Rorug05G0551900

Thioredoxin domain-containing protein 9 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005041
Physical Location & Seq
Reverse (-)
74011325 .. 74014453
3129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0551900.1

Sequence Viewer

Length: 1944 bp
ATGTCGTTAGTTCCATATTCCGACCCGAATTCGGAGCCGGACTCATCCAACCCTGCATGGCAGGACATGTTCCGATCAGCTTCAAACCGGAAATCTACACCGGATCCTCACGCGCCTCACGCGCCGCCGTCGCCGGCTCCGGACCCGCCGAAACCGGCCGGCCCAGATCACAAAACCGGCGATCCCCAGGTACGGCTAGCCCTGTACATAACCATGGCGCATGCAGGTCTGGCCTTCACCATTTTTATATTCTATGCTGTGGGTAAGCTTTTAGAGGAGTACTTGAGGCCTATTCAGTGGGCTGTGTTGTGTTCAATTCCTTTGAGAGGTATACAGCAAGCCCTTGTGGGGTTTTGGTCTGAGCCATTGAGGCTTGGGCTGACTGAGACTGTTTTGGCTGTTCCTGTTGCGATTTTCCGGGTTTTTGTGGGTACCCTTGTGGAGGTTAGGGAGATTTGTTTGAGGGTGTTCCTCAGGAAGCCGAAATCGGAGCACCGGAGGAAGCACCAGAGTGAGTTTTCTAAGCTGTTGAGGTGGTTGGTGTCGTTTTGGATACTTATACTTGCTTATGAGAGGATTGGTGGTGTTGGGTCTTTGGGGATTGTTGGATTAGGCTTTGTTTTTAATGCTAAGGGTGTGGATTCGACAATGCGGACTGTGTCCTCTTTGAGGTGTAGTAGCTTTCGGCGCAGCCCCATTAGTGCTTATTTCACTAGGAGGGTGTTGATTAGGTTGAAGACCATTGTGGCAATTGGGTTGATTTTTGCTATGATTGTGGGGTTCTTGGTTGGTGTCACGTTTTTTTCGTATAAGATTGGAGTTGAGAGTAAGGACGCGGTGATTTCGTTGAAGTTGCATGTGGAAGAGAGTAATTATACTGAGAAGATGGGTATTAAGCAGTGGATGGATGAGAATGATGTTCCTGGAATGATGGATAGGTACAGTTCCAAGTTGTATGAGACAGTGTCTGAGCAGCTAGATAGTTTGGCAATGCAGTATAATATGACAGAATTTGCGACCGGGATTAAGCATTTTGCACTAAAACAGTCTGTTAATTCTTCCGAGCCTTCAAATGCTTTAGCTACCCCATCACCATACACAGAAAAGCTTGTGAGTTTGAGGAATCGGATCAGTAAAAGGGAATGGGGAAATATTTACACAGAGGTTCATGCAATTGTTAATGAATTAGTAATCACCAGGGAGGATTTGGTTGAGAAGGCAAAAGGGTTTGCCATGCGAGGAATGGATGTGTCACAGCGCGTGCTTGCCAGTAGTAGATCAGTTGTTGGAGGCAGTGCAAAAATTATGTTTTCCATTGGGAGTTCTATTGTGTCTGGAGCAGCTGAGGTCTTCAATTTTGTGTCTCAGTTGATGGTATTCTTCTGGGTATTGTATTATCTGATCACATCCGAGTCTGGGGGAGTGACTGAACAAGCAATGAGTATGGTTCCAATTTCAAAGTCTGCAAGGGTTAGATGTGTTGAAGTTCTTGATAATGCCATATCCGGTGTTCTTTTGGCGACAGCTGAGATTGCCATTTTTCAAGGATGTCTTACATGGCTTTTATTCAGACTATTTAAGATACACTTCTTGTACATGTCCACTGTTCTTGCCATCTTCAGCTCCGTGCTGCCAATATTCCCATCTTGGTTTGCAACTATTCCAGCAGCTCTTCAACTGCTGTTGGAAGGTAGATACATAGTAGCCATCATCTTGTCCAGTAGTCATCTTGTGCTTATGGATTATGGTTCATCTGAAATTCAGGAGGATATACCGGGTCATAGTGAATATCTCACAGGACTTAGCATCATTGGTGGAATGACATTGTTTCCATCTGCATTGGAGGGTGCAATTATGGGCCCGCTCATAACCACGGTTGTGATTGCTCTCAAGGATTTATACGTGGAATTTGTTCTGGATGAAACCAAGGATAAAGATGTGTAG

Protein Analysis

647

Amino Acids

71.76

Weight (kDa)

8.1

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AI-2E_transport PF01594 427 - 572 2.7e-11 AI-2E family transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 215
Acc65I GGTACC 1 cut(s) 431
AccB1I GGYRCC 1 cut(s) 431
AccBSI CCGCTC 1 cut(s) 1864
AccI GTMKAC 1 cut(s) 331
AccII CGCG 4 cut(s) 113, 122, 836, 1260
AccIII TCCGGA 1 cut(s) 139
AciI CCGC 5 cut(s) 125, 146, 652, 836, 1862
AclWI GGATC 4 cut(s) 98, 111, 176, 1136
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 4 cut(s) 28, 1010, 1758, 1907
AcuI CTGAAG 1 cut(s) 1603
AfaI GTAC 6 cut(s) 192, 206, 281, 433, 941, 1595
AfiI CCNNNNNNNGG 7 cut(s) 31, 192, 326, 348, 442, 669, 1416
AflIII ACRYGT 2 cut(s) 66, 1596
AjnI CCWGG 3 cut(s) 186, 922, 1196
AleI CACNNNNGTG 2 cut(s) 510, 1877
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 3 cut(s) 380, 953, 1368
AlwI GGATC 4 cut(s) 98, 111, 176, 1136
AlwNI CAGNNNCTG 1 cut(s) 968
Aor13HI TCCGGA 1 cut(s) 139
AoxI GGCC 5 cut(s) 156, 160, 231, 287, 1858
ApaI GGGCCC 1 cut(s) 1862
ApeKI GCWGC 5 cut(s) 690, 973, 1340, 1630, 1667
ApoI RAATTY 4 cut(s) 28, 1010, 1758, 1907
Asp700I GAANNNNTTC 1 cut(s) 1911
Asp718I GGTACC 1 cut(s) 431
AspLEI GCGC 5 cut(s) 115, 124, 220, 690, 1260
AspS9I GGNCC 4 cut(s) 142, 161, 1858, 1859
AsuC2I CCSGG 3 cut(s) 419, 1021, 1776
AsuHPI GGTGA 4 cut(s) 229, 850, 1083, 1186
AsuNHI GCTAGC 1 cut(s) 196
AvaII GGWCC 1 cut(s) 142
AxyI CCTNAGG 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 1862
BaeI ACNNNNGTAYC 2 cut(s) 423, 456
BamHI GGATCC 1 cut(s) 103
BanI GGYRCC 1 cut(s) 431
BanII GRGCYC 1 cut(s) 1862
BbsI GAAGAC 2 cut(s) 743, 1342
Bbv12I GWGCWC 1 cut(s) 495
BbvCI CCTCAGC 1 cut(s) 1344
BbvI GCAGC 5 cut(s) 702, 985, 1352, 1617, 1679
BccI CCATC 9 cut(s) 880, 898, 925, 1096, 1366, 1622, 1651, 1715, 1840
BceAI ACGGC 2 cut(s) 112, 209
BciT130I CCWGG 3 cut(s) 188, 924, 1198
BciVI GTATCC 1 cut(s) 546
BclI TGATCA 1 cut(s) 1401
BcnI CCSGG 3 cut(s) 419, 1021, 1776
BcoDI GTCTC 3 cut(s) 380, 953, 1368
BfaI CTAG 3 cut(s) 197, 714, 977
BfuAI ACCTGC 1 cut(s) 215
BfuI GTATCC 1 cut(s) 546
BglI GCCNNNNNGGC 1 cut(s) 370
BisI GCNGC 6 cut(s) 125, 691, 974, 1341, 1631, 1668
BlsI GCNGC 6 cut(s) 126, 692, 975, 1342, 1632, 1669
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 6 cut(s) 188, 419, 924, 1021, 1198, 1776
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 4 cut(s) 142, 161, 1858, 1859
BmiI GGNNCC 7 cut(s) 36, 105, 138, 144, 433, 1449, 1860
BmrFI CCNGG 6 cut(s) 188, 419, 924, 1021, 1198, 1776
BmsI GCATC 1 cut(s) 1815
BmtI GCTAGC 1 cut(s) 200
BpiI GAAGAC 2 cut(s) 743, 1342
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BpmI CTGGAG 1 cut(s) 1356
Bpu10I CCTNAGC 2 cut(s) 630, 1344
BpuEI CTTGAG 2 cut(s) 304, 1874
BpuMI CCSGG 3 cut(s) 419, 1021, 1776
BsaAI YACGTR 1 cut(s) 1903
BsaJI CCNNGG 5 cut(s) 186, 213, 1197, 1872, 1926
BsaWI WCCGGW 5 cut(s) 87, 100, 139, 495, 1505
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 192, 326, 348, 442, 669, 1416
Bse118I RCCGGY 4 cut(s) 133, 154, 158, 176
Bse1I ACTGG 2 cut(s) 1269, 1719
Bse21I CCTNAGG 1 cut(s) 473
Bse3DI GCAATG 2 cut(s) 996, 1443
BseAI TCCGGA 1 cut(s) 139
BseBI CCWGG 3 cut(s) 188, 924, 1198
BseDI CCNNGG 5 cut(s) 186, 213, 1197, 1872, 1926
BseGI GGATG 7 cut(s) 44, 909, 913, 1252, 1406, 1553, 1924
BseLI CCNNNNNNNGG 7 cut(s) 31, 192, 326, 348, 442, 669, 1416
BseMI GCAATG 2 cut(s) 996, 1443
BseMII CTCAG 8 cut(s) 351, 375, 487, 870, 960, 1335, 1379, 1518
BseNI ACTGG 2 cut(s) 1269, 1719
BseRI GAGGAG 1 cut(s) 290
BseSI GKGCMC 1 cut(s) 1862
BseX3I CGGCCG 1 cut(s) 156
BseXI GCAGC 5 cut(s) 702, 985, 1352, 1617, 1679
Bsh1236I CGCG 4 cut(s) 113, 122, 836, 1260
Bsh1285I CGRYCG 2 cut(s) 159, 1020
BshFI GGCC 5 cut(s) 158, 162, 233, 289, 1860
BshNI GGYRCC 1 cut(s) 431
BsiEI CGRYCG 2 cut(s) 159, 1020
BsiHKAI GWGCWC 1 cut(s) 495
BslI CCNNNNNNNGG 7 cut(s) 31, 192, 326, 348, 442, 669, 1416
BsmAI GTCTC 3 cut(s) 380, 953, 1368
BsnI GGCC 5 cut(s) 158, 162, 233, 289, 1860
Bsp120I GGGCCC 1 cut(s) 1858
Bsp1286I GDGCHC 2 cut(s) 495, 1862
Bsp13I TCCGGA 1 cut(s) 139
Bsp1407I TGTACA 2 cut(s) 204, 1593
Bsp143I GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 5 cut(s) 125, 146, 652, 836, 1862
BspANI GGCC 5 cut(s) 158, 162, 233, 289, 1860
BspCNI CTCAG 8 cut(s) 352, 376, 486, 871, 961, 1336, 1378, 1519
BspEI TCCGGA 1 cut(s) 139
BspFNI CGCG 4 cut(s) 113, 122, 836, 1260
BspLI GGNNCC 7 cut(s) 36, 105, 138, 144, 433, 1449, 1860
BspMI ACCTGC 1 cut(s) 215
BspOI GCTAGC 1 cut(s) 200
BspPI GGATC 4 cut(s) 98, 111, 176, 1136
BspQI GCTCTTC 1 cut(s) 1677
BspT107I GGYRCC 1 cut(s) 431
BsrBI CCGCTC 1 cut(s) 1864
BsrDI GCAATG 2 cut(s) 996, 1443
BsrFI RCCGGY 4 cut(s) 133, 154, 158, 176
BsrGI TGTACA 2 cut(s) 204, 1593
BsrI ACTGG 2 cut(s) 1269, 1719
BssAI RCCGGY 4 cut(s) 133, 154, 158, 176
BssECI CCNNGG 5 cut(s) 186, 213, 1197, 1872, 1926
BssMI GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
BssNAI GTATAC 1 cut(s) 332
BssT1I CCWWGG 2 cut(s) 213, 1926
Bst1107I GTATAC 1 cut(s) 332
Bst2UI CCWGG 3 cut(s) 188, 924, 1198
Bst4CI ACNGT 7 cut(s) 391, 658, 944, 964, 1047, 1606, 1876
Bst6I CTCTTC 2 cut(s) 858, 1677
BstAUI TGTACA 2 cut(s) 204, 1593
BstBAI YACGTR 1 cut(s) 1903
BstC8I GCNNGC 8 cut(s) 135, 160, 198, 222, 339, 1262, 1266, 1862
BstDSI CCRYGG 2 cut(s) 213, 1872
BstENI CCTNNNNNAGG 3 cut(s) 324, 440, 667
BstF5I GGATG 7 cut(s) 44, 909, 913, 1252, 1406, 1553, 1924
BstFNI CGCG 4 cut(s) 113, 122, 836, 1260
BstHHI GCGC 5 cut(s) 115, 124, 220, 690, 1260
BstKTI GATC 7 cut(s) 77, 106, 169, 184, 1131, 1280, 1404
BstMAI GTCTC 3 cut(s) 380, 953, 1368
BstMBI GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
BstMCI CGRYCG 2 cut(s) 159, 1020
BstMWI GCNNNNNNNGC 7 cut(s) 119, 121, 130, 230, 370, 687, 1532
BstNI CCWGG 3 cut(s) 188, 924, 1198
BstNSI RCATGY 4 cut(s) 70, 224, 860, 1600
BstSCI CCNGG 6 cut(s) 186, 417, 922, 1019, 1196, 1774
BstSLI GKGCMC 1 cut(s) 1862
BstUI CGCG 4 cut(s) 113, 122, 836, 1260
BstV1I GCAGC 5 cut(s) 702, 985, 1352, 1617, 1679
BstV2I GAAGAC 2 cut(s) 743, 1342
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
BstZ17I GTATAC 1 cut(s) 332
BstZI CGGCCG 1 cut(s) 156
Bsu36I CCTNAGG 1 cut(s) 473
BsuI GTATCC 1 cut(s) 546
BsuRI GGCC 5 cut(s) 158, 162, 233, 289, 1860
BtgI CCRYGG 2 cut(s) 213, 1872
BtsCI GGATG 7 cut(s) 44, 909, 913, 1252, 1406, 1553, 1924
BtsI GCAGTG 2 cut(s) 905, 1300
BtsIMutI CAGTG 5 cut(s) 302, 905, 969, 1300, 1602
BveI ACCTGC 1 cut(s) 215
Cac8I GCNNGC 8 cut(s) 135, 160, 198, 222, 339, 1262, 1266, 1862
CaiI CAGNNNCTG 1 cut(s) 968
CfoI GCGC 5 cut(s) 115, 124, 220, 690, 1260
Cfr10I RCCGGY 4 cut(s) 133, 154, 158, 176
Cfr13I GGNCC 4 cut(s) 142, 161, 1858, 1859
CseI GACGC 1 cut(s) 842
Csp6I GTAC 6 cut(s) 191, 205, 280, 432, 940, 1594
CspCI CAANNNNNGTGG 2 cut(s) 1591, 1626
CviAII CATG 9 cut(s) 57, 67, 214, 221, 857, 1169, 1234, 1557, 1597
CviQI GTAC 6 cut(s) 191, 205, 280, 432, 940, 1594
DpnI GATC 7 cut(s) 76, 105, 168, 183, 1130, 1279, 1403
DpnII GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
EaeI YGGCCR 1 cut(s) 156
EagI CGGCCG 1 cut(s) 156
Eam1104I CTCTTC 2 cut(s) 858, 1677
EarI CTCTTC 2 cut(s) 858, 1677
EclXI CGGCCG 1 cut(s) 156
Eco130I CCWWGG 2 cut(s) 213, 1926
Eco147I AGGCCT 1 cut(s) 289
Eco24I GRGCYC 1 cut(s) 1862
Eco47I GGWCC 1 cut(s) 142
Eco52I CGGCCG 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 1603
Eco81I CCTNAGG 1 cut(s) 473
EcoNI CCTNNNNNAGG 3 cut(s) 324, 440, 667
EcoRI GAATTC 1 cut(s) 28
EcoRII CCWGG 3 cut(s) 186, 922, 1196
EcoT14I CCWWGG 2 cut(s) 213, 1926
EcoT38I GRGCYC 1 cut(s) 1862
ErhI CCWWGG 2 cut(s) 213, 1926
FaeI CATG 9 cut(s) 60, 70, 217, 224, 860, 1172, 1237, 1560, 1600
FalI AAGNNNNNCTT 4 cut(s) 1536, 1568, 1571, 1603
FatI CATG 9 cut(s) 56, 66, 213, 220, 856, 1168, 1233, 1556, 1596
FauI CCCGC 2 cut(s) 153, 1869
FbaI TGATCA 1 cut(s) 1401
FblI GTMKAC 1 cut(s) 331
Fnu4HI GCNGC 6 cut(s) 125, 691, 974, 1341, 1631, 1668
FokI GGATG 7 cut(s) 31, 916, 920, 1259, 1393, 1560, 1931
FriOI GRGCYC 1 cut(s) 1862
FseI GGCCGGCC 1 cut(s) 162
Fsp4HI GCNGC 6 cut(s) 125, 691, 974, 1341, 1631, 1668
FspBI CTAG 3 cut(s) 197, 714, 977
GlaI GCGC 5 cut(s) 114, 123, 219, 689, 1259
GluI GCNGC 6 cut(s) 125, 691, 974, 1341, 1631, 1668
GsuI CTGGAG 1 cut(s) 1356
HaeIII GGCC 5 cut(s) 158, 162, 233, 289, 1860
HgaI GACGC 1 cut(s) 842
HhaI GCGC 5 cut(s) 115, 124, 220, 690, 1260
Hin1II CATG 9 cut(s) 60, 70, 217, 224, 860, 1172, 1237, 1560, 1600
Hin6I GCGC 5 cut(s) 113, 122, 218, 688, 1258
HinP1I GCGC 5 cut(s) 113, 122, 218, 688, 1258
HindIII AAGCTT 2 cut(s) 266, 1106
HinfI GANTC 4 cut(s) 41, 641, 1123, 1412
HphI GGTGA 4 cut(s) 229, 850, 1083, 1186
Hpy166II GTNNAC 2 cut(s) 332, 1602
Hpy188III TCNNGA 6 cut(s) 140, 475, 1335, 1490, 1763, 1916
Hpy8I GTNNAC 2 cut(s) 332, 1602
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 4 cut(s) 244, 1077, 1210, 1682
HpyCH4III ACNGT 7 cut(s) 391, 658, 944, 964, 1047, 1606, 1876
HpyCH4IV ACGT 2 cut(s) 797, 1902
HpyF10VI GCNNNNNNNGC 7 cut(s) 119, 121, 130, 230, 370, 687, 1532
HpySE526I ACGT 2 cut(s) 797, 1902
Hsp92II CATG 9 cut(s) 60, 70, 217, 224, 860, 1172, 1237, 1560, 1600
HspAI GCGC 5 cut(s) 113, 122, 218, 688, 1258
Kpn2I TCCGGA 1 cut(s) 139
KpnI GGTACC 1 cut(s) 435
KroI GCCGGC 2 cut(s) 133, 158
KroNI GCCGGC 2 cut(s) 135, 160
Ksp22I TGATCA 1 cut(s) 1401
Kzo9I GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
LguI GCTCTTC 1 cut(s) 1677
LmnI GCTCC 5 cut(s) 34, 142, 490, 1337, 1628
Lsp1109I GCAGC 5 cut(s) 702, 985, 1352, 1617, 1679
LweI GCATC 1 cut(s) 1815
MaeI CTAG 3 cut(s) 197, 714, 977
MaeII ACGT 2 cut(s) 797, 1902
MaeIII GTNAC 3 cut(s) 793, 1251, 1423
MalI GATC 7 cut(s) 76, 105, 168, 183, 1130, 1279, 1403
MbiI CCGCTC 1 cut(s) 1864
MboI GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
MboII GAAGA 8 cut(s) 748, 875, 895, 1050, 1342, 1372, 1609, 1664
MfeI CAATTG 2 cut(s) 750, 1173
MflI RGATCY 1 cut(s) 103
MhlI GDGCHC 2 cut(s) 495, 1862
MlyI GAGTC 2 cut(s) 35, 1421
MmeI TCCRAC 5 cut(s) 45, 72, 586, 1267, 1665
MroI TCCGGA 1 cut(s) 139
MroNI GCCGGC 2 cut(s) 133, 158
MroXI GAANNNNTTC 1 cut(s) 1911
MseI TTAA 6 cut(s) 624, 894, 1026, 1053, 1179, 1578
MslI CAYNNNNRTG 3 cut(s) 212, 510, 1877
MspA1I CMGCKG 2 cut(s) 1343, 1526
MspR9I CCNGG 6 cut(s) 188, 419, 924, 1021, 1198, 1776
MunI CAATTG 2 cut(s) 750, 1173
MvaI CCWGG 3 cut(s) 188, 924, 1198
MvnI CGCG 4 cut(s) 113, 122, 836, 1260
MwoI GCNNNNNNNGC 7 cut(s) 119, 121, 130, 230, 370, 687, 1532
NaeI GCCGGC 2 cut(s) 135, 160
NciI CCSGG 3 cut(s) 419, 1021, 1776
NcoI CCATGG 1 cut(s) 213
NdeII GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
NgoMIV GCCGGC 2 cut(s) 133, 158
NheI GCTAGC 1 cut(s) 196
NlaIII CATG 9 cut(s) 60, 70, 217, 224, 860, 1172, 1237, 1560, 1600
NlaIV GGNNCC 7 cut(s) 36, 105, 138, 144, 433, 1449, 1860
NmuCI GTSAC 3 cut(s) 793, 1251, 1423
NspI RCATGY 4 cut(s) 70, 224, 860, 1600
OliI CACNNNNGTG 2 cut(s) 510, 1877
PaeI GCATGC 1 cut(s) 224
PceI AGGCCT 1 cut(s) 289
PciI ACATGT 2 cut(s) 66, 1596
PciSI GCTCTTC 1 cut(s) 1677
PcsI WCGNNNNNNNCGW 1 cut(s) 803
PdiI GCCGGC 2 cut(s) 135, 160
PdmI GAANNNNTTC 1 cut(s) 1911
PfeI GAWTC 2 cut(s) 641, 1123
PflFI GACNNNGTC 2 cut(s) 658, 964
PfoI TCCNGGA 1 cut(s) 922
PkrI GCNGC 6 cut(s) 126, 692, 975, 1342, 1632, 1669
PleI GAGTC 2 cut(s) 35, 1420
PpsI GAGTC 2 cut(s) 35, 1420
Ppu21I YACGTR 1 cut(s) 1903
PscI ACATGT 2 cut(s) 66, 1596
Psp6I CCWGG 3 cut(s) 186, 922, 1196
PspGI CCWGG 3 cut(s) 186, 922, 1196
PspN4I GGNNCC 7 cut(s) 36, 105, 138, 144, 433, 1449, 1860
PspOMI GGGCCC 1 cut(s) 1858
PspPI GGNCC 4 cut(s) 142, 161, 1858, 1859
PstNI CAGNNNCTG 1 cut(s) 968
PsuI RGATCY 1 cut(s) 103
PsyI GACNNNGTC 2 cut(s) 658, 964
PvuII CAGCTG 2 cut(s) 1343, 1526
RigI GGCCGGCC 1 cut(s) 162
RsaI GTAC 6 cut(s) 192, 206, 281, 433, 941, 1595
RsaNI GTAC 6 cut(s) 191, 205, 280, 432, 940, 1594
RseI CAYNNNNRTG 3 cut(s) 212, 510, 1877
SapI GCTCTTC 1 cut(s) 1677
SaqAI TTAA 6 cut(s) 624, 894, 1026, 1053, 1179, 1578
SatI GCNGC 6 cut(s) 125, 691, 974, 1341, 1631, 1668
Sau3AI GATC 7 cut(s) 74, 103, 166, 181, 1128, 1277, 1401
Sau96I GGNCC 4 cut(s) 142, 161, 1858, 1859
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 2 cut(s) 35, 1421
ScrFI CCNGG 6 cut(s) 188, 419, 924, 1021, 1198, 1776
SduI GDGCHC 2 cut(s) 495, 1862
SfaNI GCATC 1 cut(s) 1815
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 3 cut(s) 212, 510, 1877
SmlI CTYRAG 2 cut(s) 283, 1889
SmoI CTYRAG 2 cut(s) 283, 1889
SphI GCATGC 1 cut(s) 224
SseBI AGGCCT 1 cut(s) 289
SsiI CCGC 5 cut(s) 125, 146, 652, 836, 1862
SspI AATATT 2 cut(s) 1153, 1638
SspMI CTAG 3 cut(s) 197, 714, 977
StuI AGGCCT 1 cut(s) 289
StyD4I CCNGG 6 cut(s) 186, 417, 922, 1019, 1196, 1774
StyI CCWWGG 2 cut(s) 213, 1926
TaaI ACNGT 7 cut(s) 391, 658, 944, 964, 1047, 1606, 1876
TaiI ACGT 2 cut(s) 800, 1905
TaqI TCGA 1 cut(s) 644
TatI WGTACW 3 cut(s) 204, 279, 1593
TauI GCSGC 1 cut(s) 127
TfiI GAWTC 2 cut(s) 641, 1123
Tru1I TTAA 6 cut(s) 624, 894, 1026, 1053, 1179, 1578
Tru9I TTAA 6 cut(s) 624, 894, 1026, 1053, 1179, 1578
TscAI CASTG 5 cut(s) 302, 905, 969, 1300, 1609
TseFI GTSAC 3 cut(s) 793, 1251, 1423
TseI GCWGC 5 cut(s) 690, 973, 1340, 1630, 1667
Tsp45I GTSAC 3 cut(s) 793, 1251, 1423
TspDTI ATGAA 4 cut(s) 1157, 1197, 1740, 1935
TspGWI ACGGA 1 cut(s) 1615
TspRI CASTG 5 cut(s) 302, 905, 969, 1300, 1609
Tth111I GACNNNGTC 2 cut(s) 658, 964
VpaK11BI GGWCC 1 cut(s) 142
XagI CCTNNNNNAGG 3 cut(s) 324, 440, 667
XapI RAATTY 4 cut(s) 28, 1010, 1758, 1907
XceI RCATGY 4 cut(s) 70, 224, 860, 1600
XcmI CCANNNNNNNNNTGG 2 cut(s) 1204, 1240
XmiI GTMKAC 1 cut(s) 331
XmnI GAANNNNTTC 1 cut(s) 1911
XspI CTAG 3 cut(s) 197, 714, 977
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.