Rorug03G0333500

transferase activity, transferring hexosyl groups

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
39078648 .. 39079141
494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0333500.1

Sequence Viewer

Length: 378 bp
ATGTTTGATATGGGTCATGCACCATTTTCTATTTTCATTGATGAAGCACGAGATCATTCCATTGAAGAACAGATGGCAGTTGTTCTTCGCTATGTAGAGAACAAAGGCCAAGTAATTGAAGGAGTGGTTAACATTGTTAGAGCATCATGTAAATGTCGTGATCTGCTTCGAGTGGAACAACAGAATGAACTGATGGAAGCTCTTCACAATAATGAGCTTCTAAGTAGAAGAGGGTTGAATCAAGAAACTACTCTTAAACGTCCTGGTGATACATGTTGGGGTTCACATTACGGCACCATACTGAGTATTATTTCTATGTTTTCTTCCACAATTAAGGTGATTGAAATGATTATTGAAGATGGAACATATCTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

14.26

Weight (kDa)

5.03

Isoelectric Point (pI)

61.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 293
AflIII ACRYGT 1 cut(s) 272
AgsI TTSAA 5 cut(s) 65, 119, 238, 344, 356
AjnI CCWGG 1 cut(s) 262
AluBI AGCT 2 cut(s) 200, 217
AluI AGCT 2 cut(s) 200, 217
AoxI GGCC 1 cut(s) 106
Asp700I GAANNNNTTC 1 cut(s) 201
AsuHPI GGTGA 2 cut(s) 278, 349
BanI GGYRCC 1 cut(s) 293
BauI CACGAG 1 cut(s) 48
BccI CCATC 3 cut(s) 67, 187, 353
BceAI ACGGC 1 cut(s) 307
BciT130I CCWGG 1 cut(s) 264
Bme1390I CCNGG 1 cut(s) 264
BmiI GGNNCC 1 cut(s) 295
BmrFI CCNGG 1 cut(s) 264
BmsI GCATC 1 cut(s) 152
BseBI CCWGG 1 cut(s) 264
BseMII CTCAG 1 cut(s) 293
BshFI GGCC 1 cut(s) 108
BshNI GGYRCC 1 cut(s) 293
BsnI GGCC 1 cut(s) 108
Bsp143I GATC 2 cut(s) 52, 160
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 294
BspLI GGNNCC 1 cut(s) 295
BspQI GCTCTTC 1 cut(s) 207
BspT107I GGYRCC 1 cut(s) 293
BssMI GATC 2 cut(s) 52, 160
BssSI CACGAG 1 cut(s) 48
Bst2BI CACGAG 1 cut(s) 48
Bst2UI CCWGG 1 cut(s) 264
Bst6I CTCTTC 2 cut(s) 207, 223
BstDEI CTNAG 2 cut(s) 221, 302
BstKTI GATC 2 cut(s) 55, 163
BstMBI GATC 2 cut(s) 52, 160
BstNI CCWGG 1 cut(s) 264
BstNSI RCATGY 1 cut(s) 276
BstSCI CCNGG 1 cut(s) 262
BsuRI GGCC 1 cut(s) 108
CviAII CATG 3 cut(s) 17, 147, 273
CviJI RGCY 3 cut(s) 108, 200, 217
CviKI_1 RGCY 3 cut(s) 108, 200, 217
DdeI CTNAG 2 cut(s) 221, 302
DpnI GATC 2 cut(s) 54, 162
DpnII GATC 2 cut(s) 52, 160
Eam1104I CTCTTC 2 cut(s) 207, 223
EarI CTCTTC 2 cut(s) 207, 223
EcoRII CCWGG 1 cut(s) 262
FaeI CATG 3 cut(s) 20, 150, 276
FaiI YATR 8 cut(s) 11, 18, 93, 148, 274, 299, 317, 367
FatI CATG 3 cut(s) 16, 146, 272
HaeIII GGCC 1 cut(s) 108
Hin1II CATG 3 cut(s) 20, 150, 276
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 1 cut(s) 238
HpaI GTTAAC 1 cut(s) 130
HphI GGTGA 2 cut(s) 278, 349
Hpy166II GTNNAC 2 cut(s) 130, 284
Hpy188III TCNNGA 3 cut(s) 158, 242, 371
Hpy8I GTNNAC 2 cut(s) 130, 284
HpyAV CCTTC 1 cut(s) 113
HpyCH4IV ACGT 1 cut(s) 259
HpyCH4V TGCA 1 cut(s) 20
HpyF3I CTNAG 2 cut(s) 221, 302
HpySE526I ACGT 1 cut(s) 259
Hsp92II CATG 3 cut(s) 20, 150, 276
KspAI GTTAAC 1 cut(s) 130
Kzo9I GATC 2 cut(s) 52, 160
LguI GCTCTTC 1 cut(s) 207
LpnPI CCDG 2 cut(s) 249, 276
LweI GCATC 1 cut(s) 152
MaeII ACGT 1 cut(s) 259
MalI GATC 2 cut(s) 54, 162
MboI GATC 2 cut(s) 52, 160
MboII GAAGA 6 cut(s) 77, 77, 194, 240, 315, 368
MluCI AATT 2 cut(s) 114, 330
MnlI CCTC 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 201
MseI TTAA 3 cut(s) 129, 255, 333
MslI CAYNNNNRTG 2 cut(s) 151, 210
MspR9I CCNGG 1 cut(s) 264
MvaI CCWGG 1 cut(s) 264
NdeII GATC 2 cut(s) 52, 160
NlaIII CATG 3 cut(s) 20, 150, 276
NlaIV GGNNCC 1 cut(s) 295
NspI RCATGY 1 cut(s) 276
PciI ACATGT 1 cut(s) 272
PciSI GCTCTTC 1 cut(s) 207
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 1 cut(s) 238
PscI ACATGT 1 cut(s) 272
Psp6I CCWGG 1 cut(s) 262
PspGI CCWGG 1 cut(s) 262
PspN4I GGNNCC 1 cut(s) 295
RseI CAYNNNNRTG 2 cut(s) 151, 210
SapI GCTCTTC 1 cut(s) 207
SaqAI TTAA 3 cut(s) 129, 255, 333
Sau3AI GATC 2 cut(s) 52, 160
ScrFI CCNGG 1 cut(s) 264
SetI ASST 4 cut(s) 202, 219, 262, 339
SfaNI GCATC 1 cut(s) 152
SmiMI CAYNNNNRTG 2 cut(s) 151, 210
Sse9I AATT 2 cut(s) 114, 330
StyD4I CCNGG 1 cut(s) 262
TaiI ACGT 1 cut(s) 262
TaqI TCGA 1 cut(s) 169
TasI AATT 2 cut(s) 114, 330
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 3 cut(s) 129, 255, 333
Tru9I TTAA 3 cut(s) 129, 255, 333
TspDTI ATGAA 3 cut(s) 25, 57, 201
XceI RCATGY 1 cut(s) 276
XmnI GAANNNNTTC 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.