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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000002651 RLG00000011850 RLG00000019599 RLG00000023081 RLG00000029014 RLG00000029351 |
| rosa_multiflora | Rmu_sc0001942.1_g000046 |
| rosa_rugosa | Rorug05G0246800 |
| rosa_samantha | Rh2AG212200 Rh5CG359900 Rh5DG159600 Rh5DG404900 Rh6AG221600 Rh6DG218800 Rh6DG450200 Rh7AG199700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 165 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 176 |
| AciI | CCGC | 3 cut(s) | 5, 144, 180 |
| AclWI | GGATC | 1 cut(s) | 96 |
| AcoI | YGGCCR | 1 cut(s) | 181 |
| AcyI | GRCGYC | 1 cut(s) | 162 |
| AfaI | GTAC | 1 cut(s) | 9 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 176 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 198 |
| AluBI | AGCT | 1 cut(s) | 82 |
| AluI | AGCT | 1 cut(s) | 82 |
| Alw26I | GTCTC | 1 cut(s) | 120 |
| AlwI | GGATC | 1 cut(s) | 96 |
| AoxI | GGCC | 1 cut(s) | 181 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| AsuII | TTCGAA | 1 cut(s) | 55 |
| BbsI | GAAGAC | 1 cut(s) | 197 |
| BcoDI | GTCTC | 1 cut(s) | 120 |
| BisI | GCNGC | 2 cut(s) | 145, 181 |
| BlsI | GCNGC | 2 cut(s) | 146, 182 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 198 |
| BmrI | ACTGGG | 1 cut(s) | 164 |
| BmuI | ACTGGG | 1 cut(s) | 164 |
| BpiI | GAAGAC | 1 cut(s) | 197 |
| Bpu10I | CCTNAGC | 1 cut(s) | 78 |
| Bpu14I | TTCGAA | 1 cut(s) | 55 |
| BsaHI | GRCGYC | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 120 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 176 |
| Bse1I | ACTGG | 2 cut(s) | 130, 170 |
| BseGI | GGATG | 2 cut(s) | 27, 165 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BseNI | ACTGG | 2 cut(s) | 130, 170 |
| BseRI | GAGGAG | 1 cut(s) | 123 |
| BseX3I | CGGCCG | 1 cut(s) | 181 |
| Bsh1285I | CGRYCG | 1 cut(s) | 184 |
| BshFI | GGCC | 1 cut(s) | 183 |
| BsiEI | CGRYCG | 1 cut(s) | 184 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BsmAI | GTCTC | 1 cut(s) | 120 |
| BsnI | GGCC | 1 cut(s) | 183 |
| Bso31I | GGTCTC | 1 cut(s) | 120 |
| Bsp119I | TTCGAA | 1 cut(s) | 55 |
| Bsp143I | GATC | 2 cut(s) | 22, 88 |
| BspACI | CCGC | 3 cut(s) | 5, 144, 180 |
| BspANI | GGCC | 1 cut(s) | 183 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspPI | GGATC | 1 cut(s) | 96 |
| BspT104I | TTCGAA | 1 cut(s) | 55 |
| BspTNI | GGTCTC | 1 cut(s) | 120 |
| BsrI | ACTGG | 2 cut(s) | 130, 170 |
| BssMI | GATC | 2 cut(s) | 22, 88 |
| BssNI | GRCGYC | 1 cut(s) | 162 |
| Bst6I | CTCTTC | 1 cut(s) | 17 |
| BstACI | GRCGYC | 1 cut(s) | 162 |
| BstBI | TTCGAA | 1 cut(s) | 55 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstF5I | GGATG | 2 cut(s) | 27, 165 |
| BstKTI | GATC | 2 cut(s) | 25, 91 |
| BstMAI | GTCTC | 1 cut(s) | 120 |
| BstMBI | GATC | 2 cut(s) | 22, 88 |
| BstMCI | CGRYCG | 1 cut(s) | 184 |
| BstV2I | GAAGAC | 1 cut(s) | 197 |
| BstX2I | RGATCY | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 88 |
| BstZI | CGGCCG | 1 cut(s) | 181 |
| BsuRI | GGCC | 1 cut(s) | 183 |
| BtsCI | GGATG | 2 cut(s) | 27, 165 |
| BtsI | GCAGTG | 1 cut(s) | 101 |
| BtsIMutI | CAGTG | 2 cut(s) | 101, 137 |
| Csp6I | GTAC | 1 cut(s) | 8 |
| CviJI | RGCY | 2 cut(s) | 82, 183 |
| CviKI_1 | RGCY | 2 cut(s) | 82, 183 |
| CviQI | GTAC | 1 cut(s) | 8 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 2 cut(s) | 24, 90 |
| DpnII | GATC | 2 cut(s) | 22, 88 |
| DriI | GACNNNNNGTC | 1 cut(s) | 198 |
| EaeI | YGGCCR | 1 cut(s) | 181 |
| EagI | CGGCCG | 1 cut(s) | 181 |
| Eam1104I | CTCTTC | 1 cut(s) | 17 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 17 |
| EclXI | CGGCCG | 1 cut(s) | 181 |
| Eco31I | GGTCTC | 1 cut(s) | 120 |
| Eco52I | CGGCCG | 1 cut(s) | 181 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 26, 58 |
| Fnu4HI | GCNGC | 2 cut(s) | 145, 181 |
| FokI | GGATG | 2 cut(s) | 14, 152 |
| Fsp4HI | GCNGC | 2 cut(s) | 145, 181 |
| GluI | GCNGC | 2 cut(s) | 145, 181 |
| HaeIII | GGCC | 1 cut(s) | 183 |
| Hin1I | GRCGYC | 1 cut(s) | 162 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy188I | TCNGA | 1 cut(s) | 22 |
| Hpy188III | TCNNGA | 3 cut(s) | 77, 86, 116 |
| Hpy99I | CGWCG | 1 cut(s) | 164 |
| HpyAV | CCTTC | 1 cut(s) | 62 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Hsp92I | GRCGYC | 1 cut(s) | 162 |
| Kzo9I | GATC | 2 cut(s) | 22, 88 |
| LpnPI | CCDG | 4 cut(s) | 71, 90, 143, 183 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MalI | GATC | 2 cut(s) | 24, 90 |
| MboI | GATC | 2 cut(s) | 22, 88 |
| MboII | GAAGA | 3 cut(s) | 4, 7, 202 |
| MflI | RGATCY | 1 cut(s) | 88 |
| MluCI | AATT | 1 cut(s) | 137 |
| MnlI | CCTC | 4 cut(s) | 74, 101, 104, 142 |
| NdeII | GATC | 2 cut(s) | 22, 88 |
| NspV | TTCGAA | 1 cut(s) | 55 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 176 |
| PkrI | GCNGC | 2 cut(s) | 146, 182 |
| PsuI | RGATCY | 1 cut(s) | 88 |
| RsaI | GTAC | 1 cut(s) | 9 |
| RsaNI | GTAC | 1 cut(s) | 8 |
| SatI | GCNGC | 2 cut(s) | 145, 181 |
| Sau3AI | GATC | 2 cut(s) | 22, 88 |
| SetI | ASST | 5 cut(s) | 54, 66, 84, 115, 165 |
| SfuI | TTCGAA | 1 cut(s) | 55 |
| Sse9I | AATT | 1 cut(s) | 137 |
| SsiI | CCGC | 3 cut(s) | 5, 144, 180 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TaqI | TCGA | 2 cut(s) | 48, 55 |
| TasI | AATT | 1 cut(s) | 137 |
| TauI | GCSGC | 2 cut(s) | 147, 183 |
| TscAI | CASTG | 2 cut(s) | 108, 137 |
| TspRI | CASTG | 2 cut(s) | 108, 137 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 176 |
| ZraI | GACGTC | 1 cut(s) | 163 |