Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003859

Physical Location & Seq

Genomic Coordinates Forward (+)

1253574 .. 1256603

Gene Structure 3030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0015700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGATCTTAATGCTCATAATGATGCCGAGAAGAGTGTGGTTAGCGTGCATTGTTATTGCTGTTATTGGCTTTGTTATTTGTCATGATGATGCCACGGGAGCTAAACATTGTGAGCCTGCTTCTTGTGGGGATCTGCATGACATTCGATTCCCTTTTCGTGTGAAAATTAATGGTGCTTATGATCCTAATTGTCTCAGCCATCCAGCTGAACTTTCATGTGAGCAGAACCGCACTGTTCTAAATCTTTTTAATGGTACATATTATGTTAAGACCATCGATTATAGAGACTATACAATGCAAATTGTTGATCCAGGTCTGCTACGCGATACTTGCCCCTTCAGGCCACTCTACAGTCTAACAAGTAGTAACTTTAGTGAAGGGTATACACACGAGCCGGGCTGGGTGAAAAATCAATACCTTGATATTGAGTTTAACTACGTAGTCTTCTTTGATTGCTCATCGGAAGTTGACTCAGCAGAGTACATAAGAACCAATTGCATGGTAGCAGAGACTGCAAGTGTTGCTTCATTTTCTGTCATCCGAGATGAGTTCAGAAAGGGTTTTAAGCTTTCGTGGGGGCCTTTTCTCCCCTTTGAGTACTGCTACACAAGAACCCAGTCCCCCTATTGTTTCCGTGAGTACTTGAAACGTAGTCTCGCAAGAGTTGCCAAGGTCACTGGATGCAGTCTGATGGCACGAATGATTCTGGGCCTTACTGTTTTTCTGGTTATCTGGAGCTACAAATTGTATTGGAAAAAGTTCCTAAAGGAAGATGCAGTTGAGGAATTCTTCAATGCATGCAAGAAACGTATGCAAAGACGGTATTCATACTCAGATATCAAGAAGATGGCAGTTGCTTGCAAAAATAAAGTCAGAGAATATTGGAAAAGGATGAGAAACTGTTCGTACTCAGATATTAAGAAGATGGCCATTGATTTCAAAAACAAAGTCAGTCAGGGAAGCTATAGAGAAACCTTAAGAAGGTTTGCATACTCGGACATTAAGACGATGACACTTGATTTGAAACACAAAGTCAGTCAGGCCAGCTACTGGAAAAAGAAGGATGATGCAGTTGAGGAATTCTTGGATGCATACAAGAACCTTATGCCTCGCAGGTATTCTTATTGGGATGTTAAGAAGATGACGAATGATTTCAAAGATAAACTTGGCCAAGGAGGCTTTGGTTCTGTTTACATAGGAGAGCTGTCAAATGGTCATCTTGTTGCAGTGAAGATGCTGAGTGGTTCCAAAGGCAATGGACAAGATTTCATCAATGAAGTTGGCACAATAGGAAGAATCCATCATGTCAATGTGGTGCAACTAATCGGATTCTGTTCTGTGGGATTAAAACGAGCTCTTGTTTATGACTTCATGCCTAATGGATCCCTAGAAAAATATATCTTTAAGGATAAAGAAAAAAGTCTTTATCTAAGTTGGGATAAAATGCATGAGATAGCTCTAGGGGTGGCTCGCGCAATTGAATATCTACACCAGGGATGTGATATGCAGATTTTACATTTTGATATTAAGCCCCACAACATTCTTCTTGATGAAAATTTTAATTCAAAAATCTCCGACTTCGGGCTTGCAAGATTTTACCCAAAAGACCGTAACACAATATCCGTTACTGCAGCGAGAGGCACAATAGGATATATAGCTCCAGAAATGTTCTACCGAAATATTGGAGGCATTTCATACAAAGCTGATGTTTATAGCTTTGGAATGTTGTTAATGGAAATGGCAGGGCGGAGGAAGAACATGAATGCACATGCACAAAATTCAAGCGAAGCATACTTCCCATCCTGGATTTATGAGCAACTTGAAAAGGGATTGAGCATTGAAATTGAAGATGCCTCTGAGAATGACAGAAAAATATCCAAGAAGATGATAATGGTTGCATTGTGGTGCATACAACTAATGCCTGTGGACCGCCCTTCTATGACCAACGTCTTAGAGATGCTTGAAGGCGAAAATGAAGTTATACAAATGCCTCCAAAGCCCTTCTTTTGTCCCCAAGAGATGCCAACCGAGGACATACCTTATGACAGCGATGAGACAGATAGTGAAGAGGTATCCACGCTACCATATAGTGCTACAGAATCGACCTCCATGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HD Ppx-GppA

Protein Analysis

705

Amino Acids

81.45

Weight (kDa)

8.09

Isoelectric Point (pI)

41.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	37 - 103	2e-13	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	385 - 654	1.8e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	386 - 652	1.9e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195 AT1G09195
fragaria_vesca	FvH4_6g07160 FvH4_6g07160
malus_domestica	MD12G1208200.v1.1
prunus_persica	Prupe.6G315600_v2.0.a1
pyrus_communis	pycom04g17300 pycom12g19560
rosa_chinensis	RchiOBHm_Chr3g0456781
rosa_laevigata	RLG00000000542 RLG00000025278
rosa_multiflora	Rmu_co8143530.1_g000001 Rmu_sc0000133.1_g000024
rosa_roxburghii	Rroxscaffold_6G00422490
rosa_rugosa	Rorug03G0015700 Rorug03G0015700
rosa_samantha	Rh3AG076100 Rh3BG078000 Rh3CG077800 Rh3DG079800
rosa_wichuraiana	Rw3G006530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1104
AccB7I	CCANNNNNTGG	1 cut(s)	1050
AccI	GTMKAC	1 cut(s)	383
AccII	CGCG	2 cut(s)	324, 1473
AciI	CCGC	3 cut(s)	229, 1747, 1930
AclWI	GGATC	5 cut(s)	138, 176, 302, 1377, 1390
AcoI	YGGCCR	2 cut(s)	927, 1168
AcsI	RAATTY	4 cut(s)	785, 1079, 1555, 1777
AcuI	CTGAAG	1 cut(s)	322
AfaI	GTAC	5 cut(s)	256, 482, 599, 641, 908
AfiI	CCNNNNNNNGG	3 cut(s)	981, 1050, 1581
AflII	CTTAAG	1 cut(s)	976
AjnI	CCWGG	3 cut(s)	310, 1491, 1802
Alw21I	GWGCWC	1 cut(s)	1357
Alw26I	GTCTC	5 cut(s)	197, 279, 503, 659, 2048
AlwI	GGATC	5 cut(s)	138, 176, 302, 1377, 1390
AlwNI	CAGNNNCTG	2 cut(s)	512, 1050
AoxI	GGCC	6 cut(s)	341, 578, 709, 927, 1041, 1168
ApeKI	GCWGC	1 cut(s)	1631
ApoI	RAATTY	4 cut(s)	785, 1079, 1555, 1777
ArsI	GACNNNNNNTTYG	6 cut(s)	855, 887, 933, 965, 1003, 1035
AseI	ATTAAT	1 cut(s)	168
Asp700I	GAANNNNTTC	3 cut(s)	758, 901, 1151
AspLEI	GCGC	1 cut(s)	1475
AspS9I	GGNCC	3 cut(s)	578, 709, 1927
AsuC2I	CCSGG	1 cut(s)	396
AsuHPI	GGTGA	1 cut(s)	415
AvaII	GGWCC	1 cut(s)	1927
BalI	TGGCCA	2 cut(s)	929, 1170
BamHI	GGATCC	1 cut(s)	1382
BanII	GRGCYC	1 cut(s)	1357
BauI	CACGAG	1 cut(s)	389
BbsI	GAAGAC	1 cut(s)	436
Bbv12I	GWGCWC	1 cut(s)	1357
BbvI	GCAGC	1 cut(s)	1643
BccI	CCATC	7 cut(s)	207, 281, 685, 841, 919, 1308, 1807
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	3 cut(s)	312, 1493, 1804
BciVI	GTATCC	1 cut(s)	2083
BcnI	CCSGG	1 cut(s)	396
BcoDI	GTCTC	5 cut(s)	197, 279, 503, 659, 2048
BfaI	CTAG	2 cut(s)	1388, 1460
BfmI	CTRYAG	4 cut(s)	349, 964, 1629, 2094
BfrI	CTTAAG	1 cut(s)	976
BfuAI	ACCTGC	1 cut(s)	1104
BfuI	GTATCC	1 cut(s)	2083
BglI	GCCNNNNNGGC	1 cut(s)	1176
BisI	GCNGC	1 cut(s)	1632
BlsI	GCNGC	1 cut(s)	1633
BmcAI	AGTACT	2 cut(s)	599, 641
Bme1390I	CCNGG	4 cut(s)	312, 396, 1493, 1804
Bme18I	GGWCC	1 cut(s)	1927
BmgT120I	GGNCC	3 cut(s)	578, 709, 1927
BmiI	GGNNCC	3 cut(s)	579, 1246, 1384
BmrFI	CCNGG	4 cut(s)	312, 396, 1493, 1804
BmrI	ACTGGG	1 cut(s)	610
BmuI	ACTGGG	1 cut(s)	610
BoxI	GACNNNNGTC	1 cut(s)	1946
BpiI	GAAGAC	1 cut(s)	436
BpmI	CTGGAG	2 cut(s)	754, 1644
BpuMI	CCSGG	1 cut(s)	396
Bsa29I	ATCGAT	1 cut(s)	276
BsaAI	YACGTR	1 cut(s)	439
BsaJI	CCNNGG	6 cut(s)	93, 669, 1171, 1492, 2028, 2109
Bsc4I	CCNNNNNNNGG	3 cut(s)	981, 1050, 1581
Bse1I	ACTGG	3 cut(s)	616, 682, 1055
Bse3DI	GCAATG	1 cut(s)	1261
BseBI	CCWGG	3 cut(s)	312, 1493, 1804
BseCI	ATCGAT	1 cut(s)	276
BseDI	CCNNGG	6 cut(s)	93, 669, 1171, 1492, 2028, 2109
BseGI	GGATG	9 cut(s)	199, 537, 686, 897, 1069, 1093, 1135, 1502, 1799
BseLI	CCNNNNNNNGG	3 cut(s)	981, 1050, 1581
BseMI	GCAATG	1 cut(s)	1261
BseMII	CTCAG	6 cut(s)	208, 486, 846, 924, 1229, 1848
BseNI	ACTGG	3 cut(s)	616, 682, 1055
BseXI	GCAGC	1 cut(s)	1643
BseYI	CCCAGC	1 cut(s)	399
Bsh1236I	CGCG	2 cut(s)	324, 1473
BshFI	GGCC	6 cut(s)	343, 580, 711, 929, 1043, 1170
BshVI	ATCGAT	1 cut(s)	276
BsiHKAI	GWGCWC	1 cut(s)	1357
BsiSI	CCGG	1 cut(s)	395
BslFI	GGGAC	2 cut(s)	604, 1995
BslI	CCNNNNNNNGG	3 cut(s)	981, 1050, 1581
BsmAI	GTCTC	5 cut(s)	197, 279, 503, 659, 2048
BsmFI	GGGAC	2 cut(s)	604, 1995
BsmI	GAATGC	1 cut(s)	1768
BsnI	GGCC	6 cut(s)	343, 580, 711, 929, 1043, 1170
Bsp1286I	GDGCHC	1 cut(s)	1357
Bsp143I	GATC	5 cut(s)	3, 130, 181, 307, 1382
Bsp19I	CCATGG	1 cut(s)	2109
BspACI	CCGC	3 cut(s)	229, 1747, 1930
BspANI	GGCC	6 cut(s)	343, 580, 711, 929, 1043, 1170
BspCNI	CTCAG	6 cut(s)	207, 485, 845, 923, 1230, 1849
BspDI	ATCGAT	1 cut(s)	276
BspFNI	CGCG	2 cut(s)	324, 1473
BspHI	TCATGA	1 cut(s)	82
BspLI	GGNNCC	3 cut(s)	579, 1246, 1384
BspMAI	CTGCAG	1 cut(s)	1633
BspMI	ACCTGC	1 cut(s)	1104
BspPI	GGATC	5 cut(s)	138, 176, 302, 1377, 1390
BspTI	CTTAAG	1 cut(s)	976
BsrDI	GCAATG	1 cut(s)	1261
BsrI	ACTGG	3 cut(s)	616, 682, 1055
BssECI	CCNNGG	6 cut(s)	93, 669, 1171, 1492, 2028, 2109
BssMI	GATC	5 cut(s)	3, 130, 181, 307, 1382
BssNAI	GTATAC	1 cut(s)	384
BssSI	CACGAG	1 cut(s)	389
BssT1I	CCWWGG	3 cut(s)	669, 1171, 2109
Bst1107I	GTATAC	1 cut(s)	384
Bst2BI	CACGAG	1 cut(s)	389
Bst2UI	CCWGG	3 cut(s)	312, 1493, 1804
Bst4CI	ACNGT	6 cut(s)	235, 353, 718, 822, 902, 1610
Bst6I	CTCTTC	2 cut(s)	25, 2061
BstAFI	CTTAAG	1 cut(s)	976
BstAPI	GCANNNNNTGC	3 cut(s)	512, 521, 665
BstBAI	YACGTR	1 cut(s)	439
BstC8I	GCNNGC	7 cut(s)	46, 117, 799, 859, 1045, 1471, 1587
BstDEI	CTNAG	8 cut(s)	194, 472, 832, 910, 1238, 1430, 1857, 1951
BstDSI	CCRYGG	2 cut(s)	93, 2109
BstENI	CCTNNNNNAGG	1 cut(s)	979
BstF5I	GGATG	9 cut(s)	199, 537, 686, 897, 1069, 1093, 1135, 1502, 1799
BstFNI	CGCG	2 cut(s)	324, 1473
BstHHI	GCGC	1 cut(s)	1475
BstKTI	GATC	5 cut(s)	6, 133, 184, 310, 1385
BstMAI	GTCTC	5 cut(s)	197, 279, 503, 659, 2048
BstMBI	GATC	5 cut(s)	3, 130, 181, 307, 1382
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 330, 512, 521, 665, 1176, 1996
BstNI	CCWGG	3 cut(s)	312, 1493, 1804
BstNSI	RCATGY	2 cut(s)	801, 1772
BstPAI	GACNNNNGTC	1 cut(s)	1946
BstSCI	CCNGG	4 cut(s)	310, 394, 1491, 1802
BstSFI	CTRYAG	4 cut(s)	349, 964, 1629, 2094
BstSNI	TACGTA	1 cut(s)	439
BstUI	CGCG	2 cut(s)	324, 1473
BstV1I	GCAGC	1 cut(s)	1643
BstV2I	GAAGAC	1 cut(s)	436
BstX2I	RGATCY	2 cut(s)	130, 1382
BstXI	CCANNNNNNTGG	1 cut(s)	499
BstYI	RGATCY	2 cut(s)	130, 1382
BstZ17I	GTATAC	1 cut(s)	384
Bsu15I	ATCGAT	1 cut(s)	276
BsuI	GTATCC	1 cut(s)	2083
BsuRI	GGCC	6 cut(s)	343, 580, 711, 929, 1043, 1170
BsuTUI	ATCGAT	1 cut(s)	276
BtgI	CCRYGG	2 cut(s)	93, 2109
BtgZI	GCGATG	1 cut(s)	2064
BtsCI	GGATG	9 cut(s)	199, 537, 686, 897, 1069, 1093, 1135, 1502, 1799
BtsI	GCAGTG	1 cut(s)	1233
BtsIMutI	CAGTG	3 cut(s)	231, 675, 1233
BveI	ACCTGC	1 cut(s)	1104
Cac8I	GCNNGC	7 cut(s)	46, 117, 799, 859, 1045, 1471, 1587
CaiI	CAGNNNCTG	2 cut(s)	512, 1050
CciI	TCATGA	1 cut(s)	82
CfoI	GCGC	1 cut(s)	1475
Cfr13I	GGNCC	3 cut(s)	578, 709, 1927
ClaI	ATCGAT	1 cut(s)	276
Csp6I	GTAC	5 cut(s)	255, 481, 598, 640, 907
CviQI	GTAC	5 cut(s)	255, 481, 598, 640, 907
DdeI	CTNAG	8 cut(s)	194, 472, 832, 910, 1238, 1430, 1857, 1951
DpnI	GATC	5 cut(s)	5, 132, 183, 309, 1384
DpnII	GATC	5 cut(s)	3, 130, 181, 307, 1382
EaeI	YGGCCR	2 cut(s)	927, 1168
Eam1104I	CTCTTC	2 cut(s)	25, 2061
EarI	CTCTTC	2 cut(s)	25, 2061
EciI	GGCGGA	1 cut(s)	1762
Ecl136II	GAGCTC	1 cut(s)	1355
Eco105I	TACGTA	1 cut(s)	439
Eco130I	CCWWGG	3 cut(s)	669, 1171, 2109
Eco24I	GRGCYC	1 cut(s)	1357
Eco32I	GATATC	1 cut(s)	838
Eco47I	GGWCC	1 cut(s)	1927
Eco53kI	GAGCTC	1 cut(s)	1355
Eco57I	CTGAAG	1 cut(s)	322
EcoICRI	GAGCTC	1 cut(s)	1355
EcoNI	CCTNNNNNAGG	1 cut(s)	979
EcoO109I	RGGNCCY	1 cut(s)	578
EcoRI	GAATTC	2 cut(s)	785, 1079
EcoRII	CCWGG	3 cut(s)	310, 1491, 1802
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	3 cut(s)	669, 1171, 2109
EcoT22I	ATGCAT	3 cut(s)	799, 1093, 1449
EcoT38I	GRGCYC	1 cut(s)	1357
ErhI	CCWWGG	3 cut(s)	669, 1171, 2109
FalI	AAGNNNNNCTT	6 cut(s)	508, 540, 1149, 1181, 1988, 2020
FaqI	GGGAC	2 cut(s)	604, 1995
FblI	GTMKAC	1 cut(s)	383
Fnu4HI	GCNGC	1 cut(s)	1632
FokI	GGATG	9 cut(s)	186, 524, 693, 904, 1076, 1100, 1142, 1509, 1786
FriOI	GRGCYC	1 cut(s)	1357
Fsp4HI	GCNGC	1 cut(s)	1632
FspBI	CTAG	2 cut(s)	1388, 1460
GlaI	GCGC	1 cut(s)	1474
GluI	GCNGC	1 cut(s)	1632
GsaI	CCCAGC	1 cut(s)	403
GsuI	CTGGAG	2 cut(s)	754, 1644
HaeIII	GGCC	6 cut(s)	343, 580, 711, 929, 1043, 1170
HapII	CCGG	1 cut(s)	395
HhaI	GCGC	1 cut(s)	1475
Hin6I	GCGC	1 cut(s)	1473
HinP1I	GCGC	1 cut(s)	1473
HincII	GTYRAC	1 cut(s)	469
HindII	GTYRAC	1 cut(s)	469
HindIII	AAGCTT	1 cut(s)	566
HinfI	GANTC	6 cut(s)	147, 470, 703, 1296, 1329, 2099
HpaII	CCGG	1 cut(s)	395
HphI	GGTGA	1 cut(s)	415
Hpy166II	GTNNAC	4 cut(s)	384, 469, 1192, 1927
Hpy188III	TCNNGA	5 cut(s)	83, 733, 841, 1547, 1661
Hpy8I	GTNNAC	4 cut(s)	384, 469, 1192, 1927
HpyAV	CCTTC	7 cut(s)	346, 371, 975, 1054, 1944, 1958, 2011
HpyCH4III	ACNGT	6 cut(s)	235, 353, 718, 822, 902, 1610
HpyCH4IV	ACGT	4 cut(s)	438, 649, 808, 1947
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 330, 512, 521, 665, 1176, 1996
HpyF3I	CTNAG	8 cut(s)	194, 472, 832, 910, 1238, 1430, 1857, 1951
HpySE526I	ACGT	4 cut(s)	438, 649, 808, 1947
HspAI	GCGC	1 cut(s)	1473
Kzo9I	GATC	5 cut(s)	3, 130, 181, 307, 1382
LmnI	GCTCC	3 cut(s)	98, 735, 1663
Lsp1109I	GCAGC	1 cut(s)	1643
MaeI	CTAG	2 cut(s)	1388, 1460
MaeII	ACGT	4 cut(s)	438, 649, 808, 1947
MaeIII	GTNAC	4 cut(s)	365, 673, 1610, 1624
MalI	GATC	5 cut(s)	5, 132, 183, 309, 1384
MboI	GATC	5 cut(s)	3, 130, 181, 307, 1382
MfeI	CAATTG	2 cut(s)	493, 1476
MflI	RGATCY	2 cut(s)	130, 1382
MhlI	GDGCHC	1 cut(s)	1357
MlsI	TGGCCA	2 cut(s)	929, 1170
MluNI	TGGCCA	2 cut(s)	929, 1170
MlyI	GAGTC	1 cut(s)	464
MmeI	TCCRAC	1 cut(s)	1599
Mox20I	TGGCCA	2 cut(s)	929, 1170
Mph1103I	ATGCAT	3 cut(s)	799, 1093, 1449
MroXI	GAANNNNTTC	3 cut(s)	758, 901, 1151
MscI	TGGCCA	2 cut(s)	929, 1170
MslI	CAYNNNNRTG	4 cut(s)	20, 87, 1308, 1903
Msp20I	TGGCCA	2 cut(s)	929, 1170
MspA1I	CMGCKG	1 cut(s)	206
MspCI	CTTAAG	1 cut(s)	976
MspI	CCGG	1 cut(s)	395
MspR9I	CCNGG	4 cut(s)	312, 396, 1493, 1804
MunI	CAATTG	2 cut(s)	493, 1476
Mva1269I	GAATGC	1 cut(s)	1768
MvaI	CCWGG	3 cut(s)	312, 1493, 1804
MvnI	CGCG	2 cut(s)	324, 1473
MwoI	GCNNNNNNNGC	7 cut(s)	98, 330, 512, 521, 665, 1176, 1996
NciI	CCSGG	1 cut(s)	396
NcoI	CCATGG	1 cut(s)	2109
NdeII	GATC	5 cut(s)	3, 130, 181, 307, 1382
NlaIV	GGNNCC	3 cut(s)	579, 1246, 1384
NmeAIII	GCCGAG	1 cut(s)	51
NmuCI	GTSAC	1 cut(s)	673
NsiI	ATGCAT	3 cut(s)	799, 1093, 1449
NspI	RCATGY	2 cut(s)	801, 1772
PaeI	GCATGC	1 cut(s)	801
PagI	TCATGA	1 cut(s)	82
PctI	GAATGC	1 cut(s)	1768
PdmI	GAANNNNTTC	3 cut(s)	758, 901, 1151
PfeI	GAWTC	5 cut(s)	147, 703, 1296, 1329, 2099
PflMI	CCANNNNNTGG	1 cut(s)	1050
PfoI	TCCNGGA	1 cut(s)	1802
PkrI	GCNGC	1 cut(s)	1633
PleI	GAGTC	1 cut(s)	464
PpsI	GAGTC	1 cut(s)	464
Ppu21I	YACGTR	1 cut(s)	439
PshAI	GACNNNNGTC	1 cut(s)	1946
PshBI	ATTAAT	1 cut(s)	168
Psp124BI	GAGCTC	1 cut(s)	1357
Psp6I	CCWGG	3 cut(s)	310, 1491, 1802
PspFI	CCCAGC	1 cut(s)	399
PspGI	CCWGG	3 cut(s)	310, 1491, 1802
PspN4I	GGNNCC	3 cut(s)	579, 1246, 1384
PspPI	GGNCC	3 cut(s)	578, 709, 1927
PstI	CTGCAG	1 cut(s)	1633
PstNI	CAGNNNCTG	2 cut(s)	512, 1050
PsuI	RGATCY	2 cut(s)	130, 1382
PvuII	CAGCTG	1 cut(s)	206
RsaI	GTAC	5 cut(s)	256, 482, 599, 641, 908
RsaNI	GTAC	5 cut(s)	255, 481, 598, 640, 907
RseI	CAYNNNNRTG	4 cut(s)	20, 87, 1308, 1903
SacI	GAGCTC	1 cut(s)	1357
SatI	GCNGC	1 cut(s)	1632
Sau3AI	GATC	5 cut(s)	3, 130, 181, 307, 1382
Sau96I	GGNCC	3 cut(s)	578, 709, 1927
ScaI	AGTACT	2 cut(s)	599, 641
SchI	GAGTC	1 cut(s)	464
ScrFI	CCNGG	4 cut(s)	312, 396, 1493, 1804
SduI	GDGCHC	1 cut(s)	1357
SfcI	CTRYAG	4 cut(s)	349, 964, 1629, 2094
SinI	GGWCC	1 cut(s)	1927
SmiMI	CAYNNNNRTG	4 cut(s)	20, 87, 1308, 1903
SmlI	CTYRAG	1 cut(s)	976
SmoI	CTYRAG	1 cut(s)	976
SnaBI	TACGTA	1 cut(s)	439
SphI	GCATGC	1 cut(s)	801
SsiI	CCGC	3 cut(s)	229, 1747, 1930
SspI	AATATT	2 cut(s)	881, 1681
SspMI	CTAG	2 cut(s)	1388, 1460
SstI	GAGCTC	1 cut(s)	1357
StyD4I	CCNGG	4 cut(s)	310, 394, 1491, 1802
StyI	CCWWGG	3 cut(s)	669, 1171, 2109
TaaI	ACNGT	6 cut(s)	235, 353, 718, 822, 902, 1610
TaiI	ACGT	4 cut(s)	441, 652, 811, 1950
TaqI	TCGA	3 cut(s)	145, 276, 2102
TatI	WGTACW	3 cut(s)	480, 597, 639
TfiI	GAWTC	5 cut(s)	147, 703, 1296, 1329, 2099
TscAI	CASTG	3 cut(s)	238, 682, 1233
TseFI	GTSAC	1 cut(s)	673
TseI	GCWGC	1 cut(s)	1631
Tsp45I	GTSAC	1 cut(s)	673
TspGWI	ACGGA	2 cut(s)	623, 1612
TspRI	CASTG	3 cut(s)	238, 682, 1233
Van91I	CCANNNNNTGG	1 cut(s)	1050
Vha464I	CTTAAG	1 cut(s)	976
VpaK11BI	GGWCC	1 cut(s)	1927
VspI	ATTAAT	1 cut(s)	168
XagI	CCTNNNNNAGG	1 cut(s)	979
XapI	RAATTY	4 cut(s)	785, 1079, 1555, 1777
XceI	RCATGY	2 cut(s)	801, 1772
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1178
XmiI	GTMKAC	1 cut(s)	383
XmnI	GAANNNNTTC	3 cut(s)	758, 901, 1151
XspI	CTAG	2 cut(s)	1388, 1460
ZrmI	AGTACT	2 cut(s)	599, 641
Zsp2I	ATGCAT	3 cut(s)	799, 1093, 1449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.