Rorug05G0246800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0015766
Physical Location & Seq
Forward (+)
26563719 .. 26565450
1732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0246800.1

Sequence Viewer

Length: 1071 bp
ATGTCGACGAGTTGGAGCAACAACTGGTTACTCTCTCTCAAGATCGTGCTGATCTCCACCGGCGTCGTCTCCATGGCCGTCGCACTGAAGCTCTCGGTTCCGGTGGCCGCGGACCTCGTCGCCTCGCAAGTGCCTTCTCTATGGAGCTCTCTGCTCTCTTGGCTCACACCTCCTTACCTCTACATCCTCATCAACTGCATCATCATCAGCATCGTCGCCTCCTCCAAGCTCCATAATCCAAAATCCGAAGATACTCACGATTCCGAAACTATTCCGCCGCCGGCGGAGATGGTAGCCGTCCCTCCGGTATCGACGGTGAAGATCCCCGCCGCGGAAGTGAGGCCTGAGTACACAGCCTACAACGGCGTCGCTCTGAGCGAGTACGGTTACGATTCCAATGTGTTGCCGGAGGTTTCCGATTCGTACGGAGATGCAGCGGCGGTTGAGACCGTTGAGGATTTGAACGCGGAGCCGGAGAAGGAGAGGAGTGAGGTTCTTAACGTCGGTGATGACGCCGCCGCCGCCGCCGCCGCCGCATCCAGGCCTGCACGGAGTGGTTTGCAGAGGAAGGATTCCATGGAGTTTTGGCTGAATGAGAACCAGAGGCCACCGGTTTCTGCTAGATTCGCTCACAGAAAAGCTAGTCCTGAAGGAGGGAGGTCGTTGGGAGTGTCGAAGCCGAAGAGGCACGACACGCTGGAGAGCACGTGGAAGACGATAACGGACGGCCGGTCGGTGCCGTTAACGAGGCACTTGAAGAAGTCCGACACGTGGGAGCGGCGAATGGACCAGAATGCCCCTCCCGCTAACAACAATACGATGAACAAGTCGGAGACGTTCCACGAGCGGAGCAGGACGACTGCGACCGGGTCGCCGGTGAGACAGTCGCCCGGGTCGTCGGGGGCCCGGCTGAGGAAGGAACCGTCGCTGAGTCAGGACGAGTTGAACCGGCGGGTGGAGGCGTTCATCAACAAGTTTAACGAGGAGATGAGGCTGCAGAGGCAGGAGTCGTTGAACCAGTACCAGGAGATGGTCGGCCGTGGGGCCCAGGCGGCGCCGTTAGCTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

356

Amino Acids

39.08

Weight (kDa)

6.42

Isoelectric Point (pI)

57.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4408 PF14364 45 - 77 7.2e-16 Domain of unknown function (DUF4408)
DUF761 PF05553 312 - 346 1.5e-16 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 736, 1054
AccB7I CCANNNNNTGG 1 cut(s) 1030
AccBSI CCGCTC 2 cut(s) 778, 847
AccI GTMKAC 1 cut(s) 5
AccII CGCG 3 cut(s) 110, 332, 467
AclWI GGATC 1 cut(s) 316
AcoI YGGCCR 4 cut(s) 75, 105, 727, 1036
AcuI CTGAAG 2 cut(s) 107, 669
AcvI CACGTG 2 cut(s) 708, 771
AcyI GRCGYC 4 cut(s) 63, 366, 513, 1055
AdeI CACNNNGTG 1 cut(s) 554
AfaI GTAC 4 cut(s) 350, 383, 425, 1022
AfiI CCNNNNNNNGG 8 cut(s) 331, 540, 653, 771, 912, 955, 1024, 1030
AflIII ACRYGT 1 cut(s) 768
AgeI ACCGGT 1 cut(s) 610
AgsI TTSAA 4 cut(s) 463, 757, 946, 1015
AhdI GACNNNNNGTC 1 cut(s) 730
AjnI CCWGG 3 cut(s) 539, 1023, 1047
AluBI AGCT 5 cut(s) 91, 147, 229, 641, 1064
AluI AGCT 5 cut(s) 91, 147, 229, 641, 1064
Alw21I GWGCWC 2 cut(s) 149, 707
Alw26I GTCTC 4 cut(s) 73, 440, 827, 874
AlwI GGATC 1 cut(s) 316
Ama87I CYCGRG 1 cut(s) 890
AoxI GGCC 9 cut(s) 75, 105, 341, 542, 605, 727, 903, 1036, 1044
ApaI GGGCCC 2 cut(s) 907, 1048
ApeKI GCWGC 2 cut(s) 434, 994
AsiGI ACCGGT 1 cut(s) 610
Asp700I GAANNNNTTC 1 cut(s) 270
AspLEI GCGC 1 cut(s) 1057
AspS9I GGNCC 6 cut(s) 112, 787, 903, 904, 1044, 1045
AsuC2I CCSGG 4 cut(s) 868, 891, 892, 907
AsuHPI GGTGA 3 cut(s) 328, 518, 889
AvaI CYCGRG 1 cut(s) 890
AvaII GGWCC 2 cut(s) 112, 787
BaeGI GKGCMC 2 cut(s) 907, 1048
BanI GGYRCC 2 cut(s) 736, 1054
BanII GRGCYC 3 cut(s) 149, 907, 1048
BauI CACGAG 1 cut(s) 842
BbrPI CACGTG 2 cut(s) 708, 771
BbsI GAAGAC 1 cut(s) 719
Bbv12I GWGCWC 2 cut(s) 149, 707
BbvCI CCTCAGC 1 cut(s) 911
BbvI GCAGC 2 cut(s) 446, 981
BccI CCATC 2 cut(s) 283, 1024
BceAI ACGGC 7 cut(s) 62, 281, 379, 724, 742, 1023, 1042
BciT130I CCWGG 3 cut(s) 541, 1025, 1049
BcnI CCSGG 4 cut(s) 868, 891, 892, 907
BcoDI GTCTC 4 cut(s) 73, 440, 827, 874
BfaI CTAG 3 cut(s) 621, 642, 1069
BfmI CTRYAG 1 cut(s) 995
BfoI RGCGCY 1 cut(s) 1058
BglI GCCNNNNNGGC 2 cut(s) 685, 1052
Bme1390I CCNGG 7 cut(s) 541, 868, 891, 892, 907, 1025, 1049
Bme18I GGWCC 2 cut(s) 112, 787
BmeRI GACNNNNNGTC 1 cut(s) 730
BmeT110I CYCGRG 1 cut(s) 890
BmgT120I GGNCC 6 cut(s) 112, 787, 903, 904, 1044, 1045
BmiI GGNNCC 9 cut(s) 99, 471, 738, 904, 905, 921, 1045, 1046, 1056
BmrFI CCNGG 7 cut(s) 541, 868, 891, 892, 907, 1025, 1049
BmsI GCATC 4 cut(s) 207, 219, 421, 545
BpiI GAAGAC 1 cut(s) 719
BpmI CTGGAG 1 cut(s) 719
Bpu10I CCTNAGC 1 cut(s) 911
BpuEI CTTGAG 1 cut(s) 23
BpuMI CCSGG 4 cut(s) 868, 891, 892, 907
BsaAI YACGTR 2 cut(s) 708, 771
BsaHI GRCGYC 4 cut(s) 63, 366, 513, 1055
BsaI GGTCTC 1 cut(s) 440
BsaJI CCNNGG 7 cut(s) 72, 108, 330, 576, 890, 1039, 1047
BsaWI WCCGGW 3 cut(s) 100, 304, 610
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 8 cut(s) 331, 540, 653, 771, 912, 955, 1024, 1030
Bse118I RCCGGY 6 cut(s) 59, 280, 610, 729, 874, 948
Bse1I ACTGG 2 cut(s) 29, 1018
BseBI CCWGG 3 cut(s) 541, 1025, 1049
BseDI CCNNGG 7 cut(s) 72, 108, 330, 576, 890, 1039, 1047
BseGI GGATG 2 cut(s) 183, 536
BseLI CCNNNNNNNGG 8 cut(s) 331, 540, 653, 771, 912, 955, 1024, 1030
BseMII CTCAG 4 cut(s) 336, 365, 902, 920
BseNI ACTGG 2 cut(s) 29, 1018
BseRI GAGGAG 3 cut(s) 211, 499, 998
BseSI GKGCMC 2 cut(s) 907, 1048
BseX3I CGGCCG 2 cut(s) 727, 1036
BseXI GCAGC 2 cut(s) 446, 981
BsgI GTGCAG 1 cut(s) 531
Bsh1236I CGCG 3 cut(s) 110, 332, 467
Bsh1285I CGRYCG 4 cut(s) 730, 734, 867, 1039
BshFI GGCC 9 cut(s) 77, 107, 343, 544, 607, 729, 905, 1038, 1046
BshNI GGYRCC 2 cut(s) 736, 1054
BshTI ACCGGT 1 cut(s) 610
BsiEI CGRYCG 4 cut(s) 730, 734, 867, 1039
BsiHKAI GWGCWC 2 cut(s) 149, 707
BsiHKCI CYCGRG 1 cut(s) 890
BsiWI CGTACG 1 cut(s) 423
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 8 cut(s) 331, 540, 653, 771, 912, 955, 1024, 1030
BsmAI GTCTC 4 cut(s) 73, 440, 827, 874
BsmBI CGTCTC 2 cut(s) 73, 827
BsmFI GGGAC 1 cut(s) 284
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 9 cut(s) 77, 107, 343, 544, 607, 729, 905, 1038, 1046
Bso31I GGTCTC 1 cut(s) 440
BsoBI CYCGRG 1 cut(s) 890
Bsp120I GGGCCC 2 cut(s) 903, 1044
Bsp1286I GDGCHC 4 cut(s) 149, 707, 907, 1048
Bsp143I GATC 3 cut(s) 42, 51, 321
Bsp19I CCATGG 2 cut(s) 72, 576
BspANI GGCC 9 cut(s) 77, 107, 343, 544, 607, 729, 905, 1038, 1046
BspCNI CTCAG 4 cut(s) 337, 366, 903, 921
BspFNI CGCG 3 cut(s) 110, 332, 467
BspLI GGNNCC 9 cut(s) 99, 471, 738, 904, 905, 921, 1045, 1046, 1056
BspMAI CTGCAG 1 cut(s) 999
BspPI GGATC 1 cut(s) 316
BspT107I GGYRCC 2 cut(s) 736, 1054
BspTNI GGTCTC 1 cut(s) 440
BsrBI CCGCTC 2 cut(s) 778, 847
BsrFI RCCGGY 6 cut(s) 59, 280, 610, 729, 874, 948
BsrI ACTGG 2 cut(s) 29, 1018
BssAI RCCGGY 6 cut(s) 59, 280, 610, 729, 874, 948
BssECI CCNNGG 7 cut(s) 72, 108, 330, 576, 890, 1039, 1047
BssMI GATC 3 cut(s) 42, 51, 321
BssNI GRCGYC 4 cut(s) 63, 366, 513, 1055
BssSI CACGAG 1 cut(s) 842
BssT1I CCWWGG 2 cut(s) 72, 576
Bst2BI CACGAG 1 cut(s) 842
Bst2UI CCWGG 3 cut(s) 541, 1025, 1049
Bst4CI ACNGT 5 cut(s) 316, 386, 451, 885, 924
Bst6I CTCTTC 1 cut(s) 677
BstACI GRCGYC 4 cut(s) 63, 366, 513, 1055
BstBAI YACGTR 2 cut(s) 708, 771
BstC8I GCNNGC 2 cut(s) 282, 546
BstDEI CTNAG 4 cut(s) 345, 374, 911, 929
BstDSI CCRYGG 5 cut(s) 72, 108, 330, 576, 1039
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 2 cut(s) 183, 536
BstFNI CGCG 3 cut(s) 110, 332, 467
BstH2I RGCGCY 1 cut(s) 1058
BstHHI GCGC 1 cut(s) 1057
BstKTI GATC 3 cut(s) 45, 54, 324
BstMAI GTCTC 4 cut(s) 73, 440, 827, 874
BstMBI GATC 3 cut(s) 42, 51, 321
BstMCI CGRYCG 4 cut(s) 730, 734, 867, 1039
BstNI CCWGG 3 cut(s) 541, 1025, 1049
BstSCI CCNGG 7 cut(s) 539, 866, 889, 890, 905, 1023, 1047
BstSFI CTRYAG 1 cut(s) 995
BstSLI GKGCMC 2 cut(s) 907, 1048
BstUI CGCG 3 cut(s) 110, 332, 467
BstV1I GCAGC 2 cut(s) 446, 981
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 1 cut(s) 321
BstYI RGATCY 1 cut(s) 321
BstZI CGGCCG 2 cut(s) 727, 1036
BsuRI GGCC 9 cut(s) 77, 107, 343, 544, 607, 729, 905, 1038, 1046
BtgI CCRYGG 5 cut(s) 72, 108, 330, 576, 1039
BtsCI GGATG 2 cut(s) 183, 536
BtsIMutI CAGTG 1 cut(s) 83
Cac8I GCNNGC 2 cut(s) 282, 546
CfoI GCGC 1 cut(s) 1057
Cfr10I RCCGGY 6 cut(s) 59, 280, 610, 729, 874, 948
Cfr13I GGNCC 6 cut(s) 112, 787, 903, 904, 1044, 1045
Cfr42I CCGCGG 2 cut(s) 111, 333
Cfr9I CCCGGG 1 cut(s) 890
CseI GACGC 3 cut(s) 52, 355, 521
Csp6I GTAC 4 cut(s) 349, 382, 424, 1021
CspAI ACCGGT 1 cut(s) 610
CviAII CATG 2 cut(s) 73, 577
CviQI GTAC 4 cut(s) 349, 382, 424, 1021
DdeI CTNAG 4 cut(s) 345, 374, 911, 929
DinI GGCGCC 1 cut(s) 1056
DpnI GATC 3 cut(s) 44, 53, 323
DpnII GATC 3 cut(s) 42, 51, 321
DraIII CACNNNGTG 1 cut(s) 554
DriI GACNNNNNGTC 1 cut(s) 730
EaeI YGGCCR 4 cut(s) 75, 105, 727, 1036
EagI CGGCCG 2 cut(s) 727, 1036
Eam1104I CTCTTC 1 cut(s) 677
Eam1105I GACNNNNNGTC 1 cut(s) 730
EarI CTCTTC 1 cut(s) 677
EciI GGCGGA 2 cut(s) 264, 299
Ecl136II GAGCTC 1 cut(s) 147
EclXI CGGCCG 2 cut(s) 727, 1036
Eco130I CCWWGG 2 cut(s) 72, 576
Eco147I AGGCCT 2 cut(s) 343, 544
Eco24I GRGCYC 3 cut(s) 149, 907, 1048
Eco31I GGTCTC 1 cut(s) 440
Eco47I GGWCC 2 cut(s) 112, 787
Eco52I CGGCCG 2 cut(s) 727, 1036
Eco53kI GAGCTC 1 cut(s) 147
Eco57I CTGAAG 2 cut(s) 107, 669
Eco72I CACGTG 2 cut(s) 708, 771
Eco88I CYCGRG 1 cut(s) 890
EcoICRI GAGCTC 1 cut(s) 147
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoO109I RGGNCCY 2 cut(s) 903, 1044
EcoRII CCWGG 3 cut(s) 539, 1023, 1047
EcoT14I CCWWGG 2 cut(s) 72, 576
EcoT38I GRGCYC 3 cut(s) 149, 907, 1048
EgeI GGCGCC 1 cut(s) 1056
EheI GGCGCC 1 cut(s) 1056
ErhI CCWWGG 2 cut(s) 72, 576
Esp3I CGTCTC 2 cut(s) 73, 827
FaeI CATG 2 cut(s) 76, 580
FaiI YATR 4 cut(s) 74, 142, 234, 578
FaqI GGGAC 1 cut(s) 284
FatI CATG 2 cut(s) 72, 576
FauI CCCGC 3 cut(s) 334, 811, 945
FblI GTMKAC 1 cut(s) 5
FokI GGATG 2 cut(s) 170, 523
FriOI GRGCYC 3 cut(s) 149, 907, 1048
FspBI CTAG 3 cut(s) 621, 642, 1069
GlaI GCGC 1 cut(s) 1056
GsuI CTGGAG 1 cut(s) 719
HaeII RGCGCY 1 cut(s) 1058
HaeIII GGCC 9 cut(s) 77, 107, 343, 544, 607, 729, 905, 1038, 1046
HgaI GACGC 3 cut(s) 52, 355, 521
HhaI GCGC 1 cut(s) 1057
Hin1I GRCGYC 4 cut(s) 63, 366, 513, 1055
Hin1II CATG 2 cut(s) 76, 580
Hin6I GCGC 1 cut(s) 1055
HinP1I GCGC 1 cut(s) 1055
HincII GTYRAC 2 cut(s) 6, 744
HindII GTYRAC 2 cut(s) 6, 744
HinfI GANTC 7 cut(s) 260, 392, 419, 572, 624, 931, 1007
HpaI GTTAAC 1 cut(s) 744
HphI GGTGA 3 cut(s) 328, 518, 889
Hpy166II GTNNAC 3 cut(s) 6, 351, 744
Hpy188I TCNGA 6 cut(s) 247, 265, 375, 418, 766, 832
Hpy188III TCNNGA 4 cut(s) 40, 257, 647, 935
Hpy8I GTNNAC 3 cut(s) 6, 351, 744
HpyAV CCTTC 5 cut(s) 144, 472, 562, 644, 910
HpyCH4III ACNGT 5 cut(s) 316, 386, 451, 885, 924
HpyCH4IV ACGT 4 cut(s) 501, 707, 770, 836
HpyCH4V TGCA 5 cut(s) 198, 434, 548, 562, 997
HpyF3I CTNAG 4 cut(s) 345, 374, 911, 929
HpySE526I ACGT 4 cut(s) 501, 707, 770, 836
Hsp92I GRCGYC 4 cut(s) 63, 366, 513, 1055
Hsp92II CATG 2 cut(s) 76, 580
HspAI GCGC 1 cut(s) 1055
KasI GGCGCC 1 cut(s) 1054
KroI GCCGGC 1 cut(s) 280
KroNI GCCGGC 1 cut(s) 282
KspAI GTTAAC 1 cut(s) 744
KspI CCGCGG 2 cut(s) 111, 333
Kzo9I GATC 3 cut(s) 42, 51, 321
LmnI GCTCC 6 cut(s) 15, 144, 234, 469, 775, 849
Lsp1109I GCAGC 2 cut(s) 446, 981
LweI GCATC 4 cut(s) 207, 219, 421, 545
MaeI CTAG 3 cut(s) 621, 642, 1069
MaeII ACGT 4 cut(s) 501, 707, 770, 836
MaeIII GTNAC 2 cut(s) 27, 386
MalI GATC 3 cut(s) 44, 53, 323
MbiI CCGCTC 2 cut(s) 778, 847
MboI GATC 3 cut(s) 42, 51, 321
MboII GAAGA 5 cut(s) 260, 331, 694, 724, 769
MflI RGATCY 1 cut(s) 321
MhlI GDGCHC 4 cut(s) 149, 707, 907, 1048
Mly113I GGCGCC 1 cut(s) 1055
MlyI GAGTC 2 cut(s) 940, 1016
MmeI TCCRAC 2 cut(s) 789, 810
MreI CGCCGGCG 1 cut(s) 280
MroNI GCCGGC 1 cut(s) 280
MroXI GAANNNNTTC 1 cut(s) 270
MseI TTAA 3 cut(s) 498, 743, 978
MspA1I CMGCKG 3 cut(s) 110, 332, 437
MspR9I CCNGG 7 cut(s) 541, 868, 891, 892, 907, 1025, 1049
Mva1269I GAATGC 1 cut(s) 799
MvaI CCWGG 3 cut(s) 541, 1025, 1049
MvnI CGCG 3 cut(s) 110, 332, 467
NaeI GCCGGC 1 cut(s) 282
NarI GGCGCC 1 cut(s) 1055
NciI CCSGG 4 cut(s) 868, 891, 892, 907
NcoI CCATGG 2 cut(s) 72, 576
NdeII GATC 3 cut(s) 42, 51, 321
NgoMIV GCCGGC 1 cut(s) 280
NlaIII CATG 2 cut(s) 76, 580
NlaIV GGNNCC 9 cut(s) 99, 471, 738, 904, 905, 921, 1045, 1046, 1056
PceI AGGCCT 2 cut(s) 343, 544
PcsI WCGNNNNNNNCGW 3 cut(s) 375, 713, 893
PctI GAATGC 1 cut(s) 799
PdiI GCCGGC 1 cut(s) 282
PdmI GAANNNNTTC 1 cut(s) 270
PfeI GAWTC 5 cut(s) 260, 392, 419, 572, 624
Pfl23II CGTACG 1 cut(s) 423
PflFI GACNNNGTC 2 cut(s) 116, 868
PflMI CCANNNNNTGG 1 cut(s) 1030
PinAI ACCGGT 1 cut(s) 610
PleI GAGTC 2 cut(s) 939, 1015
PluTI GGCGCC 1 cut(s) 1058
PmaCI CACGTG 2 cut(s) 708, 771
PmlI CACGTG 2 cut(s) 708, 771
PpsI GAGTC 2 cut(s) 939, 1015
Ppu21I YACGTR 2 cut(s) 708, 771
Psp124BI GAGCTC 1 cut(s) 149
Psp6I CCWGG 3 cut(s) 539, 1023, 1047
PspCI CACGTG 2 cut(s) 708, 771
PspGI CCWGG 3 cut(s) 539, 1023, 1047
PspLI CGTACG 1 cut(s) 423
PspN4I GGNNCC 9 cut(s) 99, 471, 738, 904, 905, 921, 1045, 1046, 1056
PspOMI GGGCCC 2 cut(s) 903, 1044
PspPI GGNCC 6 cut(s) 112, 787, 903, 904, 1044, 1045
PstI CTGCAG 1 cut(s) 999
PsuI RGATCY 1 cut(s) 321
PsyI GACNNNGTC 2 cut(s) 116, 868
RsaI GTAC 4 cut(s) 350, 383, 425, 1022
RsaNI GTAC 4 cut(s) 349, 382, 424, 1021
SacI GAGCTC 1 cut(s) 149
SacII CCGCGG 2 cut(s) 111, 333
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 3 cut(s) 498, 743, 978
Sau3AI GATC 3 cut(s) 42, 51, 321
Sau96I GGNCC 6 cut(s) 112, 787, 903, 904, 1044, 1045
SchI GAGTC 2 cut(s) 940, 1016
ScrFI CCNGG 7 cut(s) 541, 868, 891, 892, 907, 1025, 1049
SduI GDGCHC 4 cut(s) 149, 707, 907, 1048
SfaNI GCATC 4 cut(s) 207, 219, 421, 545
SfcI CTRYAG 1 cut(s) 995
SfoI GGCGCC 1 cut(s) 1056
Sfr303I CCGCGG 2 cut(s) 111, 333
SgrAI CRCCGGYG 3 cut(s) 59, 280, 874
SgrBI CCGCGG 2 cut(s) 111, 333
SinI GGWCC 2 cut(s) 112, 787
SmaI CCCGGG 1 cut(s) 892
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
SseBI AGGCCT 2 cut(s) 343, 544
SspDI GGCGCC 1 cut(s) 1054
SspMI CTAG 3 cut(s) 621, 642, 1069
SstI GAGCTC 1 cut(s) 149
StuI AGGCCT 2 cut(s) 343, 544
StyD4I CCNGG 7 cut(s) 539, 866, 889, 890, 905, 1023, 1047
StyI CCWWGG 2 cut(s) 72, 576
TaaI ACNGT 5 cut(s) 316, 386, 451, 885, 924
TaiI ACGT 4 cut(s) 504, 710, 773, 839
TaqI TCGA 3 cut(s) 5, 311, 674
TatI WGTACW 1 cut(s) 348
TfiI GAWTC 5 cut(s) 260, 392, 419, 572, 624
Tru1I TTAA 3 cut(s) 498, 743, 978
Tru9I TTAA 3 cut(s) 498, 743, 978
TscAI CASTG 1 cut(s) 90
TseI GCWGC 2 cut(s) 434, 994
TspDTI ATGAA 2 cut(s) 836, 955
TspGWI ACGGA 3 cut(s) 441, 565, 737
TspMI CCCGGG 1 cut(s) 890
TspRI CASTG 1 cut(s) 90
Tth111I GACNNNGTC 2 cut(s) 116, 868
Van91I CCANNNNNTGG 1 cut(s) 1030
VpaK11BI GGWCC 2 cut(s) 112, 787
XagI CCTNNNNNAGG 1 cut(s) 651
XmaI CCCGGG 1 cut(s) 890
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 270
XspI CTAG 3 cut(s) 621, 642, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.