Protein FAR-RED ELONGATED HYPOCOTYL
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g28210 |
| rosa_laevigata | RLG00000035802 |
| rosa_multiflora | Rmu_sc0000685.1_g000014 Rmu_sc0001719.1_g000008 Rmu_sc0005507.1_g000039 Rmu_sc0006005.1_g000001 Rmu_sc0026606.1_g000001 |
| rosa_rugosa | Rorug01G0223400 Rorug03G0333200 Rorug03G0333500 |
| rosa_samantha | Rh1AG260800 Rh2BG067100 Rh2CG068400 Rh2CG538900 Rh2DG411000 Rh3AG272900 Rh5BG325800 Rh6BG198100 Rh7AG279400 Rh7CG298600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 51, 81, 111 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 197 |
| AccI | GTMKAC | 3 cut(s) | 932, 1738, 1807 |
| AccIII | TCCGGA | 1 cut(s) | 487 |
| AclWI | GGATC | 4 cut(s) | 774, 1631, 1644, 2105 |
| AcsI | RAATTY | 9 cut(s) | 22, 181, 206, 454, 655, 1171, 1602, 1789, 1893 |
| AcuI | CTGAAG | 1 cut(s) | 1811 |
| AfaI | GTAC | 2 cut(s) | 337, 553 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 197, 908 |
| AhlI | ACTAGT | 1 cut(s) | 725 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 784, 816 |
| AluBI | AGCT | 8 cut(s) | 162, 284, 1025, 1067, 1132, 1451, 1697, 2091 |
| AluI | AGCT | 8 cut(s) | 162, 284, 1025, 1067, 1132, 1451, 1697, 2091 |
| Alw21I | GWGCWC | 3 cut(s) | 952, 1027, 2140 |
| Alw26I | GTCTC | 5 cut(s) | 989, 1293, 1527, 1953, 1996 |
| Alw44I | GTGCAC | 1 cut(s) | 948 |
| AlwI | GGATC | 4 cut(s) | 774, 1631, 1644, 2105 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1107 |
| Aor13HI | TCCGGA | 1 cut(s) | 487 |
| AoxI | GGCC | 3 cut(s) | 817, 1482, 1995 |
| ApaLI | GTGCAC | 1 cut(s) | 948 |
| ApeKI | GCWGC | 5 cut(s) | 29, 269, 593, 1067, 1451 |
| ApoI | RAATTY | 9 cut(s) | 22, 181, 206, 454, 655, 1171, 1602, 1789, 1893 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2058, 2090 |
| AseI | ATTAAT | 3 cut(s) | 168, 1380, 2031 |
| AsuC2I | CCSGG | 1 cut(s) | 821 |
| AsuHPI | GGTGA | 4 cut(s) | 167, 545, 1521, 2062 |
| BaeGI | GKGCMC | 1 cut(s) | 952 |
| BamHI | GGATCC | 1 cut(s) | 1636 |
| BanII | GRGCYC | 2 cut(s) | 9, 1027 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1012, 1044 |
| Bbv12I | GWGCWC | 3 cut(s) | 952, 1027, 2140 |
| BbvCI | CCTCAGC | 1 cut(s) | 33 |
| BbvI | GCAGC | 5 cut(s) | 16, 256, 580, 1054, 1438 |
| BccI | CCATC | 7 cut(s) | 83, 113, 212, 428, 1534, 1697, 1827 |
| BclI | TGATCA | 2 cut(s) | 1045, 1957 |
| BcnI | CCSGG | 1 cut(s) | 821 |
| BcoDI | GTCTC | 5 cut(s) | 989, 1293, 1527, 1953, 1996 |
| BcuI | ACTAGT | 1 cut(s) | 725 |
| BfaI | CTAG | 5 cut(s) | 726, 770, 1095, 1512, 1988 |
| BglII | AGATCT | 1 cut(s) | 1554 |
| BisI | GCNGC | 5 cut(s) | 30, 270, 594, 1068, 1452 |
| BlsI | GCNGC | 5 cut(s) | 31, 271, 595, 1069, 1453 |
| BmcAI | AGTACT | 1 cut(s) | 553 |
| Bme1390I | CCNGG | 1 cut(s) | 821 |
| BmiI | GGNNCC | 2 cut(s) | 1317, 1638 |
| BmrFI | CCNGG | 1 cut(s) | 821 |
| BmsI | GCATC | 4 cut(s) | 688, 799, 879, 2025 |
| BpmI | CTGGAG | 1 cut(s) | 2178 |
| Bpu10I | CCTNAGC | 2 cut(s) | 33, 702 |
| BpuEI | CTTGAG | 4 cut(s) | 808, 1440, 1586, 2020 |
| BpuMI | CCSGG | 1 cut(s) | 821 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1050 |
| BsaI | GGTCTC | 2 cut(s) | 1293, 1953 |
| BsaWI | WCCGGW | 1 cut(s) | 487 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 834, 864 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 197, 908 |
| Bse118I | RCCGGY | 1 cut(s) | 1180 |
| Bse1I | ACTGG | 1 cut(s) | 1283 |
| Bse3DI | GCAATG | 7 cut(s) | 222, 414, 522, 714, 768, 1017, 1779 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1050 |
| BseAI | TCCGGA | 1 cut(s) | 487 |
| BseGI | GGATG | 4 cut(s) | 73, 499, 1708, 2097 |
| BseJI | GATNNNNATC | 1 cut(s) | 1050 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 197, 908 |
| BseMI | GCAATG | 7 cut(s) | 222, 414, 522, 714, 768, 1017, 1779 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseNI | ACTGG | 1 cut(s) | 1283 |
| BseRI | GAGGAG | 2 cut(s) | 1232, 2006 |
| BseSI | GKGCMC | 1 cut(s) | 952 |
| BseXI | GCAGC | 5 cut(s) | 16, 256, 580, 1054, 1438 |
| BshFI | GGCC | 3 cut(s) | 819, 1484, 1997 |
| BsiHKAI | GWGCWC | 3 cut(s) | 952, 1027, 2140 |
| BsiSI | CCGG | 3 cut(s) | 488, 820, 1181 |
| BslFI | GGGAC | 2 cut(s) | 361, 366 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 197, 908 |
| BsmAI | GTCTC | 5 cut(s) | 989, 1293, 1527, 1953, 1996 |
| BsmFI | GGGAC | 2 cut(s) | 361, 366 |
| BsmI | GAATGC | 1 cut(s) | 559 |
| BsnI | GGCC | 3 cut(s) | 819, 1484, 1997 |
| Bso31I | GGTCTC | 2 cut(s) | 1293, 1953 |
| Bsp1286I | GDGCHC | 4 cut(s) | 9, 952, 1027, 2140 |
| Bsp13I | TCCGGA | 1 cut(s) | 487 |
| Bsp1407I | TGTACA | 1 cut(s) | 335 |
| BspANI | GGCC | 3 cut(s) | 819, 1484, 1997 |
| BspCNI | CTCAG | 1 cut(s) | 25 |
| BspEI | TCCGGA | 1 cut(s) | 487 |
| BspHI | TCATGA | 1 cut(s) | 475 |
| BspLI | GGNNCC | 2 cut(s) | 1317, 1638 |
| BspPI | GGATC | 4 cut(s) | 774, 1631, 1644, 2105 |
| BspQI | GCTCTTC | 1 cut(s) | 1015 |
| BspTNI | GGTCTC | 2 cut(s) | 1293, 1953 |
| BsrDI | GCAATG | 7 cut(s) | 222, 414, 522, 714, 768, 1017, 1779 |
| BsrFI | RCCGGY | 1 cut(s) | 1180 |
| BsrGI | TGTACA | 1 cut(s) | 335 |
| BsrI | ACTGG | 1 cut(s) | 1283 |
| BssAI | RCCGGY | 1 cut(s) | 1180 |
| BssNAI | GTATAC | 1 cut(s) | 1808 |
| Bst1107I | GTATAC | 1 cut(s) | 1808 |
| Bst4CI | ACNGT | 4 cut(s) | 231, 609, 1304, 2183 |
| Bst6I | CTCTTC | 3 cut(s) | 732, 1015, 1677 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 329, 956, 1507 |
| BstAUI | TGTACA | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 2 cut(s) | 1612, 1770 |
| BstDEI | CTNAG | 3 cut(s) | 33, 702, 1875 |
| BstF5I | GGATG | 4 cut(s) | 73, 499, 1708, 2097 |
| BstMAI | GTCTC | 5 cut(s) | 989, 1293, 1527, 1953, 1996 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 329, 599, 956, 1031, 1064, 1073, 1507 |
| BstNSI | RCATGY | 3 cut(s) | 419, 1614, 1772 |
| BstSCI | CCNGG | 1 cut(s) | 819 |
| BstSLI | GKGCMC | 1 cut(s) | 952 |
| BstV1I | GCAGC | 5 cut(s) | 16, 256, 580, 1054, 1438 |
| BstX2I | RGATCY | 3 cut(s) | 766, 1554, 1636 |
| BstYI | RGATCY | 3 cut(s) | 766, 1554, 1636 |
| BstZ17I | GTATAC | 1 cut(s) | 1808 |
| BsuRI | GGCC | 3 cut(s) | 819, 1484, 1997 |
| BtgZI | GCGATG | 1 cut(s) | 711 |
| BtsCI | GGATG | 4 cut(s) | 73, 499, 1708, 2097 |
| BtsI | GCAGTG | 1 cut(s) | 1316 |
| BtsIMutI | CAGTG | 2 cut(s) | 614, 1316 |
| Cac8I | GCNNGC | 2 cut(s) | 1612, 1770 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1107 |
| CciI | TCATGA | 1 cut(s) | 475 |
| Cfr10I | RCCGGY | 1 cut(s) | 1180 |
| Csp6I | GTAC | 2 cut(s) | 336, 552 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 592, 627 |
| CviQI | GTAC | 2 cut(s) | 336, 552 |
| DdeI | CTNAG | 3 cut(s) | 33, 702, 1875 |
| DraI | TTTAAA | 1 cut(s) | 1518 |
| Eam1104I | CTCTTC | 3 cut(s) | 732, 1015, 1677 |
| EarI | CTCTTC | 3 cut(s) | 732, 1015, 1677 |
| Ecl136II | GAGCTC | 1 cut(s) | 1025 |
| Eco147I | AGGCCT | 1 cut(s) | 1997 |
| Eco24I | GRGCYC | 2 cut(s) | 9, 1027 |
| Eco31I | GGTCTC | 2 cut(s) | 1293, 1953 |
| Eco32I | GATATC | 2 cut(s) | 620, 871 |
| Eco53kI | GAGCTC | 1 cut(s) | 1025 |
| Eco57I | CTGAAG | 1 cut(s) | 1811 |
| EcoICRI | GAGCTC | 1 cut(s) | 1025 |
| EcoRV | GATATC | 2 cut(s) | 620, 871 |
| EcoT38I | GRGCYC | 2 cut(s) | 9, 1027 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1743, 1775, 1935, 1967 |
| FaqI | GGGAC | 2 cut(s) | 361, 366 |
| FauNDI | CATATG | 1 cut(s) | 193 |
| FbaI | TGATCA | 2 cut(s) | 1045, 1957 |
| FblI | GTMKAC | 3 cut(s) | 932, 1738, 1807 |
| Fnu4HI | GCNGC | 5 cut(s) | 30, 270, 594, 1068, 1452 |
| FokI | GGATG | 4 cut(s) | 80, 506, 1715, 2084 |
| FriOI | GRGCYC | 2 cut(s) | 9, 1027 |
| Fsp4HI | GCNGC | 5 cut(s) | 30, 270, 594, 1068, 1452 |
| FspBI | CTAG | 5 cut(s) | 726, 770, 1095, 1512, 1988 |
| GluI | GCNGC | 5 cut(s) | 30, 270, 594, 1068, 1452 |
| GsuI | CTGGAG | 1 cut(s) | 2178 |
| HaeIII | GGCC | 3 cut(s) | 819, 1484, 1997 |
| HapII | CCGG | 3 cut(s) | 488, 820, 1181 |
| HincII | GTYRAC | 1 cut(s) | 1885 |
| HindII | GTYRAC | 1 cut(s) | 1885 |
| HinfI | GANTC | 4 cut(s) | 212, 365, 689, 742 |
| HpaII | CCGG | 3 cut(s) | 488, 820, 1181 |
| HphI | GGTGA | 4 cut(s) | 167, 545, 1521, 2062 |
| Hpy166II | GTNNAC | 8 cut(s) | 499, 933, 950, 1356, 1405, 1739, 1808, 1885 |
| Hpy188I | TCNGA | 8 cut(s) | 187, 217, 624, 1158, 1372, 1830, 1920, 1957 |
| Hpy8I | GTNNAC | 8 cut(s) | 499, 933, 950, 1356, 1405, 1739, 1808, 1885 |
| Hpy99I | CGWCG | 1 cut(s) | 678 |
| HpyAV | CCTTC | 3 cut(s) | 420, 1417, 1937 |
| HpyCH4III | ACNGT | 4 cut(s) | 231, 609, 1304, 2183 |
| HpyCH4IV | ACGT | 1 cut(s) | 673 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 329, 599, 956, 1031, 1064, 1073, 1507 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 702, 1875 |
| HpySE526I | ACGT | 1 cut(s) | 673 |
| Kpn2I | TCCGGA | 1 cut(s) | 487 |
| Ksp22I | TGATCA | 2 cut(s) | 1045, 1957 |
| LguI | GCTCTTC | 1 cut(s) | 1015 |
| LmnI | GCTCC | 6 cut(s) | 167, 715, 904, 1030, 1137, 2135 |
| Lsp1109I | GCAGC | 5 cut(s) | 16, 256, 580, 1054, 1438 |
| LweI | GCATC | 4 cut(s) | 688, 799, 879, 2025 |
| MaeI | CTAG | 5 cut(s) | 726, 770, 1095, 1512, 1988 |
| MaeII | ACGT | 1 cut(s) | 673 |
| MaeIII | GTNAC | 5 cut(s) | 301, 371, 533, 2093, 2183 |
| MfeI | CAATTG | 1 cut(s) | 1071 |
| MflI | RGATCY | 3 cut(s) | 766, 1554, 1636 |
| MhlI | GDGCHC | 4 cut(s) | 9, 952, 1027, 2140 |
| MlyI | GAGTC | 1 cut(s) | 359 |
| MmeI | TCCRAC | 4 cut(s) | 178, 547, 693, 1327 |
| MroI | TCCGGA | 1 cut(s) | 487 |
| MslI | CAYNNNNRTG | 4 cut(s) | 147, 170, 474, 1646 |
| MspI | CCGG | 3 cut(s) | 488, 820, 1181 |
| MspR9I | CCNGG | 1 cut(s) | 821 |
| MunI | CAATTG | 1 cut(s) | 1071 |
| Mva1269I | GAATGC | 1 cut(s) | 559 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 329, 599, 956, 1031, 1064, 1073, 1507 |
| NciI | CCSGG | 1 cut(s) | 821 |
| NdeI | CATATG | 1 cut(s) | 193 |
| NlaIV | GGNNCC | 2 cut(s) | 1317, 1638 |
| NmuCI | GTSAC | 2 cut(s) | 533, 2093 |
| NspI | RCATGY | 3 cut(s) | 419, 1614, 1772 |
| PaeI | GCATGC | 2 cut(s) | 1614, 1772 |
| PagI | TCATGA | 1 cut(s) | 475 |
| PceI | AGGCCT | 1 cut(s) | 1997 |
| PciSI | GCTCTTC | 1 cut(s) | 1015 |
| PctI | GAATGC | 1 cut(s) | 559 |
| PfeI | GAWTC | 3 cut(s) | 212, 689, 742 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 197 |
| PkrI | GCNGC | 5 cut(s) | 31, 271, 595, 1069, 1453 |
| PleI | GAGTC | 1 cut(s) | 359 |
| PpsI | GAGTC | 1 cut(s) | 359 |
| PshBI | ATTAAT | 3 cut(s) | 168, 1380, 2031 |
| PsiI | TTATAA | 3 cut(s) | 51, 81, 111 |
| Psp124BI | GAGCTC | 1 cut(s) | 1027 |
| PspN4I | GGNNCC | 2 cut(s) | 1317, 1638 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1107 |
| PsuI | RGATCY | 3 cut(s) | 766, 1554, 1636 |
| RsaI | GTAC | 2 cut(s) | 337, 553 |
| RsaNI | GTAC | 2 cut(s) | 336, 552 |
| RseI | CAYNNNNRTG | 4 cut(s) | 147, 170, 474, 1646 |
| SacI | GAGCTC | 1 cut(s) | 1027 |
| SapI | GCTCTTC | 1 cut(s) | 1015 |
| SatI | GCNGC | 5 cut(s) | 30, 270, 594, 1068, 1452 |
| ScaI | AGTACT | 1 cut(s) | 553 |
| SchI | GAGTC | 1 cut(s) | 359 |
| ScrFI | CCNGG | 1 cut(s) | 821 |
| SduI | GDGCHC | 4 cut(s) | 9, 952, 1027, 2140 |
| SfaNI | GCATC | 4 cut(s) | 688, 799, 879, 2025 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 147, 170, 474, 1646 |
| SmlI | CTYRAG | 4 cut(s) | 787, 1455, 1565, 1999 |
| SmoI | CTYRAG | 4 cut(s) | 787, 1455, 1565, 1999 |
| SpeI | ACTAGT | 1 cut(s) | 725 |
| SphI | GCATGC | 2 cut(s) | 1614, 1772 |
| SseBI | AGGCCT | 1 cut(s) | 1997 |
| SspI | AATATT | 2 cut(s) | 547, 628 |
| SspMI | CTAG | 5 cut(s) | 726, 770, 1095, 1512, 1988 |
| SstI | GAGCTC | 1 cut(s) | 1027 |
| StuI | AGGCCT | 1 cut(s) | 1997 |
| StyD4I | CCNGG | 1 cut(s) | 819 |
| TaaI | ACNGT | 4 cut(s) | 231, 609, 1304, 2183 |
| TaiI | ACGT | 1 cut(s) | 676 |
| TaqI | TCGA | 4 cut(s) | 9, 292, 318, 974 |
| TatI | WGTACW | 2 cut(s) | 335, 551 |
| TfiI | GAWTC | 3 cut(s) | 212, 689, 742 |
| TscAI | CASTG | 2 cut(s) | 614, 1316 |
| TseFI | GTSAC | 2 cut(s) | 533, 2093 |
| TseI | GCWGC | 5 cut(s) | 29, 269, 593, 1067, 1451 |
| Tsp45I | GTSAC | 2 cut(s) | 533, 2093 |
| TspRI | CASTG | 2 cut(s) | 614, 1316 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 197 |
| VneI | GTGCAC | 1 cut(s) | 948 |
| VspI | ATTAAT | 3 cut(s) | 168, 1380, 2031 |
| XapI | RAATTY | 9 cut(s) | 22, 181, 206, 454, 655, 1171, 1602, 1789, 1893 |
| XbaI | TCTAGA | 1 cut(s) | 769 |
| XceI | RCATGY | 3 cut(s) | 419, 1614, 1772 |
| XmiI | GTMKAC | 3 cut(s) | 932, 1738, 1807 |
| XspI | CTAG | 5 cut(s) | 726, 770, 1095, 1512, 1988 |
| ZrmI | AGTACT | 1 cut(s) | 553 |