Ribonucleoside-diphosphate reductase small chain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23580 |
| fragaria_vesca | FvH4_4g14370 FvH4_4g14370 |
| malus_domestica | MD13G1182000.v1.1 MD16G1182500.v1.1 |
| prunus_persica | Prupe.1G149900_v2.0.a1 Prupe.1G149900_v2.0.a1 |
| pyrus_communis | pycom13g15710 pycom16g15320 |
| rosa_chinensis | RchiOBHm_Chr4g0418551 |
| rosa_laevigata | RLG00000007854 |
| rosa_multiflora | Rmu_sc0000363.1_g000039 |
| rosa_roxburghii | Rroxscaffold_5G00361810 |
| rosa_rugosa | Rorug04G0154200 Rorug04G0154300 |
| rosa_samantha | Rh4AG215800 Rh4BG214900 Rh4CG227400 Rh4DG214100 |
| rosa_wichuraiana | Rw4G018260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 391 |
| Acc36I | ACCTGC | 1 cut(s) | 391 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 36 |
| AccI | GTMKAC | 1 cut(s) | 447 |
| AccII | CGCG | 2 cut(s) | 66, 68 |
| AciI | CCGC | 3 cut(s) | 156, 204, 859 |
| AclWI | GGATC | 1 cut(s) | 552 |
| AcsI | RAATTY | 4 cut(s) | 60, 326, 699, 1043 |
| AcuI | CTGAAG | 1 cut(s) | 453 |
| AcyI | GRCGYC | 2 cut(s) | 201, 603 |
| AfaI | GTAC | 2 cut(s) | 335, 716 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 36, 188, 490, 541, 767, 868, 976, 1022 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1074 |
| AjnI | CCWGG | 2 cut(s) | 187, 760 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 4 cut(s) | 223, 271, 639, 735 |
| AluI | AGCT | 4 cut(s) | 223, 271, 639, 735 |
| Alw21I | GWGCWC | 2 cut(s) | 481, 846 |
| Alw26I | GTCTC | 4 cut(s) | 241, 338, 578, 1061 |
| Alw44I | GTGCAC | 1 cut(s) | 842 |
| AlwI | GGATC | 1 cut(s) | 552 |
| ApaLI | GTGCAC | 1 cut(s) | 842 |
| ApoI | RAATTY | 4 cut(s) | 60, 326, 699, 1043 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 981, 1013 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 53, 957, 1043 |
| AspLEI | GCGC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 770 |
| AsuC2I | CCSGG | 1 cut(s) | 650 |
| AsuHPI | GGTGA | 2 cut(s) | 132, 629 |
| AvaII | GGWCC | 1 cut(s) | 770 |
| AxyI | CCTNAGG | 2 cut(s) | 489, 909 |
| BaeGI | GKGCMC | 1 cut(s) | 846 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 825, 858 |
| BbsI | GAAGAC | 1 cut(s) | 420 |
| Bbv12I | GWGCWC | 2 cut(s) | 481, 846 |
| BccI | CCATC | 4 cut(s) | 38, 713, 772, 1060 |
| BceAI | ACGGC | 2 cut(s) | 191, 491 |
| BciT130I | CCWGG | 2 cut(s) | 189, 762 |
| BciVI | GTATCC | 1 cut(s) | 526 |
| BcnI | CCSGG | 1 cut(s) | 650 |
| BcoDI | GTCTC | 4 cut(s) | 241, 338, 578, 1061 |
| BfaI | CTAG | 2 cut(s) | 675, 732 |
| BfmI | CTRYAG | 3 cut(s) | 279, 444, 1030 |
| BfuAI | ACCTGC | 1 cut(s) | 391 |
| BfuI | GTATCC | 1 cut(s) | 526 |
| BisI | GCNGC | 2 cut(s) | 156, 204 |
| BlsI | GCNGC | 2 cut(s) | 157, 205 |
| Bme1390I | CCNGG | 3 cut(s) | 189, 650, 762 |
| Bme18I | GGWCC | 1 cut(s) | 770 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1074 |
| BmgT120I | GGNCC | 1 cut(s) | 770 |
| BmiI | GGNNCC | 2 cut(s) | 196, 960 |
| BmrFI | CCNGG | 3 cut(s) | 189, 650, 762 |
| BmrI | ACTGGG | 1 cut(s) | 400 |
| BmsI | GCATC | 1 cut(s) | 427 |
| BmuI | ACTGGG | 1 cut(s) | 400 |
| BpiI | GAAGAC | 1 cut(s) | 420 |
| BpuEI | CTTGAG | 1 cut(s) | 1057 |
| BpuMI | CCSGG | 1 cut(s) | 650 |
| BsaHI | GRCGYC | 2 cut(s) | 201, 603 |
| BsaI | GGTCTC | 1 cut(s) | 1061 |
| BsaJI | CCNNGG | 3 cut(s) | 187, 406, 862 |
| BsaWI | WCCGGW | 1 cut(s) | 846 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 291, 321 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 36, 188, 490, 541, 767, 868, 976, 1022 |
| Bse1I | ACTGG | 1 cut(s) | 395 |
| Bse21I | CCTNAGG | 2 cut(s) | 489, 909 |
| Bse3DI | GCAATG | 1 cut(s) | 926 |
| BseBI | CCWGG | 2 cut(s) | 189, 762 |
| BseDI | CCNNGG | 3 cut(s) | 187, 406, 862 |
| BseGI | GGATG | 2 cut(s) | 30, 135 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 36, 188, 490, 541, 767, 868, 976, 1022 |
| BseMI | GCAATG | 1 cut(s) | 926 |
| BseMII | CTCAG | 3 cut(s) | 177, 900, 1024 |
| BseNI | ACTGG | 1 cut(s) | 395 |
| BseRI | GAGGAG | 3 cut(s) | 70, 253, 740 |
| BseSI | GKGCMC | 1 cut(s) | 846 |
| BseYI | CCCAGC | 1 cut(s) | 867 |
| Bsh1236I | CGCG | 2 cut(s) | 66, 68 |
| BsiHKAI | GWGCWC | 2 cut(s) | 481, 846 |
| BsiSI | CCGG | 4 cut(s) | 218, 471, 650, 847 |
| BslFI | GGGAC | 1 cut(s) | 821 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 36, 188, 490, 541, 767, 868, 976, 1022 |
| BsmAI | GTCTC | 4 cut(s) | 241, 338, 578, 1061 |
| BsmBI | CGTCTC | 1 cut(s) | 578 |
| BsmFI | GGGAC | 1 cut(s) | 821 |
| BsmI | GAATGC | 1 cut(s) | 1058 |
| Bso31I | GGTCTC | 1 cut(s) | 1061 |
| Bsp1286I | GDGCHC | 2 cut(s) | 481, 846 |
| Bsp143I | GATC | 1 cut(s) | 544 |
| BspACI | CCGC | 3 cut(s) | 156, 204, 859 |
| BspCNI | CTCAG | 3 cut(s) | 176, 901, 1023 |
| BspFNI | CGCG | 2 cut(s) | 66, 68 |
| BspLI | GGNNCC | 2 cut(s) | 196, 960 |
| BspMAI | CTGCAG | 1 cut(s) | 1034 |
| BspMI | ACCTGC | 1 cut(s) | 391 |
| BspPI | GGATC | 1 cut(s) | 552 |
| BspTNI | GGTCTC | 1 cut(s) | 1061 |
| BsrDI | GCAATG | 1 cut(s) | 926 |
| BsrI | ACTGG | 1 cut(s) | 395 |
| BssECI | CCNNGG | 3 cut(s) | 187, 406, 862 |
| BssMI | GATC | 1 cut(s) | 544 |
| BssNI | GRCGYC | 2 cut(s) | 201, 603 |
| BssT1I | CCWWGG | 2 cut(s) | 406, 862 |
| Bst2UI | CCWGG | 2 cut(s) | 189, 762 |
| Bst4CI | ACNGT | 4 cut(s) | 280, 452, 528, 997 |
| BstACI | GRCGYC | 2 cut(s) | 201, 603 |
| BstC8I | GCNNGC | 1 cut(s) | 883 |
| BstDEI | CTNAG | 5 cut(s) | 163, 489, 774, 909, 1010 |
| BstF5I | GGATG | 2 cut(s) | 30, 135 |
| BstFNI | CGCG | 2 cut(s) | 66, 68 |
| BstHHI | GCGC | 1 cut(s) | 68 |
| BstKTI | GATC | 1 cut(s) | 547 |
| BstMAI | GTCTC | 4 cut(s) | 241, 338, 578, 1061 |
| BstMBI | GATC | 1 cut(s) | 544 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 74, 476, 937 |
| BstNI | CCWGG | 2 cut(s) | 189, 762 |
| BstSCI | CCNGG | 3 cut(s) | 187, 648, 760 |
| BstSFI | CTRYAG | 3 cut(s) | 279, 444, 1030 |
| BstSLI | GKGCMC | 1 cut(s) | 846 |
| BstUI | CGCG | 2 cut(s) | 66, 68 |
| BstV2I | GAAGAC | 1 cut(s) | 420 |
| Bsu36I | CCTNAGG | 2 cut(s) | 489, 909 |
| BsuI | GTATCC | 1 cut(s) | 526 |
| BtsCI | GGATG | 2 cut(s) | 30, 135 |
| BtsI | GCAGTG | 1 cut(s) | 1039 |
| BtsIMutI | CAGTG | 1 cut(s) | 1039 |
| BveI | ACCTGC | 1 cut(s) | 391 |
| Cac8I | GCNNGC | 1 cut(s) | 883 |
| CfoI | GCGC | 1 cut(s) | 68 |
| Cfr13I | GGNCC | 1 cut(s) | 770 |
| CseI | GACGC | 3 cut(s) | 209, 560, 611 |
| Csp6I | GTAC | 2 cut(s) | 334, 715 |
| CviAII | CATG | 3 cut(s) | 6, 557, 839 |
| CviQI | GTAC | 2 cut(s) | 334, 715 |
| DdeI | CTNAG | 5 cut(s) | 163, 489, 774, 909, 1010 |
| DpnI | GATC | 1 cut(s) | 546 |
| DpnII | GATC | 1 cut(s) | 544 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1074 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1074 |
| Eco130I | CCWWGG | 2 cut(s) | 406, 862 |
| Eco31I | GGTCTC | 1 cut(s) | 1061 |
| Eco47I | GGWCC | 1 cut(s) | 770 |
| Eco57I | CTGAAG | 1 cut(s) | 453 |
| Eco81I | CCTNAGG | 2 cut(s) | 489, 909 |
| EcoO109I | RGGNCCY | 1 cut(s) | 770 |
| EcoRI | GAATTC | 1 cut(s) | 1043 |
| EcoRII | CCWGG | 2 cut(s) | 187, 760 |
| EcoT14I | CCWWGG | 2 cut(s) | 406, 862 |
| ErhI | CCWWGG | 2 cut(s) | 406, 862 |
| Esp3I | CGTCTC | 1 cut(s) | 578 |
| FaeI | CATG | 3 cut(s) | 9, 560, 842 |
| FaiI | YATR | 9 cut(s) | 7, 371, 455, 558, 663, 728, 794, 840, 965 |
| FaqI | GGGAC | 1 cut(s) | 821 |
| FatI | CATG | 3 cut(s) | 5, 556, 838 |
| FblI | GTMKAC | 1 cut(s) | 447 |
| Fnu4HI | GCNGC | 2 cut(s) | 156, 204 |
| FokI | GGATG | 2 cut(s) | 17, 142 |
| Fsp4HI | GCNGC | 2 cut(s) | 156, 204 |
| FspBI | CTAG | 2 cut(s) | 675, 732 |
| GlaI | GCGC | 1 cut(s) | 67 |
| GluI | GCNGC | 2 cut(s) | 156, 204 |
| GsaI | CCCAGC | 1 cut(s) | 871 |
| HapII | CCGG | 4 cut(s) | 218, 471, 650, 847 |
| HgaI | GACGC | 3 cut(s) | 209, 560, 611 |
| HhaI | GCGC | 1 cut(s) | 68 |
| Hin1I | GRCGYC | 2 cut(s) | 201, 603 |
| Hin1II | CATG | 3 cut(s) | 9, 560, 842 |
| Hin6I | GCGC | 1 cut(s) | 66 |
| HinP1I | GCGC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 637 |
| HinfI | GANTC | 3 cut(s) | 412, 501, 1026 |
| HpaII | CCGG | 4 cut(s) | 218, 471, 650, 847 |
| HphI | GGTGA | 2 cut(s) | 132, 629 |
| Hpy166II | GTNNAC | 2 cut(s) | 448, 844 |
| Hpy188I | TCNGA | 4 cut(s) | 166, 199, 433, 1013 |
| Hpy8I | GTNNAC | 2 cut(s) | 448, 844 |
| Hpy99I | CGWCG | 1 cut(s) | 203 |
| HpyAV | CCTTC | 2 cut(s) | 535, 587 |
| HpyCH4III | ACNGT | 4 cut(s) | 280, 452, 528, 997 |
| HpyCH4V | TGCA | 8 cut(s) | 440, 695, 844, 855, 931, 1002, 1032, 1058 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 74, 476, 937 |
| HpyF3I | CTNAG | 5 cut(s) | 163, 489, 774, 909, 1010 |
| Hsp92I | GRCGYC | 2 cut(s) | 201, 603 |
| Hsp92II | CATG | 3 cut(s) | 9, 560, 842 |
| HspAI | GCGC | 1 cut(s) | 66 |
| Kzo9I | GATC | 1 cut(s) | 544 |
| LmnI | GCTCC | 4 cut(s) | 200, 220, 262, 560 |
| LweI | GCATC | 1 cut(s) | 427 |
| MaeI | CTAG | 2 cut(s) | 675, 732 |
| MaeIII | GTNAC | 2 cut(s) | 550, 677 |
| MalI | GATC | 1 cut(s) | 546 |
| MboI | GATC | 1 cut(s) | 544 |
| MboII | GAAGA | 9 cut(s) | 94, 132, 335, 345, 420, 446, 510, 697, 962 |
| MfeI | CAATTG | 2 cut(s) | 363, 932 |
| MhlI | GDGCHC | 2 cut(s) | 481, 846 |
| MlyI | GAGTC | 1 cut(s) | 1035 |
| MmeI | TCCRAC | 1 cut(s) | 222 |
| MroXI | GAANNNNTTC | 3 cut(s) | 53, 957, 1043 |
| MseI | TTAA | 2 cut(s) | 633, 1120 |
| MspI | CCGG | 4 cut(s) | 218, 471, 650, 847 |
| MspR9I | CCNGG | 3 cut(s) | 189, 650, 762 |
| MunI | CAATTG | 2 cut(s) | 363, 932 |
| Mva1269I | GAATGC | 1 cut(s) | 1058 |
| MvaI | CCWGG | 2 cut(s) | 189, 762 |
| MvnI | CGCG | 2 cut(s) | 66, 68 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 74, 476, 937 |
| NciI | CCSGG | 1 cut(s) | 650 |
| NdeII | GATC | 1 cut(s) | 544 |
| NlaIII | CATG | 3 cut(s) | 9, 560, 842 |
| NlaIV | GGNNCC | 2 cut(s) | 196, 960 |
| PaqCI | CACCTGC | 1 cut(s) | 391 |
| PctI | GAATGC | 1 cut(s) | 1058 |
| PdmI | GAANNNNTTC | 3 cut(s) | 53, 957, 1043 |
| PfeI | GAWTC | 2 cut(s) | 412, 501 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 36 |
| PfoI | TCCNGGA | 1 cut(s) | 760 |
| PkrI | GCNGC | 2 cut(s) | 157, 205 |
| PleI | GAGTC | 1 cut(s) | 1034 |
| PpsI | GAGTC | 1 cut(s) | 1034 |
| PpuMI | RGGWCCY | 1 cut(s) | 770 |
| Psp5II | RGGWCCY | 1 cut(s) | 770 |
| Psp6I | CCWGG | 2 cut(s) | 187, 760 |
| PspFI | CCCAGC | 1 cut(s) | 867 |
| PspGI | CCWGG | 2 cut(s) | 187, 760 |
| PspN4I | GGNNCC | 2 cut(s) | 196, 960 |
| PspPI | GGNCC | 1 cut(s) | 770 |
| PspPPI | RGGWCCY | 1 cut(s) | 770 |
| PstI | CTGCAG | 1 cut(s) | 1034 |
| RsaI | GTAC | 2 cut(s) | 335, 716 |
| RsaNI | GTAC | 2 cut(s) | 334, 715 |
| SaqAI | TTAA | 2 cut(s) | 633, 1120 |
| SatI | GCNGC | 2 cut(s) | 156, 204 |
| Sau3AI | GATC | 1 cut(s) | 544 |
| Sau96I | GGNCC | 1 cut(s) | 770 |
| SchI | GAGTC | 1 cut(s) | 1035 |
| ScrFI | CCNGG | 3 cut(s) | 189, 650, 762 |
| SduI | GDGCHC | 2 cut(s) | 481, 846 |
| SfaNI | GCATC | 1 cut(s) | 427 |
| SfcI | CTRYAG | 3 cut(s) | 279, 444, 1030 |
| SinI | GGWCC | 1 cut(s) | 770 |
| SmlI | CTYRAG | 1 cut(s) | 1072 |
| SmoI | CTYRAG | 1 cut(s) | 1072 |
| SsiI | CCGC | 3 cut(s) | 156, 204, 859 |
| SspMI | CTAG | 2 cut(s) | 675, 732 |
| StyD4I | CCNGG | 3 cut(s) | 187, 648, 760 |
| StyI | CCWWGG | 2 cut(s) | 406, 862 |
| TaaI | ACNGT | 4 cut(s) | 280, 452, 528, 997 |
| TaqI | TCGA | 2 cut(s) | 47, 1106 |
| TauI | GCSGC | 2 cut(s) | 158, 206 |
| TfiI | GAWTC | 2 cut(s) | 412, 501 |
| Tru1I | TTAA | 2 cut(s) | 633, 1120 |
| Tru9I | TTAA | 2 cut(s) | 633, 1120 |
| TscAI | CASTG | 1 cut(s) | 1039 |
| TspDTI | ATGAA | 4 cut(s) | 339, 636, 809, 1056 |
| TspGWI | ACGGA | 1 cut(s) | 275 |
| TspRI | CASTG | 1 cut(s) | 1039 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 36 |
| VneI | GTGCAC | 1 cut(s) | 842 |
| VpaK11BI | GGWCC | 1 cut(s) | 770 |
| XapI | RAATTY | 4 cut(s) | 60, 326, 699, 1043 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 387, 951 |
| XmiI | GTMKAC | 1 cut(s) | 447 |
| XmnI | GAANNNNTTC | 3 cut(s) | 53, 957, 1043 |
| XspI | CTAG | 2 cut(s) | 675, 732 |