Rorug04G0014800

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
2346005 .. 2354660
8656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0014800.1

Sequence Viewer

Length: 6270 bp
ATGGCAACCCTGTTACAGTCTGAGTCCAGACGCTTGTATTCTTGGTGGTGGGACAGTCACATTAGCCCAAAGAACTCAAAATGGCTTCAGGAAAATCTTACAGATATGGATGCTAAAGTCAAAGCAATGATCAAGCTCATTGAAGAAGATGCAGACTCTTTTGCAAGGAGAGCAGAAATGTACTACAAGAAACGCCCCGAGCTCATGAAACTGGTTGAGGAGTTCTATAGAGCTTATCGTGCATTGGCTGAGAGGTATGATCATGCAACTGTGGAGCTGCGCCAGGCTCATCGAACCATGGCAGAAGCATTTCCCAACCAAGTACCTTTTGAACTCGCTGATGAATCATCCTCAGGCTCTTATGGCCCAGAGGCTGGACCTCATACACCAGAAATGCTGCATCCAGTTCGTGCCTTATTTGACTCAGATGACTTGCATAAGGATGCACTGGGACTCTCTTCAACTGATTTACATGATTTGAAAAGGATTGGAGGCTCCGACTCTGGAATAAGCAAAAGAGGTCTGAAGCAGCTTAAGGAAATGTTCAATCCAGGAGAAGAGTTTAATCCAAAGGTTGCAGGGGGAAGGTTTACAGAAGGCTTAAGTTTTCATGAAGCAGATGAAAGCAAACCAAAGTTACAGAATGGGTACTCTCAGTTAACTAGTGAGAACCAGAGTCTCAAGAACCAGGTCCTCTCTCAATCTGAGCGTGCTGTAAAAGCTGAAACTGAAATCCAAATCCTACAGAAAACTTTATCTGAGATACAAGCTGAAAAAGATACAGTCCATCATCAGTACCAGCAGAGTTTGGAGAAGTTATCTAAGCTGGGGAAAGAACTGAATAATGCTCAAGAGGCTGCTGGAGGGCTCAATGAACGAGCCAGTAAAGCTGATATTGAAATTACAATACTGAAGGAAGCCCTTGGGGAATTAGAAGCTGAGAGAGATGCTGGTCTTCATCAGTACAATGGGTGTCTGGAAAGGATATCTAGCCTGGAGACCATGTTATCTTTTTCCCGGGAGGATGCAAAAGGACTTAATGAGCGAGCTGTTAAAGCAGAAACTGAAGCTCAAAATATGAAGCAAGAACTTTCTAAATTAGAGGCAGAAAAGGAAGCCTGTTTTCTCAAGTACAAGCAATGTCTTGAGAAGATATCTGCTCTGGAGGCTACGATCTCAGCTGATGAACAAAATGCCAGAATCCTTAATGAACAAATTGAAAGAGCTGAAAGTGAAGTTAAATCACTGAAGGAAGTTGTTGCTATACTGAAGGAAGAGAAAGAATCTGCATCTCTACAATTCAAGCAGTACATGGATACAATAGCTATGATGGAAAGAGAACTTTCTCAAGCTCAAGCGGATGCTGCAAGATTGAATGGTGAAATTTTGAGAGGGGCAGCAAAATTAAAGGGTGCCGAAGAACAATGTGTTCTCTTGGAGAGATCAAATCAGTCTCTGCGGTTAGAGGCAGATGGTCTGGTGAAGAGGATTGCAACAAAAGATGAAGAACTTTCAGACAAGAATGATGAGATGGAGAAACTTCATAATCTGATGCAAGAGGAGCACTTGCGGTTTGTGCAAGCTGAAGCCACTCTCCAATTTCTGCAGAAGTTGCATTCTCAATCCCAAGAAGAGCAGAAAGCTTTAGCCCTGGAGTTCAAAAACGGGCTTCAGATGTTGAAGGACTTGGAGATGAGCAAACATGGTGTGGAGGATGATATGCAACGGGTTAAGGGAGAAAATAAGAGCTTGAATGAACTGAACTTCTCTTGTACTATCTCCATTAAGAACCTGCAAGATGAAATCTTTAGCATGAAGGAGATGAAAGAGAAACTTGAAGAGGAGGTTAAGCTTAAAACAGACCAGAGCAATGCTCTCCAGAGGCAAATTTCCCATTTGGAGGATGAAATTAAGGGGTTGAATGGAAGATATCAGGCTATTGTGGAGCAAGTGGAGTCAGTAGGTTTAACTCCTGAATGCTTTGGATCATCTGTGAAAGACTTGCAAAATGAGAAGTCAAGGCTAGAAGATATATGCACAAGGGATAGAGAAGACAGAGAACATCTTTACGAGAAGTTGAAGGATATGGGTAAACTTTCAAAGGAGAATTCTGTTCTGGAGAGTTCACTTTCGGGTTTGAATGGGGAATTAGAGGGTTTGAGAGGGAAGGTCAAGGAATTGCAGGAGTCTTGCCACTTCCTCCAGGGAGAAAAAGCCACTCTTGTTGCTGAGAAATTTGCCCTGCTTTCCCAGTTGCAAATTATCACTCAGAACATGCACAAGCTTTTCGAGAAGAACTCATTGCTGGAAAGTTCCCTCTCCGGAGCAAACATTGAGCTCGAAAAGTTGAGGGCAAGAGCAAAGAGCTTAGAAGAGCTGTGCCAATTACTCAATAACGAGAAGTCCAATCTTCTTAATGAGAGAGGCATGCTGGTGTTTCAGTTAAATGATGTTGAGGAGAGACTGCGAAGCCTGGAAAAGAGGTTTAAAAAATTAGAGAAGAAGTACTCTAAAATGGAGAAGGAGAAAGAGTCCACACTTGATGCAGTAGAAGAATTACGGGGTTCCTTGCATGCAGAAAAACGAGAGCGTGCTGGTTATATTCGGTCAAGTGAATCCCGATTGGCAGGTTTGGAAAGCAATGTCCATCTCCTGCAGGAAGAAAGAAGGTTGGGAAAGAAAGAATTTGAAGCAGAACTTGACAAAGCTGTGAATGCCCAGATTGAGATCTTTATCCTTCAGAAGTTTATACAAGATCTGGAAGAGAAGAATTCGACAATATACATTGAATGTCAGAGACATGTTGAGGCTTCCAAGTTTTCTGATAAGCTGATCAAAGAGTTGGAGAGTGAAAATCTTGAGCTACAGGTGGAAGAAGAATTCTTAGTAGAAGAAATCGAAAAGTTGAGGCTGGGAATTTATCAAGTGTTCAGGTCTCTGCAAATTGAAACAGGTACACATGAAGATAAGATTGAGCGAGAAAAAGTACTTGTGCTGCACATTTTGAATGCTATCAAGGACTTGAAAAGTTCTCTGGTTCGGAGCAAGGATGAGGAGCAGCAGTTGCTGGTTGAGAATTCAGTGCTCTTTACTTTACTTCGGGAGCTGAGATCCGAAGGTGCAGAGATAGAGTCAGCAAAACAAACTTTGGAGCAGGAGTATGAGGTAATGGCAGACCATTGTGCTATGCTACAAAATGACAAGCATGAGCTTCTAGAGACGCAAAGGCAGTTGAGGTTGGAAGTGACTGAGAAAGAGCAAAAGGAGGAAATATTAGAGGCTGATTTGGAAAGTCTTCAAGGTAAGCTGGTGAGTCTGCAAGACGCATATCTGATTTTGCAGGAAGAACAATCCAAGGTGCTTGAAGAGAGGAGATCCTTGCTTAAGAAGCTTTTGGACCTGAAAGAGGAAAAGCAAGTCCTTGAAGAGGATAATAATGTTAATTTTCATGAAGCACTGGCTTTCAGCAACCTCTCTATGGTTTTAGAGAGTTTCACAATTGAGAAAGCTGTGGAACTAAAAGCACTTGCTGACGATCTTGATGGTCTTTGTGCTACTAACAATGACCTTAAAGATGCGGTTAGAACGTTGGGTGAGAAGTTAGTGATGAAAGAAGTAGAGAATCTACATCTGAATGAGATGGTTCAATTGTTGGACAAGGAACTGTGTGAAGCCAGTGACTTAAATGGTTTACTAAGCCATCAAATTTCAATTGGAAAGGATTCTCTCAAACAGAAAAACATGAAGCTCTCAGAGGTGGAAGAGAAGCTTCAAAAGACAGAGGACTTGAATGTGGAATTATGCAGAACTGTTGAGGAGCTGAAGATGGAATATGAAGAGTCAAAAATAATGGGTCAAAATTATGAGAAGCAGATTCTCCAACTATCTGAAGTCAGCACTATTCAGAAAAAGGAAATGAATAGCCTGCGTGAAGCAAATGAAACTCTGGAGGATGAAATCTTATGTAAAGCGATTGAAAAAGAAATAGAAACTCTGCACCTGAGTGAGACAGCCCAATTGTTGGACATGGAATTGTGTGAAGCCAAGGACTCAAATGATCAACTGAGCCATAGAATCTTAGTTGGAGAAGGTTGTCTGAAACAGAAAACTACGGAGCTTTCAGAAGCAGAAGAAAAGCTTAGACAGACAGAAGACTTGAATGTTGAACTATGCAGAAATGTTGAGGAACTGAAGGTGCAACATGAAGAATCAAAACTCATAAGAGAAAATTGTGAGAAGGAGATTGTGGAGCTATCCAAAGATAACACAAATCAGAAAATGGAAATTGAGAGCCTTCGTGAAGCAAATGGAACTCTAGAGATTGAAGTGGGTGTCTTGTGTGAAGCAATTGAAGAATACAAAATTAGAGAAGACTATATGAGTTCAGAGCTGCAAGAAAGAAGCAATGATTTTGAACTCTGGGAGGCTGAGGCTACAACATTCTACTTTGATCTTCACAATTCTGCTGTCCGTGAAGTTTTTCTTGAAGATAAGGTTCATGAGCTTACAGAAGTCTGTGAGAGAATTAAGGATGAAGATGCTGCAAAATTTGTGGAGATTGAACAAATGAAAGAAAGAGTTAGCATCTTGGAAAGTGAAGTTGGAGGTCTGACGGCCCAGTTGTCTGCATATGCTCCTGCCATAGCCTCTTTGAGAGAGAATGTAATTTCTCTTCAGCAAAATGCCCATCTTAGGAAGAAGCTTTTCGTGGAAAACAACCAGCAACACGAGGATGGCAAACTGCCAAATAATCTATATCAGAGGAGCTCTCAAGATTACAAAGAAGACCAAAGCACTTTGATATCAAATGGAATTTCCGAATTGGAAGAAATGCAGACTATGATCAAAGAAGTTGAAAAGGCAGTTATTGAAGAAACGGAAAGGCTTTCAATTGAATTAGTTGAAAAGGAAATGGTGGAAGAAATTGAAAGGCTTACAACAAAGGAAAGGGCAGAGGCCTTGGTACAGACTGAAGAAGTAAAATCAACAGGCAACTCGCATCAAGAAAATGGTAGCAAAGGAGAAGAGGTGGAACCTGTGAATGAGTACTCGGATGATAATCTGAAGTTGAGTAAACCTGAAAAGGCAGTTATTGAAGATACAGAAAGGCTTTCAATTGAATTAGTTGAAAAGGAAATGGTGGAACCTGTGAATGAGTACTCGGATGATAATCTGAAGTTGAGTAAACCTGAAAAGGCAGTTATTGAAGATACGGAAAGGCTTTCAATTGAATTAGTTGAAAAGGAAATGGTGGAAGAAATTGAAAGGCTTACAACAAAGGAAAGGGCAGAGGCCTTGGTACAGACTGAAGTAAAATCAACAGGTAACTCAAATCAAGAAAATGGTAGCAAAGGAAAAGAGGTGGAACCTGTGAATGAGTACTCGGATGATAATCTGAAGTTGAGTAAACCTGAAATAAGGCTTTTGACGAAAGACATTCCACTTGATCATGTTTCAGATTCTTCATTCTATGGAAGAAGCAGGAGAAAGAATGGTAGGGCTGATGATCAGATGCTCGAGTTATGGGAAGCAGCCGAGCAGCATTGCCTCCAGGATCCAGCAGCCAATATCAGGCAAGACCAGGCATCCTCACCAACTGAAGATGTTACCCCCTACCCTCGGTTTGCAAACTCACGGAGGACGACTCGAAAGTCTCCTTCAGAAGTTCAGGTTGAGAAGGAGTTGGGCATTGACAAGCTGGAGGTGTCCTACAGTATTCGACAACCAAGTCATGATGGCAAGAAGGAAAAGATCTTGGAGAGGCTTGCTTCTGATGCTCAGAAACTGATGTGTCTACAAACGTCTGTGCAAGACTTGCATAAGAAGGTGGAGACTAACAAGAAGGGTAAGAAGATCAACAGCTCTGAATACGAAACGGTGAAGAGACAGTTGCACGAAGTTGAGGATGCGGTTGTGCAGCTGGTGGATATTAATGATCAGTTGAAAAAGAATGTTGAAGAGTTTCCATCTTTGGACGAGCAGACTTCCATAGAGTTGGAGGAGGCTGGAAATGTCAGCAGAGAGAGAGTAACTGAACAAGCATGGAAAGGATCTGAGAAGATTGGAAGGTTGCAGTTTGAGTTGCAGAACATCCAACATGTTTTGGTGAAATGGGAGGGTGAAAAGAAAAGGAAAGGGAGGCATGGATTTTATGTGAGTAGAACAGGTCTTCTCCTGAGGGATTTTATTTACAGTGGCAGAAGTAGTAGTGAAAGGCGCAAGAAGGGTTGTTTGTGTGGTTGTATGAGACCATCAACGAGAGGAGAATAA

Protein Analysis

2089

Amino Acids

239.73

Weight (kDa)

4.95

Isoelectric Point (pI)

53.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 2.5e-38 KIP1-like protein
CCDC39 PF24161 213 - 454 5.3e-07 Coiled-coil domain-containing protein 39
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 5650, 5727
Acc36I ACCTGC 2 cut(s) 1800, 2618
AccB1I GGYRCC 1 cut(s) 1412
AccB7I CCANNNNNTGG 2 cut(s) 374, 4021
AccI GTMKAC 1 cut(s) 5794
AccIII TCCGGA 1 cut(s) 2321
AciI CCGC 5 cut(s) 1358, 1459, 1570, 3578, 5909
AclI AACGTT 1 cut(s) 3587
AclWI GGATC 6 cut(s) 1993, 3105, 3369, 5549, 5562, 6058
AfiI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5571, 5619
AflII CTTAAG 3 cut(s) 533, 601, 3383
AflIII ACRYGT 2 cut(s) 2800, 6097
AhlI ACTAGT 1 cut(s) 662
AjnI CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5550, 5580
AjuI GAANNNNNNNTTGG 2 cut(s) 4584, 4616
AleI CACNNNNGTG 1 cut(s) 4002
Alw21I GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
AlwI GGATC 6 cut(s) 1993, 3105, 3369, 5549, 5562, 6058
AlwNI CAGNNNCTG 5 cut(s) 374, 1064, 1456, 3067, 5785
Ama87I CYCGRG 3 cut(s) 197, 1017, 5516
Aor13HI TCCGGA 1 cut(s) 2321
AoxI GGCC 4 cut(s) 364, 4614, 4956, 5292
AseI ATTAAT 1 cut(s) 5931
Asp700I GAANNNNTTC 6 cut(s) 309, 3294, 3721, 4479, 4703, 5961
AspLEI GCGC 2 cut(s) 282, 6219
AspS9I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
AsuC2I CCSGG 2 cut(s) 1018, 1019
AsuHPI GGTGA 8 cut(s) 1391, 1492, 3322, 3605, 5583, 5890, 6118, 6131
AvaI CYCGRG 3 cut(s) 197, 1017, 5516
AvaII GGWCC 3 cut(s) 377, 691, 3397
AxyI CCTNAGG 2 cut(s) 352, 6176
BamHI GGATCC 1 cut(s) 5554
BanI GGYRCC 1 cut(s) 1412
BanII GRGCYC 4 cut(s) 204, 870, 2340, 4769
BarI GAAGNNNNNNTAC 2 cut(s) 4656, 4688
BauI CACGAG 1 cut(s) 4727
BbsI GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 6161
Bbv12I GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
BbvCI CCTCAGC 1 cut(s) 4428
BceAI ACGGC 1 cut(s) 4629
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5552, 5582
BciVI GTATCC 1 cut(s) 1309
BclI TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5446, 5506, 5935
BcnI CCSGG 2 cut(s) 1018, 1019
BcuI ACTAGT 1 cut(s) 662
BfaI CTAG 5 cut(s) 663, 990, 2024, 3215, 4316
BfmI CTRYAG 6 cut(s) 226, 743, 1604, 2654, 2864, 5710
BfrI CTTAAG 3 cut(s) 533, 601, 3383
BfuAI ACCTGC 2 cut(s) 1800, 2618
BfuI GTATCC 1 cut(s) 1309
BglII AGATCT 3 cut(s) 2727, 2755, 5751
BmcAI AGTACT 5 cut(s) 2507, 2988, 5048, 5159, 5381
Bme18I GGWCC 3 cut(s) 377, 691, 3397
BmeT110I CYCGRG 3 cut(s) 197, 1017, 5516
BmgT120I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
BmiI GGNNCC 7 cut(s) 496, 1414, 2566, 5034, 5145, 5367, 5556
BmrI ACTGGG 3 cut(s) 458, 2245, 4612
BmuI ACTGGG 3 cut(s) 458, 2245, 4612
BpiI GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 6161
BplI GAGNNNNNCTC 8 cut(s) 1858, 1890, 2282, 2314, 4753, 4785, 5629, 5661
Bpu10I CCTNAGC 1 cut(s) 4428
BpuEI CTTGAG 8 cut(s) 665, 834, 1112, 1166, 1332, 1338, 2879, 4755
BpuMI CCSGG 2 cut(s) 1018, 1019
BsaBI GATNNNNATC 5 cut(s) 2726, 2732, 5058, 5169, 5391
BsaI GGTCTC 3 cut(s) 992, 2940, 6241
BsaWI WCCGGW 1 cut(s) 2321
Bsc4I CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5571, 5619
Bse1I ACTGG 8 cut(s) 216, 404, 453, 882, 2251, 3462, 3675, 4618
Bse21I CCTNAGG 2 cut(s) 352, 6176
Bse3DI GCAATG 7 cut(s) 132, 1145, 1876, 2300, 2647, 4411, 5542
Bse8I GATNNNNATC 5 cut(s) 2726, 2732, 5058, 5169, 5391
BseAI TCCGGA 1 cut(s) 2321
BseBI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5552, 5582
BseJI GATNNNNATC 5 cut(s) 2726, 2732, 5058, 5169, 5391
BseLI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5571, 5619
BseMI GCAATG 7 cut(s) 132, 1145, 1876, 2300, 2647, 4411, 5542
BseNI ACTGG 8 cut(s) 216, 404, 453, 882, 2251, 3462, 3675, 4618
BseRI GAGGAG 9 cut(s) 233, 1574, 1856, 2471, 3068, 3385, 3830, 4777, 6014
BseYI CCCAGC 2 cut(s) 826, 2911
BsgI GTGCAG 4 cut(s) 2981, 3141, 3980, 5936
BshFI GGCC 4 cut(s) 366, 4616, 4958, 5294
BshNI GGYRCC 1 cut(s) 1412
BsiHKAI GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
BsiHKCI CYCGRG 3 cut(s) 197, 1017, 5516
BsiSI CCGG 2 cut(s) 1018, 2322
BslFI GGGAC 2 cut(s) 65, 465
BslI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5571, 5619
BsmBI CGTCTC 1 cut(s) 3212
BsmFI GGGAC 2 cut(s) 65, 465
BsmI GAATGC 4 cut(s) 1615, 1982, 2719, 3013
BsnI GGCC 4 cut(s) 366, 4616, 4958, 5294
Bso31I GGTCTC 3 cut(s) 992, 2940, 6241
BsoBI CYCGRG 3 cut(s) 197, 1017, 5516
Bsp1286I GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
Bsp13I TCCGGA 1 cut(s) 2321
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 5 cut(s) 1358, 1459, 1570, 3578, 5909
BspANI GGCC 4 cut(s) 366, 4616, 4958, 5294
BspEI TCCGGA 1 cut(s) 2321
BspHI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5731
BspLI GGNNCC 7 cut(s) 496, 1414, 2566, 5034, 5145, 5367, 5556
BspMAI CTGCAG 2 cut(s) 1608, 2658
BspMI ACCTGC 2 cut(s) 1800, 2618
BspPI GGATC 6 cut(s) 1993, 3105, 3369, 5549, 5562, 6058
BspQI GCTCTTC 2 cut(s) 1626, 2367
BspT107I GGYRCC 1 cut(s) 1412
BspTI CTTAAG 3 cut(s) 533, 601, 3383
BspTNI GGTCTC 3 cut(s) 992, 2940, 6241
BsrDI GCAATG 7 cut(s) 132, 1145, 1876, 2300, 2647, 4411, 5542
BsrI ACTGG 8 cut(s) 216, 404, 453, 882, 2251, 3462, 3675, 4618
BssSI CACGAG 1 cut(s) 4727
BssT1I CCWWGG 6 cut(s) 297, 922, 3354, 4044, 4959, 5295
Bst2BI CACGAG 1 cut(s) 4727
Bst2UI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5552, 5582
BstAFI CTTAAG 3 cut(s) 533, 601, 3383
BstAPI GCANNNNNTGC 3 cut(s) 1612, 3064, 5815
BstC8I GCNNGC 8 cut(s) 711, 1047, 1581, 2429, 2574, 2592, 3926, 5766
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 2 cut(s) 3404, 3425
BstHHI GCGC 2 cut(s) 282, 6219
BstNI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5552, 5582
BstNSI RCATGY 5 cut(s) 2278, 2431, 2576, 2804, 6101
BstSFI CTRYAG 6 cut(s) 226, 743, 1604, 2654, 2864, 5710
BstV2I GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 6161
BstX2I RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5554, 5751, 6050
BstXI CCANNNNNNTGG 1 cut(s) 5995
BstYI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5554, 5751, 6050
Bsu36I CCTNAGG 2 cut(s) 352, 6176
BsuI GTATCC 1 cut(s) 1309
BsuRI GGCC 4 cut(s) 366, 4616, 4958, 5294
BtgI CCRYGG 1 cut(s) 297
BtsIMutI CAGTG 6 cut(s) 446, 1244, 3087, 3455, 3682, 6199
BveI ACCTGC 2 cut(s) 1800, 2618
Cac8I GCNNGC 8 cut(s) 711, 1047, 1581, 2429, 2574, 2592, 3926, 5766
CaiI CAGNNNCTG 5 cut(s) 374, 1064, 1456, 3067, 5785
CciI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5731
CfoI GCGC 2 cut(s) 282, 6219
Cfr13I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
Cfr9I CCCGGG 1 cut(s) 1017
CseI GACGC 3 cut(s) 39, 3229, 3332
CsiI ACCWGGT 1 cut(s) 687
CspCI CAANNNNNGTGG 4 cut(s) 2206, 2241, 4533, 4568
DraI TTTAAA 1 cut(s) 2488
DrdI GACNNNNNNGTC 2 cut(s) 5650, 5727
DseDI GACNNNNNNGTC 2 cut(s) 5650, 5727
Ecl136II GAGCTC 3 cut(s) 202, 2338, 4767
Eco130I CCWWGG 6 cut(s) 297, 922, 3354, 4044, 4959, 5295
Eco147I AGGCCT 2 cut(s) 4958, 5294
Eco24I GRGCYC 4 cut(s) 204, 870, 2340, 4769
Eco31I GGTCTC 3 cut(s) 992, 2940, 6241
Eco32I GATATC 4 cut(s) 987, 1155, 1931, 4803
Eco47I GGWCC 3 cut(s) 377, 691, 3397
Eco53kI GAGCTC 3 cut(s) 202, 2338, 4767
Eco81I CCTNAGG 2 cut(s) 352, 6176
Eco88I CYCGRG 3 cut(s) 197, 1017, 5516
EcoICRI GAGCTC 3 cut(s) 202, 2338, 4767
EcoNI CCTNNNNNAGG 2 cut(s) 3404, 3425
EcoO109I RGGNCCY 1 cut(s) 691
EcoRI GAATTC 4 cut(s) 2107, 2770, 2879, 3076
EcoRII CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5550, 5580
EcoRV GATATC 4 cut(s) 987, 1155, 1931, 4803
EcoT14I CCWWGG 6 cut(s) 297, 922, 3354, 4044, 4959, 5295
EcoT38I GRGCYC 4 cut(s) 204, 870, 2340, 4769
ErhI CCWWGG 6 cut(s) 297, 922, 3354, 4044, 4959, 5295
Esp3I CGTCTC 1 cut(s) 3212
FaqI GGGAC 2 cut(s) 65, 465
FauNDI CATATG 1 cut(s) 4630
FbaI TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5446, 5506, 5935
FblI GTMKAC 1 cut(s) 5794
FriOI GRGCYC 4 cut(s) 204, 870, 2340, 4769
FspBI CTAG 5 cut(s) 663, 990, 2024, 3215, 4316
GlaI GCGC 2 cut(s) 281, 6218
GsaI CCCAGC 2 cut(s) 830, 2915
HaeIII GGCC 4 cut(s) 366, 4616, 4958, 5294
HapII CCGG 2 cut(s) 1018, 2322
HgaI GACGC 3 cut(s) 39, 3229, 3332
HhaI GCGC 2 cut(s) 282, 6219
Hin6I GCGC 2 cut(s) 280, 6217
HinP1I GCGC 2 cut(s) 280, 6217
HincII GTYRAC 1 cut(s) 660
HindII GTYRAC 1 cut(s) 660
HindIII AAGCTT 7 cut(s) 1641, 1850, 2282, 3389, 3767, 4136, 4700
HpaI GTTAAC 1 cut(s) 660
HpaII CCGG 2 cut(s) 1018, 2322
HphI GGTGA 8 cut(s) 1391, 1492, 3322, 3605, 5583, 5890, 6118, 6131
HpyCH4IV ACGT 2 cut(s) 3587, 5801
HpySE526I ACGT 2 cut(s) 3587, 5801
HspAI GCGC 2 cut(s) 280, 6217
Kpn2I TCCGGA 1 cut(s) 2321
Ksp22I TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5446, 5506, 5935
KspAI GTTAAC 1 cut(s) 660
LguI GCTCTTC 2 cut(s) 1626, 2367
MabI ACCWGGT 1 cut(s) 687
MaeI CTAG 5 cut(s) 663, 990, 2024, 3215, 4316
MaeII ACGT 2 cut(s) 3587, 5801
MaeIII GTNAC 8 cut(s) 12, 56, 636, 3244, 3677, 5324, 5605, 6028
MfeI CAATTG 8 cut(s) 3498, 3647, 3711, 4016, 4347, 4890, 5115, 5226
MflI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5554, 5751, 6050
MhlI GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
MroI TCCGGA 1 cut(s) 2321
MroXI GAANNNNTTC 6 cut(s) 309, 3294, 3721, 4479, 4703, 5961
MslI CAYNNNNRTG 5 cut(s) 441, 2432, 3633, 4002, 4731
MspA1I CMGCKG 2 cut(s) 1181, 5920
MspCI CTTAAG 3 cut(s) 533, 601, 3383
MspI CCGG 2 cut(s) 1018, 2322
MunI CAATTG 8 cut(s) 3498, 3647, 3711, 4016, 4347, 4890, 5115, 5226
Mva1269I GAATGC 4 cut(s) 1615, 1982, 2719, 3013
MvaI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5552, 5582
NciI CCSGG 2 cut(s) 1018, 1019
NcoI CCATGG 1 cut(s) 297
NdeI CATATG 1 cut(s) 4630
NlaIV GGNNCC 7 cut(s) 496, 1414, 2566, 5034, 5145, 5367, 5556
NmeAIII GCCGAG 1 cut(s) 5560
NmuCI GTSAC 3 cut(s) 56, 3244, 3677
NspI RCATGY 5 cut(s) 2278, 2431, 2576, 2804, 6101
OliI CACNNNNGTG 1 cut(s) 4002
PaeI GCATGC 2 cut(s) 2431, 2576
PaeR7I CTCGAG 1 cut(s) 5516
PagI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5731
PceI AGGCCT 2 cut(s) 4958, 5294
PciI ACATGT 2 cut(s) 2800, 6097
PciSI GCTCTTC 2 cut(s) 1626, 2367
PctI GAATGC 4 cut(s) 1615, 1982, 2719, 3013
PdmI GAANNNNTTC 6 cut(s) 309, 3294, 3721, 4479, 4703, 5961
PflMI CCANNNNNTGG 2 cut(s) 374, 4021
PfoI TCCNGGA 2 cut(s) 550, 5550
PpuMI RGGWCCY 1 cut(s) 691
PscI ACATGT 2 cut(s) 2800, 6097
PshBI ATTAAT 1 cut(s) 5931
Psp124BI GAGCTC 3 cut(s) 204, 2340, 4769
Psp1406I AACGTT 1 cut(s) 3587
Psp5II RGGWCCY 1 cut(s) 691
Psp6I CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5550, 5580
PspFI CCCAGC 2 cut(s) 826, 2911
PspGI CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5550, 5580
PspN4I GGNNCC 7 cut(s) 496, 1414, 2566, 5034, 5145, 5367, 5556
PspPI GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
PspPPI RGGWCCY 1 cut(s) 691
PspXI VCTCGAGB 1 cut(s) 5516
PstI CTGCAG 2 cut(s) 1608, 2658
PstNI CAGNNNCTG 5 cut(s) 374, 1064, 1456, 3067, 5785
PsuI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5554, 5751, 6050
PvuII CAGCTG 2 cut(s) 1181, 5920
RseI CAYNNNNRTG 5 cut(s) 441, 2432, 3633, 4002, 4731
SacI GAGCTC 3 cut(s) 204, 2340, 4769
SapI GCTCTTC 2 cut(s) 1626, 2367
Sau96I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
SbfI CCTGCAGG 1 cut(s) 2658
ScaI AGTACT 5 cut(s) 2507, 2988, 5048, 5159, 5381
SdaI CCTGCAGG 1 cut(s) 2658
SduI GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
SexAI ACCWGGT 1 cut(s) 687
SfcI CTRYAG 6 cut(s) 226, 743, 1604, 2654, 2864, 5710
Sfr274I CTCGAG 1 cut(s) 5516
SinI GGWCC 3 cut(s) 377, 691, 3397
SlaI CTCGAG 1 cut(s) 5516
SmaI CCCGGG 1 cut(s) 1019
SmiMI CAYNNNNRTG 5 cut(s) 441, 2432, 3633, 4002, 4731
SpeI ACTAGT 1 cut(s) 662
SphI GCATGC 2 cut(s) 2431, 2576
Sse8387I CCTGCAGG 1 cut(s) 2658
SseBI AGGCCT 2 cut(s) 4958, 5294
SsiI CCGC 5 cut(s) 1358, 1459, 1570, 3578, 5909
SspI AATATT 1 cut(s) 3273
SspMI CTAG 5 cut(s) 663, 990, 2024, 3215, 4316
SstI GAGCTC 3 cut(s) 204, 2340, 4769
StuI AGGCCT 2 cut(s) 4958, 5294
StyI CCWWGG 6 cut(s) 297, 922, 3354, 4044, 4959, 5295
TaiI ACGT 2 cut(s) 3590, 5804
TaqI TCGA 8 cut(s) 292, 2289, 2340, 2774, 2898, 5517, 5647, 5719
TaqII GACCGA 1 cut(s) 2595
TscAI CASTG 6 cut(s) 453, 1251, 3087, 3462, 3682, 6199
TseFI GTSAC 3 cut(s) 56, 3244, 3677
Tsp45I GTSAC 3 cut(s) 56, 3244, 3677
TspGWI ACGGA 5 cut(s) 4127, 4460, 4892, 5228, 5650
TspMI CCCGGG 1 cut(s) 1017
TspRI CASTG 6 cut(s) 453, 1251, 3087, 3462, 3682, 6199
Van91I CCANNNNNTGG 2 cut(s) 374, 4021
Vha464I CTTAAG 3 cut(s) 533, 601, 3383
VpaK11BI GGWCC 3 cut(s) 377, 691, 3397
VspI ATTAAT 1 cut(s) 5931
XagI CCTNNNNNAGG 2 cut(s) 3404, 3425
XbaI TCTAGA 2 cut(s) 3214, 4315
XceI RCATGY 5 cut(s) 2278, 2431, 2576, 2804, 6101
XhoI CTCGAG 1 cut(s) 5516
XmaI CCCGGG 1 cut(s) 1017
XmiI GTMKAC 1 cut(s) 5794
XmnI GAANNNNTTC 6 cut(s) 309, 3294, 3721, 4479, 4703, 5961
XspI CTAG 5 cut(s) 663, 990, 2024, 3215, 4316
ZrmI AGTACT 5 cut(s) 2507, 2988, 5048, 5159, 5381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.