Rorug04G0357100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0014338
Physical Location & Seq
Forward (+)
52933135 .. 52935816
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0357100.1

Sequence Viewer

Length: 1944 bp
ATGGCTACCGTGGCTGTGTTTATTTTCTCTGTCTTCACTCATCTTCTGCTTCTTTACTCCGCTGAGAGTTGTCCACCCTCTTTCTGTAATGAGAGAGTAGGTAATATCTCCTTCCCCTTTAAAAACACAACACAGAGTCCTGAATGCGGATTGTTCACTGTCAACTGTTCTGACAGCCTTAATCCGAAGATCCAACTCAAAGATGGAGGATACTGGTTCCACTTGGAAAAAATGACTGGATCAAAATCCGTTTTTATCAATGACGGCCGGCTTCAGGAGCGCATAGAGCGCTTAAAAGGAGATACATGTGATGATGATGTTTTCAATGATTTAAGTCTTCCAGGCCCTACTCCCATCTTCCATACAAACAGCCTTAACCTGTTCAAATGCAACAACACCCAGGAGAAATCTCCTTACAAGGATCTTAAATATGCCTGCAGGAGTGTAAATCATATTTACTATACATCCAATGATAGTTTTTTTTTTGGTCAGATATCAAATCATAGTTTAGATTGCCCACCCATTCCAATTCCCATACATCCACATTCCCGTCCCAATGTCTATAGCCCTTCTGCATTGACTGCTAAATTCTCCCTACACGTGCCTTTTACCGAAGAATGTGATCAGGATGAGGAAGGCAAATGTGCCAAAGCAGCTAACAACAGCTTTTGCTATTTTGCAGGAAATCATAATTTGAAGCTAGGACTTGGTATTGGACTTGGAGGTGCAGCACTCCTAGGAGTCCTTGCAGCATGCTTGTTTCTTTTCAGGCGTTACAAAAAAAAGCTCGCTTCTTCAAACGTACTCTCCAGGAACATTTCTTCTCAGCCCTACTCAAAATCAGACCTAGAAGGGGGCAATGCCTACTTTGGTGTTTCGGTCTTCACCTACGAGGAACTTGAAGAAGCCACTAATCATTTTGACAGTGAAAAAGAGCTTGGAGATGGAGGTTTTGGAACTGTCTACTATGGCAAACTCAAAGATGGCCGGGAAGTTGCAGTCAAGCGTTTGTACGAGCACAATTACAAACGTGTGGAACAGTTTATGAATGAAATTGAAATTCTCACCCGTCTGCGCCACAAAAACTTAGTCTCCCTCTATGGTTGCACTTCACGCCGCAGCCGTGAACTCATCCTTGTCTATGAATACATTCCCAATGGCACTGTTGCTGATCATCTCCACGGCGACCTAGCAGAACGTGGTTTACTCACGTGGCCTATTCGTATGAGCATTGCCATAGAAACTGCCAATGCATTGTCTTACCTCCATGTTACTGATATTGTGCATCGTGATGTGAAGACTACCAACATTCTTCTTGATAACAACTTCTGTGTTAAAGTTGCAGATTTTGGGCTCTCACGGCTTTTTCCCCTTGATGTCACTCATGTCTCTACTGCTCCACAAGGGACCCCTGGTTATGTTGACCCAGAGTATCACCAGTGTTACCAGCTAACTAGTAAGAGTGATGTTTATAGTTTTGGGGTTGTCCTCATTGAGCTGATATCATCTTTGCCAGCAGTTGATATAACTAGGCATAGGCATGAGATCAATTTGTCTAACATAGCTATAAACAAGATTCAAAGAGGTTTATACAGTGAGCTGGTAGATTCATGTCTTGGGTTTGAGTCGGATCATGAAGTTAAAAGGATGACAATTGCAGTGGCAGAGTTGGCTTTCCAATGTTTGCAGCAGGACAATGATGCAAGGCCTACCATGTCTGAGGTTTTGGAAACTTTGCAGATAATTGAAAGTGGTAAAGATGTTCCAGAGAATTTGGAGGAGGACTTTGGTGATGTTGAGATGAGAAAGAGTATACAGCCACCACCTTCACCAGAATGTGATGAGCTTCAGTTGTTGAAGAACATGAGGCCACCATTTTCACCGATTTCCGTGACCCAAAACTGGCCTAGCACTAGGTCCGATACACCTAATGCCAGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

647

Amino Acids

72.65

Weight (kDa)

5.63

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 308 - 577 1.9e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 310 - 579 1.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69980
fragaria_vesca FvH4_4g35380 FvH4_4g35380
malus_domestica MD16G1083100.v1.1
prunus_persica Prupe.1G262900_v2.0.a1 Prupe.1G262900_v2.0.a1
pyrus_communis pycom16g07200
rosa_chinensis RchiOBHm_Chr4g0444991
rosa_laevigata RLG00000005779
rosa_multiflora Rmu_ssc0000285.1_g000002
rosa_roxburghii Rroxscaffold_5G00385500
rosa_rugosa Rorug04G0357100 Rorug04G0357200
rosa_samantha Rh4AG419000 Rh4BG430700 Rh4DG426600
rosa_wichuraiana Rw4G035870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 963, 1813
AciI CCGC 3 cut(s) 60, 147, 1117
AclWI GGATC 4 cut(s) 184, 247, 429, 1638
AcoI YGGCCR 2 cut(s) 265, 985
AcsI RAATTY 3 cut(s) 587, 1059, 1771
AcuI CTGAAG 2 cut(s) 257, 1832
AcvI CACGTG 2 cut(s) 601, 1212
AfaI GTAC 2 cut(s) 804, 1013
AfeI AGCGCT 1 cut(s) 290
AfiI CCNNNNNNNGG 4 cut(s) 146, 274, 853, 1902
AflIII ACRYGT 3 cut(s) 305, 598, 1030
AgsI TTSAA 9 cut(s) 325, 385, 697, 798, 902, 1058, 1580, 1748, 1858
AhlI ACTAGT 1 cut(s) 1454
AjnI CCWGG 4 cut(s) 340, 399, 809, 1411
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
Alw21I GWGCWC 1 cut(s) 1020
Alw26I GTCTC 2 cut(s) 1096, 1393
AlwI GGATC 4 cut(s) 184, 247, 429, 1638
AlwNI CAGNNNCTG 1 cut(s) 1941
Aor51HI AGCGCT 1 cut(s) 290
AoxI GGCC 7 cut(s) 265, 343, 985, 1214, 1706, 1868, 1904
ApeKI GCWGC 5 cut(s) 653, 728, 749, 1119, 1687
ApoI RAATTY 3 cut(s) 587, 1059, 1771
ArsI GACNNNNNNTTYG 2 cut(s) 1074, 1106
Asp700I GAANNNNTTC 1 cut(s) 1149
AspA2I CCTAGG 1 cut(s) 736
AspLEI GCGC 3 cut(s) 282, 291, 1077
AspS9I GGNCC 3 cut(s) 344, 1407, 1917
AsuC2I CCSGG 1 cut(s) 989
AsuHPI GGTGA 6 cut(s) 877, 1057, 1427, 1802, 1821, 1872
AvaII GGWCC 2 cut(s) 1407, 1917
AvrII CCTAGG 1 cut(s) 736
BanII GRGCYC 1 cut(s) 1356
BbrPI CACGTG 2 cut(s) 601, 1212
BbsI GAAGAC 4 cut(s) 25, 329, 874, 1304
Bbv12I GWGCWC 1 cut(s) 1020
BbvI GCAGC 5 cut(s) 665, 740, 761, 1131, 1699
BccI CCATC 4 cut(s) 197, 362, 938, 977
BceAI ACGGC 4 cut(s) 280, 1107, 1198, 1376
BciT130I CCWGG 4 cut(s) 342, 401, 811, 1413
BciVI GTATCC 1 cut(s) 203
BclI TGATCA 2 cut(s) 622, 1171
BcnI CCSGG 1 cut(s) 989
BcoDI GTCTC 2 cut(s) 1096, 1393
BcuI ACTAGT 1 cut(s) 1454
BfaI CTAG 8 cut(s) 701, 737, 848, 1190, 1455, 1530, 1908, 1914
BfmI CTRYAG 2 cut(s) 436, 562
BfoI RGCGCY 1 cut(s) 292
BfuI GTATCC 1 cut(s) 203
BisI GCNGC 6 cut(s) 654, 729, 750, 1117, 1120, 1688
BlnI CCTAGG 1 cut(s) 736
BlsI GCNGC 6 cut(s) 655, 730, 751, 1118, 1121, 1689
Bme1390I CCNGG 5 cut(s) 342, 401, 811, 989, 1413
Bme18I GGWCC 2 cut(s) 1407, 1917
BmgT120I GGNCC 3 cut(s) 344, 1407, 1917
BmiI GGNNCC 3 cut(s) 218, 1408, 1409
BmrFI CCNGG 5 cut(s) 342, 401, 811, 989, 1413
BmsI GCATC 2 cut(s) 1294, 1690
BpiI GAAGAC 4 cut(s) 25, 329, 874, 1304
BpmI CTGGAG 1 cut(s) 793
BpuMI CCSGG 1 cut(s) 989
BsaAI YACGTR 2 cut(s) 601, 1212
BsaBI GATNNNNATC 1 cut(s) 244
BsaJI CCNNGG 5 cut(s) 9, 399, 736, 1180, 1411
BsaXI ACNNNNNCTCC 4 cut(s) 791, 821, 1076, 1106
Bsc4I CCNNNNNNNGG 4 cut(s) 146, 274, 853, 1902
Bse118I RCCGGY 1 cut(s) 267
Bse1I ACTGG 5 cut(s) 218, 241, 1438, 1907, 1935
Bse3DI GCAATG 2 cut(s) 865, 1230
Bse8I GATNNNNATC 1 cut(s) 244
BseBI CCWGG 4 cut(s) 342, 401, 811, 1413
BseDI CCNNGG 5 cut(s) 9, 399, 736, 1180, 1411
BseGI GGATG 5 cut(s) 464, 538, 634, 1131, 1653
BseJI GATNNNNATC 1 cut(s) 244
BseLI CCNNNNNNNGG 4 cut(s) 146, 274, 853, 1902
BseMI GCAATG 2 cut(s) 865, 1230
BseMII CTCAG 3 cut(s) 54, 839, 1710
BseNI ACTGG 5 cut(s) 218, 241, 1438, 1907, 1935
BseRI GAGGAG 1 cut(s) 1793
BseX3I CGGCCG 1 cut(s) 265
BseXI GCAGC 5 cut(s) 665, 740, 761, 1131, 1699
BsgI GTGCAG 1 cut(s) 747
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 7 cut(s) 267, 345, 987, 1216, 1708, 1870, 1906
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 1 cut(s) 1020
BsiSI CCGG 2 cut(s) 268, 988
BslFI GGGAC 2 cut(s) 537, 1420
BslI CCNNNNNNNGG 4 cut(s) 146, 274, 853, 1902
BsmAI GTCTC 2 cut(s) 1096, 1393
BsmFI GGGAC 2 cut(s) 537, 1420
BsmI GAATGC 1 cut(s) 149
BsnI GGCC 7 cut(s) 267, 345, 987, 1216, 1708, 1870, 1906
Bsp1286I GDGCHC 2 cut(s) 1020, 1356
Bsp143I GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
BspACI CCGC 3 cut(s) 60, 147, 1117
BspANI GGCC 7 cut(s) 267, 345, 987, 1216, 1708, 1870, 1906
BspCNI CTCAG 3 cut(s) 55, 838, 1711
BspHI TCATGA 1 cut(s) 1633
BspLI GGNNCC 3 cut(s) 218, 1408, 1409
BspMAI CTGCAG 1 cut(s) 440
BspPI GGATC 4 cut(s) 184, 247, 429, 1638
BsrDI GCAATG 2 cut(s) 865, 1230
BsrFI RCCGGY 1 cut(s) 267
BsrI ACTGG 5 cut(s) 218, 241, 1438, 1907, 1935
BssAI RCCGGY 1 cut(s) 267
BssECI CCNNGG 5 cut(s) 9, 399, 736, 1180, 1411
BssMI GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
BssNAI GTATAC 1 cut(s) 1814
BssT1I CCWWGG 1 cut(s) 736
Bst1107I GTATAC 1 cut(s) 1814
Bst2UI CCWGG 4 cut(s) 342, 401, 811, 1413
Bst4CI ACNGT 8 cut(s) 10, 160, 167, 926, 961, 1041, 1165, 1595
BstAPI GCANNNNNTGC 1 cut(s) 581
BstBAI YACGTR 2 cut(s) 601, 1212
BstC8I GCNNGC 5 cut(s) 269, 436, 754, 789, 1515
BstDEI CTNAG 4 cut(s) 63, 825, 1087, 1719
BstDSI CCRYGG 2 cut(s) 9, 1180
BstF5I GGATG 5 cut(s) 464, 538, 634, 1131, 1653
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 3 cut(s) 282, 291, 1077
BstKTI GATC 7 cut(s) 192, 242, 424, 625, 1174, 1548, 1633
BstMAI GTCTC 2 cut(s) 1096, 1393
BstMBI GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 9 cut(s) 11, 277, 286, 288, 581, 653, 1113, 1360, 1670
BstNI CCWGG 4 cut(s) 342, 401, 811, 1413
BstNSI RCATGY 2 cut(s) 309, 756
BstSCI CCNGG 5 cut(s) 340, 399, 809, 987, 1411
BstSFI CTRYAG 2 cut(s) 436, 562
BstV1I GCAGC 5 cut(s) 665, 740, 761, 1131, 1699
BstV2I GAAGAC 4 cut(s) 25, 329, 874, 1304
BstX2I RGATCY 2 cut(s) 189, 421
BstYI RGATCY 2 cut(s) 189, 421
BstZ17I GTATAC 1 cut(s) 1814
BstZI CGGCCG 1 cut(s) 265
BsuI GTATCC 1 cut(s) 203
BsuRI GGCC 7 cut(s) 267, 345, 987, 1216, 1708, 1870, 1906
BtgI CCRYGG 2 cut(s) 9, 1180
BtsCI GGATG 5 cut(s) 464, 538, 634, 1131, 1653
BtsI GCAGTG 1 cut(s) 1665
BtsIMutI CAGTG 6 cut(s) 156, 931, 1161, 1445, 1600, 1665
Cac8I GCNNGC 5 cut(s) 269, 436, 754, 789, 1515
CaiI CAGNNNCTG 1 cut(s) 1941
CciI TCATGA 1 cut(s) 1633
CfoI GCGC 3 cut(s) 282, 291, 1077
Cfr10I RCCGGY 1 cut(s) 267
Cfr13I GGNCC 3 cut(s) 344, 1407, 1917
Csp6I GTAC 2 cut(s) 803, 1012
CspCI CAANNNNNGTGG 2 cut(s) 1641, 1676
CviAII CATG 9 cut(s) 306, 753, 1268, 1385, 1541, 1611, 1634, 1714, 1864
CviQI GTAC 2 cut(s) 803, 1012
DdeI CTNAG 4 cut(s) 63, 825, 1087, 1719
DpnI GATC 7 cut(s) 191, 241, 423, 624, 1173, 1547, 1632
DpnII GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
DraI TTTAAA 1 cut(s) 121
EaeI YGGCCR 2 cut(s) 265, 985
EagI CGGCCG 1 cut(s) 265
EclXI CGGCCG 1 cut(s) 265
Eco130I CCWWGG 1 cut(s) 736
Eco147I AGGCCT 1 cut(s) 1708
Eco24I GRGCYC 1 cut(s) 1356
Eco32I GATATC 2 cut(s) 495, 1503
Eco47I GGWCC 2 cut(s) 1407, 1917
Eco47III AGCGCT 1 cut(s) 290
Eco52I CGGCCG 1 cut(s) 265
Eco57I CTGAAG 2 cut(s) 257, 1832
Eco72I CACGTG 2 cut(s) 601, 1212
EcoO109I RGGNCCY 2 cut(s) 344, 1407
EcoRII CCWGG 4 cut(s) 340, 399, 809, 1411
EcoRV GATATC 2 cut(s) 495, 1503
EcoT14I CCWWGG 1 cut(s) 736
EcoT22I ATGCAT 1 cut(s) 1255
EcoT38I GRGCYC 1 cut(s) 1356
ErhI CCWWGG 1 cut(s) 736
FaeI CATG 9 cut(s) 309, 756, 1271, 1388, 1544, 1614, 1637, 1717, 1867
FaqI GGGAC 2 cut(s) 537, 1420
FatI CATG 9 cut(s) 305, 752, 1267, 1384, 1540, 1610, 1633, 1713, 1863
FbaI TGATCA 2 cut(s) 622, 1171
FblI GTMKAC 2 cut(s) 963, 1813
Fnu4HI GCNGC 6 cut(s) 654, 729, 750, 1117, 1120, 1688
FokI GGATG 5 cut(s) 451, 525, 641, 1118, 1660
FriOI GRGCYC 1 cut(s) 1356
Fsp4HI GCNGC 6 cut(s) 654, 729, 750, 1117, 1120, 1688
FspBI CTAG 8 cut(s) 701, 737, 848, 1190, 1455, 1530, 1908, 1914
GlaI GCGC 3 cut(s) 281, 290, 1076
GluI GCNGC 6 cut(s) 654, 729, 750, 1117, 1120, 1688
GsuI CTGGAG 1 cut(s) 793
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 7 cut(s) 267, 345, 987, 1216, 1708, 1870, 1906
HapII CCGG 2 cut(s) 268, 988
HhaI GCGC 3 cut(s) 282, 291, 1077
Hin1II CATG 9 cut(s) 309, 756, 1271, 1388, 1544, 1614, 1637, 1717, 1867
Hin6I GCGC 3 cut(s) 280, 289, 1075
HinP1I GCGC 3 cut(s) 280, 289, 1075
HincII GTYRAC 2 cut(s) 163, 1423
HindII GTYRAC 2 cut(s) 163, 1423
HinfI GANTC 5 cut(s) 136, 741, 1576, 1607, 1625
HpaII CCGG 2 cut(s) 268, 988
HphI GGTGA 6 cut(s) 877, 1057, 1427, 1802, 1821, 1872
Hpy166II GTNNAC 8 cut(s) 74, 156, 163, 964, 1127, 1205, 1423, 1814
Hpy188I TCNGA 7 cut(s) 172, 186, 492, 844, 1630, 1720, 1921
Hpy188III TCNNGA 7 cut(s) 140, 275, 626, 1289, 1316, 1634, 1766
Hpy8I GTNNAC 8 cut(s) 74, 156, 163, 964, 1127, 1205, 1423, 1814
HpyAV CCTTC 5 cut(s) 121, 579, 629, 845, 1836
HpyCH4III ACNGT 8 cut(s) 10, 160, 167, 926, 961, 1041, 1165, 1595
HpyCH4IV ACGT 5 cut(s) 600, 801, 1030, 1198, 1211
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 277, 286, 288, 581, 653, 1113, 1360, 1670
HpyF3I CTNAG 4 cut(s) 63, 825, 1087, 1719
HpySE526I ACGT 5 cut(s) 600, 801, 1030, 1198, 1211
Hsp92II CATG 9 cut(s) 309, 756, 1271, 1388, 1544, 1614, 1637, 1717, 1867
HspAI GCGC 3 cut(s) 280, 289, 1075
KflI GGGWCCC 1 cut(s) 1407
KroI GCCGGC 1 cut(s) 267
KroNI GCCGGC 1 cut(s) 269
Ksp22I TGATCA 2 cut(s) 622, 1171
Kzo9I GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
LmnI GCTCC 2 cut(s) 277, 1402
Lsp1109I GCAGC 5 cut(s) 665, 740, 761, 1131, 1699
LweI GCATC 2 cut(s) 1294, 1690
MaeI CTAG 8 cut(s) 701, 737, 848, 1190, 1455, 1530, 1908, 1914
MaeII ACGT 5 cut(s) 600, 801, 1030, 1198, 1211
MaeIII GTNAC 6 cut(s) 773, 1270, 1378, 1442, 1891, 1937
MalI GATC 7 cut(s) 191, 241, 423, 624, 1173, 1547, 1632
MboI GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
MfeI CAATTG 1 cut(s) 1653
MflI RGATCY 2 cut(s) 189, 421
MhlI GDGCHC 2 cut(s) 1020, 1356
MlyI GAGTC 3 cut(s) 145, 750, 1634
MmeI TCCRAC 2 cut(s) 217, 1608
Mph1103I ATGCAT 1 cut(s) 1255
MroNI GCCGGC 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 1149
MseI TTAA 8 cut(s) 120, 180, 293, 332, 375, 426, 1335, 1641
MslI CAYNNNNRTG 3 cut(s) 1290, 1539, 1834
MspA1I CMGCKG 1 cut(s) 62
MspI CCGG 2 cut(s) 268, 988
MspR9I CCNGG 5 cut(s) 342, 401, 811, 989, 1413
MunI CAATTG 1 cut(s) 1653
Mva1269I GAATGC 1 cut(s) 149
MvaI CCWGG 4 cut(s) 342, 401, 811, 1413
MwoI GCNNNNNNNGC 9 cut(s) 11, 277, 286, 288, 581, 653, 1113, 1360, 1670
NaeI GCCGGC 1 cut(s) 269
NciI CCSGG 1 cut(s) 989
NdeII GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
NgoMIV GCCGGC 1 cut(s) 267
NlaIII CATG 9 cut(s) 309, 756, 1271, 1388, 1544, 1614, 1637, 1717, 1867
NlaIV GGNNCC 3 cut(s) 218, 1408, 1409
NmuCI GTSAC 2 cut(s) 1378, 1891
NsiI ATGCAT 1 cut(s) 1255
NspI RCATGY 2 cut(s) 309, 756
PaeI GCATGC 1 cut(s) 756
PagI TCATGA 1 cut(s) 1633
PceI AGGCCT 1 cut(s) 1708
PciI ACATGT 1 cut(s) 305
PcsI WCGNNNNNNNCGW 1 cut(s) 1120
PctI GAATGC 1 cut(s) 149
PdiI GCCGGC 1 cut(s) 269
PdmI GAANNNNTTC 1 cut(s) 1149
PfeI GAWTC 2 cut(s) 1576, 1607
PfoI TCCNGGA 1 cut(s) 809
PkrI GCNGC 6 cut(s) 655, 730, 751, 1118, 1121, 1689
PleI GAGTC 3 cut(s) 144, 749, 1633
PmaCI CACGTG 2 cut(s) 601, 1212
PmlI CACGTG 2 cut(s) 601, 1212
PpsI GAGTC 3 cut(s) 144, 749, 1633
Ppu21I YACGTR 2 cut(s) 601, 1212
PpuMI RGGWCCY 1 cut(s) 1407
PscI ACATGT 1 cut(s) 305
Psp5II RGGWCCY 1 cut(s) 1407
Psp6I CCWGG 4 cut(s) 340, 399, 809, 1411
PspCI CACGTG 2 cut(s) 601, 1212
PspGI CCWGG 4 cut(s) 340, 399, 809, 1411
PspN4I GGNNCC 3 cut(s) 218, 1408, 1409
PspPI GGNCC 3 cut(s) 344, 1407, 1917
PspPPI RGGWCCY 1 cut(s) 1407
PsrI GAACNNNNNNTAC 2 cut(s) 1188, 1220
PstI CTGCAG 1 cut(s) 440
PstNI CAGNNNCTG 1 cut(s) 1941
PsuI RGATCY 2 cut(s) 189, 421
RsaI GTAC 2 cut(s) 804, 1013
RsaNI GTAC 2 cut(s) 803, 1012
RseI CAYNNNNRTG 3 cut(s) 1290, 1539, 1834
SaqAI TTAA 8 cut(s) 120, 180, 293, 332, 375, 426, 1335, 1641
SatI GCNGC 6 cut(s) 654, 729, 750, 1117, 1120, 1688
Sau3AI GATC 7 cut(s) 189, 239, 421, 622, 1171, 1545, 1630
Sau96I GGNCC 3 cut(s) 344, 1407, 1917
SbfI CCTGCAGG 1 cut(s) 440
SchI GAGTC 3 cut(s) 145, 750, 1634
ScrFI CCNGG 5 cut(s) 342, 401, 811, 989, 1413
SdaI CCTGCAGG 1 cut(s) 440
SduI GDGCHC 2 cut(s) 1020, 1356
SfaNI GCATC 2 cut(s) 1294, 1690
SfcI CTRYAG 2 cut(s) 436, 562
SinI GGWCC 2 cut(s) 1407, 1917
SmiMI CAYNNNNRTG 3 cut(s) 1290, 1539, 1834
SpeI ACTAGT 1 cut(s) 1454
SphI GCATGC 1 cut(s) 756
Sse8387I CCTGCAGG 1 cut(s) 440
SseBI AGGCCT 1 cut(s) 1708
SsiI CCGC 3 cut(s) 60, 147, 1117
SspMI CTAG 8 cut(s) 701, 737, 848, 1190, 1455, 1530, 1908, 1914
StuI AGGCCT 1 cut(s) 1708
StyD4I CCNGG 5 cut(s) 340, 399, 809, 987, 1411
StyI CCWWGG 1 cut(s) 736
TaaI ACNGT 8 cut(s) 10, 160, 167, 926, 961, 1041, 1165, 1595
TaiI ACGT 5 cut(s) 603, 804, 1033, 1201, 1214
TaqII GACCGA 1 cut(s) 868
TauI GCSGC 1 cut(s) 1119
TfiI GAWTC 2 cut(s) 1576, 1607
Tru1I TTAA 8 cut(s) 120, 180, 293, 332, 375, 426, 1335, 1641
Tru9I TTAA 8 cut(s) 120, 180, 293, 332, 375, 426, 1335, 1641
TscAI CASTG 6 cut(s) 163, 931, 1168, 1445, 1600, 1665
TseFI GTSAC 2 cut(s) 1378, 1891
TseI GCWGC 5 cut(s) 653, 728, 749, 1119, 1687
Tsp45I GTSAC 2 cut(s) 1378, 1891
TspDTI ATGAA 5 cut(s) 1061, 1065, 1158, 1599, 1650
TspGWI ACGGA 2 cut(s) 238, 1879
TspRI CASTG 6 cut(s) 163, 931, 1168, 1445, 1600, 1665
VpaK11BI GGWCC 2 cut(s) 1407, 1917
XapI RAATTY 3 cut(s) 587, 1059, 1771
XceI RCATGY 2 cut(s) 309, 756
XcmI CCANNNNNNNNNTGG 1 cut(s) 200
XmaJI CCTAGG 1 cut(s) 736
XmiI GTMKAC 2 cut(s) 963, 1813
XmnI GAANNNNTTC 1 cut(s) 1149
XspI CTAG 8 cut(s) 701, 737, 848, 1190, 1455, 1530, 1908, 1914
Zsp2I ATGCAT 1 cut(s) 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.