Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0009813

Physical Location & Seq

Genomic Coordinates Reverse (-)

1390882 .. 1400788

Gene Structure 9907 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0017800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGCCAAAAAGTATTCTGATAACTTGTGTTCTTATTTGCTTTGCAATTTATCATGATGATGCCAAGGCAGAACAGCACTGTCCGCCAGCTTCTTGTGGGGATCTCCATGACATTAGGTACCCGTTTCGCTTGAAAATTAATGGTACTACTGTTAATAATTGTGTAATCTCTCCATCGCATGCTGAACTTTCATGTGAGCAGAATCGCACCATTTTGAAACTTTTCAATGGTACATATTATGTCATGGGAATCGATTATGAATTGCAGACAATCCGGATTGTGGATCCTGGTCTACTAAGGGATACTTGCCCCTTTAGGCCGATTCACCCTTTGACAGGAGATTACTTTACCGCAAGCCTTTGCGGAAAACTCTACCGACCATATCACAGGTTGCGTAATAATGGGTATGCAACCTTCTATGATTGCCGGTCGAAAGTTGAGTCCCCAGACTACATAAAAATTAATTGCAGTAATAGCTCATCGCCGTGGTCATCTACTACATATTCTTACATTAAGCTGGGATATAGTGTGTCCCATCTTCTCCCGTCTTGTATTATCAAATCCATGACACTTTCCATGTTAGACGAACCTGGTAATGACCTTTCATTTTCTTTTATCCGCGATACGTTGAGAAAGGGATTTCAACTTCCATGGGACGATCTTGTTCCACACAATAATTGCTACAGCCCATTCCAGTCCTTTTATCGTTTTTGGGGTTTGGCACCAGTCGCCAAGATCACCGGAGTGAGTCTGCTTGTACGAATAGCACCCTGCATCATTGTTTTGCTGTATTTCTGGAGCTACAAACTGTATTCGAAAAATTACTTACTGTATAAGGCCGTCGAAGAATTCTTGGATGCGTACAAGAATCTTATGCCAAGCAGGTATTCATATTCAGAAATTAAGACGGTGACAAATGATTTCAAACATAAACTTGGTCAGGGAGGTTTTGGCTCTGTTTATAAAGGCCAGCTATCAAATGGTCATGTTGTTGCAGTAAAGATGTTGAATGGTTCTAAAGGTAAAGGGCAAGATTTCATCAATGAAGTTGCTACAATAGGAAGAATTCATCATGTCAATGTGGTGCAACTAATTGGATTCTGTTCCGAGGGGTCTAAAAGAGCTCTTGTTTATGATTACATGCCTAATGGATCCCTCGACAAATATATCTTGTGTGATGCAGAAAATAATCCTACTCTAACTTGGGATAGAATGCATGAGATAGCTCTAGGGGTGGCTCGTGCAATTGAATATCTACACCAAGGATGTGATATGCAAATTCTACATTTTGATATCAAGCCCCACAACATTCTCCTTGATGAAAACTTTAATTCCAAAATTTCAGACTTCGGGCTTGCAAGATTTTACCCTAGAGATCGTAACACAATTTCTGTCACTGCAGCAAGAGGCACAATGGGATATATAGCTCCAGAAATGTTTTACAAAACTATCGGTGGTGTTTCCTACAAAGCTGATGTTTATAGTTTTGGAATGTTGTTACTGGAAATGGCAGGGAGGAGGAAAAATTTGAATGCACATGCAGAACATTCGAGCCAAATATATTTCCCTTCGTGGATCTATGGTCAACTGGAAAAGGGATTGAGCATTGAAATTGAGGATGCCTGTGAGTATGACAAGAGAATAGCCAAGAAGATGCTCATGGTTGCTTTGTGGTGCATACAACTCATGCCTGTGGACCGCCCTTCAATGACCAAGGTTTTAGAGATGCTTGAAGGTGAAGATCAAGTCTTGCAAATGCCTCCAAAGCCGTTCTATTGTCCCCAACAGATGCCGACTGAGGATTTACCAGATGACAGCGATGAGACAGATATTGAAGAGGTATCCAACCTGCCACAGAGTGCTACAGAATCTACTTCCATGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005788 GO:0005911 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0012505 GO:0016020 GO:0030054 GO:0031090 GO:0031974 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0055044 GO:0070013 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04141 ko04145 ko04612 ko05142 ko05166 map04141 map04145 map04612 map05142 map05166

Pfam Domains

Protein Families

Calreticulin

Protein Analysis

628

Amino Acids

71.41

Weight (kDa)

6.42

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	27 - 95	2.3e-13	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	308 - 577	8.3e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	309 - 575	7.7e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09210 AT1G56340 AT1G56340
fragaria_vesca	FvH4_6g07360
malus_domestica	MD04G1194200.v1.1 MD12G1206700.v1.1
prunus_persica	Prupe.6G313900_v2.0.a1
pyrus_communis	pycom04g17170 pycom12g19460
rosa_chinensis	RchiOBHm_Chr3g0456961
rosa_laevigata	RLG00000025259
rosa_multiflora	Rmu_sc0016008.1_g000004 Rmu_sc0032731.1_g000001
rosa_roxburghii	Rroxscaffold_6G00422330
rosa_rugosa	Rorug03G0017700 Rorug03G0017800
rosa_samantha	Rh3AG077700 Rh3BG079600 Rh3CG079500 Rh3DG081300
rosa_wichuraiana	Rw3G006660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	963
Acc36I	ACCTGC	2 cut(s)	873, 1857
Acc65I	GGTACC	1 cut(s)	117
AccB1I	GGYRCC	2 cut(s)	117, 721
AccI	GTMKAC	1 cut(s)	292
AccII	CGCG	1 cut(s)	621
AccIII	TCCGGA	1 cut(s)	273
AciI	CCGC	5 cut(s)	83, 351, 363, 619, 1699
AclWI	GGATC	6 cut(s)	108, 278, 291, 1146, 1159, 1583
AcsI	RAATTY	5 cut(s)	848, 1065, 1278, 1338, 1525
AdeI	CACNNNGTG	1 cut(s)	1859
AfaI	GTAC	5 cut(s)	119, 145, 232, 759, 863
AfiI	CCNNNNNNNGG	2 cut(s)	280, 335
AjnI	CCWGG	2 cut(s)	286, 589
AjuI	GAANNNNNNNTTGG	2 cut(s)	871, 903
AleI	CACNNNNGTG	1 cut(s)	743
AluBI	AGCT	9 cut(s)	89, 477, 517, 801, 973, 1124, 1226, 1427, 1472
AluI	AGCT	9 cut(s)	89, 477, 517, 801, 973, 1124, 1226, 1427, 1472
Alw21I	GWGCWC	1 cut(s)	1126
Alw26I	GTCTC	1 cut(s)	1817
AlwI	GGATC	6 cut(s)	108, 278, 291, 1146, 1159, 1583
Aor13HI	TCCGGA	1 cut(s)	273
AoxI	GGCC	3 cut(s)	317, 837, 967
ApeKI	GCWGC	1 cut(s)	1400
ApoI	RAATTY	5 cut(s)	848, 1065, 1278, 1338, 1525
ArsI	GACNNNNNNTTYG	2 cut(s)	425, 457
AseI	ATTAAT	2 cut(s)	138, 462
Asp700I	GAANNNNTTC	1 cut(s)	221
Asp718I	GGTACC	1 cut(s)	117
AspS9I	GGNCC	1 cut(s)	1696
AsuHPI	GGTGA	4 cut(s)	317, 730, 922, 1748
AsuII	TTCGAA	1 cut(s)	815
AvaII	GGWCC	1 cut(s)	1696
BaeI	ACNNNNGTAYC	2 cut(s)	135, 168
BamHI	GGATCC	2 cut(s)	283, 1151
BanI	GGYRCC	2 cut(s)	117, 721
BanII	GRGCYC	1 cut(s)	1126
BarI	GAAGNNNNNNTAC	2 cut(s)	398, 430
BauI	CACGAG	1 cut(s)	1239
Bbv12I	GWGCWC	1 cut(s)	1126
BbvI	GCAGC	1 cut(s)	1412
BccI	CCATC	2 cut(s)	181, 543
BceAI	ACGGC	3 cut(s)	469, 824, 1753
BcgI	CGANNNNNNTGC	2 cut(s)	1530, 1564
BciT130I	CCWGG	2 cut(s)	288, 591
BciVI	GTATCC	2 cut(s)	295, 1852
BcoDI	GTCTC	1 cut(s)	1817
BfaI	CTAG	2 cut(s)	1229, 1371
BfmI	CTRYAG	3 cut(s)	682, 1398, 1863
BfuAI	ACCTGC	2 cut(s)	873, 1857
BfuI	GTATCC	2 cut(s)	295, 1852
BisI	GCNGC	1 cut(s)	1401
BlsI	GCNGC	1 cut(s)	1402
Bme1390I	CCNGG	2 cut(s)	288, 591
Bme18I	GGWCC	1 cut(s)	1696
BmgT120I	GGNCC	1 cut(s)	1696
BmiI	GGNNCC	4 cut(s)	119, 285, 723, 1153
BmrFI	CCNGG	2 cut(s)	288, 591
BmsI	GCATC	8 cut(s)	49, 783, 847, 1168, 1609, 1644, 1716, 1779
BpmI	CTGGAG	2 cut(s)	817, 1413
Bpu14I	TTCGAA	1 cut(s)	815
Bsa29I	ATCGAT	1 cut(s)	252
BsaJI	CCNNGG	7 cut(s)	63, 485, 650, 1107, 1261, 1713, 1878
BsaWI	WCCGGW	2 cut(s)	273, 740
Bsc4I	CCNNNNNNNGG	2 cut(s)	280, 335
Bse118I	RCCGGY	1 cut(s)	426
Bse1I	ACTGG	4 cut(s)	694, 725, 1506, 1593
BseAI	TCCGGA	1 cut(s)	273
BseBI	CCWGG	2 cut(s)	288, 591
BseCI	ATCGAT	1 cut(s)	252
BseDI	CCNNGG	7 cut(s)	63, 485, 650, 1107, 1261, 1713, 1878
BseGI	GGATG	3 cut(s)	862, 1271, 1624
BseLI	CCNNNNNNNGG	2 cut(s)	280, 335
BseMII	CTCAG	1 cut(s)	1788
BseNI	ACTGG	4 cut(s)	694, 725, 1506, 1593
BseRI	GAGGAG	1 cut(s)	1531
BseXI	GCAGC	1 cut(s)	1412
BseYI	CCCAGC	1 cut(s)	517
Bsh1236I	CGCG	1 cut(s)	621
Bsh1285I	CGRYCG	1 cut(s)	431
BshFI	GGCC	3 cut(s)	319, 839, 969
BshNI	GGYRCC	2 cut(s)	117, 721
BshVI	ATCGAT	1 cut(s)	252
BsiEI	CGRYCG	1 cut(s)	431
BsiHKAI	GWGCWC	1 cut(s)	1126
BsiSI	CCGG	3 cut(s)	274, 427, 741
BslFI	GGGAC	4 cut(s)	427, 517, 668, 1764
BslI	CCNNNNNNNGG	2 cut(s)	280, 335
BsmAI	GTCTC	1 cut(s)	1817
BsmFI	GGGAC	4 cut(s)	427, 517, 668, 1764
BsmI	GAATGC	2 cut(s)	1218, 1537
BsnI	GGCC	3 cut(s)	319, 839, 969
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	1 cut(s)	1126
Bsp13I	TCCGGA	1 cut(s)	273
Bsp143I	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
Bsp19I	CCATGG	2 cut(s)	650, 1878
BspACI	CCGC	5 cut(s)	83, 351, 363, 619, 1699
BspANI	GGCC	3 cut(s)	319, 839, 969
BspCNI	CTCAG	1 cut(s)	1789
BspDI	ATCGAT	1 cut(s)	252
BspEI	TCCGGA	1 cut(s)	273
BspFNI	CGCG	1 cut(s)	621
BspHI	TCATGA	1 cut(s)	52
BspLI	GGNNCC	4 cut(s)	119, 285, 723, 1153
BspMAI	CTGCAG	1 cut(s)	1402
BspMI	ACCTGC	2 cut(s)	873, 1857
BspPI	GGATC	6 cut(s)	108, 278, 291, 1146, 1159, 1583
BspT104I	TTCGAA	1 cut(s)	815
BspT107I	GGYRCC	2 cut(s)	117, 721
BsrFI	RCCGGY	1 cut(s)	426
BsrI	ACTGG	4 cut(s)	694, 725, 1506, 1593
BssAI	RCCGGY	1 cut(s)	426
BssECI	CCNNGG	7 cut(s)	63, 485, 650, 1107, 1261, 1713, 1878
BssMI	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
BssSI	CACGAG	1 cut(s)	1239
BssT1I	CCWWGG	5 cut(s)	63, 650, 1261, 1713, 1878
Bst2BI	CACGAG	1 cut(s)	1239
Bst2UI	CCWGG	2 cut(s)	288, 591
Bst4CI	ACNGT	5 cut(s)	80, 151, 810, 831, 910
Bst6I	CTCTTC	1 cut(s)	1830
BstBI	TTCGAA	1 cut(s)	815
BstC8I	GCNNGC	5 cut(s)	87, 180, 355, 971, 1356
BstDEI	CTNAG	2 cut(s)	296, 1797
BstDSI	CCRYGG	3 cut(s)	485, 650, 1878
BstENI	CCTNNNNNAGG	1 cut(s)	333
BstF5I	GGATG	3 cut(s)	862, 1271, 1624
BstFNI	CGCG	1 cut(s)	621
BstKTI	GATC	8 cut(s)	103, 286, 661, 738, 1154, 1378, 1578, 1744
BstMAI	GTCTC	1 cut(s)	1817
BstMBI	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
BstMCI	CGRYCG	1 cut(s)	431
BstMWI	GCNNNNNNNGC	4 cut(s)	82, 474, 728, 1765
BstNI	CCWGG	2 cut(s)	288, 591
BstNSI	RCATGY	3 cut(s)	182, 1144, 1541
BstSCI	CCNGG	2 cut(s)	286, 589
BstSFI	CTRYAG	3 cut(s)	682, 1398, 1863
BstUI	CGCG	1 cut(s)	621
BstV1I	GCAGC	1 cut(s)	1412
BstX2I	RGATCY	4 cut(s)	100, 283, 1151, 1575
BstYI	RGATCY	4 cut(s)	100, 283, 1151, 1575
Bsu15I	ATCGAT	1 cut(s)	252
BsuI	GTATCC	2 cut(s)	295, 1852
BsuRI	GGCC	3 cut(s)	319, 839, 969
BsuTUI	ATCGAT	1 cut(s)	252
BtgI	CCRYGG	3 cut(s)	485, 650, 1878
BtgZI	GCGATG	3 cut(s)	159, 465, 1833
BtsCI	GGATG	3 cut(s)	862, 1271, 1624
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	2 cut(s)	76, 1395
BveI	ACCTGC	2 cut(s)	873, 1857
Cac8I	GCNNGC	5 cut(s)	87, 180, 355, 971, 1356
CciI	TCATGA	1 cut(s)	52
Cfr10I	RCCGGY	1 cut(s)	426
Cfr13I	GGNCC	1 cut(s)	1696
ClaI	ATCGAT	1 cut(s)	252
CsiI	ACCWGGT	1 cut(s)	589
Csp6I	GTAC	5 cut(s)	118, 144, 231, 758, 862
CviQI	GTAC	5 cut(s)	118, 144, 231, 758, 862
DdeI	CTNAG	2 cut(s)	296, 1797
DpnI	GATC	8 cut(s)	102, 285, 660, 737, 1153, 1377, 1577, 1743
DpnII	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
DraIII	CACNNNGTG	1 cut(s)	1859
Eam1104I	CTCTTC	1 cut(s)	1830
EarI	CTCTTC	1 cut(s)	1830
EciI	GGCGGA	1 cut(s)	72
Ecl136II	GAGCTC	1 cut(s)	1124
Eco130I	CCWWGG	5 cut(s)	63, 650, 1261, 1713, 1878
Eco24I	GRGCYC	1 cut(s)	1126
Eco32I	GATATC	1 cut(s)	1294
Eco47I	GGWCC	1 cut(s)	1696
Eco53kI	GAGCTC	1 cut(s)	1124
EcoICRI	GAGCTC	1 cut(s)	1124
EcoNI	CCTNNNNNAGG	1 cut(s)	333
EcoRI	GAATTC	2 cut(s)	848, 1065
EcoRII	CCWGG	2 cut(s)	286, 589
EcoRV	GATATC	1 cut(s)	1294
EcoT14I	CCWWGG	5 cut(s)	63, 650, 1261, 1713, 1878
EcoT22I	ATGCAT	1 cut(s)	1218
EcoT38I	GRGCYC	1 cut(s)	1126
ErhI	CCWWGG	5 cut(s)	63, 650, 1261, 1713, 1878
FalI	AAGNNNNNCTT	2 cut(s)	289, 321
FaqI	GGGAC	4 cut(s)	427, 517, 668, 1764
FblI	GTMKAC	1 cut(s)	292
Fnu4HI	GCNGC	1 cut(s)	1401
FokI	GGATG	3 cut(s)	869, 1278, 1631
FriOI	GRGCYC	1 cut(s)	1126
Fsp4HI	GCNGC	1 cut(s)	1401
FspBI	CTAG	2 cut(s)	1229, 1371
GluI	GCNGC	1 cut(s)	1401
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	2 cut(s)	817, 1413
HaeIII	GGCC	3 cut(s)	319, 839, 969
HapII	CCGG	3 cut(s)	274, 427, 741
HincII	GTYRAC	1 cut(s)	1586
HindII	GTYRAC	1 cut(s)	1586
HinfI	GANTC	8 cut(s)	202, 249, 322, 440, 748, 868, 1098, 1868
HpaII	CCGG	3 cut(s)	274, 427, 741
HphI	GGTGA	4 cut(s)	317, 730, 922, 1748
Hpy166II	GTNNAC	3 cut(s)	293, 1586, 1696
Hpy188I	TCNGA	4 cut(s)	18, 898, 1108, 1345
Hpy188III	TCNNGA	4 cut(s)	53, 274, 796, 1430
Hpy8I	GTNNAC	3 cut(s)	293, 1586, 1696
Hpy99I	CGWCG	1 cut(s)	845
HpyAV	CCTTC	4 cut(s)	424, 1578, 1713, 1727
HpyCH4III	ACNGT	5 cut(s)	80, 151, 810, 831, 910
HpyCH4IV	ACGT	1 cut(s)	626
HpyF10VI	GCNNNNNNNGC	4 cut(s)	82, 474, 728, 1765
HpyF3I	CTNAG	2 cut(s)	296, 1797
HpySE526I	ACGT	1 cut(s)	626
Kpn2I	TCCGGA	1 cut(s)	273
KpnI	GGTACC	1 cut(s)	121
Kzo9I	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
LmnI	GCTCC	2 cut(s)	798, 1432
Lsp1109I	GCAGC	1 cut(s)	1412
LweI	GCATC	8 cut(s)	49, 783, 847, 1168, 1609, 1644, 1716, 1779
MabI	ACCWGGT	1 cut(s)	589
MaeI	CTAG	2 cut(s)	1229, 1371
MaeII	ACGT	1 cut(s)	626
MaeIII	GTNAC	4 cut(s)	910, 1379, 1393, 1497
MalI	GATC	8 cut(s)	102, 285, 660, 737, 1153, 1377, 1577, 1743
MboI	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
MboII	GAAGA	6 cut(s)	530, 857, 1074, 1663, 1751, 1847
MfeI	CAATTG	1 cut(s)	1245
MflI	RGATCY	4 cut(s)	100, 283, 1151, 1575
MhlI	GDGCHC	1 cut(s)	1126
MlyI	GAGTC	2 cut(s)	449, 757
MmeI	TCCRAC	1 cut(s)	1869
Mph1103I	ATGCAT	1 cut(s)	1218
MroI	TCCGGA	1 cut(s)	273
MroXI	GAANNNNTTC	1 cut(s)	221
MseI	TTAA	6 cut(s)	138, 153, 462, 513, 903, 1329
MslI	CAYNNNNRTG	5 cut(s)	57, 484, 743, 1077, 1691
MspI	CCGG	3 cut(s)	274, 427, 741
MspR9I	CCNGG	2 cut(s)	288, 591
MunI	CAATTG	1 cut(s)	1245
Mva1269I	GAATGC	2 cut(s)	1218, 1537
MvaI	CCWGG	2 cut(s)	288, 591
MvnI	CGCG	1 cut(s)	621
MwoI	GCNNNNNNNGC	4 cut(s)	82, 474, 728, 1765
NcoI	CCATGG	2 cut(s)	650, 1878
NdeII	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
NlaIV	GGNNCC	4 cut(s)	119, 285, 723, 1153
NmuCI	GTSAC	2 cut(s)	910, 1393
NsiI	ATGCAT	1 cut(s)	1218
NspI	RCATGY	3 cut(s)	182, 1144, 1541
NspV	TTCGAA	1 cut(s)	815
OliI	CACNNNNGTG	1 cut(s)	743
PaeI	GCATGC	1 cut(s)	182
PagI	TCATGA	1 cut(s)	52
PctI	GAATGC	2 cut(s)	1218, 1537
PdmI	GAANNNNTTC	1 cut(s)	221
PfeI	GAWTC	6 cut(s)	202, 249, 322, 868, 1098, 1868
PkrI	GCNGC	1 cut(s)	1402
PleI	GAGTC	2 cut(s)	448, 756
PpsI	GAGTC	2 cut(s)	448, 756
PshBI	ATTAAT	2 cut(s)	138, 462
PsiI	TTATAA	1 cut(s)	963
Psp124BI	GAGCTC	1 cut(s)	1126
Psp6I	CCWGG	2 cut(s)	286, 589
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	2 cut(s)	286, 589
PspN4I	GGNNCC	4 cut(s)	119, 285, 723, 1153
PspPI	GGNCC	1 cut(s)	1696
PstI	CTGCAG	1 cut(s)	1402
PsuI	RGATCY	4 cut(s)	100, 283, 1151, 1575
RsaI	GTAC	5 cut(s)	119, 145, 232, 759, 863
RsaNI	GTAC	5 cut(s)	118, 144, 231, 758, 862
RseI	CAYNNNNRTG	5 cut(s)	57, 484, 743, 1077, 1691
SacI	GAGCTC	1 cut(s)	1126
SaqAI	TTAA	6 cut(s)	138, 153, 462, 513, 903, 1329
SatI	GCNGC	1 cut(s)	1401
Sau3AI	GATC	8 cut(s)	100, 283, 658, 735, 1151, 1375, 1575, 1741
Sau96I	GGNCC	1 cut(s)	1696
SchI	GAGTC	2 cut(s)	449, 757
ScrFI	CCNGG	2 cut(s)	288, 591
SduI	GDGCHC	1 cut(s)	1126
SexAI	ACCWGGT	1 cut(s)	589
SfaNI	GCATC	8 cut(s)	49, 783, 847, 1168, 1609, 1644, 1716, 1779
SfcI	CTRYAG	3 cut(s)	682, 1398, 1863
SfuI	TTCGAA	1 cut(s)	815
SinI	GGWCC	1 cut(s)	1696
SmiMI	CAYNNNNRTG	5 cut(s)	57, 484, 743, 1077, 1691
SphI	GCATGC	1 cut(s)	182
SsiI	CCGC	5 cut(s)	83, 351, 363, 619, 1699
SspMI	CTAG	2 cut(s)	1229, 1371
SstI	GAGCTC	1 cut(s)	1126
StyD4I	CCNGG	2 cut(s)	286, 589
StyI	CCWWGG	5 cut(s)	63, 650, 1261, 1713, 1878
TaaI	ACNGT	5 cut(s)	80, 151, 810, 831, 910
TaiI	ACGT	1 cut(s)	629
TaqI	TCGA	6 cut(s)	252, 431, 815, 843, 1158, 1550
TfiI	GAWTC	6 cut(s)	202, 249, 322, 868, 1098, 1868
Tru1I	TTAA	6 cut(s)	138, 153, 462, 513, 903, 1329
Tru9I	TTAA	6 cut(s)	138, 153, 462, 513, 903, 1329
TscAI	CASTG	2 cut(s)	83, 1402
TseFI	GTSAC	2 cut(s)	910, 1393
TseI	GCWGC	1 cut(s)	1400
Tsp45I	GTSAC	2 cut(s)	910, 1393
TspDTI	ATGAA	8 cut(s)	180, 273, 594, 879, 1027, 1058, 1059, 1335
TspRI	CASTG	2 cut(s)	83, 1402
VpaK11BI	GGWCC	1 cut(s)	1696
VspI	ATTAAT	2 cut(s)	138, 462
XagI	CCTNNNNNAGG	1 cut(s)	333
XapI	RAATTY	5 cut(s)	848, 1065, 1278, 1338, 1525
XceI	RCATGY	3 cut(s)	182, 1144, 1541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	977
XmiI	GTMKAC	1 cut(s)	292
XmnI	GAANNNNTTC	1 cut(s)	221
XspI	CTAG	2 cut(s)	1229, 1371
Zsp2I	ATGCAT	1 cut(s)	1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.