Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0014808

Physical Location & Seq

Genomic Coordinates Forward (+)

23020399 .. 23025247

Gene Structure 4849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0231000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGTCAGAGAAACTAACCACATCATCGCCATTTGAAGTTGAAGAAGGAGTCTCAACCCAAGAGAACTTCCCAAAAGAATCTGCAGGAGAAGTAATGCAAGAGACATGTGGACTAACCTTTGGAGGCGACAATGGCACCGCTGCCACATCCGGCAGACAGTCATTTGCAACAAGCGATGGAGGGTACAGTGCAGGTCCTCCGTCTAGCAGGATGACATGTGCAACAATAAGCTACGGAGGTTACTACAGCAGCGGTGGAACGTCTAGCTGCAGACCGACGTGTCATCCGTTACCACCTGGCCTCGGAACACCAATTATCGCAATTGTTCATAGTCCTGAATTTACGTTTGGTGGATGGGGTAATTCTACTGAAAATGTTGATGTAGAGATTGGCCATGATCAGCAACCTGATGATCTGGAGGCTACATATACTGCAGAAGAAGCCGAAAGAAAACAAAGGGAAGATGCAGCTTCCCCAGTAATAACCCACTCAGACTCCATTTCAATTTGTTGGCCACTCAGAAAATTACTTGATAGAGGAAGAAATGAGTCTCATTCCAACAACGACCATGAAACTAGTATTGCAGGACCACCAAGTGAGCATGTACCAAATAATGTCGCAAATTCATCTAACATCATTTCGTCGGTGATAAATAGTGACCTAGTACCCCATGTTCCTCTACATCTTGCTGCTCTCAAAGGTGACTGGAATACTGCCAAAAGCATCTTGCAATCAAAGCCTGGAGCTGTGAGGGCTAGGATCACAAAGGGTTCAGAAACAGCTCTTCACATCGCGGCCGGAGCTAAACATACGTCCTTTGTTGAGGAGCTAGTTAAATGGATGACTGCAGAGGATCTTGAACTGAAGAATGATGTGGAAAACACTGCCCTATTTTTTGCTGCTGTTTCTGGTATCAAAAGGATCGCTGAGGTAATGGTGGAGGTTAATCCGATATTACCTCGGATCCGAGGTAGTAACAATTCAACAGCTCTGCATATGGCTACTTTGCTAGGGCACAGGGAGATGGTAAGGTATCTTTACAGCAAGACTAAAAGAATTTTGACCTACCAGGACCGTGTGGGGCTTCTTATTGCTGCAATAACAGCAGATCTTTATGATGTAGCTCTTGATATTGTTAAACAACACCCTGAAATGGCTCTTGCTCGAGATGAAAACGAAGAGACTGCACTACATGTAATGGCGCGAAAGCCTTCAGCATATCATAATGGAAGTCAGCTGCTTGGATTTTGGAAACGATGTATATTATCTTTCCCCAGGGATTTCAAGCGTTCCTGTGAAGAAAAGGTAAAGCATGCACTAGCCACTGAACTTGTGAAGCAGCTGTGGAAGAAAATTCTGACATTAGAAAATGATTCCAAGATTGGTGATTTGATTAGAAAACCGTCTCGCTTATTGTTTACTGCAGCAGAGTTGGTGGTTCACAGGCAGGAGAAGGTTTTCAATCTTATTTATGAATTAGGTGGATTGAAAGATTTGATAGCATCTTATAAAGATGATAACAATAACAATATGCTTCATTTGGCTGCAAAACTTGCACCTGCCAATAGACTTAATACTGATACTGGGGCAGCATTTCAACTGAGAAGAGAGTTGTTGTGGTTTAAGGAAGTTGAGAAGATCGTCCAACCGTTATACAAAGAGATGAGGAACTCTGATGGCAAAACACCTCAAATTCTATTCACTGAGGAGCACAGGGAATTACTAAAAGAAGGAGAAAAGTGGATGAAGGGTACTGCATCATCATGCATGGTTGTGGCAACCCTCATCGCCACCGTAATGTTTGCTGTTTTCTCCACTGTCCCGGGTGGCAACAACAATGACACAGGCATGCCCATGTTCATAAAAGAAACGGCCTTCAAAATCTTTGCCATATCAGATGCAGTATCACTTGTCTCTTCTGCCACTTCGATCTTGAGTTTTCTCTCGATCCTAACCTCACGCTACACCGAAGGTGACTTCCTCCATTCTTTACCAAACAGGTTGATCGTAGGGCTTGCAACCCTATTCATCTCTATAGGTACCATGATGCTCACGTACGTTGCAACGTTATTTATTGTCCTCGGCTCTGGAAATGAAGGGATAAAAGTTCCGATAACTTTGGTTGCTGTCATTCCAGTTAGTTTCTATGCTTTGCTGCAATTTCCTCTTCTTTCGGATATGATCAGTCATGCTTATATTTCAAGAGTATCTTTTCGTTCTAGCAACCATCTCTTGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

746

Amino Acids

81.93

Weight (kDa)

6.24

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	227 - 314	4.2e-08	Ankyrin repeats (3 copies)
Ank_2	PF12796	277 - 350	5.9e-08	Ankyrin repeats (3 copies)
PGG	PF13962	579 - 693	1.8e-24	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014808)

Species	Orthologous Gene IDs
malus_domestica	MD10G1043900.v1.1
rosa_chinensis	RchiOBHm_Chr5g0047691 RchiOBHm_Chr5g0047861
rosa_laevigata	RLG00000002735 RLG00000009539 RLG00000029900
rosa_multiflora	Rmu_sc0003382.1_g000015 Rmu_sc0003441.1_g000032
rosa_roxburghii	Rroxscaffold_2G00123090 Rroxscaffold_7G00170290
rosa_rugosa	Rorug02G0231000
rosa_samantha	Rh1CG102100 Rh2AG287600 Rh2DG306400 Rh2DG312900 Rh5CG351500 Rh5DG335600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1509
AarI	CACCTGC	1 cut(s)	1567
AasI	GACNNNNNNGTC	1 cut(s)	279
Acc36I	ACCTGC	2 cut(s)	182, 1567
Acc65I	GGTACC	1 cut(s)	2039
AccB1I	GGYRCC	2 cut(s)	134, 2039
AccII	CGCG	2 cut(s)	794, 1204
AciI	CCGC	3 cut(s)	138, 252, 794
AclI	AACGTT	1 cut(s)	2066
AclWI	GGATC	6 cut(s)	767, 861, 929, 958, 971, 1942
AcoI	YGGCCR	3 cut(s)	391, 512, 795
AcsI	RAATTY	5 cut(s)	338, 622, 1056, 1353, 1692
AcuI	CTGAAG	2 cut(s)	884, 1197
AdeI	CACNNNGTG	1 cut(s)	596
AfaI	GTAC	6 cut(s)	185, 606, 666, 1753, 2041, 2057
AfiI	CCNNNNNNNGG	2 cut(s)	302, 1153
AflIII	ACRYGT	4 cut(s)	104, 215, 278, 1192
AhlI	ACTAGT	1 cut(s)	575
AjiI	CACGTC	1 cut(s)	279
AjnI	CCWGG	4 cut(s)	295, 739, 1068, 1274
AjuI	GAANNNNNNNTTGG	2 cut(s)	330, 362
Alw21I	GWGCWC	1 cut(s)	1713
Alw26I	GTCTC	6 cut(s)	55, 95, 555, 1175, 1410, 1918
AlwI	GGATC	6 cut(s)	767, 861, 929, 958, 971, 1942
Ama87I	CYCGRG	2 cut(s)	1164, 1822
AoxI	GGCC	5 cut(s)	298, 391, 512, 795, 1872
ApoI	RAATTY	5 cut(s)	338, 622, 1056, 1353, 1692
Asp700I	GAANNNNTTC	2 cut(s)	1210, 1457
Asp718I	GGTACC	1 cut(s)	2039
AspLEI	GCGC	1 cut(s)	1204
AspS9I	GGNCC	3 cut(s)	194, 587, 1072
AsuC2I	CCSGG	2 cut(s)	1823, 1824
AsuHPI	GGTGA	4 cut(s)	658, 713, 1397, 1985
AvaI	CYCGRG	2 cut(s)	1164, 1822
AvaII	GGWCC	3 cut(s)	194, 587, 1072
BaeGI	GKGCMC	1 cut(s)	1017
BalI	TGGCCA	2 cut(s)	393, 514
BamHI	GGATCC	1 cut(s)	963
BanI	GGYRCC	2 cut(s)	134, 2039
Bbv12I	GWGCWC	1 cut(s)	1713
BbvCI	CCTCAGC	1 cut(s)	927
BccI	CCATC	5 cut(s)	170, 348, 1018, 1670, 2235
BceAI	ACGGC	1 cut(s)	1887
BcgI	CGANNNNNNTGC	2 cut(s)	1166, 1200
BciT130I	CCWGG	4 cut(s)	297, 741, 1070, 1276
BclI	TGATCA	2 cut(s)	397, 2181
BcnI	CCSGG	2 cut(s)	1823, 1824
BcoDI	GTCTC	6 cut(s)	55, 95, 555, 1175, 1410, 1918
BcuI	ACTAGT	1 cut(s)	575
BfaI	CTAG	9 cut(s)	204, 264, 576, 662, 756, 830, 1010, 1319, 2220
BfmI	CTRYAG	7 cut(s)	81, 244, 268, 432, 846, 1422, 2034
BfuAI	ACCTGC	2 cut(s)	182, 1567
BglII	AGATCT	1 cut(s)	1108
Bme1390I	CCNGG	6 cut(s)	297, 741, 1070, 1276, 1823, 1824
Bme18I	GGWCC	3 cut(s)	194, 587, 1072
BmeT110I	CYCGRG	2 cut(s)	1164, 1822
BmgBI	CACGTC	1 cut(s)	279
BmgT120I	GGNCC	3 cut(s)	194, 587, 1072
BmiI	GGNNCC	3 cut(s)	136, 965, 2041
BmrFI	CCNGG	6 cut(s)	297, 741, 1070, 1276, 1823, 1824
BmrI	ACTGGG	2 cut(s)	470, 1593
BmsI	GCATC	6 cut(s)	454, 732, 1511, 1766, 1888, 2037
BmuI	ACTGGG	2 cut(s)	470, 1593
BpmI	CTGGAG	2 cut(s)	437, 762
Bpu10I	CCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	1 cut(s)	1954
BpuMI	CCSGG	2 cut(s)	1823, 1824
BsaAI	YACGTR	1 cut(s)	2055
BsaJI	CCNNGG	7 cut(s)	301, 959, 967, 1274, 1275, 1822, 2080
BsaXI	ACNNNNNCTCC	2 cut(s)	479, 509
Bsc4I	CCNNNNNNNGG	2 cut(s)	302, 1153
Bse1I	ACTGG	4 cut(s)	476, 710, 1588, 2135
BseBI	CCWGG	4 cut(s)	297, 741, 1070, 1276
BseDI	CCNNGG	7 cut(s)	301, 959, 967, 1274, 1275, 1822, 2080
BseGI	GGATG	6 cut(s)	146, 216, 283, 359, 846, 1749
BseLI	CCNNNNNNNGG	2 cut(s)	302, 1153
BseMII	CTCAG	5 cut(s)	504, 532, 918, 1592, 1695
BseNI	ACTGG	4 cut(s)	476, 710, 1588, 2135
BseRI	GAGGAG	2 cut(s)	839, 1721
BseSI	GKGCMC	1 cut(s)	1017
BseX3I	CGGCCG	1 cut(s)	795
BsgI	GTGCAG	2 cut(s)	210, 1170
Bsh1236I	CGCG	2 cut(s)	794, 1204
Bsh1285I	CGRYCG	1 cut(s)	798
BshFI	GGCC	5 cut(s)	300, 393, 514, 797, 1874
BshNI	GGYRCC	2 cut(s)	134, 2039
BsiEI	CGRYCG	1 cut(s)	798
BsiHKAI	GWGCWC	1 cut(s)	1713
BsiHKCI	CYCGRG	2 cut(s)	1164, 1822
BsiSI	CCGG	3 cut(s)	150, 798, 1823
BsiWI	CGTACG	1 cut(s)	2055
BslFI	GGGAC	1 cut(s)	1805
BslI	CCNNNNNNNGG	2 cut(s)	302, 1153
BsmAI	GTCTC	6 cut(s)	55, 95, 555, 1175, 1410, 1918
BsmBI	CGTCTC	1 cut(s)	1410
BsmFI	GGGAC	1 cut(s)	1805
BsnI	GGCC	5 cut(s)	300, 393, 514, 797, 1874
BsoBI	CYCGRG	2 cut(s)	1164, 1822
Bsp1286I	GDGCHC	2 cut(s)	1017, 1713
BspACI	CCGC	3 cut(s)	138, 252, 794
BspANI	GGCC	5 cut(s)	300, 393, 514, 797, 1874
BspCNI	CTCAG	5 cut(s)	503, 531, 919, 1593, 1696
BspFNI	CGCG	2 cut(s)	794, 1204
BspLI	GGNNCC	3 cut(s)	136, 965, 2041
BspMAI	CTGCAG	5 cut(s)	85, 272, 436, 850, 1426
BspMI	ACCTGC	2 cut(s)	182, 1567
BspPI	GGATC	6 cut(s)	767, 861, 929, 958, 971, 1942
BspQI	GCTCTTC	1 cut(s)	789
BspT107I	GGYRCC	2 cut(s)	134, 2039
BsrI	ACTGG	4 cut(s)	476, 710, 1588, 2135
BssECI	CCNNGG	7 cut(s)	301, 959, 967, 1274, 1275, 1822, 2080
Bst2UI	CCWGG	4 cut(s)	297, 741, 1070, 1276
Bst4CI	ACNGT	7 cut(s)	159, 188, 1076, 1404, 1650, 1795, 1819
Bst6I	CTCTTC	5 cut(s)	789, 1173, 1600, 1921, 2172
BstAPI	GCANNNNNTGC	1 cut(s)	1553
BstBAI	YACGTR	1 cut(s)	2055
BstC8I	GCNNGC	3 cut(s)	1314, 1850, 2016
BstDEI	CTNAG	5 cut(s)	490, 518, 927, 1601, 1704
BstF5I	GGATG	6 cut(s)	146, 216, 283, 359, 846, 1749
BstFNI	CGCG	2 cut(s)	794, 1204
BstHHI	GCGC	1 cut(s)	1204
BstMAI	GTCTC	6 cut(s)	55, 95, 555, 1175, 1410, 1918
BstMCI	CGRYCG	1 cut(s)	798
BstMWI	GCNNNNNNNGC	7 cut(s)	132, 440, 736, 752, 800, 1103, 1553
BstNI	CCWGG	4 cut(s)	297, 741, 1070, 1276
BstNSI	RCATGY	6 cut(s)	108, 219, 605, 1196, 1316, 1852
BstSCI	CCNGG	6 cut(s)	295, 739, 1068, 1274, 1821, 1822
BstSFI	CTRYAG	7 cut(s)	81, 244, 268, 432, 846, 1422, 2034
BstSLI	GKGCMC	1 cut(s)	1017
BstUI	CGCG	2 cut(s)	794, 1204
BstX2I	RGATCY	3 cut(s)	853, 963, 1108
BstYI	RGATCY	3 cut(s)	853, 963, 1108
BstZI	CGGCCG	1 cut(s)	795
BsuRI	GGCC	5 cut(s)	300, 393, 514, 797, 1874
BtgZI	GCGATG	4 cut(s)	9, 189, 775, 1771
BtrI	CACGTC	1 cut(s)	279
BtsCI	GGATG	6 cut(s)	146, 216, 283, 359, 846, 1749
BtsI	GCAGTG	1 cut(s)	882
BtsIMutI	CAGTG	5 cut(s)	193, 882, 1323, 1701, 1815
BveI	ACCTGC	2 cut(s)	182, 1567
Cac8I	GCNNGC	3 cut(s)	1314, 1850, 2016
CfoI	GCGC	1 cut(s)	1204
Cfr13I	GGNCC	3 cut(s)	194, 587, 1072
Cfr9I	CCCGGG	1 cut(s)	1822
Csp6I	GTAC	6 cut(s)	184, 605, 665, 1752, 2040, 2056
CspCI	CAANNNNNGTGG	2 cut(s)	1312, 1347
CviQI	GTAC	6 cut(s)	184, 605, 665, 1752, 2040, 2056
DdeI	CTNAG	5 cut(s)	490, 518, 927, 1601, 1704
DraIII	CACNNNGTG	1 cut(s)	596
DrdI	GACNNNNNNGTC	1 cut(s)	279
DseDI	GACNNNNNNGTC	1 cut(s)	279
EaeI	YGGCCR	3 cut(s)	391, 512, 795
EagI	CGGCCG	1 cut(s)	795
Eam1104I	CTCTTC	5 cut(s)	789, 1173, 1600, 1921, 2172
EarI	CTCTTC	5 cut(s)	789, 1173, 1600, 1921, 2172
EclXI	CGGCCG	1 cut(s)	795
Eco47I	GGWCC	3 cut(s)	194, 587, 1072
Eco52I	CGGCCG	1 cut(s)	795
Eco57I	CTGAAG	2 cut(s)	884, 1197
Eco88I	CYCGRG	2 cut(s)	1164, 1822
EcoO109I	RGGNCCY	1 cut(s)	194
EcoRII	CCWGG	4 cut(s)	295, 739, 1068, 1274
EcoT22I	ATGCAT	1 cut(s)	1769
Esp3I	CGTCTC	1 cut(s)	1410
FalI	AAGNNNNNCTT	2 cut(s)	2194, 2226
FaqI	GGGAC	1 cut(s)	1805
FauNDI	CATATG	1 cut(s)	996
FbaI	TGATCA	2 cut(s)	397, 2181
FokI	GGATG	6 cut(s)	133, 223, 270, 366, 853, 1756
FspBI	CTAG	9 cut(s)	204, 264, 576, 662, 756, 830, 1010, 1319, 2220
GlaI	GCGC	1 cut(s)	1203
GsuI	CTGGAG	2 cut(s)	437, 762
HaeIII	GGCC	5 cut(s)	300, 393, 514, 797, 1874
HapII	CCGG	3 cut(s)	150, 798, 1823
HhaI	GCGC	1 cut(s)	1204
Hin6I	GCGC	1 cut(s)	1202
HinP1I	GCGC	1 cut(s)	1202
HinfI	GANTC	5 cut(s)	48, 77, 494, 548, 1373
HpaII	CCGG	3 cut(s)	150, 798, 1823
HphI	GGTGA	4 cut(s)	658, 713, 1397, 1985
Hpy166II	GTNNAC	3 cut(s)	110, 1419, 1441
Hpy188III	TCNNGA	9 cut(s)	335, 416, 857, 1127, 1166, 1933, 1945, 2088, 2202
Hpy8I	GTNNAC	3 cut(s)	110, 1419, 1441
Hpy99I	CGWCG	2 cut(s)	280, 646
HpyAV	CCTTC	8 cut(s)	38, 1221, 1447, 1724, 1741, 1885, 1964, 2090
HpyCH4III	ACNGT	7 cut(s)	159, 188, 1076, 1404, 1650, 1795, 1819
HpyCH4IV	ACGT	7 cut(s)	260, 278, 344, 812, 2054, 2058, 2066
HpyF10VI	GCNNNNNNNGC	7 cut(s)	132, 440, 736, 752, 800, 1103, 1553
HpyF3I	CTNAG	5 cut(s)	490, 518, 927, 1601, 1704
HpySE526I	ACGT	7 cut(s)	260, 278, 344, 812, 2054, 2058, 2066
HspAI	GCGC	1 cut(s)	1202
KpnI	GGTACC	1 cut(s)	2043
Ksp22I	TGATCA	2 cut(s)	397, 2181
LguI	GCTCTTC	1 cut(s)	789
LmnI	GCTCC	4 cut(s)	743, 800, 826, 1708
LweI	GCATC	6 cut(s)	454, 732, 1511, 1766, 1888, 2037
MaeI	CTAG	9 cut(s)	204, 264, 576, 662, 756, 830, 1010, 1319, 2220
MaeII	ACGT	7 cut(s)	260, 278, 344, 812, 2054, 2058, 2066
MaeIII	GTNAC	6 cut(s)	239, 288, 656, 701, 974, 1973
MfeI	CAATTG	1 cut(s)	321
MflI	RGATCY	3 cut(s)	853, 963, 1108
MhlI	GDGCHC	2 cut(s)	1017, 1713
MlsI	TGGCCA	2 cut(s)	393, 514
MluNI	TGGCCA	2 cut(s)	393, 514
MlyI	GAGTC	3 cut(s)	57, 488, 557
MmeI	TCCRAC	2 cut(s)	582, 1669
Mox20I	TGGCCA	2 cut(s)	393, 514
Mph1103I	ATGCAT	1 cut(s)	1769
MroXI	GAANNNNTTC	2 cut(s)	1210, 1457
MscI	TGGCCA	2 cut(s)	393, 514
MseI	TTAA	5 cut(s)	834, 945, 1137, 1572, 1623
MslI	CAYNNNNRTG	5 cut(s)	1762, 1772, 1796, 1847, 1853
Msp20I	TGGCCA	2 cut(s)	393, 514
MspA1I	CMGCKG	4 cut(s)	140, 252, 1237, 1342
MspI	CCGG	3 cut(s)	150, 798, 1823
MspR9I	CCNGG	6 cut(s)	297, 741, 1070, 1276, 1823, 1824
MunI	CAATTG	1 cut(s)	321
MvaI	CCWGG	4 cut(s)	297, 741, 1070, 1276
MvnI	CGCG	2 cut(s)	794, 1204
MwoI	GCNNNNNNNGC	7 cut(s)	132, 440, 736, 752, 800, 1103, 1553
NciI	CCSGG	2 cut(s)	1823, 1824
NdeI	CATATG	1 cut(s)	996
NlaIV	GGNNCC	3 cut(s)	136, 965, 2041
NmeAIII	GCCGAG	1 cut(s)	2061
NmuCI	GTSAC	3 cut(s)	656, 701, 1973
NsiI	ATGCAT	1 cut(s)	1769
NspI	RCATGY	6 cut(s)	108, 219, 605, 1196, 1316, 1852
PaeI	GCATGC	2 cut(s)	1316, 1852
PaeR7I	CTCGAG	1 cut(s)	1164
PaqCI	CACCTGC	1 cut(s)	1567
PasI	CCCWGGG	1 cut(s)	1275
PciI	ACATGT	3 cut(s)	104, 215, 1192
PciSI	GCTCTTC	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	1 cut(s)	284
PdmI	GAANNNNTTC	2 cut(s)	1210, 1457
PfeI	GAWTC	2 cut(s)	77, 1373
Pfl23II	CGTACG	1 cut(s)	2055
PleI	GAGTC	3 cut(s)	56, 488, 556
PpsI	GAGTC	3 cut(s)	56, 488, 556
Ppu21I	YACGTR	1 cut(s)	2055
PpuMI	RGGWCCY	1 cut(s)	194
PscI	ACATGT	3 cut(s)	104, 215, 1192
PsiI	TTATAA	1 cut(s)	1509
Psp1406I	AACGTT	1 cut(s)	2066
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	4 cut(s)	295, 739, 1068, 1274
PspGI	CCWGG	4 cut(s)	295, 739, 1068, 1274
PspLI	CGTACG	1 cut(s)	2055
PspN4I	GGNNCC	3 cut(s)	136, 965, 2041
PspPI	GGNCC	3 cut(s)	194, 587, 1072
PspPPI	RGGWCCY	1 cut(s)	194
PsrI	GAACNNNNNNTAC	2 cut(s)	657, 689
PstI	CTGCAG	5 cut(s)	85, 272, 436, 850, 1426
PsuI	RGATCY	3 cut(s)	853, 963, 1108
PvuII	CAGCTG	2 cut(s)	1237, 1342
RsaI	GTAC	6 cut(s)	185, 606, 666, 1753, 2041, 2057
RsaNI	GTAC	6 cut(s)	184, 605, 665, 1752, 2040, 2056
RseI	CAYNNNNRTG	5 cut(s)	1762, 1772, 1796, 1847, 1853
SapI	GCTCTTC	1 cut(s)	789
SaqAI	TTAA	5 cut(s)	834, 945, 1137, 1572, 1623
Sau96I	GGNCC	3 cut(s)	194, 587, 1072
SchI	GAGTC	3 cut(s)	57, 488, 557
ScrFI	CCNGG	6 cut(s)	297, 741, 1070, 1276, 1823, 1824
SduI	GDGCHC	2 cut(s)	1017, 1713
SfaNI	GCATC	6 cut(s)	454, 732, 1511, 1766, 1888, 2037
SfcI	CTRYAG	7 cut(s)	81, 244, 268, 432, 846, 1422, 2034
Sfr274I	CTCGAG	1 cut(s)	1164
SinI	GGWCC	3 cut(s)	194, 587, 1072
SlaI	CTCGAG	1 cut(s)	1164
SmaI	CCCGGG	1 cut(s)	1824
SmiMI	CAYNNNNRTG	5 cut(s)	1762, 1772, 1796, 1847, 1853
SmlI	CTYRAG	2 cut(s)	1164, 1933
SmoI	CTYRAG	2 cut(s)	1164, 1933
SpeI	ACTAGT	1 cut(s)	575
SphI	GCATGC	2 cut(s)	1316, 1852
SsiI	CCGC	3 cut(s)	138, 252, 794
SspMI	CTAG	9 cut(s)	204, 264, 576, 662, 756, 830, 1010, 1319, 2220
StyD4I	CCNGG	6 cut(s)	295, 739, 1068, 1274, 1821, 1822
TaaI	ACNGT	7 cut(s)	159, 188, 1076, 1404, 1650, 1795, 1819
TaiI	ACGT	7 cut(s)	263, 281, 347, 815, 2057, 2061, 2069
TaqI	TCGA	3 cut(s)	1165, 1928, 1946
TaqII	GACCGA	1 cut(s)	289
TauI	GCSGC	1 cut(s)	797
TfiI	GAWTC	2 cut(s)	77, 1373
Tru1I	TTAA	5 cut(s)	834, 945, 1137, 1572, 1623
Tru9I	TTAA	5 cut(s)	834, 945, 1137, 1572, 1623
TscAI	CASTG	5 cut(s)	193, 889, 1330, 1708, 1822
TseFI	GTSAC	3 cut(s)	656, 701, 1973
Tsp45I	GTSAC	3 cut(s)	656, 701, 1973
TspGWI	ACGGA	3 cut(s)	189, 249, 276
TspMI	CCCGGG	1 cut(s)	1822
TspRI	CASTG	5 cut(s)	193, 889, 1330, 1708, 1822
VpaK11BI	GGWCC	3 cut(s)	194, 587, 1072
XapI	RAATTY	5 cut(s)	338, 622, 1056, 1353, 1692
XceI	RCATGY	6 cut(s)	108, 219, 605, 1196, 1316, 1852
XhoI	CTCGAG	1 cut(s)	1164
XmaI	CCCGGG	1 cut(s)	1822
XmnI	GAANNNNTTC	2 cut(s)	1210, 1457
XspI	CTAG	9 cut(s)	204, 264, 576, 662, 756, 830, 1010, 1319, 2220
Zsp2I	ATGCAT	1 cut(s)	1769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.