Rorug04G0357200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0014338
Physical Location & Seq
Forward (+)
52936595 .. 52939317
2723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0357200.1

Sequence Viewer

Length: 1935 bp
ATGGCTCCTTTCACTTTGTTTATTTCATTTCTTCTCACTAATCTTGCTGTTCTTCACTCTGCTGAAGAACAGAAAATCCACACACTTTGTCCCCCCAACTACTTTTGTAATGATCAAATAGGCAACATCTCTTTCCCCTTCAGGGATAATAAGGTCGACCATCCTCCTGAATGCGGATTGTATTCTGTTGATTGTCGTTCCGAACCTCCGAAGATCCAACTCAAAGAGGGCGGATACTGGTATGAATTTGAAAGCATCTCTAACAATAATATTTCGATCATCATCAACAAAGACCTTCAGCAGCGCTTAGAAAGAGTTCTTTGCGAGGATGAAAGTTTCAACGATTTTAGTCTTCCCAGTAATGTGTCCGTCATATCCGATCCGATCCTGTTAAAATGCAGTCACAACCTGAACACAACTGATAGGGATCTTAGACTCGGCTGCAGTAGTCCTTTCCATACTTACGATTATTATATTTATCCCAAGTATATACCGAGTCCGCCGCCAAATTGTTCAGTTGTTCAGCTCCCCCCCATTCCGCGTTGGAATATTTCGAATCAGCCTCACTCTATCCCCTCTACTAAATGCACCCTGCACGTGACAGTACCCGAAGAATGTTCTGAATGCAATTCTACAGGACTCATATGCCGGGCATACGAGGGAGAACCTAAATGTTTCATTGCACCAAAAGGAGGAAACTTGAAGTTGAAGCTAGGACTAGGTATCGGACTTGGAGTACCAACACTTCTTGCAGCATGCTTCTTTATTCTGTGGTGTTACAGACAAAAATGTGCTTCTTTAAACTTGGTATTATCAAGGAACATTTCAAATTCAGACCCAGAAGGGCGCAGTGTCTCCTTTGGTGTTTCAGTCTTCACCTACAAAGAACTTGAGGAAGCAACTAATCATTTTGATAGTGAAAAAGAAATTGGAGATGGAGGTTTTGGAATTGTATACCATGGCAAACTTAAAGATGGCCGAGAAGTTGCAGTCAAGCGATTATACGAGCACAATTACAGACGTGCAGAACAATTTATGAATGAAATTGAGATTCTTACCCATCTGCGCCACAAAAATTTAGTCACCCTGTATGGATGTACTTCACGCCACAGCCGTGATCTCCTTCTTGTCTACGAGTACATTGCCAATGGCACTGTTGCTGATCATCTCCATGGAGACCGAGCTGCCACAGGCTCACTCCCCTGGCCTATTCGCATGAGCATTGCCAAAGAAACTGCAAGCGCATTGTGTTACCTACATGCTTCTGATATAGTACACCGAGATGTGAAGACTACCAACATTCTCCTGGACGAAAACTTTTGTGTAAAAGTTGCGGATTTTGGGATCTCTCGCCTCTTCCCCCTTAATGCCACTCATGTCTCAACTGCTCCACAGGGGACCCCTGGTTATGTTGATCCAGAGTATCACGAATGCTACCAGCTAACTCCCAAGAGCGATGTTTATAGTTTTGGGGTTGTTCTCATTGAGCTTATATCATCTTTACCAGCAGTTGATATAACAAGGCATAGGGATGAAATCAATCTGTCTAACATAGCAATAAACAAGATTCAAAATGGCTTATACTGTGAGCTGGTGGATTCATGTCTTGGTTTTGAGTCAGATCCTGAAGTTAAGAGGATGACAATTGCAGTAGCAGAGTTGGCTTTCCAATGTTTGCAGCAAGACAATGATGCAAGGCCTACCATGTCTGAGGTTTTGGAAACTTTGCAGATGATTGAAAGTGGAAAAGATGTACCAAAGAATCTAAATCCAGCATTCTGTGATCCAGGGATGGGAGAGAGTATCCAGCCATCTCCTTCACCAGATTGTGACCAGATTGGGTCGTTGAAGAACACGAAGGCACAATCTTCACCAAATTCCGTGATGGAAAAATGGTCTAGCACTAGGTCTACTACACCTAATGCCAGTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

644

Amino Acids

71.88

Weight (kDa)

5.53

Isoelectric Point (pI)

52.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 305 - 574 1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 307 - 576 1.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014338)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69980
fragaria_vesca FvH4_4g35380 FvH4_4g35380
malus_domestica MD16G1083100.v1.1
prunus_persica Prupe.1G262900_v2.0.a1 Prupe.1G262900_v2.0.a1
pyrus_communis pycom16g07200
rosa_chinensis RchiOBHm_Chr4g0444991
rosa_laevigata RLG00000005779
rosa_multiflora Rmu_ssc0000285.1_g000002
rosa_roxburghii Rroxscaffold_5G00385500
rosa_rugosa Rorug04G0357100 Rorug04G0357200
rosa_samantha Rh4AG419000 Rh4BG430700 Rh4DG426600
rosa_wichuraiana Rw4G035870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 156, 954, 1131, 1910
AccII CGCG 1 cut(s) 541
AciI CCGC 6 cut(s) 174, 231, 500, 503, 539, 1334
AclWI GGATC 8 cut(s) 208, 374, 379, 435, 1352, 1409, 1616, 1778
AcoI YGGCCR 1 cut(s) 976
AcsI RAATTY 4 cut(s) 245, 829, 1075, 1876
AcuI CTGAAG 4 cut(s) 84, 124, 281, 1647
AcvI CACGTG 1 cut(s) 598
AfaI GTAC 6 cut(s) 606, 738, 1099, 1139, 1275, 1755
AfeI AGCGCT 1 cut(s) 305
AfiI CCNNNNNNNGG 4 cut(s) 142, 173, 692, 1793
AgsI TTSAA 8 cut(s) 251, 340, 703, 709, 828, 1571, 1739, 1849
AjiI CACGTC 1 cut(s) 1022
AjnI CCWGG 4 cut(s) 1202, 1305, 1402, 1786
AjuI GAANNNNNNNTTGG 2 cut(s) 912, 944
AleI CACNNNNGTG 1 cut(s) 1113
AloI GAACNNNNNNTCC 2 cut(s) 60, 92
AluBI AGCT 6 cut(s) 526, 712, 1184, 1441, 1489, 1591
AluI AGCT 6 cut(s) 526, 712, 1184, 1441, 1489, 1591
Alw21I GWGCWC 1 cut(s) 1011
Alw26I GTCTC 3 cut(s) 859, 1170, 1384
AlwI GGATC 8 cut(s) 208, 374, 379, 435, 1352, 1409, 1616, 1778
AlwNI CAGNNNCTG 2 cut(s) 1625, 1932
Aor51HI AGCGCT 1 cut(s) 305
AoxI GGCC 3 cut(s) 976, 1205, 1697
ApeKI GCWGC 5 cut(s) 301, 441, 752, 1184, 1678
ApoI RAATTY 4 cut(s) 245, 829, 1075, 1876
ArsI GACNNNNNNTTYG 2 cut(s) 1065, 1097
Asp700I GAANNNNTTC 1 cut(s) 315
AspLEI GCGC 4 cut(s) 306, 849, 1068, 1244
AspS9I GGNCC 1 cut(s) 1398
AsuC2I CCSGG 1 cut(s) 650
AsuHPI GGTGA 4 cut(s) 868, 1075, 1812, 1863
AsuII TTCGAA 1 cut(s) 554
AvaII GGWCC 1 cut(s) 1398
BarI GAAGNNNNNNTAC 2 cut(s) 729, 761
BbrPI CACGTG 1 cut(s) 598
BbsI GAAGAC 3 cut(s) 344, 865, 1295
Bbv12I GWGCWC 1 cut(s) 1011
BbvI GCAGC 5 cut(s) 313, 428, 764, 1171, 1690
BccI CCATC 7 cut(s) 168, 929, 968, 1068, 1786, 1819, 1879
BceAI ACGGC 1 cut(s) 1098
BcgI CGANNNNNNTGC 2 cut(s) 1124, 1158
BciT130I CCWGG 4 cut(s) 1204, 1307, 1404, 1788
BciVI GTATCC 2 cut(s) 227, 1814
BclI TGATCA 2 cut(s) 112, 1162
BcnI CCSGG 1 cut(s) 650
BcoDI GTCTC 3 cut(s) 859, 1170, 1384
BfaI CTAG 4 cut(s) 713, 719, 1899, 1905
BfmI CTRYAG 2 cut(s) 442, 633
BfoI RGCGCY 1 cut(s) 307
BfuI GTATCC 2 cut(s) 227, 1814
BisI GCNGC 6 cut(s) 302, 442, 503, 753, 1185, 1679
BlsI GCNGC 6 cut(s) 303, 443, 504, 754, 1186, 1680
Bme1390I CCNGG 5 cut(s) 650, 1204, 1307, 1404, 1788
Bme18I GGWCC 1 cut(s) 1398
BmgBI CACGTC 1 cut(s) 1022
BmgT120I GGNCC 1 cut(s) 1398
BmiI GGNNCC 3 cut(s) 6, 1399, 1400
BmrFI CCNGG 5 cut(s) 650, 1204, 1307, 1404, 1788
BmrI ACTGGG 1 cut(s) 351
BmsI GCATC 2 cut(s) 264, 1681
BmuI ACTGGG 1 cut(s) 351
BpiI GAAGAC 3 cut(s) 344, 865, 1295
Bpu14I TTCGAA 1 cut(s) 554
BpuEI CTTGAG 1 cut(s) 911
BpuMI CCSGG 1 cut(s) 650
BsaAI YACGTR 1 cut(s) 598
BsaBI GATNNNNATC 2 cut(s) 281, 426
BsaI GGTCTC 1 cut(s) 1170
BsaJI CCNNGG 5 cut(s) 958, 1171, 1202, 1402, 1787
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 173, 692, 1793
Bse1I ACTGG 3 cut(s) 242, 357, 1926
Bse3DI GCAATG 3 cut(s) 678, 1140, 1221
Bse8I GATNNNNATC 2 cut(s) 281, 426
BseBI CCWGG 4 cut(s) 1204, 1307, 1404, 1788
BseDI CCNNGG 5 cut(s) 958, 1171, 1202, 1402, 1787
BseGI GGATG 6 cut(s) 160, 334, 1100, 1537, 1644, 1797
BseJI GATNNNNATC 2 cut(s) 281, 426
BseLI CCNNNNNNNGG 4 cut(s) 142, 173, 692, 1793
BseMI GCAATG 3 cut(s) 678, 1140, 1221
BseMII CTCAG 1 cut(s) 1701
BseNI ACTGG 3 cut(s) 242, 357, 1926
BseXI GCAGC 5 cut(s) 313, 428, 764, 1171, 1690
BsgI GTGCAG 2 cut(s) 578, 1044
Bsh1236I CGCG 1 cut(s) 541
BshFI GGCC 3 cut(s) 978, 1207, 1699
BsiHKAI GWGCWC 1 cut(s) 1011
BsiSI CCGG 1 cut(s) 649
BslFI GGGAC 2 cut(s) 75, 1411
BslI CCNNNNNNNGG 4 cut(s) 142, 173, 692, 1793
BsmAI GTCTC 3 cut(s) 859, 1170, 1384
BsmFI GGGAC 2 cut(s) 75, 1411
BsmI GAATGC 4 cut(s) 176, 629, 1436, 1775
BsnI GGCC 3 cut(s) 978, 1207, 1699
Bso31I GGTCTC 1 cut(s) 1170
Bsp119I TTCGAA 1 cut(s) 554
Bsp1286I GDGCHC 1 cut(s) 1011
Bsp19I CCATGG 2 cut(s) 958, 1171
BspACI CCGC 6 cut(s) 174, 231, 500, 503, 539, 1334
BspANI GGCC 3 cut(s) 978, 1207, 1699
BspCNI CTCAG 1 cut(s) 1702
BspFNI CGCG 1 cut(s) 541
BspLI GGNNCC 3 cut(s) 6, 1399, 1400
BspMAI CTGCAG 1 cut(s) 446
BspPI GGATC 8 cut(s) 208, 374, 379, 435, 1352, 1409, 1616, 1778
BspT104I TTCGAA 1 cut(s) 554
BspTNI GGTCTC 1 cut(s) 1170
BsrDI GCAATG 3 cut(s) 678, 1140, 1221
BsrI ACTGG 3 cut(s) 242, 357, 1926
BssECI CCNNGG 5 cut(s) 958, 1171, 1202, 1402, 1787
BssNAI GTATAC 1 cut(s) 955
BssT1I CCWWGG 2 cut(s) 958, 1171
Bst1107I GTATAC 1 cut(s) 955
Bst2UI CCWGG 4 cut(s) 1204, 1307, 1404, 1788
Bst4CI ACNGT 3 cut(s) 604, 1156, 1586
Bst6I CTCTTC 1 cut(s) 1361
BstBAI YACGTR 1 cut(s) 598
BstBI TTCGAA 1 cut(s) 554
BstC8I GCNNGC 2 cut(s) 757, 1240
BstDEI CTNAG 3 cut(s) 307, 431, 1710
BstDSI CCRYGG 2 cut(s) 958, 1171
BstF5I GGATG 6 cut(s) 160, 334, 1100, 1537, 1644, 1797
BstFNI CGCG 1 cut(s) 541
BstH2I RGCGCY 1 cut(s) 307
BstHHI GCGC 4 cut(s) 306, 849, 1068, 1244
BstMAI GTCTC 3 cut(s) 859, 1170, 1384
BstMWI GCNNNNNNNGC 1 cut(s) 1661
BstNI CCWGG 4 cut(s) 1204, 1307, 1404, 1788
BstNSI RCATGY 2 cut(s) 759, 1262
BstSCI CCNGG 5 cut(s) 648, 1202, 1305, 1402, 1786
BstSFI CTRYAG 2 cut(s) 442, 633
BstUI CGCG 1 cut(s) 541
BstV1I GCAGC 5 cut(s) 313, 428, 764, 1171, 1690
BstV2I GAAGAC 3 cut(s) 344, 865, 1295
BstX2I RGATCY 4 cut(s) 213, 427, 1344, 1621
BstYI RGATCY 4 cut(s) 213, 427, 1344, 1621
BstZ17I GTATAC 1 cut(s) 955
BsuI GTATCC 2 cut(s) 227, 1814
BsuRI GGCC 3 cut(s) 978, 1207, 1699
BtgI CCRYGG 2 cut(s) 958, 1171
BtgZI GCGATG 1 cut(s) 1470
BtrI CACGTC 1 cut(s) 1022
BtsCI GGATG 6 cut(s) 160, 334, 1100, 1537, 1644, 1797
BtsI GCAGTG 1 cut(s) 856
BtsIMutI CAGTG 3 cut(s) 856, 1152, 1933
Cac8I GCNNGC 2 cut(s) 757, 1240
CaiI CAGNNNCTG 2 cut(s) 1625, 1932
CfoI GCGC 4 cut(s) 306, 849, 1068, 1244
Cfr13I GGNCC 1 cut(s) 1398
Csp6I GTAC 6 cut(s) 605, 737, 1098, 1138, 1274, 1754
CspCI CAANNNNNGTGG 2 cut(s) 68, 103
CviAII CATG 8 cut(s) 756, 959, 1172, 1216, 1259, 1376, 1602, 1705
CviQI GTAC 6 cut(s) 605, 737, 1098, 1138, 1274, 1754
DdeI CTNAG 3 cut(s) 307, 431, 1710
DraI TTTAAA 1 cut(s) 801
EaeI YGGCCR 1 cut(s) 976
Eam1104I CTCTTC 1 cut(s) 1361
EarI CTCTTC 1 cut(s) 1361
EciI GGCGGA 2 cut(s) 246, 489
Eco130I CCWWGG 2 cut(s) 958, 1171
Eco147I AGGCCT 1 cut(s) 1699
Eco31I GGTCTC 1 cut(s) 1170
Eco47I GGWCC 1 cut(s) 1398
Eco47III AGCGCT 1 cut(s) 305
Eco57I CTGAAG 4 cut(s) 84, 124, 281, 1647
Eco72I CACGTG 1 cut(s) 598
EcoO109I RGGNCCY 1 cut(s) 1398
EcoRII CCWGG 4 cut(s) 1202, 1305, 1402, 1786
EcoT14I CCWWGG 2 cut(s) 958, 1171
ErhI CCWWGG 2 cut(s) 958, 1171
FaeI CATG 8 cut(s) 759, 962, 1175, 1219, 1262, 1379, 1605, 1708
FaqI GGGAC 2 cut(s) 75, 1411
FatI CATG 8 cut(s) 755, 958, 1171, 1215, 1258, 1375, 1601, 1704
FauNDI CATATG 1 cut(s) 644
FbaI TGATCA 2 cut(s) 112, 1162
FblI GTMKAC 4 cut(s) 156, 954, 1131, 1910
Fnu4HI GCNGC 6 cut(s) 302, 442, 503, 753, 1185, 1679
FokI GGATG 6 cut(s) 147, 341, 1107, 1544, 1651, 1804
Fsp4HI GCNGC 6 cut(s) 302, 442, 503, 753, 1185, 1679
FspBI CTAG 4 cut(s) 713, 719, 1899, 1905
GlaI GCGC 4 cut(s) 305, 848, 1067, 1243
GluI GCNGC 6 cut(s) 302, 442, 503, 753, 1185, 1679
HaeII RGCGCY 1 cut(s) 307
HaeIII GGCC 3 cut(s) 978, 1207, 1699
HapII CCGG 1 cut(s) 649
HhaI GCGC 4 cut(s) 306, 849, 1068, 1244
Hin1II CATG 8 cut(s) 759, 962, 1175, 1219, 1262, 1379, 1605, 1708
Hin6I GCGC 4 cut(s) 304, 847, 1066, 1242
HinP1I GCGC 4 cut(s) 304, 847, 1066, 1242
HincII GTYRAC 1 cut(s) 157
HindII GTYRAC 1 cut(s) 157
HinfI GANTC 9 cut(s) 435, 496, 556, 639, 1051, 1567, 1598, 1616, 1762
HpaII CCGG 1 cut(s) 649
HphI GGTGA 4 cut(s) 868, 1075, 1812, 1863
Hpy166II GTNNAC 5 cut(s) 157, 955, 1132, 1276, 1911
Hpy188III TCNNGA 4 cut(s) 167, 1418, 1427, 1625
Hpy8I GTNNAC 5 cut(s) 157, 955, 1132, 1276, 1911
HpyAV CCTTC 6 cut(s) 148, 305, 836, 1133, 1827, 1852
HpyCH4III ACNGT 3 cut(s) 604, 1156, 1586
HpyCH4IV ACGT 2 cut(s) 597, 1021
HpyF10VI GCNNNNNNNGC 1 cut(s) 1661
HpyF3I CTNAG 3 cut(s) 307, 431, 1710
HpySE526I ACGT 2 cut(s) 597, 1021
Hsp92II CATG 8 cut(s) 759, 962, 1175, 1219, 1262, 1379, 1605, 1708
HspAI GCGC 4 cut(s) 304, 847, 1066, 1242
KflI GGGWCCC 1 cut(s) 1398
Ksp22I TGATCA 2 cut(s) 112, 1162
LmnI GCTCC 3 cut(s) 10, 531, 1393
Lsp1109I GCAGC 5 cut(s) 313, 428, 764, 1171, 1690
LweI GCATC 2 cut(s) 264, 1681
MaeI CTAG 4 cut(s) 713, 719, 1899, 1905
MaeII ACGT 2 cut(s) 597, 1021
MaeIII GTNAC 6 cut(s) 401, 598, 776, 1081, 1250, 1829
MfeI CAATTG 1 cut(s) 1644
MflI RGATCY 4 cut(s) 213, 427, 1344, 1621
MhlI GDGCHC 1 cut(s) 1011
MlyI GAGTC 4 cut(s) 429, 505, 633, 1625
MmeI TCCRAC 2 cut(s) 241, 524
MroXI GAANNNNTTC 1 cut(s) 315
MseI TTAA 5 cut(s) 392, 800, 969, 1365, 1632
MslI CAYNNNNRTG 4 cut(s) 1113, 1170, 1281, 1530
MspI CCGG 1 cut(s) 649
MspR9I CCNGG 5 cut(s) 650, 1204, 1307, 1404, 1788
MunI CAATTG 1 cut(s) 1644
Mva1269I GAATGC 4 cut(s) 176, 629, 1436, 1775
MvaI CCWGG 4 cut(s) 1204, 1307, 1404, 1788
MvnI CGCG 1 cut(s) 541
MwoI GCNNNNNNNGC 1 cut(s) 1661
NciI CCSGG 1 cut(s) 650
NcoI CCATGG 2 cut(s) 958, 1171
NdeI CATATG 1 cut(s) 644
NlaIII CATG 8 cut(s) 759, 962, 1175, 1219, 1262, 1379, 1605, 1708
NlaIV GGNNCC 3 cut(s) 6, 1399, 1400
NmeAIII GCCGAG 2 cut(s) 417, 1004
NmuCI GTSAC 4 cut(s) 401, 598, 1081, 1829
NspI RCATGY 2 cut(s) 759, 1262
NspV TTCGAA 1 cut(s) 554
OliI CACNNNNGTG 1 cut(s) 1113
PaeI GCATGC 1 cut(s) 759
PceI AGGCCT 1 cut(s) 1699
PcsI WCGNNNNNNNCGW 1 cut(s) 1111
PctI GAATGC 4 cut(s) 176, 629, 1436, 1775
PdmI GAANNNNTTC 1 cut(s) 315
PfeI GAWTC 5 cut(s) 556, 1051, 1567, 1598, 1762
PfoI TCCNGGA 1 cut(s) 1305
PkrI GCNGC 6 cut(s) 303, 443, 504, 754, 1186, 1680
PleI GAGTC 4 cut(s) 429, 504, 633, 1624
PmaCI CACGTG 1 cut(s) 598
PmlI CACGTG 1 cut(s) 598
PpsI GAGTC 4 cut(s) 429, 504, 633, 1624
Ppu21I YACGTR 1 cut(s) 598
PpuMI RGGWCCY 1 cut(s) 1398
Psp5II RGGWCCY 1 cut(s) 1398
Psp6I CCWGG 4 cut(s) 1202, 1305, 1402, 1786
PspCI CACGTG 1 cut(s) 598
PspGI CCWGG 4 cut(s) 1202, 1305, 1402, 1786
PspN4I GGNNCC 3 cut(s) 6, 1399, 1400
PspPI GGNCC 1 cut(s) 1398
PspPPI RGGWCCY 1 cut(s) 1398
PstI CTGCAG 1 cut(s) 446
PstNI CAGNNNCTG 2 cut(s) 1625, 1932
PsuI RGATCY 4 cut(s) 213, 427, 1344, 1621
RsaI GTAC 6 cut(s) 606, 738, 1099, 1139, 1275, 1755
RsaNI GTAC 6 cut(s) 605, 737, 1098, 1138, 1274, 1754
RseI CAYNNNNRTG 4 cut(s) 1113, 1170, 1281, 1530
SalI GTCGAC 1 cut(s) 155
SaqAI TTAA 5 cut(s) 392, 800, 969, 1365, 1632
SatI GCNGC 6 cut(s) 302, 442, 503, 753, 1185, 1679
Sau96I GGNCC 1 cut(s) 1398
SchI GAGTC 4 cut(s) 429, 505, 633, 1625
ScrFI CCNGG 5 cut(s) 650, 1204, 1307, 1404, 1788
SduI GDGCHC 1 cut(s) 1011
SfaNI GCATC 2 cut(s) 264, 1681
SfcI CTRYAG 2 cut(s) 442, 633
SfuI TTCGAA 1 cut(s) 554
SinI GGWCC 1 cut(s) 1398
SmiMI CAYNNNNRTG 4 cut(s) 1113, 1170, 1281, 1530
SmlI CTYRAG 1 cut(s) 890
SmoI CTYRAG 1 cut(s) 890
SphI GCATGC 1 cut(s) 759
SseBI AGGCCT 1 cut(s) 1699
SsiI CCGC 6 cut(s) 174, 231, 500, 503, 539, 1334
SspI AATATT 2 cut(s) 271, 550
SspMI CTAG 4 cut(s) 713, 719, 1899, 1905
StuI AGGCCT 1 cut(s) 1699
StyD4I CCNGG 5 cut(s) 648, 1202, 1305, 1402, 1786
StyI CCWWGG 2 cut(s) 958, 1171
TaaI ACNGT 3 cut(s) 604, 1156, 1586
TaiI ACGT 2 cut(s) 600, 1024
TaqI TCGA 3 cut(s) 156, 275, 554
TaqII GACCGA 1 cut(s) 1194
TatI WGTACW 3 cut(s) 1097, 1137, 1273
TauI GCSGC 1 cut(s) 505
TfiI GAWTC 5 cut(s) 556, 1051, 1567, 1598, 1762
Tru1I TTAA 5 cut(s) 392, 800, 969, 1365, 1632
Tru9I TTAA 5 cut(s) 392, 800, 969, 1365, 1632
TscAI CASTG 3 cut(s) 856, 1159, 1933
TseFI GTSAC 4 cut(s) 401, 598, 1081, 1829
TseI GCWGC 5 cut(s) 301, 441, 752, 1184, 1678
Tsp45I GTSAC 4 cut(s) 401, 598, 1081, 1829
TspDTI ATGAA 8 cut(s) 15, 258, 345, 667, 1052, 1056, 1548, 1590
TspGWI ACGGA 2 cut(s) 358, 1870
TspRI CASTG 3 cut(s) 856, 1159, 1933
VpaK11BI GGWCC 1 cut(s) 1398
XapI RAATTY 4 cut(s) 245, 829, 1075, 1876
XceI RCATGY 2 cut(s) 759, 1262
XcmI CCANNNNNNNNNTGG 1 cut(s) 1303
XmiI GTMKAC 4 cut(s) 156, 954, 1131, 1910
XmnI GAANNNNTTC 1 cut(s) 315
XspI CTAG 4 cut(s) 713, 719, 1899, 1905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.