Protein FAR-RED IMPAIRED RESPONSE
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g28210 |
| rosa_laevigata | RLG00000035802 |
| rosa_multiflora | Rmu_sc0000685.1_g000014 Rmu_sc0001719.1_g000008 Rmu_sc0005507.1_g000039 Rmu_sc0006005.1_g000001 Rmu_sc0026606.1_g000001 |
| rosa_rugosa | Rorug01G0223400 Rorug03G0333200 Rorug03G0333500 |
| rosa_samantha | Rh1AG260800 Rh2BG067100 Rh2CG068400 Rh2CG538900 Rh2DG411000 Rh3AG272900 Rh5BG325800 Rh6BG198100 Rh7AG279400 Rh7CG298600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 59 |
| AcsI | RAATTY | 1 cut(s) | 217 |
| AfaI | GTAC | 2 cut(s) | 159, 195 |
| AgsI | TTSAA | 1 cut(s) | 78 |
| AluBI | AGCT | 1 cut(s) | 45 |
| AluI | AGCT | 1 cut(s) | 45 |
| Alw21I | GWGCWC | 2 cut(s) | 94, 241 |
| Alw44I | GTGCAC | 1 cut(s) | 237 |
| AlwI | GGATC | 1 cut(s) | 59 |
| ApaLI | GTGCAC | 1 cut(s) | 237 |
| ApoI | RAATTY | 1 cut(s) | 217 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BaeGI | GKGCMC | 1 cut(s) | 241 |
| Bbv12I | GWGCWC | 2 cut(s) | 94, 241 |
| BciVI | GTATCC | 1 cut(s) | 205 |
| BfuI | GTATCC | 1 cut(s) | 205 |
| BpmI | CTGGAG | 1 cut(s) | 132 |
| BseSI | GKGCMC | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 2 cut(s) | 94, 241 |
| Bsp1286I | GDGCHC | 2 cut(s) | 94, 241 |
| Bsp143I | GATC | 3 cut(s) | 64, 107, 128 |
| BspPI | GGATC | 1 cut(s) | 59 |
| BssMI | GATC | 3 cut(s) | 64, 107, 128 |
| BstC8I | GCNNGC | 1 cut(s) | 251 |
| BstKTI | GATC | 3 cut(s) | 67, 110, 131 |
| BstMBI | GATC | 3 cut(s) | 64, 107, 128 |
| BstSLI | GKGCMC | 1 cut(s) | 241 |
| BsuI | GTATCC | 1 cut(s) | 205 |
| Cac8I | GCNNGC | 1 cut(s) | 251 |
| Csp6I | GTAC | 2 cut(s) | 158, 194 |
| CviAII | CATG | 1 cut(s) | 197 |
| CviJI | RGCY | 1 cut(s) | 45 |
| CviKI_1 | RGCY | 1 cut(s) | 45 |
| CviQI | GTAC | 2 cut(s) | 158, 194 |
| DpnI | GATC | 3 cut(s) | 66, 109, 130 |
| DpnII | GATC | 3 cut(s) | 64, 107, 128 |
| FaeI | CATG | 1 cut(s) | 200 |
| FaiI | YATR | 2 cut(s) | 57, 198 |
| FatI | CATG | 1 cut(s) | 196 |
| GsuI | CTGGAG | 1 cut(s) | 132 |
| Hin1II | CATG | 1 cut(s) | 200 |
| HinfI | GANTC | 1 cut(s) | 114 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 239 |
| Hpy188III | TCNNGA | 4 cut(s) | 62, 111, 132, 152 |
| Hpy8I | GTNNAC | 1 cut(s) | 239 |
| HpyAV | CCTTC | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 2 cut(s) | 239, 253 |
| Hsp92II | CATG | 1 cut(s) | 200 |
| Kzo9I | GATC | 3 cut(s) | 64, 107, 128 |
| LmnI | GCTCC | 1 cut(s) | 89 |
| LpnPI | CCDG | 3 cut(s) | 96, 137, 257 |
| MaeIII | GTNAC | 2 cut(s) | 47, 119 |
| MalI | GATC | 3 cut(s) | 66, 109, 130 |
| MboI | GATC | 3 cut(s) | 64, 107, 128 |
| MboII | GAAGA | 1 cut(s) | 19 |
| MhlI | GDGCHC | 2 cut(s) | 94, 241 |
| MluCI | AATT | 1 cut(s) | 217 |
| MlyI | GAGTC | 1 cut(s) | 123 |
| MseI | TTAA | 1 cut(s) | 277 |
| NdeII | GATC | 3 cut(s) | 64, 107, 128 |
| NlaIII | CATG | 1 cut(s) | 200 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| PleI | GAGTC | 1 cut(s) | 122 |
| PpsI | GAGTC | 1 cut(s) | 122 |
| RsaI | GTAC | 2 cut(s) | 159, 195 |
| RsaNI | GTAC | 2 cut(s) | 158, 194 |
| SaqAI | TTAA | 1 cut(s) | 277 |
| Sau3AI | GATC | 3 cut(s) | 64, 107, 128 |
| SchI | GAGTC | 1 cut(s) | 123 |
| SduI | GDGCHC | 2 cut(s) | 94, 241 |
| SetI | ASST | 5 cut(s) | 47, 97, 163, 185, 195 |
| Sse9I | AATT | 1 cut(s) | 217 |
| TasI | AATT | 1 cut(s) | 217 |
| Tru1I | TTAA | 1 cut(s) | 277 |
| Tru9I | TTAA | 1 cut(s) | 277 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 3 cut(s) | 44, 213, 246 |
| VneI | GTGCAC | 1 cut(s) | 237 |
| XapI | RAATTY | 1 cut(s) | 217 |