Rorug03G0131000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012072
Physical Location & Seq
Reverse (-)
10626083 .. 10628504
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0131000.1

Sequence Viewer

Length: 2376 bp
ATGGAAGTTCCCAAATTTCTCATTCTTTTACTGTTTACAGCAACGGTTGCTTGGACTCAAGTGCGGTCACTAGGGTTGCAAAGCCTAAGGCAAGGGAGCTCCTTGAAAGTCGAGGAAGAGAGTGACTTCTTAGTTTCACCAAATGGAACTTTTTCCAGTGGATTTTACAACGTCAGCACCAATTCCTCCTGCTATTCAGTATGGTACACCAACACTATCAACAAAACAGTTGTCTGGATGGCTAACAGAGATACACCTGTCAGCATTAGACAGTCGAAGTTAGCCCTCCGCAGAAATGGCAACCTGGTCTTGACTGATGGAGTTGGTTCAACTGTATGGTCAACCAACACTTTGTCTAATGCAAGCATGGAGTTTCATCTTCGACTTCTTGAAACAGGAAACTTGGTGCTGATCAACCAAGCAGAGAGGATCATCTGGCAGAGTTTTGATTCTCCCACAGATACACTTTTACCATCTCAGCAATTTGACAAGAGCAAAACCTTGGTGTCCATGAGAAGTCAAGGTACATACTTGTCTGGTTTCTATAACTTCAAATTTGATGGTAATAATGTCTTGTACCTCACCCACGATGGCCCTCTACTTTCAAGTGTTTATTGGCCAAAGATGGATACATCTGTTTTTATTAGTGGCAGATCACCTTACAATAGCTCTAGAGTAGCAGTCTTGGATAAACGAGGGGAATTTGTATCAAGTGACAATTTAAAGTTCAATGCATCTGACTATGGGGTTGGTCCAAAGCGCCGTCTAACCTTGGATTATGATGGCCTCTTAAGATTGTACAATCTAAATGAATCAGCTGGGCTTTGGCAAGTCTCATGGTTGCCTGAAATTGATTTTTGCCGGGTTCATGGCTTGTGTGGTGAGTATGGTATTTGCACTTACAAACCAGAACCAACTTGTACTTGCCCTCATGGTTTTTCCATGACCGATCCTTCAGACTGGTCTAAAGGCTGCTCACCTCCATTCAATCTGACTCATGACTCAAAAAAGTTGGACTTCATGGAGCTTCCTTACACAGATTACTACGGATCTGATTTGGACACATATCATATGGGAATCTCTTTCGAAGAATGCAGGAATACATGCCTGAATGATTCAAGGTGCAAAGGGTTTGGATTTGCACTGGACGGATATGGACAATGTTACCCTAAGAACTTTCTTCTTAATGGATTTCGTGTGCCGAGTACTCCCAGCATCATCCATATTAAGATTTCAAAAGGTTCTCTGAGTCCTGATGAAGTATCCCAGCTACAAACATATGATTTGAACTGTTCAAGGGCAGAAGTTGCTCAAAAATTTAGTGGTCCTCAAGTAAAAAAGAGCAATCAGTACGTGAAGTACTTGACTGGTTTTGTAAGTTCTTTTGCGATAATTGAAGCAATCTGTGTTGGTTTGACATGGTGGTGCGTGTTACGAAAGCATGCTGATGAGGACTATATGAACATTGGTTACATGGAATTAGTCATGGAAATCAAACGCTTCACCTATGCAGAACTAAAAAGAGCAACCAAGGGTTTCACACAGGAGATAGGAAAAGGCGGTTTTGGAGCAGTTTATAAAGGGGTTCTCGGTGATGGAAGAGTTGTTGCTGTGAAGAGATTAGAGGGCATTGTGCAAGGAGATGCAGAGTTTTGGGCAGAGGTTAGTGTGATAGGGAATATCAACCACAGGAACTTGGTTAAGCTTTGGGGTTTCTGTGCTGAGAATGAACATAAGCTGTTGGTGTATGAGTACCAGGAGAATGGATCCTTGGATAAAATATTGTTCTCAGATGTGGAATTAGGATTGGAGCAGCGATACAACATTGCATTAGGTACTGCAAAGGGTTTGTCATATTTGCATGAGGAGTGCTTGGAATGGGTGCTCCACTGTGATGTAAAGCCTCAAAACATTCTCTTGGATGACCATCTTGAACCGAAAGTGGCAGACTTTGGCATGTCAAAGTTGTTCAAAGACATTCCTGATGACATTGAGTTTTCAAGAGCTCGCGGCACCAGAGGTTATATGGCTCCAGAGTGGATGATGAATCTGAAGATTGATGCAAAGGTAGATGTCTACAGCTATGGGATTGTTTTGTTGGAACTATTGACTGGAAAGAGTGTTTCTATTTTGCTTTCACCCGAGGTTAGTCCCGTTTCAAAGCACAAAGAACACAACCAAGTTGTACAATGTGTGACTGAAAAAATCGGCAGAGAAGGGCTTGAGGATGTGATTGATCCTAGACTACACCACGAATTCAACAACAAGAAGCTTGAAAGATTGATGAAAGTTGCCTTACTTTGCGTGCACGAAGACCGCAATGCAAGGCCAGCCATGAGTAAGGTTGTGGAGCTTCTGATTCAAAAGGATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

791

Amino Acids

89.37

Weight (kDa)

6.04

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 166 1.7e-26 D-mannose binding lectin
S_locus_glycop PF00954 254 - 314 9e-10 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 513 - 786 3e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 514 - 783 6.6e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012072)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52550 AT3G15780
fragaria_vesca FvH4_6g29860
malus_domestica MD17G1210100.v1.1
prunus_persica Prupe.3G085400_v2.0.a1
pyrus_communis pycom17g21540
rosa_chinensis RchiOBHm_Chr2g0135741
rosa_laevigata RLG00000019481
rosa_roxburghii Rroxscaffold_2G00108960
rosa_rugosa Rorug02G0326000 Rorug02G0326100 Rorug02G0326200 Rorug03G0131000 Rorug07G0223200
rosa_samantha Rh2AG377700 Rh2BG384000 Rh2CG363300 Rh2DG400500
rosa_wichuraiana Rw2G030770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1578
AccB1I GGYRCC 1 cut(s) 2012
AccI GTMKAC 1 cut(s) 2076
AccII CGCG 1 cut(s) 2010
AciI CCGC 5 cut(s) 64, 289, 1560, 2010, 2317
AclWI GGATC 6 cut(s) 437, 944, 1057, 1761, 1774, 2231
AcoI YGGCCR 1 cut(s) 617
AcsI RAATTY 5 cut(s) 14, 554, 701, 1316, 2255
AcuI CTGAAG 2 cut(s) 939, 2072
AflII CTTAAG 1 cut(s) 790
AjnI CCWGG 2 cut(s) 303, 1755
AjuI GAANNNNNNNTTGG 2 cut(s) 1754, 1786
Alw21I GWGCWC 4 cut(s) 101, 1887, 2008, 2310
Alw26I GTCTC 1 cut(s) 838
Alw44I GTGCAC 1 cut(s) 2306
AlwI GGATC 6 cut(s) 437, 944, 1057, 1761, 1774, 2231
Ama87I CYCGRG 1 cut(s) 2141
AoxI GGCC 4 cut(s) 592, 617, 784, 2327
ApaLI GTGCAC 1 cut(s) 2306
ApeKI GCWGC 2 cut(s) 972, 1813
ApoI RAATTY 5 cut(s) 14, 554, 701, 1316, 2255
ArsI GACNNNNNNTTYG 4 cut(s) 216, 248, 1835, 1867
Asp700I GAANNNNTTC 1 cut(s) 151
AspLEI GCGC 1 cut(s) 762
AspS9I GGNCC 3 cut(s) 593, 752, 1325
AsuC2I CCSGG 1 cut(s) 863
AsuHPI GGTGA 8 cut(s) 129, 574, 648, 893, 969, 1495, 1604, 2130
AsuII TTCGAA 1 cut(s) 1086
AvaI CYCGRG 1 cut(s) 2141
AvaII GGWCC 2 cut(s) 752, 1325
AxyI CCTNAGG 1 cut(s) 86
BaeGI GKGCMC 1 cut(s) 2310
BaeI ACNNNNGTAYC 4 cut(s) 243, 276, 621, 654
BalI TGGCCA 1 cut(s) 619
BamHI GGATCC 1 cut(s) 1766
BanI GGYRCC 1 cut(s) 2012
BanII GRGCYC 2 cut(s) 101, 2008
BarI GAAGNNNNNNTAC 2 cut(s) 508, 540
BbsI GAAGAC 1 cut(s) 2319
Bbv12I GWGCWC 4 cut(s) 101, 1887, 2008, 2310
BbvI GCAGC 2 cut(s) 959, 1825
BccI CCATC 9 cut(s) 232, 311, 481, 554, 584, 619, 776, 1589, 1935
BceAI ACGGC 1 cut(s) 747
BciT130I CCWGG 2 cut(s) 305, 1757
BciVI GTATCC 2 cut(s) 622, 1273
BclI TGATCA 1 cut(s) 411
BcnI CCSGG 1 cut(s) 863
BcoDI GTCTC 1 cut(s) 838
BfaI CTAG 3 cut(s) 71, 672, 2241
BfmI CTRYAG 1 cut(s) 2077
BfoI RGCGCY 1 cut(s) 763
BfrI CTTAAG 1 cut(s) 790
BfuI GTATCC 2 cut(s) 622, 1273
BisI GCNGC 3 cut(s) 973, 1814, 2011
BlsI GCNGC 3 cut(s) 974, 1815, 2012
BmcAI AGTACT 2 cut(s) 1207, 1361
Bme1390I CCNGG 3 cut(s) 305, 863, 1757
Bme18I GGWCC 2 cut(s) 752, 1325
BmeT110I CYCGRG 1 cut(s) 2141
BmgT120I GGNCC 3 cut(s) 593, 752, 1325
BmiI GGNNCC 3 cut(s) 1768, 2014, 2031
BmrFI CCNGG 3 cut(s) 305, 863, 1757
BmsI GCATC 4 cut(s) 743, 1224, 1633, 2050
BpiI GAAGAC 1 cut(s) 2319
BpmI CTGGAG 1 cut(s) 2016
Bpu14I TTCGAA 1 cut(s) 1086
BpuEI CTTGAG 3 cut(s) 42, 1314, 2243
BpuMI CCSGG 1 cut(s) 863
BsaAI YACGTR 1 cut(s) 1354
BsaBI GATNNNNATC 1 cut(s) 1926
BsaJI CCNNGG 5 cut(s) 501, 771, 1530, 1770, 2142
Bse1I ACTGG 5 cut(s) 156, 965, 1149, 1372, 2116
Bse21I CCTNAGG 1 cut(s) 86
Bse3DI GCAATG 2 cut(s) 1824, 2326
Bse8I GATNNNNATC 1 cut(s) 1926
BseBI CCWGG 2 cut(s) 305, 1757
BseDI CCNNGG 5 cut(s) 501, 771, 1530, 1770, 2142
BseGI GGATG 6 cut(s) 243, 1218, 1927, 2046, 2233, 2374
BseJI GATNNNNATC 1 cut(s) 1926
BseMI GCAATG 2 cut(s) 1824, 2326
BseMII CTCAG 4 cut(s) 491, 1238, 1713, 1803
BseNI ACTGG 5 cut(s) 156, 965, 1149, 1372, 2116
BseRI GAGGAG 1 cut(s) 1880
BseSI GKGCMC 1 cut(s) 2310
BseXI GCAGC 2 cut(s) 959, 1825
BseYI CCCAGC 3 cut(s) 818, 1211, 1266
Bsh1236I CGCG 1 cut(s) 2010
BshFI GGCC 4 cut(s) 594, 619, 786, 2329
BshNI GGYRCC 1 cut(s) 2012
BsiHKAI GWGCWC 4 cut(s) 101, 1887, 2008, 2310
BsiHKCI CYCGRG 1 cut(s) 2141
BsiSI CCGG 1 cut(s) 862
BslFI GGGAC 1 cut(s) 2136
BsmAI GTCTC 1 cut(s) 838
BsmFI GGGAC 1 cut(s) 2136
BsmI GAATGC 1 cut(s) 1097
BsnI GGCC 4 cut(s) 594, 619, 786, 2329
BsoBI CYCGRG 1 cut(s) 2141
Bsp119I TTCGAA 1 cut(s) 1086
Bsp1286I GDGCHC 4 cut(s) 101, 1887, 2008, 2310
Bsp1407I TGTACA 2 cut(s) 798, 2185
Bsp143I GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
BspACI CCGC 5 cut(s) 64, 289, 1560, 2010, 2317
BspANI GGCC 4 cut(s) 594, 619, 786, 2329
BspCNI CTCAG 4 cut(s) 490, 1239, 1714, 1802
BspFNI CGCG 1 cut(s) 2010
BspHI TCATGA 1 cut(s) 997
BspLI GGNNCC 3 cut(s) 1768, 2014, 2031
BspPI GGATC 6 cut(s) 437, 944, 1057, 1761, 1774, 2231
BspT104I TTCGAA 1 cut(s) 1086
BspT107I GGYRCC 1 cut(s) 2012
BspTI CTTAAG 1 cut(s) 790
BsrDI GCAATG 2 cut(s) 1824, 2326
BsrGI TGTACA 2 cut(s) 798, 2185
BsrI ACTGG 5 cut(s) 156, 965, 1149, 1372, 2116
BssECI CCNNGG 5 cut(s) 501, 771, 1530, 1770, 2142
BssMI GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
BssT1I CCWWGG 4 cut(s) 501, 771, 1530, 1770
Bst2UI CCWGG 2 cut(s) 305, 1757
Bst4CI ACNGT 7 cut(s) 33, 46, 229, 273, 334, 1292, 1892
Bst6I CTCTTC 3 cut(s) 111, 1594, 1610
BstAFI CTTAAG 1 cut(s) 790
BstAPI GCANNNNNTGC 2 cut(s) 47, 1307
BstAUI TGTACA 2 cut(s) 798, 2185
BstBAI YACGTR 1 cut(s) 1354
BstBI TTCGAA 1 cut(s) 1086
BstC8I GCNNGC 5 cut(s) 364, 1443, 2008, 2306, 2331
BstDEI CTNAG 7 cut(s) 86, 130, 477, 1170, 1247, 1722, 1789
BstF5I GGATG 6 cut(s) 243, 1218, 1927, 2046, 2233, 2374
BstFNI CGCG 1 cut(s) 2010
BstH2I RGCGCY 1 cut(s) 763
BstHHI GCGC 1 cut(s) 762
BstKTI GATC 7 cut(s) 414, 432, 656, 952, 1052, 1769, 2239
BstMAI GTCTC 1 cut(s) 838
BstMBI GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
BstMWI GCNNNNNNNGC 4 cut(s) 47, 297, 1307, 2330
BstNI CCWGG 2 cut(s) 305, 1757
BstNSI RCATGY 3 cut(s) 1107, 1445, 1960
BstSCI CCNGG 3 cut(s) 303, 861, 1755
BstSFI CTRYAG 1 cut(s) 2077
BstSLI GKGCMC 1 cut(s) 2310
BstUI CGCG 1 cut(s) 2010
BstV1I GCAGC 2 cut(s) 959, 1825
BstV2I GAAGAC 1 cut(s) 2319
BstX2I RGATCY 2 cut(s) 1049, 1766
BstXI CCANNNNNNTGG 1 cut(s) 1763
BstYI RGATCY 2 cut(s) 1049, 1766
Bsu36I CCTNAGG 1 cut(s) 86
BsuI GTATCC 2 cut(s) 622, 1273
BsuRI GGCC 4 cut(s) 594, 619, 786, 2329
BtsCI GGATG 6 cut(s) 243, 1218, 1927, 2046, 2233, 2374
BtsIMutI CAGTG 3 cut(s) 163, 1142, 1888
Cac8I GCNNGC 5 cut(s) 364, 1443, 2008, 2306, 2331
CciI TCATGA 1 cut(s) 997
CfoI GCGC 1 cut(s) 762
Cfr13I GGNCC 3 cut(s) 593, 752, 1325
CsiI ACCWGGT 1 cut(s) 303
DdeI CTNAG 7 cut(s) 86, 130, 477, 1170, 1247, 1722, 1789
DpnI GATC 7 cut(s) 413, 431, 655, 951, 1051, 1768, 2238
DpnII GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
DraI TTTAAA 1 cut(s) 723
EaeI YGGCCR 1 cut(s) 617
Eam1104I CTCTTC 3 cut(s) 111, 1594, 1610
EarI CTCTTC 3 cut(s) 111, 1594, 1610
Ecl136II GAGCTC 2 cut(s) 99, 2006
Eco130I CCWWGG 4 cut(s) 501, 771, 1530, 1770
Eco24I GRGCYC 2 cut(s) 101, 2008
Eco47I GGWCC 2 cut(s) 752, 1325
Eco53kI GAGCTC 2 cut(s) 99, 2006
Eco57I CTGAAG 2 cut(s) 939, 2072
Eco81I CCTNAGG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 2141
EcoICRI GAGCTC 2 cut(s) 99, 2006
EcoRI GAATTC 1 cut(s) 2255
EcoRII CCWGG 2 cut(s) 303, 1755
EcoT14I CCWWGG 4 cut(s) 501, 771, 1530, 1770
EcoT22I ATGCAT 1 cut(s) 736
EcoT38I GRGCYC 2 cut(s) 101, 2008
ErhI CCWWGG 4 cut(s) 501, 771, 1530, 1770
FalI AAGNNNNNCTT 2 cut(s) 1001, 1033
FaqI GGGAC 1 cut(s) 2136
FauNDI CATATG 2 cut(s) 1071, 1279
FbaI TGATCA 1 cut(s) 411
FblI GTMKAC 1 cut(s) 2076
Fnu4HI GCNGC 3 cut(s) 973, 1814, 2011
FokI GGATG 5 cut(s) 250, 1205, 1934, 2053, 2240
FriOI GRGCYC 2 cut(s) 101, 2008
Fsp4HI GCNGC 3 cut(s) 973, 1814, 2011
FspBI CTAG 3 cut(s) 71, 672, 2241
GlaI GCGC 1 cut(s) 761
GluI GCNGC 3 cut(s) 973, 1814, 2011
GsaI CCCAGC 3 cut(s) 822, 1215, 1270
GsuI CTGGAG 1 cut(s) 2016
HaeII RGCGCY 1 cut(s) 763
HaeIII GGCC 4 cut(s) 594, 619, 786, 2329
HapII CCGG 1 cut(s) 862
HhaI GCGC 1 cut(s) 762
Hin6I GCGC 1 cut(s) 760
HinP1I GCGC 1 cut(s) 760
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HindIII AAGCTT 2 cut(s) 1703, 2270
HpaII CCGG 1 cut(s) 862
HphI GGTGA 8 cut(s) 129, 574, 648, 893, 969, 1495, 1604, 2130
Hpy166II GTNNAC 5 cut(s) 36, 207, 342, 2077, 2308
Hpy188I TCNGA 8 cut(s) 739, 958, 993, 1054, 1248, 1792, 2052, 2358
Hpy8I GTNNAC 5 cut(s) 36, 207, 342, 2077, 2308
HpyAV CCTTC 2 cut(s) 963, 2210
HpyCH4III ACNGT 7 cut(s) 33, 46, 229, 273, 334, 1292, 1892
HpyCH4IV ACGT 2 cut(s) 171, 1353
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 297, 1307, 2330
HpyF3I CTNAG 7 cut(s) 86, 130, 477, 1170, 1247, 1722, 1789
HpySE526I ACGT 2 cut(s) 171, 1353
HspAI GCGC 1 cut(s) 760
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
LmnI GCTCC 8 cut(s) 96, 104, 1024, 1568, 1810, 1890, 2035, 2350
Lsp1109I GCAGC 2 cut(s) 959, 1825
LweI GCATC 4 cut(s) 743, 1224, 1633, 2050
MabI ACCWGGT 1 cut(s) 303
MaeI CTAG 3 cut(s) 71, 672, 2241
MaeII ACGT 2 cut(s) 171, 1353
MaeIII GTNAC 7 cut(s) 66, 122, 713, 1163, 1431, 1469, 2194
MalI GATC 7 cut(s) 413, 431, 655, 951, 1051, 1768, 2238
MboI GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
MboII GAAGA 8 cut(s) 128, 371, 1100, 1172, 1611, 1627, 2065, 2324
MflI RGATCY 2 cut(s) 1049, 1766
MhlI GDGCHC 4 cut(s) 101, 1887, 2008, 2310
MlsI TGGCCA 1 cut(s) 619
MluNI TGGCCA 1 cut(s) 619
MlyI GAGTC 4 cut(s) 49, 988, 995, 1258
MmeI TCCRAC 2 cut(s) 993, 2079
Mox20I TGGCCA 1 cut(s) 619
Mph1103I ATGCAT 1 cut(s) 736
MroXI GAANNNNTTC 1 cut(s) 151
MscI TGGCCA 1 cut(s) 619
MseI TTAA 5 cut(s) 722, 791, 1185, 1227, 1701
MslI CAYNNNNRTG 3 cut(s) 1423, 1446, 1893
Msp20I TGGCCA 1 cut(s) 619
MspA1I CMGCKG 1 cut(s) 818
MspCI CTTAAG 1 cut(s) 790
MspI CCGG 1 cut(s) 862
MspR9I CCNGG 3 cut(s) 305, 863, 1757
Mva1269I GAATGC 1 cut(s) 1097
MvaI CCWGG 2 cut(s) 305, 1757
MvnI CGCG 1 cut(s) 2010
MwoI GCNNNNNNNGC 4 cut(s) 47, 297, 1307, 2330
NciI CCSGG 1 cut(s) 863
NdeI CATATG 2 cut(s) 1071, 1279
NdeII GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
NlaIV GGNNCC 3 cut(s) 1768, 2014, 2031
NmeAIII GCCGAG 1 cut(s) 1227
NmuCI GTSAC 4 cut(s) 66, 122, 713, 2194
NsiI ATGCAT 1 cut(s) 736
NspI RCATGY 3 cut(s) 1107, 1445, 1960
NspV TTCGAA 1 cut(s) 1086
PaeI GCATGC 1 cut(s) 1445
PagI TCATGA 1 cut(s) 997
PctI GAATGC 1 cut(s) 1097
PdmI GAANNNNTTC 1 cut(s) 151
PfeI GAWTC 6 cut(s) 449, 812, 1077, 1115, 2047, 2359
PkrI GCNGC 3 cut(s) 974, 1815, 2012
PleI GAGTC 4 cut(s) 49, 988, 995, 1257
PpsI GAGTC 4 cut(s) 49, 988, 995, 1257
Ppu21I YACGTR 1 cut(s) 1354
PsiI TTATAA 1 cut(s) 1578
Psp124BI GAGCTC 2 cut(s) 101, 2008
Psp6I CCWGG 2 cut(s) 303, 1755
PspFI CCCAGC 3 cut(s) 818, 1211, 1266
PspGI CCWGG 2 cut(s) 303, 1755
PspN4I GGNNCC 3 cut(s) 1768, 2014, 2031
PspPI GGNCC 3 cut(s) 593, 752, 1325
PsrI GAACNNNNNNTAC 2 cut(s) 1454, 1486
PsuI RGATCY 2 cut(s) 1049, 1766
PvuII CAGCTG 1 cut(s) 818
RseI CAYNNNNRTG 3 cut(s) 1423, 1446, 1893
SacI GAGCTC 2 cut(s) 101, 2008
SaqAI TTAA 5 cut(s) 722, 791, 1185, 1227, 1701
SatI GCNGC 3 cut(s) 973, 1814, 2011
Sau3AI GATC 7 cut(s) 411, 429, 653, 949, 1049, 1766, 2236
Sau96I GGNCC 3 cut(s) 593, 752, 1325
ScaI AGTACT 2 cut(s) 1207, 1361
SchI GAGTC 4 cut(s) 49, 988, 995, 1258
ScrFI CCNGG 3 cut(s) 305, 863, 1757
SduI GDGCHC 4 cut(s) 101, 1887, 2008, 2310
SexAI ACCWGGT 1 cut(s) 303
SfaNI GCATC 4 cut(s) 743, 1224, 1633, 2050
SfcI CTRYAG 1 cut(s) 2077
SfuI TTCGAA 1 cut(s) 1086
SinI GGWCC 2 cut(s) 752, 1325
SmiMI CAYNNNNRTG 3 cut(s) 1423, 1446, 1893
SmlI CTYRAG 4 cut(s) 57, 790, 1329, 2222
SmoI CTYRAG 4 cut(s) 57, 790, 1329, 2222
SphI GCATGC 1 cut(s) 1445
SsiI CCGC 5 cut(s) 64, 289, 1560, 2010, 2317
SspI AATATT 1 cut(s) 1782
SspMI CTAG 3 cut(s) 71, 672, 2241
SstI GAGCTC 2 cut(s) 101, 2008
StyD4I CCNGG 3 cut(s) 303, 861, 1755
StyI CCWWGG 4 cut(s) 501, 771, 1530, 1770
TaaI ACNGT 7 cut(s) 33, 46, 229, 273, 334, 1292, 1892
TaiI ACGT 2 cut(s) 174, 1356
TaqI TCGA 4 cut(s) 111, 275, 382, 1086
TaqII GACCGA 1 cut(s) 962
TatI WGTACW 5 cut(s) 798, 920, 1205, 1359, 2185
TauI GCSGC 1 cut(s) 2013
TfiI GAWTC 6 cut(s) 449, 812, 1077, 1115, 2047, 2359
Tru1I TTAA 5 cut(s) 722, 791, 1185, 1227, 1701
Tru9I TTAA 5 cut(s) 722, 791, 1185, 1227, 1701
TscAI CASTG 3 cut(s) 163, 1149, 1895
TseFI GTSAC 4 cut(s) 66, 122, 713, 2194
TseI GCWGC 2 cut(s) 972, 1813
Tsp45I GTSAC 4 cut(s) 66, 122, 713, 2194
TspDTI ATGAA 9 cut(s) 365, 825, 857, 1009, 1272, 1475, 1743, 2060, 2300
TspGWI ACGGA 2 cut(s) 1062, 1164
TspRI CASTG 3 cut(s) 163, 1149, 1895
Vha464I CTTAAG 1 cut(s) 790
VneI GTGCAC 1 cut(s) 2306
VpaK11BI GGWCC 2 cut(s) 752, 1325
XapI RAATTY 5 cut(s) 14, 554, 701, 1316, 2255
XbaI TCTAGA 1 cut(s) 671
XceI RCATGY 3 cut(s) 1107, 1445, 1960
XcmI CCANNNNNNNNNTGG 1 cut(s) 2023
XmiI GTMKAC 1 cut(s) 2076
XmnI GAANNNNTTC 1 cut(s) 151
XspI CTAG 3 cut(s) 71, 672, 2241
ZrmI AGTACT 2 cut(s) 1207, 1361
Zsp2I ATGCAT 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.