Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002901

Physical Location & Seq

Genomic Coordinates Forward (+)

4652026 .. 4655945

Gene Structure 3920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0062500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGTCAACTATCACAGGTAGTGGTGTTAGGAGCTTCTCTTCAGGAAATACTACCAGTGCTGAAGAAGTGCTTCAACAACAGCAACAACAAGAGCTACTAAATCACTTCCATGGCTCCAATTCTCTTCAGGAAATTACAATCAATGGTAATTCTGCAACTCAACAACAGCAACCTCCACCAGCCAAGAAGAAAAGAAACCTACCAGGAACTCCAGATCCAAGTGCTGAAGTGATAGCCTTGTCACCAAAGACCCTGATGGCAACAAACCGATTCGTGTGCGAAATTTGCAAGAAAGGGTTCCAAAGGGACCAAAACCTCCAATTGCACCGAAGAGGCCACAACTTGCCATGGAAGCTTAAGCAAAGATCAAGCACCGAAATCCGGAAGCGGGTCTACATCTGCCCCGAACCCTCATGCGTCCACCATGAACCCTCCCGGGCACTGGGAGATCTCACGGGGATCAAGAAGCACTTTTGCCGGAAGCATGGTGAGAAAAAGTGGAAATGTGACAAGTGCTCGAAGAAGTATGCAGTGCAATCGGACTGGAAAGCTCATTCTAAGACCTGTGGTACTAGAGAATACAAATGTGACTGTGGAACCGTCTTCTCCAGAAGAGATAGCTTTATCACCCACAGAGCTTTCTGTGATGCCATAGCTGAAGAAAACAAGACACCAGTTCAAGGACAAGGAGTACTAATGTCCAACAACATGGGACAACAGAACTTACAACAAGGCGGCCAACTAGTTTCCTGCGGCGAGCTCATGATCCCGGCCTCAATACCGATGAGTAACACCGAAACAGCTACCACCATCCCATCAACAAGAAGTAGCAATACTTCTGATCACTTTGATCATTTCGACACCAAAAATCCTAATTTAACACTACTGCCCCAAGGATTACCAGCAAACATGTTGCCATCATCCAGATGCGGCCTGAACAACAATTCATTGTCATCACCAACAAGTAGTGCACTGTTTCATAATCACCACGGGCACCAAGTACTCCCCAGCTCAATCTCCGGCCACTTGTCCGCCACCGAGTTGCTGCAGAAAGCAGCTCAAATGGGTGCAACAATGAGCAGCAATAATTCTAGTGGTATGAGCATGGCACCCTCAACATATGGTGACTTTCCTAGTTACGTGAATAACCAGTTCATGCAGCACAAAGATGGTAACAGTATTCCGGTACAAGAGACCTCGTCGCAGTTCTTTGGTGCTAGTAATGGGAATATGGGAATGTTCAGTGGGCTATTATTTGATCAGAGCAATGGGGTGTTGATGAAGAACATGGAGCAAAGCGTTAATGGCAGGAATAATAATAATAATAACAATAATACTAGTAATGGTTTCAGCTGCTTGCATGGTAAAAATGTGAGTAGCGGAGGAGATACGATGACCGTGGACTTTCTGGGGATTGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGTAATAGATCAGAAACTTTTCATGATCATCAACAAAGACAAGCACTACATGATGAGCATCAGCGACAAAATAAGCAGGAAGATGATGATCAATTAATGGGGTTTGGTTGGAGCTGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023056 GO:0030163 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0097305 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

523

Amino Acids

57.42

Weight (kDa)

8.93

Isoelectric Point (pI)

54.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	128 - 162	4.2e-22	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	166 - 190	2.7e-14	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	193 - 224	4e-22	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01520 AT5G01520
fragaria_vesca	FvH4_3g04920 FvH4_6g11510 FvH4_6g11510
malus_domestica	MD04G1151400.v1.1 MD05G1314700.v1.1 MD10G1296100.v1.1 MD12G1165500.v1.1
prunus_persica	Prupe.4G044500_v2.0.a1 Prupe.6G276500_v2.0.a1 Prupe.6G276500_v2.0.a1 Prupe.6G276500_v2.0.a1
pyrus_communis	pycom04g13730 pycom05g29250 pycom10g24860 pycom12g15810
rosa_chinensis	RchiOBHm_Chr3g0463221 RchiOBHm_Chr5g0008081
rosa_laevigata	RLG00000024801 RLG00000031534
rosa_multiflora	Rmu_sc0001626.1_g000003 Rmu_sc0004643.1_g000001 Rmu_sc0017465.1_g000004
rosa_roxburghii	Rroxscaffold_1G00068400 Rroxscaffold_6G00416790
rosa_rugosa	Rorug03G0062500 Rorug03G0062500 Rorug04G0433300
rosa_samantha	Rh3AG120700 Rh3BG125100 Rh3CG127200 Rh3DG126300 Rh5BG058100 Rh5CG068200 Rh5DG057300
rosa_wichuraiana	Rw3G010250 Rw5G005930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	993, 1108
AccI	GTMKAC	1 cut(s)	393
AccIII	TCCGGA	1 cut(s)	381
AciI	CCGC	6 cut(s)	388, 735, 753, 930, 1032, 1380
AclWI	GGATC	3 cut(s)	209, 467, 760
AcoI	YGGCCR	2 cut(s)	736, 1021
AcsI	RAATTY	1 cut(s)	282
AcuI	CTGAAG	5 cut(s)	24, 81, 110, 246, 678
AfaI	GTAC	4 cut(s)	571, 693, 1002, 1188
AfiI	CCNNNNNNNGG	4 cut(s)	381, 388, 442, 680
AflII	CTTAAG	1 cut(s)	356
AflIII	ACRYGT	1 cut(s)	909
AgsI	TTSAA	2 cut(s)	74, 680
AhlI	ACTAGT	2 cut(s)	742, 1337
AjnI	CCWGG	1 cut(s)	202
AloI	GAACNNNNNNTCC	2 cut(s)	199, 231
Alw21I	GWGCWC	3 cut(s)	518, 762, 973
Alw26I	GTCTC	1 cut(s)	1187
Alw44I	GTGCAC	1 cut(s)	969
AlwI	GGATC	3 cut(s)	209, 467, 760
Ama87I	CYCGRG	1 cut(s)	435
Aor13HI	TCCGGA	1 cut(s)	381
AoxI	GGCC	5 cut(s)	334, 736, 771, 931, 1021
ApaLI	GTGCAC	1 cut(s)	969
ApeKI	GCWGC	5 cut(s)	1045, 1055, 1080, 1159, 1353
ApoI	RAATTY	1 cut(s)	282
AseI	ATTAAT	1 cut(s)	1544
Asp700I	GAANNNNTTC	3 cut(s)	69, 296, 1467
AspS9I	GGNCC	1 cut(s)	307
AsuC2I	CCSGG	3 cut(s)	436, 437, 770
AsuHPI	GGTGA	6 cut(s)	234, 500, 619, 948, 977, 1136
AvaI	CYCGRG	1 cut(s)	435
AvaII	GGWCC	1 cut(s)	307
BaeGI	GKGCMC	3 cut(s)	442, 973, 996
BanI	GGYRCC	2 cut(s)	993, 1108
BanII	GRGCYC	1 cut(s)	762
BarI	GAAGNNNNNNTAC	6 cut(s)	377, 409, 817, 820, 849, 852
BbsI	GAAGAC	1 cut(s)	595
Bbv12I	GWGCWC	3 cut(s)	518, 762, 973
BbvI	GCAGC	5 cut(s)	1032, 1067, 1092, 1171, 1340
BccI	CCATC	5 cut(s)	250, 818, 823, 925, 1163
BcgI	CGANNNNNNTGC	4 cut(s)	258, 292, 519, 553
BciT130I	CCWGG	1 cut(s)	204
BclI	TGATCA	5 cut(s)	841, 850, 1258, 1474, 1537
BcnI	CCSGG	3 cut(s)	436, 437, 770
BcoDI	GTCTC	1 cut(s)	1187
BcuI	ACTAGT	2 cut(s)	742, 1337
BfaI	CTAG	6 cut(s)	573, 743, 1092, 1134, 1218, 1338
BfmI	CTRYAG	1 cut(s)	1046
BfrI	CTTAAG	1 cut(s)	356
BglII	AGATCT	1 cut(s)	448
BisI	GCNGC	8 cut(s)	736, 754, 931, 1046, 1056, 1081, 1160, 1354
BlsI	GCNGC	8 cut(s)	737, 755, 932, 1047, 1057, 1082, 1161, 1355
BmcAI	AGTACT	2 cut(s)	693, 1002
Bme1390I	CCNGG	4 cut(s)	204, 436, 437, 770
Bme18I	GGWCC	1 cut(s)	307
BmeT110I	CYCGRG	1 cut(s)	435
BmgT120I	GGNCC	1 cut(s)	307
BmiI	GGNNCC	6 cut(s)	115, 299, 308, 598, 995, 1110
BmrFI	CCNGG	4 cut(s)	204, 436, 437, 770
BmrI	ACTGGG	1 cut(s)	452
BmsI	GCATC	3 cut(s)	637, 917, 1516
BmuI	ACTGGG	1 cut(s)	452
BpiI	GAAGAC	1 cut(s)	595
BpmI	CTGGAG	2 cut(s)	195, 592
BpuMI	CCSGG	3 cut(s)	436, 437, 770
BsaAI	YACGTR	1 cut(s)	1141
BsaBI	GATNNNNATC	2 cut(s)	1506, 1536
BsaI	GGTCTC	1 cut(s)	1187
BsaJI	CCNNGG	6 cut(s)	109, 347, 435, 892, 988, 1398
BsaWI	WCCGGW	2 cut(s)	381, 1183
BsaXI	ACNNNNNCTCC	1 cut(s)	1552
Bsc4I	CCNNNNNNNGG	4 cut(s)	381, 388, 442, 680
Bse1I	ACTGG	5 cut(s)	54, 447, 548, 674, 1150
Bse3DI	GCAATG	1 cut(s)	1273
Bse8I	GATNNNNATC	2 cut(s)	1506, 1536
BseAI	TCCGGA	1 cut(s)	381
BseBI	CCWGG	1 cut(s)	204
BseDI	CCNNGG	6 cut(s)	109, 347, 435, 892, 988, 1398
BseGI	GGATG	2 cut(s)	810, 920
BseJI	GATNNNNATC	2 cut(s)	1506, 1536
BseLI	CCNNNNNNNGG	4 cut(s)	381, 388, 442, 680
BseMI	GCAATG	1 cut(s)	1273
BseNI	ACTGG	5 cut(s)	54, 447, 548, 674, 1150
BseRI	GAGGAG	6 cut(s)	1398, 1449, 1452, 1455, 1458, 1461
BseSI	GKGCMC	3 cut(s)	442, 973, 996
BseXI	GCAGC	5 cut(s)	1032, 1067, 1092, 1171, 1340
BseYI	CCCAGC	1 cut(s)	1007
BshFI	GGCC	5 cut(s)	336, 738, 773, 933, 1023
BshNI	GGYRCC	2 cut(s)	993, 1108
BsiHKAI	GWGCWC	3 cut(s)	518, 762, 973
BsiHKCI	CYCGRG	1 cut(s)	435
BsiSI	CCGG	6 cut(s)	382, 436, 478, 770, 1020, 1184
BslFI	GGGAC	2 cut(s)	320, 726
BslI	CCNNNNNNNGG	4 cut(s)	381, 388, 442, 680
BsmAI	GTCTC	1 cut(s)	1187
BsmFI	GGGAC	2 cut(s)	320, 726
BsnI	GGCC	5 cut(s)	336, 738, 773, 933, 1023
Bso31I	GGTCTC	1 cut(s)	1187
BsoBI	CYCGRG	1 cut(s)	435
Bsp1286I	GDGCHC	5 cut(s)	442, 518, 762, 973, 996
Bsp13I	TCCGGA	1 cut(s)	381
Bsp19I	CCATGG	2 cut(s)	109, 347
BspACI	CCGC	6 cut(s)	388, 735, 753, 930, 1032, 1380
BspANI	GGCC	5 cut(s)	336, 738, 773, 933, 1023
BspEI	TCCGGA	1 cut(s)	381
BspHI	TCATGA	2 cut(s)	762, 1471
BspLI	GGNNCC	6 cut(s)	115, 299, 308, 598, 995, 1110
BspMAI	CTGCAG	1 cut(s)	1050
BspPI	GGATC	3 cut(s)	209, 467, 760
BspT107I	GGYRCC	2 cut(s)	993, 1108
BspTI	CTTAAG	1 cut(s)	356
BspTNI	GGTCTC	1 cut(s)	1187
BsrDI	GCAATG	1 cut(s)	1273
BsrI	ACTGG	5 cut(s)	54, 447, 548, 674, 1150
BssECI	CCNNGG	6 cut(s)	109, 347, 435, 892, 988, 1398
BssT1I	CCWWGG	3 cut(s)	109, 347, 892
Bst2UI	CCWGG	1 cut(s)	204
Bst4CI	ACNGT	5 cut(s)	593, 601, 975, 1178, 1399
Bst6I	CTCTTC	7 cut(s)	43, 129, 325, 607, 1414, 1420, 1426
BstAFI	CTTAAG	1 cut(s)	356
BstBAI	YACGTR	1 cut(s)	1141
BstC8I	GCNNGC	2 cut(s)	758, 1358
BstDEI	CTNAG	1 cut(s)	558
BstDSI	CCRYGG	4 cut(s)	109, 347, 988, 1398
BstF5I	GGATG	2 cut(s)	810, 920
BstMAI	GTCTC	1 cut(s)	1187
BstMWI	GCNNNNNNNGC	3 cut(s)	285, 352, 1305
BstNI	CCWGG	1 cut(s)	204
BstNSI	RCATGY	1 cut(s)	913
BstSCI	CCNGG	4 cut(s)	202, 434, 435, 768
BstSFI	CTRYAG	1 cut(s)	1046
BstSLI	GKGCMC	3 cut(s)	442, 973, 996
BstV1I	GCAGC	5 cut(s)	1032, 1067, 1092, 1171, 1340
BstV2I	GAAGAC	1 cut(s)	595
BstX2I	RGATCY	2 cut(s)	214, 448
BstXI	CCANNNNNNTGG	1 cut(s)	709
BstYI	RGATCY	2 cut(s)	214, 448
BsuRI	GGCC	5 cut(s)	336, 738, 773, 933, 1023
BtgI	CCRYGG	4 cut(s)	109, 347, 988, 1398
BtsCI	GGATG	2 cut(s)	810, 920
BtsI	GCAGTG	1 cut(s)	537
BtsIMutI	CAGTG	5 cut(s)	61, 440, 537, 971, 1249
Cac8I	GCNNGC	2 cut(s)	758, 1358
CciI	TCATGA	2 cut(s)	762, 1471
Cfr13I	GGNCC	1 cut(s)	307
Cfr9I	CCCGGG	1 cut(s)	435
CseI	GACGC	1 cut(s)	406
Csp6I	GTAC	4 cut(s)	570, 692, 1001, 1187
CviQI	GTAC	4 cut(s)	570, 692, 1001, 1187
DdeI	CTNAG	1 cut(s)	558
EaeI	YGGCCR	2 cut(s)	736, 1021
Eam1104I	CTCTTC	7 cut(s)	43, 129, 325, 607, 1414, 1420, 1426
EarI	CTCTTC	7 cut(s)	43, 129, 325, 607, 1414, 1420, 1426
EciI	GGCGGA	1 cut(s)	1021
Ecl136II	GAGCTC	1 cut(s)	760
Eco130I	CCWWGG	3 cut(s)	109, 347, 892
Eco24I	GRGCYC	1 cut(s)	762
Eco31I	GGTCTC	1 cut(s)	1187
Eco47I	GGWCC	1 cut(s)	307
Eco53kI	GAGCTC	1 cut(s)	760
Eco57I	CTGAAG	5 cut(s)	24, 81, 110, 246, 678
Eco88I	CYCGRG	1 cut(s)	435
EcoICRI	GAGCTC	1 cut(s)	760
EcoRII	CCWGG	1 cut(s)	202
EcoT14I	CCWWGG	3 cut(s)	109, 347, 892
EcoT38I	GRGCYC	1 cut(s)	762
ErhI	CCWWGG	3 cut(s)	109, 347, 892
FalI	AAGNNNNNCTT	4 cut(s)	54, 86, 455, 487
FaqI	GGGAC	2 cut(s)	320, 726
FauI	CCCGC	1 cut(s)	381
FauNDI	CATATG	1 cut(s)	1120
FbaI	TGATCA	5 cut(s)	841, 850, 1258, 1474, 1537
FblI	GTMKAC	1 cut(s)	393
Fnu4HI	GCNGC	8 cut(s)	736, 754, 931, 1046, 1056, 1081, 1160, 1354
FokI	GGATG	2 cut(s)	797, 907
FriOI	GRGCYC	1 cut(s)	762
Fsp4HI	GCNGC	8 cut(s)	736, 754, 931, 1046, 1056, 1081, 1160, 1354
FspBI	CTAG	6 cut(s)	573, 743, 1092, 1134, 1218, 1338
GluI	GCNGC	8 cut(s)	736, 754, 931, 1046, 1056, 1081, 1160, 1354
GsaI	CCCAGC	1 cut(s)	1011
GsuI	CTGGAG	2 cut(s)	195, 592
HaeIII	GGCC	5 cut(s)	336, 738, 773, 933, 1023
HapII	CCGG	6 cut(s)	382, 436, 478, 770, 1020, 1184
HgaI	GACGC	1 cut(s)	406
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	353
HinfI	GANTC	1 cut(s)	270
HpaII	CCGG	6 cut(s)	382, 436, 478, 770, 1020, 1184
HphI	GGTGA	6 cut(s)	234, 500, 619, 948, 977, 1136
Hpy166II	GTNNAC	5 cut(s)	6, 394, 421, 971, 1402
Hpy188I	TCNGA	4 cut(s)	541, 841, 1263, 1462
Hpy188III	TCNNGA	9 cut(s)	42, 128, 212, 382, 463, 609, 763, 924, 1472
Hpy8I	GTNNAC	5 cut(s)	6, 394, 421, 971, 1402
Hpy99I	CGWCG	1 cut(s)	1204
HpyCH4III	ACNGT	5 cut(s)	593, 601, 975, 1178, 1399
HpyCH4IV	ACGT	1 cut(s)	1140
HpyF10VI	GCNNNNNNNGC	3 cut(s)	285, 352, 1305
HpyF3I	CTNAG	1 cut(s)	558
HpySE526I	ACGT	1 cut(s)	1140
Kpn2I	TCCGGA	1 cut(s)	381
Ksp22I	TGATCA	5 cut(s)	841, 850, 1258, 1474, 1537
LmnI	GCTCC	4 cut(s)	30, 119, 1291, 1560
Lsp1109I	GCAGC	5 cut(s)	1032, 1067, 1092, 1171, 1340
LweI	GCATC	3 cut(s)	637, 917, 1516
MaeI	CTAG	6 cut(s)	573, 743, 1092, 1134, 1218, 1338
MaeII	ACGT	1 cut(s)	1140
MaeIII	GTNAC	7 cut(s)	240, 506, 587, 788, 1124, 1136, 1172
MfeI	CAATTG	1 cut(s)	320
MflI	RGATCY	2 cut(s)	214, 448
MhlI	GDGCHC	5 cut(s)	442, 518, 762, 973, 996
MluCI	AATT	9 cut(s)	118, 132, 148, 282, 320, 874, 943, 1087, 1541
MmeI	TCCRAC	2 cut(s)	726, 1538
MroI	TCCGGA	1 cut(s)	381
MroXI	GAANNNNTTC	3 cut(s)	69, 296, 1467
MseI	TTAA	4 cut(s)	357, 878, 1302, 1544
MslI	CAYNNNNRTG	3 cut(s)	108, 925, 1167
MspA1I	CMGCKG	1 cut(s)	1353
MspCI	CTTAAG	1 cut(s)	356
MspI	CCGG	6 cut(s)	382, 436, 478, 770, 1020, 1184
MspR9I	CCNGG	4 cut(s)	204, 436, 437, 770
MunI	CAATTG	1 cut(s)	320
MvaI	CCWGG	1 cut(s)	204
MwoI	GCNNNNNNNGC	3 cut(s)	285, 352, 1305
NciI	CCSGG	3 cut(s)	436, 437, 770
NcoI	CCATGG	2 cut(s)	109, 347
NdeI	CATATG	1 cut(s)	1120
NlaIV	GGNNCC	6 cut(s)	115, 299, 308, 598, 995, 1110
NmuCI	GTSAC	4 cut(s)	240, 506, 587, 1124
NspI	RCATGY	1 cut(s)	913
PagI	TCATGA	2 cut(s)	762, 1471
PciI	ACATGT	1 cut(s)	909
PdmI	GAANNNNTTC	3 cut(s)	69, 296, 1467
PfeI	GAWTC	1 cut(s)	270
PflFI	GACNNNGTC	1 cut(s)	1198
PkrI	GCNGC	8 cut(s)	737, 755, 932, 1047, 1057, 1082, 1161, 1355
Ppu21I	YACGTR	1 cut(s)	1141
PscI	ACATGT	1 cut(s)	909
PshBI	ATTAAT	1 cut(s)	1544
Psp124BI	GAGCTC	1 cut(s)	762
Psp6I	CCWGG	1 cut(s)	202
PspFI	CCCAGC	1 cut(s)	1007
PspGI	CCWGG	1 cut(s)	202
PspN4I	GGNNCC	6 cut(s)	115, 299, 308, 598, 995, 1110
PspPI	GGNCC	1 cut(s)	307
PstI	CTGCAG	1 cut(s)	1050
PsuI	RGATCY	2 cut(s)	214, 448
PsyI	GACNNNGTC	1 cut(s)	1198
PvuII	CAGCTG	1 cut(s)	1353
RsaI	GTAC	4 cut(s)	571, 693, 1002, 1188
RsaNI	GTAC	4 cut(s)	570, 692, 1001, 1187
RseI	CAYNNNNRTG	3 cut(s)	108, 925, 1167
SacI	GAGCTC	1 cut(s)	762
SaqAI	TTAA	4 cut(s)	357, 878, 1302, 1544
SatI	GCNGC	8 cut(s)	736, 754, 931, 1046, 1056, 1081, 1160, 1354
Sau96I	GGNCC	1 cut(s)	307
ScaI	AGTACT	2 cut(s)	693, 1002
ScrFI	CCNGG	4 cut(s)	204, 436, 437, 770
SduI	GDGCHC	5 cut(s)	442, 518, 762, 973, 996
SfaNI	GCATC	3 cut(s)	637, 917, 1516
SfcI	CTRYAG	1 cut(s)	1046
SinI	GGWCC	1 cut(s)	307
SmaI	CCCGGG	1 cut(s)	437
SmiMI	CAYNNNNRTG	3 cut(s)	108, 925, 1167
SmlI	CTYRAG	1 cut(s)	356
SmoI	CTYRAG	1 cut(s)	356
SpeI	ACTAGT	2 cut(s)	742, 1337
Sse9I	AATT	9 cut(s)	118, 132, 148, 282, 320, 874, 943, 1087, 1541
SsiI	CCGC	6 cut(s)	388, 735, 753, 930, 1032, 1380
SspMI	CTAG	6 cut(s)	573, 743, 1092, 1134, 1218, 1338
SstI	GAGCTC	1 cut(s)	762
StyD4I	CCNGG	4 cut(s)	202, 434, 435, 768
StyI	CCWWGG	3 cut(s)	109, 347, 892
TaaI	ACNGT	5 cut(s)	593, 601, 975, 1178, 1399
TaiI	ACGT	1 cut(s)	1143
TaqI	TCGA	2 cut(s)	518, 858
TasI	AATT	9 cut(s)	118, 132, 148, 282, 320, 874, 943, 1087, 1541
TatI	WGTACW	2 cut(s)	691, 1000
TauI	GCSGC	3 cut(s)	738, 756, 933
TfiI	GAWTC	1 cut(s)	270
Tru1I	TTAA	4 cut(s)	357, 878, 1302, 1544
Tru9I	TTAA	4 cut(s)	357, 878, 1302, 1544
TscAI	CASTG	5 cut(s)	61, 447, 537, 978, 1249
TseFI	GTSAC	4 cut(s)	240, 506, 587, 1124
TseI	GCWGC	5 cut(s)	1045, 1055, 1080, 1159, 1353
Tsp45I	GTSAC	4 cut(s)	240, 506, 587, 1124
TspDTI	ATGAA	6 cut(s)	441, 936, 968, 1144, 1295, 1460
TspMI	CCCGGG	1 cut(s)	435
TspRI	CASTG	5 cut(s)	61, 447, 537, 978, 1249
Tth111I	GACNNNGTC	1 cut(s)	1198
Vha464I	CTTAAG	1 cut(s)	356
VneI	GTGCAC	1 cut(s)	969
VpaK11BI	GGWCC	1 cut(s)	307
VspI	ATTAAT	1 cut(s)	1544
XapI	RAATTY	1 cut(s)	282
XceI	RCATGY	1 cut(s)	913
XmaI	CCCGGG	1 cut(s)	435
XmiI	GTMKAC	1 cut(s)	393
XmnI	GAANNNNTTC	3 cut(s)	69, 296, 1467
XspI	CTAG	6 cut(s)	573, 743, 1092, 1134, 1218, 1338
ZrmI	AGTACT	2 cut(s)	693, 1002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.