pre-mRNA-splicing factor ISY1 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18790 |
| fragaria_vesca | FvH4_4g12620 FvH4_4g12620 |
| malus_domestica | MD12G1216200.v1.1 |
| prunus_persica | Prupe.6G322400_v2.0.a1 Prupe.7G048200_v2.0.a1 Prupe.7G048200_v2.0.a1 |
| pyrus_communis | pycom04g17830 pycom12g20170 |
| rosa_chinensis | RchiOBHm_Chr4g0411521 |
| rosa_laevigata | RLG00000002170 RLG00000008349 |
| rosa_multiflora | Rmu_co8341187.1_g000001 Rmu_sc0024225.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00238560 Rroxscaffold_5G00356090 |
| rosa_rugosa | Rorug04G0108200 Rorug04G0108300 Rorug04G0108400 |
| rosa_samantha | Rh4AG168700 Rh4BG165200 Rh4CG180000 Rh4DG163000 Rh7AG342900 Rh7CG360500 |
| rosa_wichuraiana | Rw0G020800 Rw4G014010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 282, 295 |
| AcuI | CTGAAG | 1 cut(s) | 297 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 297 |
| AgsI | TTSAA | 2 cut(s) | 175, 217 |
| AluBI | AGCT | 1 cut(s) | 252 |
| AluI | AGCT | 1 cut(s) | 252 |
| Alw21I | GWGCWC | 1 cut(s) | 121 |
| AlwI | GGATC | 2 cut(s) | 282, 295 |
| AspS9I | GGNCC | 1 cut(s) | 300 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 201 |
| AvaII | GGWCC | 1 cut(s) | 300 |
| BamHI | GGATCC | 1 cut(s) | 287 |
| BauI | CACGAG | 1 cut(s) | 308 |
| BbsI | GAAGAC | 1 cut(s) | 89 |
| Bbv12I | GWGCWC | 1 cut(s) | 121 |
| BfaI | CTAG | 3 cut(s) | 48, 141, 186 |
| Bme18I | GGWCC | 1 cut(s) | 300 |
| BmgT120I | GGNCC | 1 cut(s) | 300 |
| BmiI | GGNNCC | 2 cut(s) | 289, 302 |
| BmsI | GCATC | 1 cut(s) | 4 |
| BpiI | GAAGAC | 1 cut(s) | 89 |
| BpuEI | CTTGAG | 1 cut(s) | 72 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 297 |
| Bse1I | ACTGG | 1 cut(s) | 204 |
| BseGI | GGATG | 1 cut(s) | 19 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 297 |
| BseNI | ACTGG | 1 cut(s) | 204 |
| BsiHKAI | GWGCWC | 1 cut(s) | 121 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 297 |
| Bsp1286I | GDGCHC | 1 cut(s) | 121 |
| Bsp143I | GATC | 1 cut(s) | 287 |
| BspLI | GGNNCC | 2 cut(s) | 289, 302 |
| BspPI | GGATC | 2 cut(s) | 282, 295 |
| BsrI | ACTGG | 1 cut(s) | 204 |
| BssMI | GATC | 1 cut(s) | 287 |
| BssSI | CACGAG | 1 cut(s) | 308 |
| Bst2BI | CACGAG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 1 cut(s) | 179 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 19 |
| BstKTI | GATC | 1 cut(s) | 290 |
| BstMBI | GATC | 1 cut(s) | 287 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstNSI | RCATGY | 1 cut(s) | 125 |
| BstV2I | GAAGAC | 1 cut(s) | 89 |
| BstX2I | RGATCY | 1 cut(s) | 287 |
| BstYI | RGATCY | 1 cut(s) | 287 |
| BtsCI | GGATG | 1 cut(s) | 19 |
| Cfr13I | GGNCC | 1 cut(s) | 300 |
| CviAII | CATG | 2 cut(s) | 122, 292 |
| CviJI | RGCY | 3 cut(s) | 51, 245, 252 |
| CviKI_1 | RGCY | 3 cut(s) | 51, 245, 252 |
| DpnI | GATC | 1 cut(s) | 289 |
| DpnII | GATC | 1 cut(s) | 287 |
| Eco47I | GGWCC | 1 cut(s) | 300 |
| Eco57I | CTGAAG | 1 cut(s) | 297 |
| FaeI | CATG | 2 cut(s) | 125, 295 |
| FaiI | YATR | 2 cut(s) | 123, 293 |
| FatI | CATG | 2 cut(s) | 121, 291 |
| FokI | GGATG | 1 cut(s) | 26 |
| FspBI | CTAG | 3 cut(s) | 48, 141, 186 |
| Hin1II | CATG | 2 cut(s) | 125, 295 |
| HincII | GTYRAC | 1 cut(s) | 265 |
| HindII | GTYRAC | 1 cut(s) | 265 |
| HindIII | AAGCTT | 1 cut(s) | 250 |
| HinfI | GANTC | 3 cut(s) | 85, 206, 295 |
| HpaI | GTTAAC | 1 cut(s) | 265 |
| HphI | GGTGA | 2 cut(s) | 107, 201 |
| Hpy166II | GTNNAC | 2 cut(s) | 28, 265 |
| Hpy188I | TCNGA | 1 cut(s) | 300 |
| Hpy188III | TCNNGA | 1 cut(s) | 270 |
| Hpy8I | GTNNAC | 2 cut(s) | 28, 265 |
| HpyAV | CCTTC | 2 cut(s) | 13, 150 |
| HpyCH4III | ACNGT | 1 cut(s) | 179 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 125, 295 |
| KspAI | GTTAAC | 1 cut(s) | 265 |
| Kzo9I | GATC | 1 cut(s) | 287 |
| LmnI | GCTCC | 2 cut(s) | 5, 116 |
| LpnPI | CCDG | 3 cut(s) | 185, 231, 255 |
| LweI | GCATC | 1 cut(s) | 4 |
| MaeI | CTAG | 3 cut(s) | 48, 141, 186 |
| MaeIII | GTNAC | 2 cut(s) | 195, 207 |
| MalI | GATC | 1 cut(s) | 289 |
| MboI | GATC | 1 cut(s) | 287 |
| MboII | GAAGA | 7 cut(s) | 70, 73, 94, 129, 229, 241, 244 |
| MflI | RGATCY | 1 cut(s) | 287 |
| MhlI | GDGCHC | 1 cut(s) | 121 |
| MlyI | GAGTC | 3 cut(s) | 79, 215, 289 |
| MnlI | CCTC | 2 cut(s) | 86, 143 |
| MseI | TTAA | 2 cut(s) | 32, 264 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 1 cut(s) | 287 |
| NlaIII | CATG | 2 cut(s) | 125, 295 |
| NlaIV | GGNNCC | 2 cut(s) | 289, 302 |
| NmuCI | GTSAC | 1 cut(s) | 207 |
| NspI | RCATGY | 1 cut(s) | 125 |
| PleI | GAGTC | 3 cut(s) | 79, 214, 289 |
| PpsI | GAGTC | 3 cut(s) | 79, 214, 289 |
| PspN4I | GGNNCC | 2 cut(s) | 289, 302 |
| PspPI | GGNCC | 1 cut(s) | 300 |
| PsuI | RGATCY | 1 cut(s) | 287 |
| SaqAI | TTAA | 2 cut(s) | 32, 264 |
| Sau3AI | GATC | 1 cut(s) | 287 |
| Sau96I | GGNCC | 1 cut(s) | 300 |
| SchI | GAGTC | 3 cut(s) | 79, 215, 289 |
| SduI | GDGCHC | 1 cut(s) | 121 |
| SetI | ASST | 6 cut(s) | 49, 79, 97, 166, 214, 254 |
| SfaNI | GCATC | 1 cut(s) | 4 |
| SinI | GGWCC | 1 cut(s) | 300 |
| SmlI | CTYRAG | 1 cut(s) | 87 |
| SmoI | CTYRAG | 1 cut(s) | 87 |
| SspMI | CTAG | 3 cut(s) | 48, 141, 186 |
| TaaI | ACNGT | 1 cut(s) | 179 |
| Tru1I | TTAA | 2 cut(s) | 32, 264 |
| Tru9I | TTAA | 2 cut(s) | 32, 264 |
| TseFI | GTSAC | 1 cut(s) | 207 |
| Tsp45I | GTSAC | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 300 |
| XceI | RCATGY | 1 cut(s) | 125 |
| XspI | CTAG | 3 cut(s) | 48, 141, 186 |