Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02150 AT2G02150 |
| fragaria_vesca | FvH4_4g36310 FvH4_4g36310 |
| malus_domestica | MD13G1010200.v1.1 |
| prunus_persica | Prupe.1G342600_v2.0.a1 |
| pyrus_communis | pycom13g00850 |
| rosa_chinensis | RchiOBHm_Chr4g0446071 |
| rosa_laevigata | RLG00000005694 |
| rosa_multiflora | Rmu_sc0007511.1_g000004 Rmu_sc0013085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00386480 |
| rosa_rugosa | Rorug04G0366900 Rorug04G0367000 Rorug04G0367100 |
| rosa_samantha | Rh4AG429200 Rh4BG438700 Rh4CG456000 Rh4DG436900 |
| rosa_wichuraiana | Rw4G036670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 53 |
| AcsI | RAATTY | 1 cut(s) | 109 |
| AfaI | GTAC | 1 cut(s) | 321 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 73 |
| AgsI | TTSAA | 2 cut(s) | 26, 156 |
| AluBI | AGCT | 1 cut(s) | 20 |
| AluI | AGCT | 1 cut(s) | 20 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Aor13HI | TCCGGA | 1 cut(s) | 53 |
| AoxI | GGCC | 1 cut(s) | 202 |
| ApoI | RAATTY | 1 cut(s) | 109 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 151 |
| AsuHPI | GGTGA | 1 cut(s) | 228 |
| BanII | GRGCYC | 1 cut(s) | 16 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BccI | CCATC | 1 cut(s) | 239 |
| BfaI | CTAG | 1 cut(s) | 17 |
| BmrI | ACTGGG | 1 cut(s) | 35 |
| BmuI | ACTGGG | 1 cut(s) | 35 |
| BoxI | GACNNNNGTC | 1 cut(s) | 254 |
| BsaAI | YACGTR | 1 cut(s) | 319 |
| BsaWI | WCCGGW | 1 cut(s) | 53 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 73 |
| Bse1I | ACTGG | 1 cut(s) | 41 |
| BseAI | TCCGGA | 1 cut(s) | 53 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BseNI | ACTGG | 1 cut(s) | 41 |
| BshFI | GGCC | 1 cut(s) | 204 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BsnI | GGCC | 1 cut(s) | 204 |
| Bsp1286I | GDGCHC | 2 cut(s) | 16, 61 |
| Bsp13I | TCCGGA | 1 cut(s) | 53 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspANI | GGCC | 1 cut(s) | 204 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BspEI | TCCGGA | 1 cut(s) | 53 |
| BsrI | ACTGG | 1 cut(s) | 41 |
| BssMI | GATC | 1 cut(s) | 130 |
| Bst6I | CTCTTC | 1 cut(s) | 68 |
| BstBAI | YACGTR | 1 cut(s) | 319 |
| BstDEI | CTNAG | 2 cut(s) | 72, 281 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 349 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 254 |
| BsuRI | GGCC | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 69 |
| Csp6I | GTAC | 1 cut(s) | 320 |
| CviAII | CATG | 1 cut(s) | 259 |
| CviJI | RGCY | 4 cut(s) | 14, 20, 204, 343 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 20, 204, 343 |
| CviQI | GTAC | 1 cut(s) | 320 |
| DdeI | CTNAG | 2 cut(s) | 72, 281 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 68 |
| EarI | CTCTTC | 1 cut(s) | 68 |
| Eco24I | GRGCYC | 1 cut(s) | 16 |
| EcoT38I | GRGCYC | 1 cut(s) | 16 |
| FaeI | CATG | 1 cut(s) | 262 |
| FaiI | YATR | 5 cut(s) | 200, 207, 211, 213, 260 |
| FatI | CATG | 1 cut(s) | 258 |
| FriOI | GRGCYC | 1 cut(s) | 16 |
| FspBI | CTAG | 1 cut(s) | 17 |
| HaeIII | GGCC | 1 cut(s) | 204 |
| HapII | CCGG | 1 cut(s) | 54 |
| Hin1II | CATG | 1 cut(s) | 262 |
| HincII | GTYRAC | 1 cut(s) | 121 |
| HindII | GTYRAC | 1 cut(s) | 121 |
| HpaI | GTTAAC | 1 cut(s) | 121 |
| HpaII | CCGG | 1 cut(s) | 54 |
| HphI | GGTGA | 1 cut(s) | 228 |
| Hpy166II | GTNNAC | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 2 cut(s) | 54, 156 |
| Hpy8I | GTNNAC | 1 cut(s) | 121 |
| HpyAV | CCTTC | 1 cut(s) | 312 |
| HpyCH4IV | ACGT | 1 cut(s) | 318 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 349 |
| HpyF3I | CTNAG | 2 cut(s) | 72, 281 |
| HpySE526I | ACGT | 1 cut(s) | 318 |
| Hsp92II | CATG | 1 cut(s) | 262 |
| Kpn2I | TCCGGA | 1 cut(s) | 53 |
| KspAI | GTTAAC | 1 cut(s) | 121 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LmnI | GCTCC | 2 cut(s) | 56, 263 |
| LpnPI | CCDG | 5 cut(s) | 54, 67, 173, 252, 252 |
| MaeI | CTAG | 1 cut(s) | 17 |
| MaeII | ACGT | 1 cut(s) | 318 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 3 cut(s) | 38, 55, 112 |
| MfeI | CAATTG | 1 cut(s) | 252 |
| MhlI | GDGCHC | 2 cut(s) | 16, 61 |
| MluCI | AATT | 4 cut(s) | 81, 109, 252, 330 |
| MnlI | CCTC | 2 cut(s) | 3, 67 |
| MroI | TCCGGA | 1 cut(s) | 53 |
| MroXI | GAANNNNTTC | 1 cut(s) | 151 |
| MseI | TTAA | 1 cut(s) | 120 |
| MspI | CCGG | 1 cut(s) | 54 |
| MunI | CAATTG | 1 cut(s) | 252 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 349 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 262 |
| PdmI | GAANNNNTTC | 1 cut(s) | 151 |
| Ppu21I | YACGTR | 1 cut(s) | 319 |
| PshAI | GACNNNNGTC | 1 cut(s) | 254 |
| RsaI | GTAC | 1 cut(s) | 321 |
| RsaNI | GTAC | 1 cut(s) | 320 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| SduI | GDGCHC | 2 cut(s) | 16, 61 |
| SetI | ASST | 4 cut(s) | 22, 241, 287, 321 |
| Sse9I | AATT | 4 cut(s) | 81, 109, 252, 330 |
| SspMI | CTAG | 1 cut(s) | 17 |
| TaiI | ACGT | 1 cut(s) | 321 |
| TaqI | TCGA | 2 cut(s) | 87, 129 |
| TasI | AATT | 4 cut(s) | 81, 109, 252, 330 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TspDTI | ATGAA | 2 cut(s) | 187, 288 |
| TspGWI | ACGGA | 1 cut(s) | 258 |
| TspRI | CASTG | 1 cut(s) | 76 |
| XapI | RAATTY | 1 cut(s) | 109 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 336 |
| XmnI | GAANNNNTTC | 1 cut(s) | 151 |
| XspI | CTAG | 1 cut(s) | 17 |