Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007654

Physical Location & Seq

Genomic Coordinates Forward (+)

48769036 .. 48773547

Gene Structure 4512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0311800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3360 bp

ATGATGCCGCCGGAGCTGCAGCCGCGGTTGTTCCGTCCGTACATCTCAACGGCGGCGAGCGCTTCTTCTTCTCTCTTCAGCAATGGTTCCCCGAACCCTAGCCCCACCGACTCCCGCTTCAGCAACGGCGCTGCTGCTTCTAGATCTCTCAAGAACTCGCGATTCACGGCCGCCGCCTTCGCGCACAACGCCAGAATGGCCGTCGCGCTCGTCCCCTGCGCCGCCTTCCTCCTCGATCTCGGCGGCACTCCGGTCGTCGCGACCCTAACCCTAGGCCTGATGATCTCCTACATCATCGACGCCCTCAACTTCAAGTCCGGTGCCTTCTTCGGCGTCTGGTTCTCCCTCGTCTTCTCTCAGATCGCCTTCTTCTTCAGCTCGTCGCTGTTGACCTCCTTCAATTCGTGGATTCTCGCCGGCCTCGCCGCCTTCCTCTGCGCCGAGACCAATTTCTTGATCGGCGTCTGGGTCTCCCTCCAGTTCAAGTGGATTCAAATCGAGAATCCTTCAATTGTGCTCGCCCTCGAGCGCCTCCTCTTCGCCTGTGTCCCCTTCGCCGCCTCCTCACTCTTCACTTGGGCCACCATCTCCGCCGTCGGTATGAGCAATGCTTCTTACTACCTCATGGCCTTCAGCTGCGTTTTCTATTGGCTCTACTCCATCCCTCGCATTTCGTCTTTCAAGACCAAGCAGGATTCCAAGTACCACGGCGGCGAGGTTCCCGATGAGAATTTGATACTCAGCCCCCTCGAGAGTTGCATCCACACTCTGTATCTGCTGTTCTTCCCGCTACTCTTCCACATTGCCTCTCACTACTCCATCATGTTCTCTTCCGCCGCCGCGGTTTCCGATTTGTTCCTGCTCTTCTTCATTCCTTTCCTGTTCCAGCTCCTGGCCTCTACCAGGGGAGCCCTCTGGTGGGTCACGAAGAATCCGAACCAGCTGCGAGGAATTCAAGTCATGAATGGCGCCGTTGCTTTGGTTGTTGTTGTAATCTGTTTGGAGATTAGAGTCGTTTTCCATTCATTTGGGCGGTACATTCAGGTGCCTCCGCCTTTGAATTACCTTTTGGTGACTACTACAATGCTTGGAGGTGCAGCTGGAGCTGGTGCCTATGCGCTGGGTATGATATCTGATGCCTTCAGCTCCCTGGCTTTCACTGCTCTGGCTGTTGTAGTTAGTGCTGCTGGAGCTATTGTTGTCGGATTTCCTGTTTTGTTCCTTCCACTGCCTTCAGTTGCTGGCTTCTATTTGGCTCGCTTTTTTACAAAGAAGAGTGTTCCATCCTACTTTGCTTTTGTTGTGCTTGGGAGCCTGATGGTTACATGGTTTGTAATGCACAATTTCTGGGATCTAAATATTTGGATGGCAGGCATGTCCCTGAAATCCTTCTGCAAACTTGTTATTTTGAATGTTGTCTTGGCCTTGACTATTCCTGGTCTAGCTCTACTTCCTTCGAAGCTCCACTTTTTGACAGAGATTGGTTTAGTCACTCATGCATTGCTTTTATCTCACATTGAGAACCGATTTTTTAATTACTCTGGGATATATTATTATGGATTTGAGGATGATGTAATGTATCCAAGCTACATGGTTCTCGTGACAACATTTGTGGGTTTAGCTTTGGTGAGAAGACTGTCTGCGGATCATCGAATTGGTGCGAAGGCAGTTTGGATTTTGACATGTCTTTATTCTGCAAAGCTGGGTATGCTAGTGATTTCATCAAAGTCGGTTGTCTGGATGTCAGCTGTTCTATTGTTGGCTGTAACGCCACCATTGCTTCTCTACAAGGATAAGTCAAGGACAGCCTCAAAGATGCAAACCTGGCAAGGTTATACACATGCAGGTGTGGTTTCCTTATCAGTTTGGTTTTGTCGTGAAACAATCTTTGAAGCCTTGCAGTGGTGGAATGGAAGAGCTCCCTCTGATGGCCTACTCCTGGGCTTCTGTATTGTCTTGATGGGCTTGGCTTGTGTCCCTATTGTGGCTCTCCACTTCTCTCATGTCTTGCCTGCGAAGAGATGCTTAGTGCTGGTGGTGGCTACTGGCTTGCTCTTTATCCTTTTACAACCACCTATTCCAGTATCATGGACTTACCGGTCTGACCTAATTAAAGCTGCCCGTCAGTCTGTTGATGACGTCTCCATATACGGGTTCATCGCACCAAAGCCTATGTGGCCATCATGGCTGCTAATTGTGGCTATCCTGCTTACTCTAGCTGCTGTTACATCTGTTATACCAATCAAATACATGGTTGAGTTGAGAGTGTTTTATTCCATAGCCATGGGACTTGCTCTAGGTATCTACATATCTACTGAGTTCTTCCTCCAGGCAGCTGTCCTGCATGTCCTCATTGTTGTAACCATGGTGTGTACCTCTGTGTTTGTGGTTTTCACTCATTTCCCATCTGCCTCAAGTACGAAGCTGCTTCCATGGATATTTGCTTTACTAGTAGCTCTCTTTCCTGTGACATATCTTTTGGAGGGCCAAGTGAGAATTAAAAGCATTCTTGGGGATGGTGGATTTGGAGACCTGGGAGAAGAAGAGAGGAAGCTTACAACTCTATTTGCTGTTGAGGGGGCAAGGACATCTCTTCTTGGTCTTTATGCAGCAATTTTCATGCTAGTAGCTCTGGAGGTAAAGTATGAACTCGCCTCATTATTGAGGGAAAAGGCTACTGAAAGGAGTGGAATCAGACACAGTCTTTCTGGTCAAAGCACATCTACTAGCTTTCCTTCAAGAATGAGATTCATGCAACAGCGCCGGGCTTCTAGTATCTCATCCTTCACAATCAAGAAAATGACTGCTGAGGGAGCATGGATGCCAGCAGTTGGTAATGTTGCTACTGTGATGTGCTTTGCCATATGCATCATCTTAAATGTCAATCTCACAGGTGGCTCAAATCGTGCAATATTCTTCCTGGCACCGATTTTGCTGCTACTCAACCAGGACTCAGATTTTGTTGCTGGGTTTGGGGACAAGCAGAGATATTTCCCTGTTACAATAGTTATATCATCCTACCTAGTCATCACTGCTGTGTACAGCATATGGGAAGAAATCTGGCATGGGAATGTAGGTTGGGGATTGGAAATCGGTGGTCCAGACTGGTTCTTTGCTGTGAAGAATTTGGCACTCCTTATTCTTACATTCCCGAGTCATATCCTTTTCAACAGGTACGTGTGGAGTTTAACAAAGCAGACAGACTCAACTCCATTGATAACTATGCCCCTTAATTTGCCATCTGTAATAATAACAGATGTGCTGAAGGTTAGGATATTAGGTCTCTTAGGAATTATTTATTCCCTAGCCCAGTATCTAGTATCTAGACAACAGTACATCTCAGGATTGAAGTATATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008422 GO:0009507 GO:0009536 GO:0015925 GO:0015926 GO:0016787 GO:0016798 GO:0033907 GO:0042973 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0071704 GO:0080079 GO:0080083 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

1119

Amino Acids

123.36

Weight (kDa)

9.23

Isoelectric Point (pI)

39.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26560
fragaria_vesca	FvH4_4g30310 FvH4_4g30310 FvH4_4g30310 FvH4_4g30310 FvH4_4g30310 FvH4_4g30310 FvH4_4g30310
malus_domestica	MD13G1064200.v1.1 MD13G1064300.v1.1 MD16G1062800.v1.1
prunus_persica	Prupe.1G284600_v2.0.a1
pyrus_communis	pycom16g05490
rosa_chinensis	RchiOBHm_Chr4g0438611
rosa_laevigata	RLG00000006347
rosa_multiflora	Rmu_sc0002327.1_g000001
rosa_roxburghii	Rroxscaffold_5G00379600
rosa_rugosa	Rorug04G0311700 Rorug04G0311800
rosa_samantha	Rh4AG362200 Rh4BG373600 Rh4CG387500
rosa_wichuraiana	Rw0G006690 Rw0G016640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1835
AasI	GACNNNNNNGTC	1 cut(s)	2098
AatII	GACGTC	1 cut(s)	2142
Acc36I	ACCTGC	1 cut(s)	1835
AccB1I	GGYRCC	5 cut(s)	320, 968, 1045, 1109, 2923
AccB7I	CCANNNNNTGG	2 cut(s)	892, 2831
AccII	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
AclWI	GGATC	2 cut(s)	1359, 1653
AcoI	YGGCCR	3 cut(s)	168, 198, 2177
AcsI	RAATTY	3 cut(s)	730, 951, 3124
AcuI	CTGAAG	7 cut(s)	61, 103, 358, 616, 1126, 1218, 3284
AcyI	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
AfaI	GTAC	8 cut(s)	41, 704, 1037, 2374, 2419, 3041, 3176, 3335
AfeI	AGCGCT	1 cut(s)	61
AflIII	ACRYGT	2 cut(s)	1682, 3177
AgeI	ACCGGT	1 cut(s)	2097
AhlI	ACTAGT	1 cut(s)	2449
AjuI	GAANNNNNNNTTGG	4 cut(s)	1052, 1084, 1403, 1435
AleI	CACNNNNGTG	1 cut(s)	3035
Alw21I	GWGCWC	2 cut(s)	519, 1921
Alw26I	GTCTC	5 cut(s)	437, 475, 2146, 2523, 3287
AlwI	GGATC	2 cut(s)	1359, 1653
AlwNI	CAGNNNCTG	2 cut(s)	892, 1241
Ama87I	CYCGRG	3 cut(s)	524, 749, 3151
Aor51HI	AGCGCT	1 cut(s)	61
ApoI	RAATTY	3 cut(s)	730, 951, 3124
ArsI	GACNNNNNNTTYG	6 cut(s)	2461, 2493, 2942, 2974, 3095, 3127
AsiGI	ACCGGT	1 cut(s)	2097
Asp700I	GAANNNNTTC	1 cut(s)	1388
AspA2I	CCTAGG	1 cut(s)	271
AspS9I	GGNCC	3 cut(s)	579, 2485, 3098
AsuC2I	CCSGG	1 cut(s)	2765
AsuHPI	GGTGA	2 cut(s)	1084, 1639
AsuII	TTCGAA	1 cut(s)	1457
AvaI	CYCGRG	3 cut(s)	524, 749, 3151
AvaII	GGWCC	1 cut(s)	3098
AvrII	CCTAGG	1 cut(s)	271
BalI	TGGCCA	1 cut(s)	2179
BanI	GGYRCC	5 cut(s)	320, 968, 1045, 1109, 2923
BanII	GRGCYC	2 cut(s)	913, 1921
BauI	CACGAG	1 cut(s)	1598
BbsI	GAAGAC	2 cut(s)	343, 1639
Bbv12I	GWGCWC	2 cut(s)	519, 1921
BbvCI	CCTCAGC	1 cut(s)	2808
BceAI	ACGGC	7 cut(s)	66, 142, 183, 185, 578, 724, 956
BcgI	CGANNNNNNTGC	6 cut(s)	235, 269, 925, 959, 2917, 2951
BciVI	GTATCC	1 cut(s)	1590
BcnI	CCSGG	1 cut(s)	2765
BcoDI	GTCTC	5 cut(s)	437, 475, 2146, 2523, 3287
BcuI	ACTAGT	1 cut(s)	2449
BfmI	CTRYAG	1 cut(s)	17
BfoI	RGCGCY	5 cut(s)	63, 132, 532, 972, 2764
BfuAI	ACCTGC	1 cut(s)	1835
BfuI	GTATCC	1 cut(s)	1590
BglI	GCCNNNNNGGC	3 cut(s)	197, 2176, 2185
BglII	AGATCT	1 cut(s)	143
BlnI	CCTAGG	1 cut(s)	271
Bme18I	GGWCC	1 cut(s)	3098
BmeT110I	CYCGRG	3 cut(s)	524, 749, 3151
BmgT120I	GGNCC	3 cut(s)	579, 2485, 3098
BmiI	GGNNCC	9 cut(s)	88, 322, 720, 910, 970, 1047, 1111, 1313, 2925
BmrI	ACTGGG	1 cut(s)	3304
BmsI	GCATC	6 cut(s)	768, 1126, 1806, 2012, 2811, 2877
BmuI	ACTGGG	1 cut(s)	3304
BpiI	GAAGAC	2 cut(s)	343, 1639
BpmI	CTGGAG	5 cut(s)	461, 1122, 1209, 2312, 2654
Bpu10I	CCTNAGC	1 cut(s)	2808
Bpu14I	TTCGAA	1 cut(s)	1457
BpuEI	CTTGAG	2 cut(s)	134, 2398
BpuMI	CCSGG	1 cut(s)	2765
BsaAI	YACGTR	1 cut(s)	3178
BsaBI	GATNNNNATC	1 cut(s)	494
BsaHI	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
BsaI	GGTCTC	4 cut(s)	437, 475, 2523, 3287
BsaWI	WCCGGW	3 cut(s)	250, 317, 2097
BsaXI	ACNNNNNCTCC	4 cut(s)	1182, 1212, 2627, 2657
Bse118I	RCCGGY	2 cut(s)	416, 2097
Bse1I	ACTGG	5 cut(s)	478, 2050, 2081, 3110, 3310
Bse3DI	GCAATG	5 cut(s)	88, 613, 801, 1499, 1775
Bse8I	GATNNNNATC	1 cut(s)	494
BseJI	GATNNNNATC	1 cut(s)	494
BseMI	GCAATG	5 cut(s)	88, 613, 801, 1499, 1775
BseMII	CTCAG	6 cut(s)	371, 754, 2307, 2799, 2967, 3354
BseNI	ACTGG	5 cut(s)	478, 2050, 2081, 3110, 3310
BseRI	GAGGAG	3 cut(s)	221, 524, 553
BseX3I	CGGCCG	1 cut(s)	168
BseYI	CCCAGC	3 cut(s)	1120, 1702, 2966
BsgI	GTGCAG	1 cut(s)	1116
Bsh1236I	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
Bsh1285I	CGRYCG	2 cut(s)	171, 255
BshNI	GGYRCC	5 cut(s)	320, 968, 1045, 1109, 2923
BshTI	ACCGGT	1 cut(s)	2097
BsiEI	CGRYCG	2 cut(s)	171, 255
BsiHKAI	GWGCWC	2 cut(s)	519, 1921
BsiHKCI	CYCGRG	3 cut(s)	524, 749, 3151
BsiSI	CCGG	6 cut(s)	11, 251, 318, 417, 2098, 2764
BslFI	GGGAC	6 cut(s)	197, 533, 1363, 1961, 2301, 2990
BsmAI	GTCTC	5 cut(s)	437, 475, 2146, 2523, 3287
BsmBI	CGTCTC	1 cut(s)	2146
BsmFI	GGGAC	6 cut(s)	197, 533, 1363, 1961, 2301, 2990
BsmI	GAATGC	1 cut(s)	2505
Bso31I	GGTCTC	4 cut(s)	437, 475, 2523, 3287
BsoBI	CYCGRG	3 cut(s)	524, 749, 3151
Bsp119I	TTCGAA	1 cut(s)	1457
Bsp1286I	GDGCHC	3 cut(s)	519, 913, 1921
Bsp1407I	TGTACA	1 cut(s)	3039
Bsp143I	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
Bsp19I	CCATGG	3 cut(s)	2283, 2364, 2432
Bsp68I	TCGCGA	2 cut(s)	160, 260
BspCNI	CTCAG	6 cut(s)	370, 753, 2308, 2800, 2966, 3353
BspFNI	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	9 cut(s)	88, 322, 720, 910, 970, 1047, 1111, 1313, 2925
BspMAI	CTGCAG	1 cut(s)	21
BspMI	ACCTGC	1 cut(s)	1835
BspPI	GGATC	2 cut(s)	1359, 1653
BspQI	GCTCTTC	2 cut(s)	869, 1909
BspT104I	TTCGAA	1 cut(s)	1457
BspT107I	GGYRCC	5 cut(s)	320, 968, 1045, 1109, 2923
BspTNI	GGTCTC	4 cut(s)	437, 475, 2523, 3287
BsrDI	GCAATG	5 cut(s)	88, 613, 801, 1499, 1775
BsrFI	RCCGGY	2 cut(s)	416, 2097
BsrGI	TGTACA	1 cut(s)	3039
BsrI	ACTGG	5 cut(s)	478, 2050, 2081, 3110, 3310
BssAI	RCCGGY	2 cut(s)	416, 2097
BssMI	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
BssNI	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
BssSI	CACGAG	1 cut(s)	1598
BssT1I	CCWWGG	4 cut(s)	271, 2283, 2364, 2432
Bst2BI	CACGAG	1 cut(s)	1598
Bst4CI	ACNGT	4 cut(s)	1638, 2702, 2848, 3333
BstACI	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
BstAUI	TGTACA	1 cut(s)	3039
BstBAI	YACGTR	1 cut(s)	3178
BstBI	TTCGAA	1 cut(s)	1457
BstC8I	GCNNGC	9 cut(s)	58, 418, 519, 1243, 1258, 1372, 2013, 2051, 2826
BstDEI	CTNAG	8 cut(s)	357, 740, 2026, 2316, 2808, 2953, 3286, 3340
BstDSI	CCRYGG	6 cut(s)	23, 706, 840, 2283, 2364, 2432
BstENI	CCTNNNNNAGG	1 cut(s)	901
BstFNI	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
BstH2I	RGCGCY	5 cut(s)	63, 132, 532, 972, 2764
BstKTI	GATC	7 cut(s)	146, 238, 285, 363, 459, 1354, 1648
BstMAI	GTCTC	5 cut(s)	437, 475, 2146, 2523, 3287
BstMBI	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
BstMCI	CGRYCG	2 cut(s)	171, 255
BstNSI	RCATGY	4 cut(s)	1378, 1686, 1844, 2348
BstSFI	CTRYAG	1 cut(s)	17
BstUI	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
BstV2I	GAAGAC	2 cut(s)	343, 1639
BstX2I	RGATCY	2 cut(s)	143, 1351
BstXI	CCANNNNNNTGG	3 cut(s)	1028, 2088, 2284
BstYI	RGATCY	2 cut(s)	143, 1351
BstZI	CGGCCG	1 cut(s)	168
BsuI	GTATCC	1 cut(s)	1590
BtgI	CCRYGG	6 cut(s)	23, 706, 840, 2283, 2364, 2432
BtgZI	GCGATG	1 cut(s)	2143
BtsI	GCAGTG	4 cut(s)	1158, 1226, 1907, 3030
BtsIMutI	CAGTG	4 cut(s)	1158, 1226, 1907, 3030
BtuMI	TCGCGA	2 cut(s)	160, 260
BveI	ACCTGC	1 cut(s)	1835
Cac8I	GCNNGC	9 cut(s)	58, 418, 519, 1243, 1258, 1372, 2013, 2051, 2826
CaiI	CAGNNNCTG	2 cut(s)	892, 1241
CciI	TCATGA	1 cut(s)	960
Cfr10I	RCCGGY	2 cut(s)	416, 2097
Cfr13I	GGNCC	3 cut(s)	579, 2485, 3098
Cfr42I	CCGCGG	2 cut(s)	26, 843
CseI	GACGC	3 cut(s)	308, 322, 451
Csp6I	GTAC	8 cut(s)	40, 703, 1036, 2373, 2418, 3040, 3175, 3334
CspAI	ACCGGT	1 cut(s)	2097
CspCI	CAANNNNNGTGG	2 cut(s)	1593, 1628
CviQI	GTAC	8 cut(s)	40, 703, 1036, 2373, 2418, 3040, 3175, 3334
DdeI	CTNAG	8 cut(s)	357, 740, 2026, 2316, 2808, 2953, 3286, 3340
DinI	GGCGCC	1 cut(s)	970
DpnI	GATC	7 cut(s)	145, 237, 284, 362, 458, 1353, 1647
DpnII	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
DrdI	GACNNNNNNGTC	1 cut(s)	2098
DseDI	GACNNNNNNGTC	1 cut(s)	2098
EaeI	YGGCCR	3 cut(s)	168, 198, 2177
EagI	CGGCCG	1 cut(s)	168
EciI	GGCGGA	3 cut(s)	580, 823, 1041
Ecl136II	GAGCTC	1 cut(s)	1919
EclXI	CGGCCG	1 cut(s)	168
Eco130I	CCWWGG	4 cut(s)	271, 2283, 2364, 2432
Eco147I	AGGCCT	1 cut(s)	276
Eco24I	GRGCYC	2 cut(s)	913, 1921
Eco31I	GGTCTC	4 cut(s)	437, 475, 2523, 3287
Eco32I	GATATC	1 cut(s)	1131
Eco47I	GGWCC	1 cut(s)	3098
Eco47III	AGCGCT	1 cut(s)	61
Eco52I	CGGCCG	1 cut(s)	168
Eco53kI	GAGCTC	1 cut(s)	1919
Eco57I	CTGAAG	7 cut(s)	61, 103, 358, 616, 1126, 1218, 3284
Eco88I	CYCGRG	3 cut(s)	524, 749, 3151
EcoICRI	GAGCTC	1 cut(s)	1919
EcoNI	CCTNNNNNAGG	1 cut(s)	901
EcoRI	GAATTC	1 cut(s)	951
EcoRV	GATATC	1 cut(s)	1131
EcoT14I	CCWWGG	4 cut(s)	271, 2283, 2364, 2432
EcoT22I	ATGCAT	2 cut(s)	1501, 2870
EcoT38I	GRGCYC	2 cut(s)	913, 1921
EgeI	GGCGCC	1 cut(s)	970
EheI	GGCGCC	1 cut(s)	970
ErhI	CCWWGG	4 cut(s)	271, 2283, 2364, 2432
Esp3I	CGTCTC	1 cut(s)	2146
FalI	AAGNNNNNCTT	4 cut(s)	1451, 1483, 2009, 2041
FaqI	GGGAC	6 cut(s)	197, 533, 1363, 1961, 2301, 2990
FauI	CCCGC	2 cut(s)	122, 795
FauNDI	CATATG	2 cut(s)	2864, 3047
FriOI	GRGCYC	2 cut(s)	913, 1921
GsaI	CCCAGC	3 cut(s)	1124, 1706, 2970
GsuI	CTGGAG	5 cut(s)	461, 1122, 1209, 2312, 2654
HaeII	RGCGCY	5 cut(s)	63, 132, 532, 972, 2764
HapII	CCGG	6 cut(s)	11, 251, 318, 417, 2098, 2764
HgaI	GACGC	3 cut(s)	308, 322, 451
Hin1I	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
HincII	GTYRAC	1 cut(s)	390
HindII	GTYRAC	1 cut(s)	390
HindIII	AAGCTT	1 cut(s)	2552
HpaII	CCGG	6 cut(s)	11, 251, 318, 417, 2098, 2764
HphI	GGTGA	2 cut(s)	1084, 1639
Hpy166II	GTNNAC	3 cut(s)	390, 2373, 3040
Hpy188I	TCNGA	9 cut(s)	360, 850, 936, 1135, 1205, 1927, 2104, 2696, 2956
Hpy8I	GTNNAC	3 cut(s)	390, 2373, 3040
Hpy99I	CGWCG	5 cut(s)	206, 260, 302, 385, 599
HpyCH4III	ACNGT	4 cut(s)	1638, 2702, 2848, 3333
HpyCH4IV	ACGT	2 cut(s)	2139, 3177
HpyF3I	CTNAG	8 cut(s)	357, 740, 2026, 2316, 2808, 2953, 3286, 3340
HpySE526I	ACGT	2 cut(s)	2139, 3177
Hsp92I	GRCGYC	5 cut(s)	300, 333, 462, 969, 2139
KasI	GGCGCC	1 cut(s)	968
KroI	GCCGGC	1 cut(s)	416
KroNI	GCCGGC	1 cut(s)	418
KspI	CCGCGG	2 cut(s)	26, 843
Kzo9I	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
LguI	GCTCTTC	2 cut(s)	869, 1909
LweI	GCATC	6 cut(s)	768, 1126, 1806, 2012, 2811, 2877
MaeII	ACGT	2 cut(s)	2139, 3177
MalI	GATC	7 cut(s)	145, 237, 284, 362, 458, 1353, 1647
MboI	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
MfeI	CAATTG	1 cut(s)	510
MflI	RGATCY	2 cut(s)	143, 1351
MhlI	GDGCHC	3 cut(s)	519, 913, 1921
MlsI	TGGCCA	1 cut(s)	2179
MluNI	TGGCCA	1 cut(s)	2179
Mly113I	GGCGCC	1 cut(s)	969
MlyI	GAGTC	5 cut(s)	104, 1020, 2945, 3163, 3197
MmeI	TCCRAC	1 cut(s)	1183
Mox20I	TGGCCA	1 cut(s)	2179
Mph1103I	ATGCAT	2 cut(s)	1501, 2870
MroNI	GCCGGC	1 cut(s)	416
MroXI	GAANNNNTTC	1 cut(s)	1388
MscI	TGGCCA	1 cut(s)	2179
MseI	TTAA	6 cut(s)	1533, 2112, 2499, 2876, 3188, 3231
MslI	CAYNNNNRTG	5 cut(s)	1043, 1845, 2282, 3035, 3069
Msp20I	TGGCCA	1 cut(s)	2179
MspA1I	CMGCKG	7 cut(s)	25, 636, 842, 943, 1100, 1748, 2336
MspI	CCGG	6 cut(s)	11, 251, 318, 417, 2098, 2764
MunI	CAATTG	1 cut(s)	510
Mva1269I	GAATGC	1 cut(s)	2505
MvnI	CGCG	6 cut(s)	25, 160, 182, 206, 260, 842
NaeI	GCCGGC	1 cut(s)	418
NarI	GGCGCC	1 cut(s)	969
NciI	CCSGG	1 cut(s)	2765
NcoI	CCATGG	3 cut(s)	2283, 2364, 2432
NdeI	CATATG	2 cut(s)	2864, 3047
NdeII	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
NgoMIV	GCCGGC	1 cut(s)	416
NlaIV	GGNNCC	9 cut(s)	88, 322, 720, 910, 970, 1047, 1111, 1313, 2925
NmeAIII	GCCGAG	2 cut(s)	219, 466
NmuCI	GTSAC	5 cut(s)	922, 1072, 1489, 1600, 2467
NruI	TCGCGA	2 cut(s)	160, 260
NsiI	ATGCAT	2 cut(s)	1501, 2870
NspI	RCATGY	4 cut(s)	1378, 1686, 1844, 2348
NspV	TTCGAA	1 cut(s)	1457
OliI	CACNNNNGTG	1 cut(s)	3035
PaeR7I	CTCGAG	2 cut(s)	524, 749
PagI	TCATGA	1 cut(s)	960
PaqCI	CACCTGC	1 cut(s)	1835
PceI	AGGCCT	1 cut(s)	276
PciI	ACATGT	1 cut(s)	1682
PciSI	GCTCTTC	2 cut(s)	869, 1909
PcsI	WCGNNNNNNNCGW	1 cut(s)	932
PctI	GAATGC	1 cut(s)	2505
PdiI	GCCGGC	1 cut(s)	418
PdmI	GAANNNNTTC	1 cut(s)	1388
PfeI	GAWTC	8 cut(s)	162, 409, 490, 502, 695, 931, 2691, 2748
PflFI	GACNNNGTC	1 cut(s)	2700
PflMI	CCANNNNNTGG	2 cut(s)	892, 2831
PinAI	ACCGGT	1 cut(s)	2097
PleI	GAGTC	5 cut(s)	104, 1019, 2945, 3162, 3197
PluTI	GGCGCC	1 cut(s)	972
PpsI	GAGTC	5 cut(s)	104, 1019, 2945, 3162, 3197
Ppu21I	YACGTR	1 cut(s)	3178
PscI	ACATGT	1 cut(s)	1682
Psp124BI	GAGCTC	1 cut(s)	1921
PspFI	CCCAGC	3 cut(s)	1120, 1702, 2966
PspN4I	GGNNCC	9 cut(s)	88, 322, 720, 910, 970, 1047, 1111, 1313, 2925
PspPI	GGNCC	3 cut(s)	579, 2485, 3098
PspXI	VCTCGAGB	1 cut(s)	524
PsrI	GAACNNNNNNTAC	2 cut(s)	764, 796
PstI	CTGCAG	1 cut(s)	21
PstNI	CAGNNNCTG	2 cut(s)	892, 1241
PsuI	RGATCY	2 cut(s)	143, 1351
PsyI	GACNNNGTC	1 cut(s)	2700
PvuII	CAGCTG	5 cut(s)	636, 943, 1100, 1748, 2336
RruI	TCGCGA	2 cut(s)	160, 260
RsaI	GTAC	8 cut(s)	41, 704, 1037, 2374, 2419, 3041, 3176, 3335
RsaNI	GTAC	8 cut(s)	40, 703, 1036, 2373, 2418, 3040, 3175, 3334
RseI	CAYNNNNRTG	5 cut(s)	1043, 1845, 2282, 3035, 3069
SacI	GAGCTC	1 cut(s)	1921
SacII	CCGCGG	2 cut(s)	26, 843
SapI	GCTCTTC	2 cut(s)	869, 1909
SaqAI	TTAA	6 cut(s)	1533, 2112, 2499, 2876, 3188, 3231
Sau3AI	GATC	7 cut(s)	143, 235, 282, 360, 456, 1351, 1645
Sau96I	GGNCC	3 cut(s)	579, 2485, 3098
SchI	GAGTC	5 cut(s)	104, 1020, 2945, 3163, 3197
SduI	GDGCHC	3 cut(s)	519, 913, 1921
SfaNI	GCATC	6 cut(s)	768, 1126, 1806, 2012, 2811, 2877
SfcI	CTRYAG	1 cut(s)	17
SfoI	GGCGCC	1 cut(s)	970
Sfr274I	CTCGAG	2 cut(s)	524, 749
Sfr303I	CCGCGG	2 cut(s)	26, 843
SfuI	TTCGAA	1 cut(s)	1457
SgrBI	CCGCGG	2 cut(s)	26, 843
SinI	GGWCC	1 cut(s)	3098
SlaI	CTCGAG	2 cut(s)	524, 749
SmiMI	CAYNNNNRTG	5 cut(s)	1043, 1845, 2282, 3035, 3069
SmlI	CTYRAG	4 cut(s)	149, 524, 749, 2413
SmoI	CTYRAG	4 cut(s)	149, 524, 749, 2413
SpeI	ACTAGT	1 cut(s)	2449
SseBI	AGGCCT	1 cut(s)	276
SspDI	GGCGCC	1 cut(s)	968
SspI	AATATT	2 cut(s)	1360, 2913
SstI	GAGCTC	1 cut(s)	1921
StuI	AGGCCT	1 cut(s)	276
StyI	CCWWGG	4 cut(s)	271, 2283, 2364, 2432
TaaI	ACNGT	4 cut(s)	1638, 2702, 2848, 3333
TaiI	ACGT	2 cut(s)	2142, 3180
TaqI	TCGA	7 cut(s)	234, 297, 498, 525, 750, 1457, 1651
TatI	WGTACW	2 cut(s)	3039, 3333
TfiI	GAWTC	8 cut(s)	162, 409, 490, 502, 695, 931, 2691, 2748
Tru1I	TTAA	6 cut(s)	1533, 2112, 2499, 2876, 3188, 3231
Tru9I	TTAA	6 cut(s)	1533, 2112, 2499, 2876, 3188, 3231
TscAI	CASTG	4 cut(s)	1165, 1233, 1907, 3037
TseFI	GTSAC	5 cut(s)	922, 1072, 1489, 1600, 2467
Tsp45I	GTSAC	5 cut(s)	922, 1072, 1489, 1600, 2467
TspDTI	ATGAA	8 cut(s)	859, 977, 1014, 1710, 2146, 2608, 2661, 2740
TspGWI	ACGGA	2 cut(s)	23, 27
TspRI	CASTG	4 cut(s)	1165, 1233, 1907, 3037
Tth111I	GACNNNGTC	1 cut(s)	2700
Van91I	CCANNNNNTGG	2 cut(s)	892, 2831
VpaK11BI	GGWCC	1 cut(s)	3098
XagI	CCTNNNNNAGG	1 cut(s)	901
XapI	RAATTY	3 cut(s)	730, 951, 3124
XbaI	TCTAGA	2 cut(s)	140, 3323
XceI	RCATGY	4 cut(s)	1378, 1686, 1844, 2348
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2172
XhoI	CTCGAG	2 cut(s)	524, 749
XmaJI	CCTAGG	1 cut(s)	271
XmnI	GAANNNNTTC	1 cut(s)	1388
ZraI	GACGTC	1 cut(s)	2140
Zsp2I	ATGCAT	2 cut(s)	1501, 2870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.