTCAACTACATCTTCACCGTTCAAGAGATTCATTTTCTGGAAAGGAGCCTCATGATACTTTCACTGAAGTCCGTGACGTTGGAAGAGCTATTGCTTATGACCTATTTTTGAAGGGTGAATCTGGACTTGCTGTGGCCACATTGCAAAGGCTCGGAGAGGATGTAGAAACCAGCCTTAAGCAGTTATTACTCGGCACAGTGAGACGATCTCTTCGTGTGCAAATCACTGAGGAGATGAATAAATATGGTTATCTGGGATCTTATGAGTGGAAGATATTGGATAGGATATCACTTATTGAGAGGCTATACCCCAGCAGTAGTTTTTGGAAAACGCTTCATGGACGGCAGAAAGAATTCACTCGAATTCCAGCAAGTTCCAGTTTGCCCAAGAGATATTATTTGCGCCTACTGGATTCACCTGTAGTCAACAATTTTACCATCGAGTGTGATGAAATTGATGGAGTTGTTTTTGGTTCATGGACAAATGTAAATGAAAATCCTTCTGGTCCTATGGTTGATGAAGATAATGCATACGCTGGTTACTGGGCTGCTGCTGCTGTATGGTTTAGTTTCTATGATCAAAGAACTGTTGATCGAATTGTTTTGGATCAGTCATCTTTCATGGGTGTGCATGTCTTGTGGGAATCACAGCTTGAGTACCATGCATGCCATAATGACTGGGAGGAAGTCTCTAGACTCCTGGACCTTATTCCTGAACATGTTCTAGTAGTTGGAAGCCTTCAAATCAATTTGGATGGGCTACAGCCTGCTTCAACTTTTGAATGCAATAGAGGTTATGAGTATGGTGATTACCTCTGCTCTGTTGAAGAATTGGATGCTGTTTGCATGGATGTACCAGAGATCAAAGTTTTCAGGTTTTCGTGTAATGTTATGTGCTCCATATGGTTAAAGAGGCTGATGGAAGAGAAACTTGCGAGGAAACTAATTTTCTCAAAGGAATATTGGGAAGGCACAGCAGATATACTACCTCTTCTTGCCCGTTCTGGCTTCATTACTAGCAAGTATGAGATCCCTTCAGAGGATGATAATATTGAGGATATTTCGGTCCTGAAATTTCCGGATGGTGGTACTATACAGGCTTTACATAAACTACTTATTCATCATTGTGCACAATACAACTTGCCATTCCTTCTGGACCTTTACCTTGACCAGCACGAGTTGGTAGCAGATAGTGATTCAGTTTGTTCACTTCAGGAAGCCGCAGGAGATTGTCAATGGGCACGATGGTTGCTCCTCTCTAGGGTTAAAGGGTGTGAGTATGAAGCATCATTTTCCAATTCTCGCGCGATACTGTCACACAATCTAGTTCCGGATAGTAACCTCCGTGTTCCAGAGACGGATGAAATAATTCGTACTGTTGATGACATTGCAGAAGGAGGGGGAGAACTGGCAGCTCTGGCAACCTTAATGTATGCCTCTGCCCCCTTTCAAAGTTGTCTGAGTAGTGGCAGTGTAAAGAGGCATAGTAGTACATCAGCCCAGTGCACACTGGAGAATCTCAGGCCCACTCTTCAGCGTTTTCCTACACTGTGGCACACATTTGTATCAGCATGTTTCGGGCAAGATACAACTTCCAATCTTGTGGGGCCTAAAGCAAAGAATGGTTTTTCAGACTATTTAACATGGCGTGATGACATATTCTTCTCTTCTGGACGTGATACTTCACTTCTGCAAATGCTTCCATGCTGGTTTCCAAAGGCTGTGCGGAGGTTAATTCAGCTTTATGCTCAGGGTCCTCTTGGATGGCAATCAATAGCAGGTCTGCCTGTGGGAGAAGGTCTGCTGCAAAGAGATATAGAATTTGTCCTGAACACTGATGAGGATGTAGAAATCAGCTCACTCTCCTGGGAAGCAACTATCCAAAAACACATTGAGGAGGAACTCTACAATTCTGCACTTGAGGGAAATGCACTTGGGCTTGAACACCATTTACATCGTGGACGTGCATTAGCTGCTTTTAATCATTTTCTTGGTTTTAGAGTTCAAAAATTAAAATCAGAAGGAAAAGGACAAATACAAGCAAATGTTCAAGCAGATGTTCAGACACTTCTTGGACCTATAACAGAAAGTGAAGAGTCTCTTCTTTCATCAGTCATGCCACTTGCAATTATGCATTTTGAGGATTCTGTGCTGGTGGCTTCATGCGCTTTTCTACTGGAGCTTTTCGGATTTTCTGCCAGCATGCTCCGCATAGACATTGCTGCCCTGAAACGGATGTCTTACTTTTACAAATCTAGTGACAATATTGACAACTTAAGGAAACTTTCGACAAAAGGGTCTGCATTTCATGCAGTTGGCCATGAAAGTGATATAATGGAGTCTCTGGCTCGAGCTCTAGCCGATGAGTATCTGCAGCAGGATAGTGCAAGCATGAGTAAGCAAAAGGGTACTCCAAGTTTAGCTGCTCATAAACAACCTTCACGAGCTCTCATGCTTTTCTTAGAATTCATGGAGAAGGCTAGCCTTCCTCCAATGGCGGATGGGAAAACATGTGGGTCTTGGCTGTTATGTGGCGATGGTGATGGAATTGAGTTGAGATCTCAACAGAAAGCTGCAAGCCATCGCTGGAACTTAGTTACAATTTTCTGCCAGATGCACCACCTTCCCTTGAGCACAAGATATCTTTCTGTACTGGCAAGAGACAATGATTGGGTTGGCTTTTTGTCAGAAGCTCAGATTGGTGGATATCCTTTTGACACGGTGGTCCAAGTGGCGTCAAAGGACTTCAGTGATCCACGTCTTAAAATTCATATTTCAACAGTTCTGAAAGGCATGCAGTCAAGAAGAAAAGCTAGCTCTTCAACAAATACAGATACTATGGAAAAAAGGAGTGAAGCTTCCTTTACCAATGAAAGCATTTGTGTCCCAGTTGAGCTTTTTAGAATATTAGCAGAATGTGAAAAGCAGAAAAATCCTGGAGAGGCCATTTTGATGAAAGCAAAGGAGTTATCCTGGTCAATTTTGGCAATGATTGCATCATGCTTTTCAGATGTGTCTCCAATATCTTGCCTAACGGTCTGGCTGGAAATAACTGCTGCAAGGGAAACTTCATCTATCAAGGTGAATGATATTGCTTCCAGAATTGCAAATAATGTTGGAGCAGCTGTGGAAGCTACTAATGCTCTGCAAGCAGGAGGGAGTAAATCTCTTACATTTCATTACAATAGGCAGAATTCAAAGAGGAGGCGGCTTCTGGAACCCAACTCAGGAGATCCCTCAGCTGCTACAGCGTCTGAAATTTTGGATTCTCCTGTGGGTGCAAAAATATTTGATAACCAGCGAACTATTTCTGAAGGCGAAAGAAATATAAAACTTGGCGGAAATATGAATTTAGCTGATTCTGATGAAGTGTCTGTTTCGCTGTCCAAGATGGTTTCAGTGCTTTGTGAGCAACACCTGTTCCTGCCTTTGTTAAGGGCATTTGAAATGTTCCTTCCTTCATGTTCTCTCGTACCTTTCATACGTGCACTTCAGGCATTTTCACAAATGCGCCTTTCTGAAGCATCAGCGCATTTAGATTCCTTTTGTGCCCGAATTAAAGAAGAGTCGACTCGCTTACAGGCAAATGTAGGAAGAGATGTGCACATTGGTGCATCTTGGATAAGCTCTACGGCTATTAAAGCTGCGGATGCTATGCTTTTGACATGTCCATCTCCTTATGAAAAGAGATGCTTACTAAAACTCCTTGCTGCCACTGATTTTGGTGATGGAGGCTCCGCAGCCACTCATTACCAGCGGCTTCATTGGAAAATCAATTTAGCGGAGCCACTATTACGCAAGGATGATAATTTACACCTAGGGAATGAAACTCTAGATGATGGTGCACTTGCAACAGCATTGGAAAGTAATAGACACTGGGAGCAAGCACGCAACTGGGCGAGACAGTTGGAGGCCAGTGCTGGAGTTTGGAAATCTGCTGTTCATCATGTAACTGAAACTCAGGCTGAATCTATGGTAGCTGAGTGGAAGGAATTTCTTTGGGATGTTCCCGAGGAGAGAATCGCTTTATGGGGACATTGCCAAACCCTCTTCATCAGATATTCCTTCCCTGCTTTACAGGCTGGGCTATTTTTCCTCAAGCATGCAGAAGCTCTGGAAAAAGATCTTCCAGCTAGGGAGCTTCATGAGCTGTTACTGCTTTCACTACAATGGTTGAGCGGAATGATTACTCTGTCCAATCCAGTTTATCCACTTCATCTGATTCGGGAAATTGAGACTAGAGTATGGCTCTTGGCGGTAGAATCAGAGGCACAAGGTAAGAGTGAAGGAGACTTCAATCTAAGCAGTTCCATCCGTGATCCTATTCACAAAAATAGCTCCAGTATTATTGACAGAACAGCAAGTATCATAACAAAAATGGACAATCACATTGGTACATTTAAGAACAGAACTGTAGAGAAACATGATGCAAGGGAAAATAACCAGGTGTATCACAAGAACCAAGTATTAGATGTTAGCTTTCCAACCACAACAGCAGGGAGTACAAAGACTAAGCGAAGGGCAAAAGGCTATGTGCCATTACGACGGCCAGTACTAGACTCACCAGAAAAAAGCGGTGATCTTGATGAGGGTTCTAATTCTCTCAATGTGAGATATGAATTGCAGTCTCAGGATGAAAACTCAAAAACGGAAATGTCTTTTTCACGGTGGGAGGAAAGGGTTGGACCTGCAGAGCTGGAAAGGGCTGTTCTTTCTTTATTAGAATTTGGACAAATAGCTGCTGCAAAGCAACTCCAGCATAAGCTGTCTCCAGTAAAAGTACCATCTGAAATTTTACTTGTGGACGCTGCACTGAAGCTTGCTGCTATGTCAACTCCAAGTAAAAAAGTATCTATAGCAATGCTTGATGAAGAAGTACGTTCAGTTATTCAGTCCCACCATATTCTAACGCAGCAACATGAAGTTGATACAGTGCAGGTTTTGGAGAGTCTAGCAACCATTTTTACTGAAGGTAGCGGACGTGGACTATGCAAGAGGATAATAGCAGTCAACAAAGCAGCAAGCATGTTAGGTCTTCCATTTGCGGAGGCATTTGTTAAGCAGCCAATTGAACTACTACAGCTGCTTTCCCTTAAAGCACAAGAATCATTTGAGGAGGCACATCTCCTTGTCAGAACTCATTCAATGCCCGCAGCCAGTATTGCTCAGATTCTTTCCGAATCCTTTCTAAAGGGCTTATTGGCTGCTCATCGTGGGGGATATATGGATTCTCAAAAAGAAGAAGGACCTGCTCCCTTACTCTGGAGGTTTTCAGACTTCTTAAAGTGGGCAGAGCTTTGTCCTTCTGAACAAGAAATTGGGCATGCACTAATGCGCTTGGTTATTACTGGACAAGAAATACCACATGCCTGCGAGGTTGAGCTTCTAATTTTGTCACACCACTTCTACAAATTATCATCTTGCCTTGATGGAGTTGATGTACTTGTAGCCCTTGCAGCTACTAGAGTTGAAGCTTATGTGTCTGAGGGTGATTTTTCATGTTTGGCTCGTCTGATAACTGGAGTAGGAAACTTCCACGCCCTCAATTTCATTCTCGGAATTCTGATTGAAAATGGCCAACTGGATCTCCTTCTTCAGAAGTATTCAGCTGCTGCAGATGCGAATGCTGGCACTGCTGAGGCCGTCCGCGGATTTCGGATGGCTGTTCTGACATCATTGAAGCATTTTAATCCCAATGACCTTGATGCTTTTGCTATGGTCTATAATCACTTTGACATGAAACATGAAACGGCTGCTCTTTTGGAGTCACGAGCAGAGCAGTCATCAGAACAGTGGTTCTGTCGTTATGACAAGGATCAGAATGAGGACCTTCTAGACTCTATGCGTTATTACATTGAAGCTGCTGAAGTTCACAAATCCATTGATGCTGGCAACAAAACACGCAGAGCATGTGCTCAGGCCTCCCTCTTATCTCTTCAGATTCGAATGCCAGATTTCCACTGGCTGTACCGATCCGAAACCAATGCCAGGCGTGCCCTAGTTGAGCAGTCTCGTTTCCAAGAGGCCCTCATTGTTGCTGAAGCCTATGGTCTTAACCAGCCAAGTGAGTGGGCTTTGGTACTTTGGAACCAGATGCTCAAACCAGAAGTTCTGGAAGATTTTGTGGCTGAATTTGTGGCTGTTCTTCCTCTCCAGCCCTCAATGCTCATTGATCTAGCAAGGTTTTACAGGGCCGAGGTGGCAGCGAGAGGGGACCAGTCCCAGTTCTCAGTTTGGTTAACTGGGGGAGGGTTGCCAGCGGAATGGGCAAAATATCTGGGGAGGTCGTTTCGATGCTTGTTGAAAAGGACTAGAGATTTGAAGTTGAGGTTGCAGCTGGCTACTGTGGCAACTGGTTTTGGAGATGTTATTGATGCATGCACGAAGGCGTTAGATAGGGTGCCTGAGAATGTAGGACCTCTTGTCCTGAGGAAAGGCCACGGTGGTGCTTATCTACCACTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Spatacsin_C

Protein Analysis

3226

Amino Acids

360.13

Weight (kDa)

5.56

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Spatacsin_C PF14649 2844 - 3135 1.8e-72 Spatacsin C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
AasI GACNNNNNNGTC 2 cut(s) 5509, 5936
Acc16I TGCGCA 1 cut(s) 1892
Acc36I ACCTGC 4 cut(s) 4982, 7909, 8140, 8470
AccB1I GGYRCC 1 cut(s) 9613
AccB7I CCANNNNNTGG 1 cut(s) 1226
AccBSI CCGCTC 1 cut(s) 7392
AccI GTMKAC 1 cut(s) 6782
AccII CGCG 3 cut(s) 4518, 4520, 8862
AccIII TCCGGA 2 cut(s) 4291, 4543
AcoI YGGCCR 4 cut(s) 3348, 5530, 7760, 8788
AcyI GRCGYC 1 cut(s) 5948
AfeI AGCGCT 1 cut(s) 2362
AflII CTTAAG 2 cut(s) 3389, 5488
AflIII ACRYGT 4 cut(s) 1468, 3931, 5723, 6878
AgeI ACCGGT 1 cut(s) 2716
AhdI GACNNNNNGTC 1 cut(s) 9635
AhlI ACTAGT 1 cut(s) 1115
AjiI CACGTC 4 cut(s) 4889, 5177, 5972, 8195
AjuI GAANNNNNNNTTGG 4 cut(s) 5895, 5927, 8514, 8546
AleI CACNNNNGTG 3 cut(s) 6822, 9657, 9676
Alw44I GTGCAC 5 cut(s) 4341, 4717, 6699, 6815, 7056
AlwNI CAGNNNCTG 4 cut(s) 233, 1636, 6467, 8825
Ama87I CYCGRG 2 cut(s) 5562, 7223
Aor13HI TCCGGA 2 cut(s) 4291, 4543
Aor51HI AGCGCT 1 cut(s) 2362
ApaI GGGCCC 1 cut(s) 59
ApaLI GTGCAC 5 cut(s) 4341, 4717, 6699, 6815, 7056
ArsI GACNNNNNNTTYG 4 cut(s) 3408, 3440, 9514, 9546
AsiGI ACCGGT 1 cut(s) 2716
Asp700I GAANNNNTTC 8 cut(s) 210, 918, 3566, 3933, 4581, 6520, 8353, 8397
AspA2I CCTAGG 1 cut(s) 7030
AspLEI GCGC 8 cut(s) 1893, 2363, 3618, 4520, 5381, 6726, 6745, 8550
AsuC2I CCSGG 1 cut(s) 788
AsuII TTCGAA 2 cut(s) 2788, 9157
AsuNHI GCTAGC 2 cut(s) 5693, 6026
AvaI CYCGRG 2 cut(s) 5562, 7223
AvrII CCTAGG 1 cut(s) 7030
AxyI CCTNAGG 2 cut(s) 3161, 9641
BaeGI GKGCMC 9 cut(s) 59, 4345, 4456, 4721, 6703, 6766, 6819, 7060, 9211
BaeI ACNNNNGTAYC 2 cut(s) 4761, 4794
BalI TGGCCA 3 cut(s) 3350, 5532, 8790
BanI GGYRCC 1 cut(s) 9613
BanII GRGCYC 3 cut(s) 59, 5569, 5662
BarI GAAGNNNNNNTAC 2 cut(s) 2499, 2531
BauI CACGAG 5 cut(s) 1799, 3075, 4388, 5655, 8982
BbsI GAAGAC 2 cut(s) 203, 8240
BbvCI CCTCAGC 2 cut(s) 6451, 8850
BceAI ACGGC 5 cut(s) 3572, 6861, 7775, 8840, 8979
BcgI CGANNNNNNTGC 2 cut(s) 9179, 9213
BciVI GTATCC 2 cut(s) 1823, 1924
BclI TGATCA 2 cut(s) 1849, 3790
BcnI CCSGG 1 cut(s) 788
BcuI ACTAGT 1 cut(s) 1115
BfoI RGCGCY 1 cut(s) 2364
BfrI CTTAAG 2 cut(s) 3389, 5488
BfuAI ACCTGC 4 cut(s) 4982, 7909, 8140, 8470
BfuI GTATCC 2 cut(s) 1823, 1924
BglI GCCNNNNNGGC 1 cut(s) 9413
BglII AGATCT 3 cut(s) 329, 5771, 7336
BlnI CCTAGG 1 cut(s) 7030
BmcAI AGTACT 1 cut(s) 7767
BmeRI GACNNNNNGTC 1 cut(s) 9635
BmeT110I CYCGRG 2 cut(s) 5562, 7223
BmgBI CACGTC 4 cut(s) 4889, 5177, 5972, 8195
BmrI ACTGGG 9 cut(s) 1902, 3766, 3901, 4708, 6095, 7099, 7117, 9430, 9465
BmtI GCTAGC 2 cut(s) 5697, 6030
BmuI ACTGGG 9 cut(s) 1902, 3766, 3901, 4708, 6095, 7099, 7117, 9430, 9465
BoxI GACNNNNGTC 1 cut(s) 1215
BpiI GAAGAC 2 cut(s) 203, 8240
Bpu10I CCTNAGC 5 cut(s) 3205, 4962, 6451, 8850, 9129
Bpu14I TTCGAA 2 cut(s) 2788, 9157
BpuEI CTTGAG 6 cut(s) 1036, 1416, 3887, 5153, 5863, 7295
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 6698
BsaBI GATNNNNATC 3 cut(s) 1834, 4981, 5580
BsaHI GRCGYC 1 cut(s) 5948
BsaI GGTCTC 1 cut(s) 3089
BsaWI WCCGGW 6 cut(s) 482, 1099, 1588, 2716, 4291, 4543
Bse118I RCCGGY 1 cut(s) 2716
Bse21I CCTNAGG 2 cut(s) 3161, 9641
Bse3DI GCAATG 9 cut(s) 511, 1323, 2572, 3353, 4599, 5430, 6207, 7249, 8079
Bse8I GATNNNNATC 3 cut(s) 1834, 4981, 5580
BseAI TCCGGA 2 cut(s) 4291, 4543
BseJI GATNNNNATC 3 cut(s) 1834, 4981, 5580
BseMI GCAATG 9 cut(s) 511, 1323, 2572, 3353, 4599, 5430, 6207, 7249, 8079
BseRI GAGGAG 7 cut(s) 704, 3458, 4457, 5123, 6430, 7241, 8342
BseSI GKGCMC 9 cut(s) 59, 4345, 4456, 4721, 6703, 6766, 6819, 7060, 9211
BseYI CCCAGC 2 cut(s) 3524, 7295
BsgI GTGCAG 3 cut(s) 5112, 8007, 8168
Bsh1236I CGCG 3 cut(s) 4518, 4520, 8862
Bsh1285I CGRYCG 1 cut(s) 2377
BshNI GGYRCC 1 cut(s) 9613
BshTI ACCGGT 1 cut(s) 2716
BsiEI CGRYCG 1 cut(s) 2377
BsiHKCI CYCGRG 2 cut(s) 5562, 7223
BsiSI CCGG 7 cut(s) 483, 788, 1100, 1589, 2717, 4292, 4544
BslFI GGGAC 9 cut(s) 332, 645, 2414, 3014, 6083, 7260, 8092, 9418, 9440
BsmBI CGTCTC 2 cut(s) 3409, 4562
BsmFI GGGAC 9 cut(s) 332, 645, 2414, 3014, 6083, 7260, 8092, 9418, 9440
BsmI GAATGC 3 cut(s) 4001, 8842, 9165
Bso31I GGTCTC 1 cut(s) 3089
BsoBI CYCGRG 2 cut(s) 5562, 7223
Bsp119I TTCGAA 2 cut(s) 2788, 9157
Bsp120I GGGCCC 1 cut(s) 55
Bsp13I TCCGGA 2 cut(s) 4291, 4543
Bsp1407I TGTACA 1 cut(s) 1029
Bsp19I CCATGG 1 cut(s) 2318
BspEI TCCGGA 2 cut(s) 4291, 4543
BspFNI CGCG 3 cut(s) 4518, 4520, 8862
BspHI TCATGA 3 cut(s) 922, 3265, 7357
BspMAI CTGCAG 5 cut(s) 1043, 2433, 5589, 7906, 8830
BspMI ACCTGC 4 cut(s) 4982, 7909, 8140, 8470
BspOI GCTAGC 2 cut(s) 5697, 6030
BspQI GCTCTTC 2 cut(s) 3292, 6037
BspT104I TTCGAA 2 cut(s) 2788, 9157
BspT107I GGYRCC 1 cut(s) 9613
BspTI CTTAAG 2 cut(s) 3389, 5488
BspTNI GGTCTC 1 cut(s) 3089
BsrBI CCGCTC 1 cut(s) 7392
BsrDI GCAATG 9 cut(s) 511, 1323, 2572, 3353, 4599, 5430, 6207, 7249, 8079
BsrFI RCCGGY 1 cut(s) 2716
BsrGI TGTACA 1 cut(s) 1029
BssAI RCCGGY 1 cut(s) 2716
BssNI GRCGYC 1 cut(s) 5948
BssSI CACGAG 5 cut(s) 1799, 3075, 4388, 5655, 8982
BssT1I CCWWGG 3 cut(s) 2309, 2318, 7030
Bst2BI CACGAG 5 cut(s) 1799, 3075, 4388, 5655, 8982
BstACI GRCGYC 1 cut(s) 5948
BstAFI CTTAAG 2 cut(s) 3389, 5488
BstAPI GCANNNNNTGC 3 cut(s) 5186, 5522, 6206
BstAUI TGTACA 1 cut(s) 1029
BstBAI YACGTR 1 cut(s) 6698
BstBI TTCGAA 2 cut(s) 2788, 9157
BstDSI CCRYGG 4 cut(s) 2089, 2318, 8860, 9652
BstEII GGTNACC 1 cut(s) 2313
BstFNI CGCG 3 cut(s) 4518, 4520, 8862
BstH2I RGCGCY 1 cut(s) 2364
BstHHI GCGC 8 cut(s) 1893, 2363, 3618, 4520, 5381, 6726, 6745, 8550
BstMCI CGRYCG 1 cut(s) 2377
BstPAI GACNNNNGTC 1 cut(s) 1215
BstPI GGTNACC 1 cut(s) 2313
BstSLI GKGCMC 9 cut(s) 59, 4345, 4456, 4721, 6703, 6766, 6819, 7060, 9211
BstUI CGCG 3 cut(s) 4518, 4520, 8862
BstV2I GAAGAC 2 cut(s) 203, 8240
BstXI CCANNNNNNTGG 3 cut(s) 4816, 9282, 9477
Bsu36I CCTNAGG 2 cut(s) 3161, 9641
BsuI GTATCC 2 cut(s) 1823, 1924
BtgI CCRYGG 4 cut(s) 2089, 2318, 8860, 9652
BtgZI GCGATG 2 cut(s) 5763, 5780
BtrI CACGTC 4 cut(s) 4889, 5177, 5972, 8195
BtsI GCAGTG 3 cut(s) 2127, 4690, 8844
BveI ACCTGC 4 cut(s) 4982, 7909, 8140, 8470
CaiI CAGNNNCTG 4 cut(s) 233, 1636, 6467, 8825
CciI TCATGA 3 cut(s) 922, 3265, 7357
CfoI GCGC 8 cut(s) 1893, 2363, 3618, 4520, 5381, 6726, 6745, 8550
Cfr10I RCCGGY 1 cut(s) 2716
Cfr42I CCGCGG 1 cut(s) 8863
CseI GACGC 4 cut(s) 2411, 5937, 6453, 8027
CsiI ACCWGGT 2 cut(s) 779, 7656
CspAI ACCGGT 1 cut(s) 2716
CspCI CAANNNNNGTGG 6 cut(s) 518, 553, 2599, 2634, 6916, 6951
DraI TTTAAA 1 cut(s) 1498
DrdI GACNNNNNNGTC 2 cut(s) 5509, 5936
DriI GACNNNNNGTC 1 cut(s) 9635
DseDI GACNNNNNNGTC 2 cut(s) 5509, 5936
EaeI YGGCCR 4 cut(s) 3348, 5530, 7760, 8788
Eam1105I GACNNNNNGTC 1 cut(s) 9635
EciI GGCGGA 2 cut(s) 5726, 6567
Ecl136II GAGCTC 2 cut(s) 5567, 5660
Eco130I CCWWGG 3 cut(s) 2309, 2318, 7030
Eco147I AGGCCT 1 cut(s) 9134
Eco24I GRGCYC 3 cut(s) 59, 5569, 5662
Eco31I GGTCTC 1 cut(s) 3089
Eco32I GATATC 4 cut(s) 1710, 3501, 5855, 5921
Eco47III AGCGCT 1 cut(s) 2362
Eco53kI GAGCTC 2 cut(s) 5567, 5660
Eco81I CCTNAGG 2 cut(s) 3161, 9641
Eco88I CYCGRG 2 cut(s) 5562, 7223
Eco91I GGTNACC 1 cut(s) 2313
EcoICRI GAGCTC 2 cut(s) 5567, 5660
EcoO65I GGTNACC 1 cut(s) 2313
EcoRI GAATTC 7 cut(s) 1182, 1723, 3566, 3576, 5678, 6406, 8772
EcoRV GATATC 4 cut(s) 1710, 3501, 5855, 5921
EcoT14I CCWWGG 3 cut(s) 2309, 2318, 7030
EcoT22I ATGCAT 6 cut(s) 2147, 2671, 3745, 3880, 5349, 9592
EcoT38I GRGCYC 3 cut(s) 59, 5569, 5662
ErhI CCWWGG 3 cut(s) 2309, 2318, 7030
Esp3I CGTCTC 2 cut(s) 3409, 4562
FaqI GGGAC 9 cut(s) 332, 645, 2414, 3014, 6083, 7260, 8092, 9418, 9440
FauI CCCGC 1 cut(s) 8371
FauNDI CATATG 2 cut(s) 2671, 4115
FbaI TGATCA 2 cut(s) 1849, 3790
FblI GTMKAC 1 cut(s) 6782
FriOI GRGCYC 3 cut(s) 59, 5569, 5662
FspI TGCGCA 1 cut(s) 1892
GlaI GCGC 8 cut(s) 1892, 2362, 3617, 4519, 5380, 6725, 6744, 8549
GsaI CCCAGC 2 cut(s) 3528, 7299
HaeII RGCGCY 1 cut(s) 2364
HapII CCGG 7 cut(s) 483, 788, 1100, 1589, 2717, 4292, 4544
HgaI GACGC 4 cut(s) 2411, 5937, 6453, 8027
HhaI GCGC 8 cut(s) 1893, 2363, 3618, 4520, 5381, 6726, 6745, 8550
Hin1I GRCGYC 1 cut(s) 5948
Hin6I GCGC 8 cut(s) 1891, 2361, 3616, 4518, 5379, 6724, 6743, 8548
HinP1I GCGC 8 cut(s) 1891, 2361, 3616, 4518, 5379, 6724, 6743, 8548
HincII GTYRAC 8 cut(s) 361, 2251, 2872, 3640, 6783, 8046, 8224, 9453
HindII GTYRAC 8 cut(s) 361, 2251, 2872, 3640, 6783, 8046, 8224, 9453
HindIII AAGCTT 5 cut(s) 1205, 1856, 6069, 8030, 8685
HpaI GTTAAC 2 cut(s) 361, 9453
HpaII CCGG 7 cut(s) 483, 788, 1100, 1589, 2717, 4292, 4544
Hpy99I CGWCG 2 cut(s) 2427, 7761
HpyCH4IV ACGT 7 cut(s) 3291, 4888, 5176, 5971, 6697, 8092, 8194
HpySE526I ACGT 7 cut(s) 3291, 4888, 5176, 5971, 6697, 8092, 8194
Hsp92I GRCGYC 1 cut(s) 5948
HspAI GCGC 8 cut(s) 1891, 2361, 3616, 4518, 5379, 6724, 6743, 8548
Kpn2I TCCGGA 2 cut(s) 4291, 4543
Ksp22I TGATCA 2 cut(s) 1849, 3790
KspAI GTTAAC 2 cut(s) 361, 9453
KspI CCGCGG 1 cut(s) 8863
LguI GCTCTTC 2 cut(s) 3292, 6037
MabI ACCWGGT 2 cut(s) 779, 7656
MaeII ACGT 7 cut(s) 3291, 4888, 5176, 5971, 6697, 8092, 8194
MbiI CCGCTC 1 cut(s) 7392
MfeI CAATTG 2 cut(s) 2907, 8280
MlsI TGGCCA 3 cut(s) 3350, 5532, 8790
MluNI TGGCCA 3 cut(s) 3350, 5532, 8790
MmeI TCCRAC 9 cut(s) 909, 994, 3119, 3274, 3925, 6310, 7101, 7721, 7876
Mox20I TGGCCA 3 cut(s) 3350, 5532, 8790
Mph1103I ATGCAT 6 cut(s) 2147, 2671, 3745, 3880, 5349, 9592
MroI TCCGGA 2 cut(s) 4291, 4543
MroXI GAANNNNTTC 8 cut(s) 210, 918, 3566, 3933, 4581, 6520, 8353, 8397
MscI TGGCCA 3 cut(s) 3350, 5532, 8790
MslI CAYNNNNRTG 9 cut(s) 408, 3839, 4338, 5538, 6164, 6822, 7381, 9657, 9676
Msp20I TGGCCA 3 cut(s) 3350, 5532, 8790
MspA1I CMGCKG 8 cut(s) 6338, 6455, 6970, 8296, 8822, 8862, 9473, 9550
MspCI CTTAAG 2 cut(s) 3389, 5488
MspI CCGG 7 cut(s) 483, 788, 1100, 1589, 2717, 4292, 4544
MunI CAATTG 2 cut(s) 2907, 8280
Mva1269I GAATGC 3 cut(s) 4001, 8842, 9165
MvnI CGCG 3 cut(s) 4518, 4520, 8862
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 1 cut(s) 2318
NdeI CATATG 2 cut(s) 2671, 4115
NheI GCTAGC 2 cut(s) 5693, 6026
NmeAIII GCCGAG 2 cut(s) 3384, 9433
NmuCI GTSAC 8 cut(s) 1878, 2313, 2620, 3287, 4527, 5471, 8607, 8979
NsbI TGCGCA 1 cut(s) 1892
NsiI ATGCAT 6 cut(s) 2147, 2671, 3745, 3880, 5349, 9592
NspV TTCGAA 2 cut(s) 2788, 9157
OliI CACNNNNGTG 3 cut(s) 6822, 9657, 9676
PaeI GCATGC 8 cut(s) 906, 2030, 3882, 5419, 6010, 7319, 8540, 9594
PaeR7I CTCGAG 1 cut(s) 5562
PagI TCATGA 3 cut(s) 922, 3265, 7357
PceI AGGCCT 1 cut(s) 9134
PciI ACATGT 4 cut(s) 1468, 3931, 5723, 6878
PciSI GCTCTTC 2 cut(s) 3292, 6037
PcsI WCGNNNNNNNCGW 1 cut(s) 3424
PctI GAATGC 3 cut(s) 4001, 8842, 9165
PdmI GAANNNNTTC 8 cut(s) 210, 918, 3566, 3933, 4581, 6520, 8353, 8397
PflFI GACNNNGTC 1 cut(s) 994
PflMI CCANNNNNTGG 1 cut(s) 1226
PfoI TCCNGGA 4 cut(s) 786, 1761, 3912, 6148
PinAI ACCGGT 1 cut(s) 2716
Ple19I CGATCG 1 cut(s) 2377
Ppu21I YACGTR 1 cut(s) 6698
PpuMI RGGWCCY 6 cut(s) 2401, 2685, 4967, 8459, 9040, 9629
PscI ACATGT 4 cut(s) 1468, 3931, 5723, 6878
PshAI GACNNNNGTC 1 cut(s) 1215
PsiI TTATAA 1 cut(s) 396
Psp124BI GAGCTC 2 cut(s) 5569, 5662
Psp5II RGGWCCY 6 cut(s) 2401, 2685, 4967, 8459, 9040, 9629
PspEI GGTNACC 1 cut(s) 2313
PspFI CCCAGC 2 cut(s) 3524, 7295
PspOMI GGGCCC 1 cut(s) 55
PspPPI RGGWCCY 6 cut(s) 2401, 2685, 4967, 8459, 9040, 9629
PspXI VCTCGAGB 1 cut(s) 5562
PsrI GAACNNNNNNTAC 2 cut(s) 5148, 5180
PstI CTGCAG 5 cut(s) 1043, 2433, 5589, 7906, 8830
PstNI CAGNNNCTG 4 cut(s) 233, 1636, 6467, 8825
PsyI GACNNNGTC 1 cut(s) 994
PvuI CGATCG 1 cut(s) 2377
PvuII CAGCTG 5 cut(s) 6338, 6455, 8296, 8822, 9550
RseI CAYNNNNRTG 9 cut(s) 408, 3839, 4338, 5538, 6164, 6822, 7381, 9657, 9676
SacI GAGCTC 2 cut(s) 5569, 5662
SacII CCGCGG 1 cut(s) 8863
SalI GTCGAC 1 cut(s) 6781
SapI GCTCTTC 2 cut(s) 3292, 6037
ScaI AGTACT 1 cut(s) 7767
SexAI ACCWGGT 2 cut(s) 779, 7656
Sfr274I CTCGAG 1 cut(s) 5562
Sfr303I CCGCGG 1 cut(s) 8863
SfuI TTCGAA 2 cut(s) 2788, 9157
SgrAI CRCCGGYG 1 cut(s) 2716
SgrBI CCGCGG 1 cut(s) 8863
SlaI CTCGAG 1 cut(s) 5562
SmiMI CAYNNNNRTG 9 cut(s) 408, 3839, 4338, 5538, 6164, 6822, 7381, 9657, 9676
SmlI CTYRAG 9 cut(s) 1051, 1431, 3389, 3866, 5132, 5488, 5562, 5842, 7310
SmoI CTYRAG 9 cut(s) 1051, 1431, 3389, 3866, 5132, 5488, 5562, 5842, 7310
SpeI ACTAGT 1 cut(s) 1115
SphI GCATGC 8 cut(s) 906, 2030, 3882, 5419, 6010, 7319, 8540, 9594
SseBI AGGCCT 1 cut(s) 9134
SstI GAGCTC 2 cut(s) 5569, 5662
StuI AGGCCT 1 cut(s) 9134
StyI CCWWGG 3 cut(s) 2309, 2318, 7030
TaiI ACGT 7 cut(s) 3294, 4891, 5179, 5974, 6700, 8095, 8197
TaqII GACCGA 1 cut(s) 4267
TatI WGTACW 8 cut(s) 1029, 1150, 2515, 4703, 5863, 7715, 7765, 8653
TauI GCSGC 4 cut(s) 2537, 4436, 6424, 6973
TseFI GTSAC 8 cut(s) 1878, 2313, 2620, 3287, 4527, 5471, 8607, 8979
Tsp45I GTSAC 8 cut(s) 1878, 2313, 2620, 3287, 4527, 5471, 8607, 8979
TspGWI ACGGA 6 cut(s) 3275, 4547, 4586, 5461, 7517, 7877
Tth111I GACNNNGTC 1 cut(s) 994
Van91I CCANNNNNTGG 1 cut(s) 1226
Vha464I CTTAAG 2 cut(s) 3389, 5488
VneI GTGCAC 5 cut(s) 4341, 4717, 6699, 6815, 7056
XbaI TCTAGA 4 cut(s) 3154, 3905, 7045, 9046
XcmI CCANNNNNNNNNTGG 2 cut(s) 5168, 9171
XhoI CTCGAG 1 cut(s) 5562
XmaJI CCTAGG 1 cut(s) 7030
XmiI GTMKAC 1 cut(s) 6782
XmnI GAANNNNTTC 8 cut(s) 210, 918, 3566, 3933, 4581, 6520, 8353, 8397
ZrmI AGTACT 1 cut(s) 7767
Zsp2I ATGCAT 6 cut(s) 2147, 2671, 3745, 3880, 5349, 9592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.