Serine hydrolase involved in the detoxification of formaldehyde
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41530 |
| fragaria_vesca | FvH4_6g24520 |
| malus_domestica | MD12G1082500.v1.1 MD14G1077300.v1.1 |
| prunus_persica | Prupe.7G053400_v2.0.a1 Prupe.7G053400_v2.0.a1 |
| pyrus_communis | pycom12g06870 pycom14g06610 |
| rosa_chinensis | RchiOBHm_Chr3g0483631 |
| rosa_laevigata | RLG00000023263 |
| rosa_multiflora | Rmu_co8515891.1_g000001 Rmu_sc0000555.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00398170 |
| rosa_rugosa | Rorug03G0207500 |
| rosa_samantha | Rh3AG256000 Rh3BG292700 Rh3CG290400 Rh3DG286300 |
| rosa_wichuraiana | Rw3G023120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 45 |
| AciI | CCGC | 1 cut(s) | 45 |
| AclWI | GGATC | 2 cut(s) | 101, 117 |
| AcoI | YGGCCR | 1 cut(s) | 46 |
| AcsI | RAATTY | 2 cut(s) | 140, 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 245 |
| AgsI | TTSAA | 2 cut(s) | 146, 219 |
| AluBI | AGCT | 1 cut(s) | 228 |
| AluI | AGCT | 1 cut(s) | 228 |
| Alw26I | GTCTC | 1 cut(s) | 183 |
| AlwI | GGATC | 2 cut(s) | 101, 117 |
| AoxI | GGCC | 1 cut(s) | 46 |
| ApoI | RAATTY | 2 cut(s) | 140, 241 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 161, 193 |
| AsuII | TTCGAA | 1 cut(s) | 167 |
| BcoDI | GTCTC | 1 cut(s) | 183 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 1 cut(s) | 46 |
| BlsI | GCNGC | 1 cut(s) | 47 |
| BmsI | GCATC | 1 cut(s) | 184 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| Bpu14I | TTCGAA | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 2 cut(s) | 61, 214 |
| BsaI | GGTCTC | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 245 |
| Bse1I | ACTGG | 2 cut(s) | 15, 116 |
| BseGI | GGATG | 1 cut(s) | 235 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 245 |
| BseNI | ACTGG | 2 cut(s) | 15, 116 |
| BshFI | GGCC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 245 |
| BsmAI | GTCTC | 1 cut(s) | 183 |
| BsnI | GGCC | 1 cut(s) | 48 |
| Bso31I | GGTCTC | 1 cut(s) | 183 |
| Bsp119I | TTCGAA | 1 cut(s) | 167 |
| Bsp143I | GATC | 3 cut(s) | 22, 93, 122 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspANI | GGCC | 1 cut(s) | 48 |
| BspPI | GGATC | 2 cut(s) | 101, 117 |
| BspT104I | TTCGAA | 1 cut(s) | 167 |
| BspTNI | GGTCTC | 1 cut(s) | 183 |
| BsrBI | CCGCTC | 1 cut(s) | 45 |
| BsrI | ACTGG | 2 cut(s) | 15, 116 |
| BssMI | GATC | 3 cut(s) | 22, 93, 122 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| BstBI | TTCGAA | 1 cut(s) | 167 |
| BstDEI | CTNAG | 1 cut(s) | 19 |
| BstF5I | GGATG | 1 cut(s) | 235 |
| BstKTI | GATC | 3 cut(s) | 25, 96, 125 |
| BstMAI | GTCTC | 1 cut(s) | 183 |
| BstMBI | GATC | 3 cut(s) | 22, 93, 122 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstX2I | RGATCY | 3 cut(s) | 22, 93, 122 |
| BstYI | RGATCY | 3 cut(s) | 22, 93, 122 |
| BsuRI | GGCC | 1 cut(s) | 48 |
| BtsCI | GGATG | 1 cut(s) | 235 |
| CviJI | RGCY | 2 cut(s) | 48, 228 |
| CviKI_1 | RGCY | 2 cut(s) | 48, 228 |
| DdeI | CTNAG | 1 cut(s) | 19 |
| DpnI | GATC | 3 cut(s) | 24, 95, 124 |
| DpnII | GATC | 3 cut(s) | 22, 93, 122 |
| EaeI | YGGCCR | 1 cut(s) | 46 |
| Eco31I | GGTCTC | 1 cut(s) | 183 |
| EcoRI | GAATTC | 1 cut(s) | 241 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 23, 55 |
| Fnu4HI | GCNGC | 1 cut(s) | 46 |
| FokI | GGATG | 1 cut(s) | 222 |
| Fsp4HI | GCNGC | 1 cut(s) | 46 |
| GluI | GCNGC | 1 cut(s) | 46 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeIII | GGCC | 1 cut(s) | 48 |
| Hpy188I | TCNGA | 1 cut(s) | 240 |
| Hpy188III | TCNNGA | 1 cut(s) | 246 |
| HpyAV | CCTTC | 1 cut(s) | 174 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 2 cut(s) | 67, 197 |
| HpyF3I | CTNAG | 1 cut(s) | 19 |
| Kzo9I | GATC | 3 cut(s) | 22, 93, 122 |
| LpnPI | CCDG | 4 cut(s) | 71, 97, 144, 231 |
| LweI | GCATC | 1 cut(s) | 184 |
| MalI | GATC | 3 cut(s) | 24, 95, 124 |
| MbiI | CCGCTC | 1 cut(s) | 45 |
| MboI | GATC | 3 cut(s) | 22, 93, 122 |
| MboII | GAAGA | 1 cut(s) | 132 |
| MflI | RGATCY | 3 cut(s) | 22, 93, 122 |
| MluCI | AATT | 4 cut(s) | 50, 140, 213, 241 |
| MnlI | CCTC | 1 cut(s) | 171 |
| NdeII | GATC | 3 cut(s) | 22, 93, 122 |
| NspV | TTCGAA | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 47 |
| PsuI | RGATCY | 3 cut(s) | 22, 93, 122 |
| SatI | GCNGC | 1 cut(s) | 46 |
| Sau3AI | GATC | 3 cut(s) | 22, 93, 122 |
| SetI | ASST | 2 cut(s) | 163, 230 |
| SfaNI | GCATC | 1 cut(s) | 184 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SfuI | TTCGAA | 1 cut(s) | 167 |
| SgeI | CNNG | 9 cut(s) | 23, 52, 70, 94, 102, 124, 143, 243, 258 |
| SmlI | CTYRAG | 2 cut(s) | 40, 229 |
| SmoI | CTYRAG | 2 cut(s) | 40, 229 |
| Sse9I | AATT | 4 cut(s) | 50, 140, 213, 241 |
| SsiI | CCGC | 1 cut(s) | 45 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaqI | TCGA | 1 cut(s) | 167 |
| TasI | AATT | 4 cut(s) | 50, 140, 213, 241 |
| TauI | GCSGC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 1 cut(s) | 122 |
| XapI | RAATTY | 2 cut(s) | 140, 241 |