Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0009813

Physical Location & Seq

Genomic Coordinates Forward (+)

1372119 .. 1424798

Gene Structure 52680 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0017700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAATATCCTGCCTCTGCTGAAGCTTTTGCTTTTCTTGGTTGTAATTGTGTTCCCAAGTATTGTTGAACCAATTAGCAAAGCAGCCGATGATCAGGTCTGCCCAGTTCAGAGGTGTAGGCATGATGGTCCCCTTATCCAGTTTCCATTCCGTCTACAACACTATCCCCTTCACTGTGGCCATCCAGAGTTTGAGGTTACCTGCAGCAGCTTCACCAACATGACCATGATGAAGCTTTCCTCATCATCAGGGTTCTTTCTAATACAAACAATCGATTACGAGAGACAACAGTTTCGTGTGTATGATGAGGATGGTTGCCTCCCGAGACGCCTTCTTAACTTTAATCTCTCCTTTTCGCTCTTTCAACCATCACCAGATTACCAAGATTGCGGTTCCTATTACTATTACGAAAACAATTTGAGGAACTTGACGTTGTTAAATTGTACCACTATCATGGCACAAATCCTTACCAGCGCGGAGATCAAATGTCTGGGTGTCCCAGGGCATTACCAAGTTCTGGCTGTTAATCGGTCTTTTGATATATCTCACTTGGTAGGTAGTGCTTGCTCTTCTTTGCCAGAACTCTTTCTTCCATTTGGACATATGCAGGATGATAGCTGTGAACCAGACACTGGTTTATTGCTGGAATGGAGTGAATCGCATTTCCCAGAATGTCAAAACTGTAGAGGAAGCTGCTATTTCAGTTACAGCAGCAATCAAGTCTTGAAGTGTTATCCTCGAAAACACAAAGGTCTATCAACTAGGTTTATTGTCATGGGAGTGAGTGTATGTGGGTTTGTTGTCTTGTCAACTACGGCGGTAGCCATCTTTTACCATTTAAAGCAATCAATAAAGAGGAGAGAGGAAAAGGAGAATCAAAGAAAGATTGAAAAGTTCCTAGATGATCACAAGTCCCATGTACCAACAAGATACTCCTATGCTGATATAAAGAAGATGACAAATGGATTCAAGAAGAAGTTGGGTGAAGGCGGTTTTGGAAGTGTTTTCAGTGGAAAGCTTCCCACTAATGGAGTGCCAGTTGCTGTAAAAGTCCTCAAGGATTCTAAAGGAAGTGGAGAATATTTTGTTAACGAAGTGGGAACCATTGGCAGGATTCACCATGTAAACGTGGTTCGCCTACTTGGGTTTTCAGCTGAAGGAGGGAACCGTGCTCTTATTTACGAGCTCATGCCAAACAGGTCCCTAGAGAAGTTCATCAAATCTAGAGGATCAAATAAGAGCGGGATTTCATTTAACTGGGAGAAACTTTGCAACATCATCACAGGTATAGCAAAGGGAATCGAGTACCTTCACCAAGGGTGTGACCAGAGGATTCTCCACTTTGATATCAAGCCTCACAATATCTTGTTAGACCATGCCTTTAATCCGAAGATTTCTGATTTTGGTATGGCTAAACTCTGTTCCAAGGAAGATAGTGTTATATCTATGACTGCTGCCAGAGGCACTACGGGCTACATTGCGCCTGAAGTATTTAATGGGAACTTCGGAACTGTCTCCTACAAATCGGATGTGTATAGTTTCGGGATGCTAGTTCTTGAAGTTATTGGAGCTATGAAGGAAACTGCTGTTACATCTAGCGACAATGAGGTGTATTTTCCTGAATTGATTTACAAGTGTCTGATCCAGGGAGAAGAGTTGGATTTGGAGCTAGCTGATGATGGAGATGCTCAGATTGCTAAGAGATTAGCAATTGTGGCACTTTGGTGCATCCAGTGGTACCCAGTGAGTCGCCCTTCCATGAAAGCAGTTGTTAGAATGCTGGAAGGACCCTCTGAAAGCTTGATCATGCCACCCAATCCGTTTGCTTCCACGACTCAGATGGAACCAGCAACAACCCCATCAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005911 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0012505 GO:0016020 GO:0030054 GO:0031090 GO:0031974 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0070013 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04141 ko04145 ko04612 ko05142 ko05166 map04141 map04145 map04612 map05142 map05166

Pfam Domains

Protein Families

Calreticulin

Protein Analysis

622

Amino Acids

69.78

Weight (kDa)

6.99

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	34 - 102	6.8e-14	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	323 - 594	1.7e-41	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	324 - 592	2.3e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0009813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09210 AT1G56340 AT1G56340
fragaria_vesca	FvH4_6g07360
malus_domestica	MD04G1194200.v1.1 MD12G1206700.v1.1
prunus_persica	Prupe.6G313900_v2.0.a1
pyrus_communis	pycom04g17170 pycom12g19460
rosa_chinensis	RchiOBHm_Chr3g0456961
rosa_laevigata	RLG00000025259
rosa_multiflora	Rmu_sc0016008.1_g000004 Rmu_sc0032731.1_g000001
rosa_roxburghii	Rroxscaffold_6G00422330
rosa_rugosa	Rorug03G0017700 Rorug03G0017800
rosa_samantha	Rh3AG077700 Rh3BG079600 Rh3CG079500 Rh3DG081300
rosa_wichuraiana	Rw3G006660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	209
Acc65I	GGTACC	1 cut(s)	1737
AccB1I	GGYRCC	1 cut(s)	1737
AccB7I	CCANNNNNTGG	2 cut(s)	517, 632
AccBSI	CCGCTC	1 cut(s)	1242
AccI	GTMKAC	1 cut(s)	154
AccII	CGCG	1 cut(s)	476
AciI	CCGC	5 cut(s)	390, 476, 818, 990, 1242
AclWI	GGATC	2 cut(s)	1237, 1636
AcoI	YGGCCR	1 cut(s)	178
AcuI	CTGAAG	3 cut(s)	41, 1176, 1506
AcyI	GRCGYC	1 cut(s)	328
AfaI	GTAC	4 cut(s)	445, 921, 1307, 1739
AfiI	CCNNNNNNNGG	4 cut(s)	517, 632, 1028, 1110
AgsI	TTSAA	6 cut(s)	68, 365, 727, 890, 970, 1559
AjnI	CCWGG	2 cut(s)	499, 1644
AjuI	GAANNNNNNNTTGG	2 cut(s)	978, 1010
AleI	CACNNNNGTG	1 cut(s)	1723
Alw21I	GWGCWC	2 cut(s)	1174, 1188
Alw26I	GTCTC	3 cut(s)	277, 319, 1519
AlwI	GGATC	2 cut(s)	1237, 1636
AlwNI	CAGNNNCTG	2 cut(s)	632, 1043
Ama87I	CYCGRG	1 cut(s)	322
AoxI	GGCC	1 cut(s)	178
ApeKI	GCWGC	6 cut(s)	83, 204, 207, 693, 711, 1454
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
Asp700I	GAANNNNTTC	1 cut(s)	585
Asp718I	GGTACC	1 cut(s)	1737
AspLEI	GCGC	2 cut(s)	476, 1483
AspS9I	GGNCC	3 cut(s)	128, 1200, 1787
AsuHPI	GGTGA	5 cut(s)	205, 363, 995, 1109, 1304
AsuNHI	GCTAGC	1 cut(s)	1669
AvaI	CYCGRG	1 cut(s)	322
AvaII	GGWCC	3 cut(s)	128, 1200, 1787
BalI	TGGCCA	1 cut(s)	180
BanI	GGYRCC	1 cut(s)	1737
BanII	GRGCYC	1 cut(s)	1188
Bbv12I	GWGCWC	2 cut(s)	1174, 1188
BbvI	GCAGC	6 cut(s)	95, 216, 219, 680, 723, 1441
BccI	CCATC	8 cut(s)	119, 189, 305, 376, 833, 1673, 1834, 1867
BceAI	ACGGC	1 cut(s)	831
BciT130I	CCWGG	2 cut(s)	501, 1646
BclI	TGATCA	3 cut(s)	91, 904, 1803
BcoDI	GTCTC	3 cut(s)	277, 319, 1519
BfaI	CTAG	7 cut(s)	762, 899, 1205, 1224, 1550, 1596, 1670
BfmI	CTRYAG	2 cut(s)	202, 682
BfuAI	ACCTGC	1 cut(s)	209
BisI	GCNGC	6 cut(s)	84, 205, 208, 694, 712, 1455
BlsI	GCNGC	6 cut(s)	85, 206, 209, 695, 713, 1456
Bme1390I	CCNGG	2 cut(s)	501, 1646
Bme18I	GGWCC	3 cut(s)	128, 1200, 1787
BmeT110I	CYCGRG	1 cut(s)	322
BmgT120I	GGNCC	3 cut(s)	128, 1200, 1787
BmiI	GGNNCC	8 cut(s)	130, 394, 1102, 1166, 1202, 1739, 1789, 1845
BmrFI	CCNGG	2 cut(s)	501, 1646
BmrI	ACTGGG	3 cut(s)	98, 1267, 1736
BmsI	GCATC	3 cut(s)	1536, 1675, 1737
BmtI	GCTAGC	1 cut(s)	1673
BmuI	ACTGGG	3 cut(s)	98, 1267, 1736
BpuEI	CTTGAG	1 cut(s)	1040
Bsa29I	ATCGAT	1 cut(s)	273
BsaHI	GRCGYC	1 cut(s)	328
BsaJI	CCNNGG	5 cut(s)	499, 500, 1315, 1425, 1645
BsaXI	ACNNNNNCTCC	4 cut(s)	771, 801, 1023, 1053
Bsc4I	CCNNNNNNNGG	4 cut(s)	517, 632, 1028, 1110
Bse1I	ACTGG	7 cut(s)	104, 139, 637, 1037, 1262, 1732, 1742
Bse3DI	GCAATG	1 cut(s)	1476
BseBI	CCWGG	2 cut(s)	501, 1646
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	5 cut(s)	499, 500, 1315, 1425, 1645
BseGI	GGATG	6 cut(s)	181, 316, 616, 1534, 1551, 1728
BseLI	CCNNNNNNNGG	4 cut(s)	517, 632, 1028, 1110
BseMI	GCAATG	1 cut(s)	1476
BseMII	CTCAG	2 cut(s)	1703, 1850
BseNI	ACTGG	7 cut(s)	104, 139, 637, 1037, 1262, 1732, 1742
BseRI	GAGGAG	1 cut(s)	871
BseXI	GCAGC	6 cut(s)	95, 216, 219, 680, 723, 1441
Bsh1236I	CGCG	1 cut(s)	476
BshFI	GGCC	1 cut(s)	180
BshNI	GGYRCC	1 cut(s)	1737
BshVI	ATCGAT	1 cut(s)	273
BsiHKAI	GWGCWC	2 cut(s)	1174, 1188
BsiHKCI	CYCGRG	1 cut(s)	322
BslFI	GGGAC	4 cut(s)	114, 482, 898, 1186
BslI	CCNNNNNNNGG	4 cut(s)	517, 632, 1028, 1110
BsmAI	GTCTC	3 cut(s)	277, 319, 1519
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	4 cut(s)	114, 482, 898, 1186
BsmI	GAATGC	1 cut(s)	1782
BsnI	GGCC	1 cut(s)	180
BsoBI	CYCGRG	1 cut(s)	322
Bsp1286I	GDGCHC	2 cut(s)	1174, 1188
Bsp143I	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
BspACI	CCGC	5 cut(s)	390, 476, 818, 990, 1242
BspANI	GGCC	1 cut(s)	180
BspCNI	CTCAG	2 cut(s)	1702, 1849
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	476
BspLI	GGNNCC	8 cut(s)	130, 394, 1102, 1166, 1202, 1739, 1789, 1845
BspMAI	CTGCAG	1 cut(s)	206
BspMI	ACCTGC	1 cut(s)	209
BspOI	GCTAGC	1 cut(s)	1673
BspPI	GGATC	2 cut(s)	1237, 1636
BspQI	GCTCTTC	1 cut(s)	574
BspT107I	GGYRCC	1 cut(s)	1737
BsrBI	CCGCTC	1 cut(s)	1242
BsrDI	GCAATG	1 cut(s)	1476
BsrI	ACTGG	7 cut(s)	104, 139, 637, 1037, 1262, 1732, 1742
BssECI	CCNNGG	5 cut(s)	499, 500, 1315, 1425, 1645
BssMI	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
BssNI	GRCGYC	1 cut(s)	328
BssT1I	CCWWGG	2 cut(s)	1315, 1425
Bst2UI	CCWGG	2 cut(s)	501, 1646
Bst4CI	ACNGT	5 cut(s)	176, 291, 683, 1169, 1513
Bst6I	CTCTTC	2 cut(s)	574, 1647
BstACI	GRCGYC	1 cut(s)	328
BstC8I	GCNNGC	2 cut(s)	565, 1671
BstDEI	CTNAG	3 cut(s)	1689, 1698, 1836
BstEII	GGTNACC	1 cut(s)	196
BstF5I	GGATG	6 cut(s)	181, 316, 616, 1534, 1551, 1728
BstFNI	CGCG	1 cut(s)	476
BstHHI	GCGC	2 cut(s)	476, 1483
BstKTI	GATC	6 cut(s)	94, 483, 907, 1232, 1644, 1806
BstMAI	GTCTC	3 cut(s)	277, 319, 1519
BstMBI	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
BstMWI	GCNNNNNNNGC	3 cut(s)	1470, 1694, 1715
BstNI	CCWGG	2 cut(s)	501, 1646
BstPI	GGTNACC	1 cut(s)	196
BstSCI	CCNGG	2 cut(s)	499, 1644
BstSFI	CTRYAG	2 cut(s)	202, 682
BstUI	CGCG	1 cut(s)	476
BstV1I	GCAGC	6 cut(s)	95, 216, 219, 680, 723, 1441
BstXI	CCANNNNNNTGG	1 cut(s)	454
Bsu15I	ATCGAT	1 cut(s)	273
BsuRI	GGCC	1 cut(s)	180
BsuTUI	ATCGAT	1 cut(s)	273
BtsCI	GGATG	6 cut(s)	181, 316, 616, 1534, 1551, 1728
BtsIMutI	CAGTG	5 cut(s)	172, 630, 1015, 1739, 1749
BveI	ACCTGC	1 cut(s)	209
Cac8I	GCNNGC	2 cut(s)	565, 1671
CaiI	CAGNNNCTG	2 cut(s)	632, 1043
CfoI	GCGC	2 cut(s)	476, 1483
Cfr13I	GGNCC	3 cut(s)	128, 1200, 1787
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	4 cut(s)	444, 920, 1306, 1738
CviQI	GTAC	4 cut(s)	444, 920, 1306, 1738
DdeI	CTNAG	3 cut(s)	1689, 1698, 1836
DpnI	GATC	6 cut(s)	93, 482, 906, 1231, 1643, 1805
DpnII	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
DraI	TTTAAA	1 cut(s)	840
EaeI	YGGCCR	1 cut(s)	178
Eam1104I	CTCTTC	2 cut(s)	574, 1647
EarI	CTCTTC	2 cut(s)	574, 1647
Ecl136II	GAGCTC	1 cut(s)	1186
Eco130I	CCWWGG	2 cut(s)	1315, 1425
Eco24I	GRGCYC	1 cut(s)	1188
Eco32I	GATATC	1 cut(s)	1348
Eco47I	GGWCC	3 cut(s)	128, 1200, 1787
Eco53kI	GAGCTC	1 cut(s)	1186
Eco57I	CTGAAG	3 cut(s)	41, 1176, 1506
Eco88I	CYCGRG	1 cut(s)	322
Eco91I	GGTNACC	1 cut(s)	196
EcoICRI	GAGCTC	1 cut(s)	1186
EcoO109I	RGGNCCY	2 cut(s)	1200, 1787
EcoO65I	GGTNACC	1 cut(s)	196
EcoRII	CCWGG	2 cut(s)	499, 1644
EcoRV	GATATC	1 cut(s)	1348
EcoT14I	CCWWGG	2 cut(s)	1315, 1425
EcoT38I	GRGCYC	1 cut(s)	1188
ErhI	CCWWGG	2 cut(s)	1315, 1425
Esp3I	CGTCTC	1 cut(s)	319
FaqI	GGGAC	4 cut(s)	114, 482, 898, 1186
FauI	CCCGC	1 cut(s)	1235
FauNDI	CATATG	1 cut(s)	603
FbaI	TGATCA	3 cut(s)	91, 904, 1803
FblI	GTMKAC	1 cut(s)	154
Fnu4HI	GCNGC	6 cut(s)	84, 205, 208, 694, 712, 1455
FokI	GGATG	6 cut(s)	168, 323, 623, 1541, 1558, 1715
FriOI	GRGCYC	1 cut(s)	1188
Fsp4HI	GCNGC	6 cut(s)	84, 205, 208, 694, 712, 1455
FspBI	CTAG	7 cut(s)	762, 899, 1205, 1224, 1550, 1596, 1670
GlaI	GCGC	2 cut(s)	475, 1482
GluI	GCNGC	6 cut(s)	84, 205, 208, 694, 712, 1455
HaeIII	GGCC	1 cut(s)	180
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	2 cut(s)	476, 1483
Hin1I	GRCGYC	1 cut(s)	328
Hin6I	GCGC	2 cut(s)	474, 1481
HinP1I	GCGC	2 cut(s)	474, 1481
HincII	GTYRAC	2 cut(s)	810, 1090
HindII	GTYRAC	2 cut(s)	810, 1090
HindIII	AAGCTT	4 cut(s)	23, 233, 1016, 1798
HinfI	GANTC	9 cut(s)	656, 874, 966, 1061, 1114, 1299, 1333, 1747, 1834
HpaI	GTTAAC	1 cut(s)	1090
HphI	GGTGA	5 cut(s)	205, 363, 995, 1109, 1304
Hpy166II	GTNNAC	5 cut(s)	155, 623, 810, 1090, 1126
Hpy188I	TCNGA	9 cut(s)	111, 1389, 1399, 1508, 1528, 1641, 1692, 1795, 1839
Hpy188III	TCNNGA	8 cut(s)	185, 322, 724, 970, 1224, 1543, 1556, 1619
Hpy8I	GTNNAC	5 cut(s)	155, 623, 810, 1090, 1126
HpyAV	CCTTC	8 cut(s)	179, 341, 980, 1151, 1319, 1570, 1764, 1778
HpyCH4III	ACNGT	5 cut(s)	176, 291, 683, 1169, 1513
HpyCH4IV	ACGT	2 cut(s)	431, 1128
HpyCH4V	TGCA	4 cut(s)	204, 607, 1272, 1728
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1470, 1694, 1715
HpyF3I	CTNAG	3 cut(s)	1689, 1698, 1836
HpySE526I	ACGT	2 cut(s)	431, 1128
Hsp92I	GRCGYC	1 cut(s)	328
HspAI	GCGC	2 cut(s)	474, 1481
KpnI	GGTACC	1 cut(s)	1741
Ksp22I	TGATCA	3 cut(s)	91, 904, 1803
KspAI	GTTAAC	1 cut(s)	1090
Kzo9I	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
LguI	GCTCTTC	1 cut(s)	574
LmnI	GCTCC	2 cut(s)	1568, 1666
Lsp1109I	GCAGC	6 cut(s)	95, 216, 219, 680, 723, 1441
LweI	GCATC	3 cut(s)	1536, 1675, 1737
MaeI	CTAG	7 cut(s)	762, 899, 1205, 1224, 1550, 1596, 1670
MaeII	ACGT	2 cut(s)	431, 1128
MaeIII	GTNAC	4 cut(s)	196, 704, 1322, 1588
MalI	GATC	6 cut(s)	93, 482, 906, 1231, 1643, 1805
MbiI	CCGCTC	1 cut(s)	1242
MboI	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
MboII	GAAGA	7 cut(s)	561, 581, 964, 985, 1402, 1442, 1664
MfeI	CAATTG	1 cut(s)	1710
MhlI	GDGCHC	2 cut(s)	1174, 1188
MlsI	TGGCCA	1 cut(s)	180
MluCI	AATT	6 cut(s)	45, 72, 415, 439, 1622, 1710
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	2 cut(s)	1756, 1828
MmeI	TCCRAC	1 cut(s)	1638
Mox20I	TGGCCA	1 cut(s)	180
MroXI	GAANNNNTTC	1 cut(s)	585
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	9 cut(s)	336, 342, 437, 525, 839, 1089, 1254, 1383, 1494
MslI	CAYNNNNRTG	5 cut(s)	218, 224, 452, 779, 1723
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	1 cut(s)	1154
MspR9I	CCNGG	2 cut(s)	501, 1646
MunI	CAATTG	1 cut(s)	1710
Mva1269I	GAATGC	1 cut(s)	1782
MvaI	CCWGG	2 cut(s)	501, 1646
MvnI	CGCG	1 cut(s)	476
MwoI	GCNNNNNNNGC	3 cut(s)	1470, 1694, 1715
NdeI	CATATG	1 cut(s)	603
NdeII	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
NheI	GCTAGC	1 cut(s)	1669
NlaIV	GGNNCC	8 cut(s)	130, 394, 1102, 1166, 1202, 1739, 1789, 1845
NmuCI	GTSAC	1 cut(s)	1322
OliI	CACNNNNGTG	1 cut(s)	1723
PasI	CCCWGGG	1 cut(s)	500
PciSI	GCTCTTC	1 cut(s)	574
PctI	GAATGC	1 cut(s)	1782
PdmI	GAANNNNTTC	1 cut(s)	585
PfeI	GAWTC	7 cut(s)	656, 874, 966, 1061, 1114, 1299, 1333
PflMI	CCANNNNNTGG	2 cut(s)	517, 632
PkrI	GCNGC	6 cut(s)	85, 206, 209, 695, 713, 1456
PleI	GAGTC	2 cut(s)	1755, 1828
PpsI	GAGTC	2 cut(s)	1755, 1828
PpuMI	RGGWCCY	2 cut(s)	1200, 1787
Psp124BI	GAGCTC	1 cut(s)	1188
Psp5II	RGGWCCY	2 cut(s)	1200, 1787
Psp6I	CCWGG	2 cut(s)	499, 1644
PspEI	GGTNACC	1 cut(s)	196
PspGI	CCWGG	2 cut(s)	499, 1644
PspN4I	GGNNCC	8 cut(s)	130, 394, 1102, 1166, 1202, 1739, 1789, 1845
PspPI	GGNCC	3 cut(s)	128, 1200, 1787
PspPPI	RGGWCCY	2 cut(s)	1200, 1787
PsrI	GAACNNNNNNTAC	2 cut(s)	1116, 1148
PstI	CTGCAG	1 cut(s)	206
PstNI	CAGNNNCTG	2 cut(s)	632, 1043
PvuII	CAGCTG	1 cut(s)	1154
RsaI	GTAC	4 cut(s)	445, 921, 1307, 1739
RsaNI	GTAC	4 cut(s)	444, 920, 1306, 1738
RseI	CAYNNNNRTG	5 cut(s)	218, 224, 452, 779, 1723
SacI	GAGCTC	1 cut(s)	1188
SapI	GCTCTTC	1 cut(s)	574
SaqAI	TTAA	9 cut(s)	336, 342, 437, 525, 839, 1089, 1254, 1383, 1494
SatI	GCNGC	6 cut(s)	84, 205, 208, 694, 712, 1455
Sau3AI	GATC	6 cut(s)	91, 480, 904, 1229, 1641, 1803
Sau96I	GGNCC	3 cut(s)	128, 1200, 1787
SchI	GAGTC	2 cut(s)	1756, 1828
ScrFI	CCNGG	2 cut(s)	501, 1646
SduI	GDGCHC	2 cut(s)	1174, 1188
SfaNI	GCATC	3 cut(s)	1536, 1675, 1737
SfcI	CTRYAG	2 cut(s)	202, 682
SinI	GGWCC	3 cut(s)	128, 1200, 1787
SmiMI	CAYNNNNRTG	5 cut(s)	218, 224, 452, 779, 1723
SmlI	CTYRAG	1 cut(s)	1055
SmoI	CTYRAG	1 cut(s)	1055
Sse9I	AATT	6 cut(s)	45, 72, 415, 439, 1622, 1710
SsiI	CCGC	5 cut(s)	390, 476, 818, 990, 1242
SspI	AATATT	1 cut(s)	1082
SspMI	CTAG	7 cut(s)	762, 899, 1205, 1224, 1550, 1596, 1670
SstI	GAGCTC	1 cut(s)	1188
StyD4I	CCNGG	2 cut(s)	499, 1644
StyI	CCWWGG	2 cut(s)	1315, 1425
TaaI	ACNGT	5 cut(s)	176, 291, 683, 1169, 1513
TaiI	ACGT	2 cut(s)	434, 1131
TaqI	TCGA	3 cut(s)	273, 739, 1302
TaqII	GACCGA	1 cut(s)	519
TasI	AATT	6 cut(s)	45, 72, 415, 439, 1622, 1710
TfiI	GAWTC	7 cut(s)	656, 874, 966, 1061, 1114, 1299, 1333
Tru1I	TTAA	9 cut(s)	336, 342, 437, 525, 839, 1089, 1254, 1383, 1494
Tru9I	TTAA	9 cut(s)	336, 342, 437, 525, 839, 1089, 1254, 1383, 1494
TscAI	CASTG	5 cut(s)	179, 637, 1015, 1739, 1749
TseFI	GTSAC	1 cut(s)	1322
TseI	GCWGC	6 cut(s)	83, 204, 207, 693, 711, 1454
Tsp45I	GTSAC	1 cut(s)	1322
TspDTI	ATGAA	6 cut(s)	17, 245, 1204, 1239, 1589, 1775
TspGWI	ACGGA	2 cut(s)	140, 1809
TspRI	CASTG	5 cut(s)	179, 637, 1015, 1739, 1749
Van91I	CCANNNNNTGG	2 cut(s)	517, 632
VpaK11BI	GGWCC	3 cut(s)	128, 1200, 1787
XbaI	TCTAGA	1 cut(s)	1223
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1837
XmiI	GTMKAC	1 cut(s)	154
XmnI	GAANNNNTTC	1 cut(s)	585
XspI	CTAG	7 cut(s)	762, 899, 1205, 1224, 1550, 1596, 1670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.