Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004134

Physical Location & Seq

Genomic Coordinates Forward (+)

35579686 .. 35582542

Gene Structure 2857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0324500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGCAATGTCAAAGGCAAAAAAAGGGCGGAATGAAACAAACAAAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTAGCTGCAAAGATTTCTGTTCCACTTCAATTGTCGAAGATGATTCCAGACCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAACAAAAAAAATAAAGAAAGATGGGGTTTGGATCAAGAAGGAAGCTTATCTTCTAAATGGCATCTCTGGTCATGCAGTACGAGGTGAGATTATGGCCATTATGGGGCCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTGGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTTAGAGTCGAAGGAAAAGCTGTTACTACAAGCTACATGAAGATGGTTTCCTCTTATGTGATGCAAGATGACCAGCTATTCCCAATGTTGACCGTGTTCGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAAGGATGAGAAGAGAAAGAGAGTCTATGAGCTCCTTGACCAGCTCGGCTTGCAGACTGCAACACATACATACATTGGTGATGAGGGGAGGAGAGGAGTCTCAGGAGGTGAAAGACGCAGGGTATCAATCGGAATTGACATCATCCACAAACCTTCTCTACTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCCACGAGTGCTTACAGTGTTGTAGAGAAGGTGAAGGAAATAGCTCGAGGCGGTAGCATTGTGCTCATGACTATCCATCAGCCTTCCTATCGTATTCAAAATCTCTTGGACCGCATGACAGTCCTAGCAAGAGGAAAACTAATATATTTGGGAAGTCCACATGGTTTGTCTTCTCACCTTTCTGGATTTGGAAGGCCAGTTCCTGATGGAGAAAACAACCTTGAGTATCTCCTGGATGTGATTAGAGAATATGATGAGTCAAATGTAGGACTAGAACCGCTTGTTGTCTACCTTCGCGATGGAATCAAACCTGATCAGGTGTCAAGAACCCCAATTGCAAGAACACTAAGGACACCACGAACTCCTTATAAAAAGACCCCTTCATCTAAACACATGCTCAGCCTCAAGAGCAACTCGACACCTGGACCAAATTCTCGCCCATCTGATGATTATGATGATGAGGAGGATGATGAGTTTGAGGATGAGAACTTTGACAACTCCTTGGAAAGGAAATCAATTCAGACACCAATGCAACACTTTACAAGTGGTGTCTATAACCCTCGTTTAGCTTCACATTTCTACAAAGACTTCTCAGTGTGGATATATCATAGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCAGGAAGGACCCCTGGAAAGACACCAATGTCAGTGTCAGGACTAAGAAGTGTTGTTGAAAACCAATATGCAACACCTCAACACTACCCTCCTAAGCCAAGTAGGACTAAAGCCCCTGTTGTCTACAACCCTTCCATCGATGACTCTTCATATGGACAATCATATGAAGAGTTTGAGATGGAAGAAGATGAGCTTGATGAGATAGAACTCGGGCCTAAGTTTGCAAACCCCTGGCTCCGTGAAGTTGCAGTCCTCTCATGGCGTACAACACTCAATGTGATTCGTACCCCTGAACTCTTCCTCTCACGAGAGATTGTGTTGGCTGTCATGGCACTCATTCTATCTTCCCTTTTCAATAACCTACATGAGGAGAACTTCAAAAACGTAAACAGGCTTCTCAACTTCTACATATTTGCTGTTTGCCTGGTCTTCTTTTCCTCCAATGATGCTGTCCCGACTTTCATCCAAGAAAGGTTCATTTTTATCAGGGAAACTTCTCATAATGCTTACCGTGCTTCTTCCTACGTCATATCTTCCCTTATTGTTTACCTCCCATTTTTCGCCATTCAAGCTTTCACATTTGCTGCCATAACCAAATTCATGCTTCACCTCAGAAGTAGTCTTTTCTACTTCTGGATAATCTTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGCGCCCTGGTTCCTAGTTATATTACTGGATATGCTGTAGTGATAGCTACCACAGCTCTGTTCTTTCTCACTTGCGGCTTTTTCTTGAAACGTACTCAGATCCCAAATTACTGGGTTTGGGTGCACTACATCTCTGCGATTAAGTACCCATTTGAGGCAATGCTAACAAATGAATTCAAAAATATACACTGCTACACTGGCAATGCATCGGATCTTTCACCTGGGCCTTTAGGAGATCTGAAGTTGAGTAAAGTGCACAATGACACACTATCGCTCAGAGGTTGCCTACTGATTGGACAAGATGTTATACAGTCAATGGATATCAATCACGATAGCATCTGGTATGATATCGGAATCTTGCTAGCTTGGGGTGTTCTATATCGGCTTCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

821

Amino Acids

92.85

Weight (kDa)

8.44

Isoelectric Point (pI)

38.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	73 - 225	2.1e-28	ABC transporter
ABC2_membrane	PF01061	529 - 736	1.5e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	571 - 808	7e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43680 AT5G43680
fragaria_vesca	FvH4_4g02310
malus_domestica	MD04G1026200.v1.1
prunus_persica	Prupe.1G027700_v2.0.a1 Prupe.1G027700_v2.0.a1 Prupe.1G027700_v2.0.a1 Prupe.1G027700_v2.0.a1 Prupe.1G175900_v2.0.a1 Prupe.1G175900_v2.0.a1 Prupe.1G175900_v2.0.a1 Prupe.1G175900_v2.0.a1 Prupe.1G175900_v2.0.a1 Prupe.2G050700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0389631
rosa_laevigata	RLG00000009965 RLG00000019817
rosa_multiflora	Rmu_sc0007419.1_g000005 Rmu_sc0034173.1_g000001
rosa_roxburghii	Rroxscaffold_5G00335620
rosa_rugosa	Rorug02G0358300 Rorug03G0324300 Rorug03G0324400 Rorug03G0324500 Rorug03G0324600
rosa_samantha	Rh2AG407700 Rh2CG393700 Rh2DG427400 Rh4AG029100 Rh4BG022300 Rh4CG031100 Rh4DG022800
rosa_wichuraiana	Rw4G002170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1053, 2003
AasI	GACNNNNNNGTC	1 cut(s)	1372
AccB7I	CCANNNNNTGG	1 cut(s)	674
AccI	GTMKAC	2 cut(s)	972, 1467
AccII	CGCG	1 cut(s)	981
AciI	CCGC	6 cut(s)	28, 735, 796, 962, 1315, 2106
AclWI	GGATC	3 cut(s)	203, 2125, 2250
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	4 cut(s)	140, 1114, 1940, 2204
AcuI	CTGAAG	1 cut(s)	2291
AfaI	GTAC	5 cut(s)	243, 1609, 1630, 2125, 2177
AfiI	CCNNNNNNNGG	6 cut(s)	131, 267, 674, 1191, 1711, 2185
AjnI	CCWGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
AloI	GAACNNNNNNTCC	2 cut(s)	867, 899
Alw21I	GWGCWC	4 cut(s)	525, 750, 2157, 2289
Alw26I	GTCTC	2 cut(s)	440, 595
Alw44I	GTGCAC	2 cut(s)	2153, 2285
AlwI	GGATC	3 cut(s)	203, 2125, 2250
AlwNI	CAGNNNCTG	1 cut(s)	887
Ama87I	CYCGRG	2 cut(s)	729, 1553
AoxI	GGCC	6 cut(s)	133, 258, 269, 878, 1556, 2255
ApaLI	GTGCAC	2 cut(s)	2153, 2285
ApeKI	GCWGC	3 cut(s)	83, 461, 1928
ApoI	RAATTY	4 cut(s)	140, 1114, 1940, 2204
AspLEI	GCGC	1 cut(s)	2036
AspS9I	GGNCC	7 cut(s)	269, 793, 1109, 1353, 1556, 2255, 2431
AsuHPI	GGTGA	7 cut(s)	260, 581, 611, 727, 851, 1943, 2241
AsuNHI	GCTAGC	1 cut(s)	2392
AvaI	CYCGRG	2 cut(s)	729, 1553
AvaII	GGWCC	4 cut(s)	793, 1109, 1353, 2431
BaeGI	GKGCMC	2 cut(s)	2157, 2289
BalI	TGGCCA	1 cut(s)	260
BanII	GRGCYC	1 cut(s)	525
BarI	GAAGNNNNNNTAC	2 cut(s)	1722, 1754
BauI	CACGAG	2 cut(s)	688, 1650
BbsI	GAAGAC	2 cut(s)	846, 1765
Bbv12I	GWGCWC	4 cut(s)	525, 750, 2157, 2289
BbvCI	CCTCAGC	1 cut(s)	465
BbvI	GCAGC	3 cut(s)	70, 473, 1915
BccI	CCATC	9 cut(s)	179, 382, 768, 884, 977, 1132, 1330, 1487, 1516
BciT130I	CCWGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
BclI	TGATCA	1 cut(s)	997
BcoDI	GTCTC	2 cut(s)	440, 595
BfaI	CTAG	6 cut(s)	273, 809, 956, 1338, 2046, 2393
BfmI	CTRYAG	2 cut(s)	157, 2067
BfoI	RGCGCY	1 cut(s)	2037
BglII	AGATCT	1 cut(s)	2266
BisI	GCNGC	5 cut(s)	84, 462, 1315, 1929, 2107
BlpI	GCTNAGC	1 cut(s)	1082
BlsI	GCNGC	5 cut(s)	85, 463, 1316, 1930, 2108
Bme1390I	CCNGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
Bme18I	GGWCC	4 cut(s)	793, 1109, 1353, 2431
BmeT110I	CYCGRG	2 cut(s)	729, 1553
BmgT120I	GGNCC	7 cut(s)	269, 793, 1109, 1353, 1556, 2255, 2431
BmiI	GGNNCC	4 cut(s)	270, 1355, 1580, 2043
BmrFI	CCNGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
BmrI	ACTGGG	1 cut(s)	2152
BmsI	GCATC	6 cut(s)	234, 292, 396, 1780, 2246, 2376
BmtI	GCTAGC	1 cut(s)	2396
BmuI	ACTGGG	1 cut(s)	2152
BpiI	GAAGAC	2 cut(s)	846, 1765
BpmI	CTGGAG	1 cut(s)	1329
Bpu10I	CCTNAGC	2 cut(s)	465, 1437
Bpu1102I	GCTNAGC	1 cut(s)	1082
BpuEI	CTTGAG	4 cut(s)	71, 309, 926, 1073
Bsa29I	ATCGAT	1 cut(s)	1482
BsaBI	GATNNNNATC	1 cut(s)	2355
BsaJI	CCNNGG	8 cut(s)	130, 306, 492, 1185, 1357, 1574, 2037, 2252
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 267, 674, 1191, 1711, 2185
Bse1I	ACTGG	4 cut(s)	881, 2062, 2147, 2233
Bse3DI	GCAATG	3 cut(s)	12, 2196, 2239
Bse8I	GATNNNNATC	1 cut(s)	2355
BseBI	CCWGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
BseCI	ATCGAT	1 cut(s)	1482
BseDI	CCNNGG	8 cut(s)	130, 306, 492, 1185, 1357, 1574, 2037, 2252
BseGI	GGATG	6 cut(s)	502, 633, 925, 1156, 1171, 1806
BseJI	GATNNNNATC	1 cut(s)	2355
BseLI	CCNNNNNNNGG	6 cut(s)	131, 267, 674, 1191, 1711, 2185
BseMI	GCAATG	3 cut(s)	12, 2196, 2239
BseMII	CTCAG	8 cut(s)	456, 606, 1096, 1290, 1969, 2141, 2320, 2449
BseNI	ACTGG	4 cut(s)	881, 2062, 2147, 2233
BseRI	GAGGAG	5 cut(s)	595, 600, 1160, 1299, 1727
BseSI	GKGCMC	2 cut(s)	2157, 2289
BseXI	GCAGC	3 cut(s)	70, 473, 1915
Bsh1236I	CGCG	1 cut(s)	981
BshFI	GGCC	6 cut(s)	135, 260, 271, 880, 1558, 2257
BshVI	ATCGAT	1 cut(s)	1482
BsiHKAI	GWGCWC	4 cut(s)	525, 750, 2157, 2289
BsiHKCI	CYCGRG	2 cut(s)	729, 1553
BslFI	GGGAC	1 cut(s)	1781
BslI	CCNNNNNNNGG	6 cut(s)	131, 267, 674, 1191, 1711, 2185
BsmAI	GTCTC	2 cut(s)	440, 595
BsmFI	GGGAC	1 cut(s)	1781
BsnI	GGCC	6 cut(s)	135, 260, 271, 880, 1558, 2257
BsoBI	CYCGRG	2 cut(s)	729, 1553
Bsp1286I	GDGCHC	4 cut(s)	525, 750, 2157, 2289
Bsp143I	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
Bsp1720I	GCTNAGC	1 cut(s)	1082
Bsp68I	TCGCGA	1 cut(s)	981
BspACI	CCGC	6 cut(s)	28, 735, 796, 962, 1315, 2106
BspANI	GGCC	6 cut(s)	135, 260, 271, 880, 1558, 2257
BspCNI	CTCAG	8 cut(s)	457, 605, 1095, 1289, 1968, 2140, 2319, 2448
BspDI	ATCGAT	1 cut(s)	1482
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	1 cut(s)	750
BspLI	GGNNCC	4 cut(s)	270, 1355, 1580, 2043
BspOI	GCTAGC	1 cut(s)	2396
BspPI	GGATC	3 cut(s)	203, 2125, 2250
BsrDI	GCAATG	3 cut(s)	12, 2196, 2239
BsrI	ACTGG	4 cut(s)	881, 2062, 2147, 2233
BssECI	CCNNGG	8 cut(s)	130, 306, 492, 1185, 1357, 1574, 2037, 2252
BssMI	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
BssSI	CACGAG	2 cut(s)	688, 1650
BssT1I	CCWWGG	4 cut(s)	130, 306, 492, 1185
Bst2BI	CACGAG	2 cut(s)	688, 1650
Bst2UI	CCWGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
Bst4CI	ACNGT	7 cut(s)	161, 439, 654, 701, 805, 1856, 2343
Bst6I	CTCTTC	5 cut(s)	497, 1495, 1506, 1646, 2426
BstC8I	GCNNGC	2 cut(s)	542, 2394
BstENI	CCTNNNNNAGG	2 cut(s)	1189, 1709
BstF5I	GGATG	6 cut(s)	502, 633, 925, 1156, 1171, 1806
BstFNI	CGCG	1 cut(s)	981
BstH2I	RGCGCY	1 cut(s)	2037
BstHHI	GCGC	1 cut(s)	2036
BstKTI	GATC	5 cut(s)	198, 1000, 2133, 2245, 2269
BstMAI	GTCTC	2 cut(s)	440, 595
BstMBI	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
BstMWI	GCNNNNNNNGC	7 cut(s)	541, 1092, 1673, 1856, 1913, 2084, 2229
BstNI	CCWGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
BstNSI	RCATGY	1 cut(s)	1081
BstSCI	CCNGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
BstSFI	CTRYAG	2 cut(s)	157, 2067
BstSLI	GKGCMC	2 cut(s)	2157, 2289
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	3 cut(s)	70, 473, 1915
BstV2I	GAAGAC	2 cut(s)	846, 1765
BstX2I	RGATCY	3 cut(s)	2130, 2242, 2266
BstXI	CCANNNNNNTGG	2 cut(s)	1326, 2142
BstYI	RGATCY	3 cut(s)	2130, 2242, 2266
Bsu15I	ATCGAT	1 cut(s)	1482
BsuRI	GGCC	6 cut(s)	135, 260, 271, 880, 1558, 2257
BsuTUI	ATCGAT	1 cut(s)	1482
BtgZI	GCGATG	1 cut(s)	996
BtsCI	GGATG	6 cut(s)	502, 633, 925, 1156, 1171, 1806
BtsI	GCAGTG	1 cut(s)	2218
BtsIMutI	CAGTG	6 cut(s)	166, 706, 1284, 1383, 2218, 2226
BtuMI	TCGCGA	1 cut(s)	981
Cac8I	GCNNGC	2 cut(s)	542, 2394
CaiI	CAGNNNCTG	1 cut(s)	887
CciI	TCATGA	1 cut(s)	750
CfoI	GCGC	1 cut(s)	2036
Cfr13I	GGNCC	7 cut(s)	269, 793, 1109, 1353, 1556, 2255, 2431
ClaI	ATCGAT	1 cut(s)	1482
CseI	GACGC	1 cut(s)	615
Csp6I	GTAC	5 cut(s)	242, 1608, 1629, 2124, 2176
CspCI	CAANNNNNGTGG	4 cut(s)	90, 125, 831, 866
CviQI	GTAC	5 cut(s)	242, 1608, 1629, 2124, 2176
DpnI	GATC	5 cut(s)	197, 999, 2132, 2244, 2268
DpnII	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
DrdI	GACNNNNNNGTC	1 cut(s)	1372
DseDI	GACNNNNNNGTC	1 cut(s)	1372
EaeI	YGGCCR	1 cut(s)	258
Eam1104I	CTCTTC	5 cut(s)	497, 1495, 1506, 1646, 2426
EarI	CTCTTC	5 cut(s)	497, 1495, 1506, 1646, 2426
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	1 cut(s)	523
Eco130I	CCWWGG	4 cut(s)	130, 306, 492, 1185
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	1 cut(s)	525
Eco32I	GATATC	2 cut(s)	2353, 2380
Eco47I	GGWCC	4 cut(s)	793, 1109, 1353, 2431
Eco53kI	GAGCTC	1 cut(s)	523
Eco57I	CTGAAG	1 cut(s)	2291
Eco88I	CYCGRG	2 cut(s)	729, 1553
EcoICRI	GAGCTC	1 cut(s)	523
EcoNI	CCTNNNNNAGG	2 cut(s)	1189, 1709
EcoO109I	RGGNCCY	2 cut(s)	269, 1353
EcoRI	GAATTC	2 cut(s)	140, 2204
EcoRII	CCWGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
EcoRV	GATATC	2 cut(s)	2353, 2380
EcoT14I	CCWWGG	4 cut(s)	130, 306, 492, 1185
EcoT22I	ATGCAT	1 cut(s)	2239
EcoT38I	GRGCYC	1 cut(s)	525
ErhI	CCWWGG	4 cut(s)	130, 306, 492, 1185
FalI	AAGNNNNNCTT	6 cut(s)	198, 230, 318, 350, 1521, 1553
FaqI	GGGAC	1 cut(s)	1781
FauNDI	CATATG	2 cut(s)	1495, 1507
FbaI	TGATCA	1 cut(s)	997
FblI	GTMKAC	2 cut(s)	972, 1467
Fnu4HI	GCNGC	5 cut(s)	84, 462, 1315, 1929, 2107
FokI	GGATG	6 cut(s)	509, 620, 932, 1163, 1178, 1793
FriOI	GRGCYC	1 cut(s)	525
Fsp4HI	GCNGC	5 cut(s)	84, 462, 1315, 1929, 2107
FspBI	CTAG	6 cut(s)	273, 809, 956, 1338, 2046, 2393
GlaI	GCGC	1 cut(s)	2035
GluI	GCNGC	5 cut(s)	84, 462, 1315, 1929, 2107
GsuI	CTGGAG	1 cut(s)	1329
HaeII	RGCGCY	1 cut(s)	2037
HaeIII	GGCC	6 cut(s)	135, 260, 271, 880, 1558, 2257
HgaI	GACGC	1 cut(s)	615
HhaI	GCGC	1 cut(s)	2036
Hin6I	GCGC	1 cut(s)	2034
HinP1I	GCGC	1 cut(s)	2034
HincII	GTYRAC	1 cut(s)	435
HindII	GTYRAC	1 cut(s)	435
HindIII	AAGCTT	2 cut(s)	207, 1914
HphI	GGTGA	7 cut(s)	260, 581, 611, 727, 851, 1943, 2241
Hpy166II	GTNNAC	8 cut(s)	435, 842, 973, 1468, 1732, 1891, 2155, 2287
Hpy8I	GTNNAC	8 cut(s)	435, 842, 973, 1468, 1732, 1891, 2155, 2287
HpyCH4III	ACNGT	7 cut(s)	161, 439, 654, 701, 805, 1856, 2343
HpyCH4IV	ACGT	3 cut(s)	1728, 1869, 2122
HpyF10VI	GCNNNNNNNGC	7 cut(s)	541, 1092, 1673, 1856, 1913, 2084, 2229
HpySE526I	ACGT	3 cut(s)	1728, 1869, 2122
HspAI	GCGC	1 cut(s)	2034
Ksp22I	TGATCA	1 cut(s)	997
Kzo9I	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
LmnI	GCTCC	2 cut(s)	528, 1584
Lsp1109I	GCAGC	3 cut(s)	70, 473, 1915
LweI	GCATC	6 cut(s)	234, 292, 396, 1780, 2246, 2376
MaeI	CTAG	6 cut(s)	273, 809, 956, 1338, 2046, 2393
MaeII	ACGT	3 cut(s)	1728, 1869, 2122
MaeIII	GTNAC	2 cut(s)	163, 367
MalI	GATC	5 cut(s)	197, 999, 2132, 2244, 2268
MboI	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
MfeI	CAATTG	2 cut(s)	107, 1017
MflI	RGATCY	3 cut(s)	2130, 2242, 2266
MhlI	GDGCHC	4 cut(s)	525, 750, 2157, 2289
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	9 cut(s)	107, 140, 624, 1017, 1114, 1200, 1940, 2137, 2204
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	7 cut(s)	360, 522, 597, 677, 950, 1324, 1481
Mox20I	TGGCCA	1 cut(s)	260
Mph1103I	ATGCAT	1 cut(s)	2239
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	1 cut(s)	2172
MslI	CAYNNNNRTG	3 cut(s)	386, 1324, 2027
Msp20I	TGGCCA	1 cut(s)	260
MspA1I	CMGCKG	1 cut(s)	464
MspR9I	CCNGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
MunI	CAATTG	2 cut(s)	107, 1017
MvaI	CCWGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	7 cut(s)	541, 1092, 1673, 1856, 1913, 2084, 2229
NdeI	CATATG	2 cut(s)	1495, 1507
NdeII	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
NheI	GCTAGC	1 cut(s)	2392
NlaIV	GGNNCC	4 cut(s)	270, 1355, 1580, 2043
NmeAIII	GCCGAG	1 cut(s)	516
NruI	TCGCGA	1 cut(s)	981
NsiI	ATGCAT	1 cut(s)	2239
NspI	RCATGY	1 cut(s)	1081
PaeR7I	CTCGAG	1 cut(s)	729
PagI	TCATGA	1 cut(s)	750
PceI	AGGCCT	1 cut(s)	135
PfeI	GAWTC	5 cut(s)	121, 987, 1624, 2385, 2439
PflMI	CCANNNNNTGG	1 cut(s)	674
PfoI	TCCNGGA	2 cut(s)	915, 1345
PkrI	GCNGC	5 cut(s)	85, 463, 1316, 1930, 2108
PleI	GAGTC	7 cut(s)	359, 521, 596, 677, 949, 1324, 1481
PpsI	GAGTC	7 cut(s)	359, 521, 596, 677, 949, 1324, 1481
PpuMI	RGGWCCY	1 cut(s)	1353
PsiI	TTATAA	2 cut(s)	1053, 2003
Psp124BI	GAGCTC	1 cut(s)	525
Psp5II	RGGWCCY	1 cut(s)	1353
Psp6I	CCWGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
PspGI	CCWGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
PspN4I	GGNNCC	4 cut(s)	270, 1355, 1580, 2043
PspPI	GGNCC	7 cut(s)	269, 793, 1109, 1353, 1556, 2255, 2431
PspPPI	RGGWCCY	1 cut(s)	1353
PspXI	VCTCGAGB	1 cut(s)	729
PstNI	CAGNNNCTG	1 cut(s)	887
PsuI	RGATCY	3 cut(s)	2130, 2242, 2266
PvuII	CAGCTG	1 cut(s)	464
RruI	TCGCGA	1 cut(s)	981
RsaI	GTAC	5 cut(s)	243, 1609, 1630, 2125, 2177
RsaNI	GTAC	5 cut(s)	242, 1608, 1629, 2124, 2176
RseI	CAYNNNNRTG	3 cut(s)	386, 1324, 2027
SacI	GAGCTC	1 cut(s)	525
SaqAI	TTAA	1 cut(s)	2172
SatI	GCNGC	5 cut(s)	84, 462, 1315, 1929, 2107
Sau3AI	GATC	5 cut(s)	195, 997, 2130, 2242, 2266
Sau96I	GGNCC	7 cut(s)	269, 793, 1109, 1353, 1556, 2255, 2431
SchI	GAGTC	7 cut(s)	360, 522, 597, 677, 950, 1324, 1481
ScrFI	CCNGG	8 cut(s)	917, 1107, 1347, 1359, 1576, 1769, 2039, 2253
SduI	GDGCHC	4 cut(s)	525, 750, 2157, 2289
SfaNI	GCATC	6 cut(s)	234, 292, 396, 1780, 2246, 2376
SfcI	CTRYAG	2 cut(s)	157, 2067
Sfr274I	CTCGAG	1 cut(s)	729
SinI	GGWCC	4 cut(s)	793, 1109, 1353, 2431
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	3 cut(s)	386, 1324, 2027
SmlI	CTYRAG	5 cut(s)	50, 324, 729, 905, 1088
SmoI	CTYRAG	5 cut(s)	50, 324, 729, 905, 1088
Sse9I	AATT	9 cut(s)	107, 140, 624, 1017, 1114, 1200, 1940, 2137, 2204
SseBI	AGGCCT	1 cut(s)	135
SsiI	CCGC	6 cut(s)	28, 735, 796, 962, 1315, 2106
SspMI	CTAG	6 cut(s)	273, 809, 956, 1338, 2046, 2393
SstI	GAGCTC	1 cut(s)	525
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	8 cut(s)	915, 1105, 1345, 1357, 1574, 1767, 2037, 2251
StyI	CCWWGG	4 cut(s)	130, 306, 492, 1185
TaaI	ACNGT	7 cut(s)	161, 439, 654, 701, 805, 1856, 2343
TaiI	ACGT	3 cut(s)	1731, 1872, 2125
TaqI	TCGA	7 cut(s)	113, 300, 354, 444, 730, 1100, 1482
TasI	AATT	9 cut(s)	107, 140, 624, 1017, 1114, 1200, 1940, 2137, 2204
TauI	GCSGC	2 cut(s)	1317, 2109
TfiI	GAWTC	5 cut(s)	121, 987, 1624, 2385, 2439
Tru1I	TTAA	1 cut(s)	2172
Tru9I	TTAA	1 cut(s)	2172
TscAI	CASTG	6 cut(s)	166, 706, 1284, 1383, 2225, 2233
TseI	GCWGC	3 cut(s)	83, 461, 1928
TspGWI	ACGGA	1 cut(s)	1571
TspRI	CASTG	6 cut(s)	166, 706, 1284, 1383, 2225, 2233
Van91I	CCANNNNNTGG	1 cut(s)	674
VneI	GTGCAC	2 cut(s)	2153, 2285
VpaK11BI	GGWCC	4 cut(s)	793, 1109, 1353, 2431
XagI	CCTNNNNNAGG	2 cut(s)	1189, 1709
XapI	RAATTY	4 cut(s)	140, 1114, 1940, 2204
XceI	RCATGY	1 cut(s)	1081
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	2 cut(s)	972, 1467
XspI	CTAG	6 cut(s)	273, 809, 956, 1338, 2046, 2393
Zsp2I	ATGCAT	1 cut(s)	2239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.