Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24060 AT5G15030 AT5G15040 AT5G15040 AT5G15040 |
| rosa_chinensis | RchiOBHm_Chr6g0269611 |
| rosa_laevigata | RLG00000013843 RLG00000018235 |
| rosa_multiflora | Rmu_sc0003863.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00198570 |
| rosa_rugosa | Rorug06G0049100 Rorug06G0049200 Rorug06G0049200 Rorug06G0049300 Rorug06G0049400.1 |
| rosa_samantha | Rh6AG169200 Rh6AG169300 Rh6BG174500 Rh6CG168800 Rh6DG160700 |
| rosa_wichuraiana | Rw6G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 144 |
| AccI | GTMKAC | 1 cut(s) | 246 |
| AciI | CCGC | 1 cut(s) | 49 |
| AcsI | RAATTY | 4 cut(s) | 70, 287, 320, 385 |
| AfaI | GTAC | 1 cut(s) | 397 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 29, 331 |
| AgsI | TTSAA | 1 cut(s) | 286 |
| AluBI | AGCT | 3 cut(s) | 67, 82, 94 |
| AluI | AGCT | 3 cut(s) | 67, 82, 94 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 4 cut(s) | 70, 287, 320, 385 |
| AseI | ATTAAT | 1 cut(s) | 225 |
| AspS9I | GGNCC | 2 cut(s) | 146, 193 |
| AvaII | GGWCC | 2 cut(s) | 146, 193 |
| BauI | CACGAG | 1 cut(s) | 342 |
| BbsI | GAAGAC | 1 cut(s) | 142 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BccI | CCATC | 1 cut(s) | 119 |
| BfaI | CTAG | 1 cut(s) | 408 |
| BisI | GCNGC | 2 cut(s) | 50, 83 |
| BlsI | GCNGC | 2 cut(s) | 51, 84 |
| Bme18I | GGWCC | 2 cut(s) | 146, 193 |
| BmgT120I | GGNCC | 2 cut(s) | 146, 193 |
| BmiI | GGNNCC | 1 cut(s) | 194 |
| BpiI | GAAGAC | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 357 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 29, 331 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 29, 331 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BseYI | CCCAGC | 1 cut(s) | 90 |
| BslFI | GGGAC | 1 cut(s) | 206 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 29, 331 |
| BsmFI | GGGAC | 1 cut(s) | 206 |
| BspACI | CCGC | 1 cut(s) | 49 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 194 |
| BssSI | CACGAG | 1 cut(s) | 342 |
| Bst2BI | CACGAG | 1 cut(s) | 342 |
| Bst4CI | ACNGT | 1 cut(s) | 331 |
| Bst6I | CTCTTC | 1 cut(s) | 408 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 91 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BstV2I | GAAGAC | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 2 cut(s) | 146, 193 |
| Csp6I | GTAC | 1 cut(s) | 396 |
| CviJI | RGCY | 4 cut(s) | 67, 82, 94, 355 |
| CviKI_1 | RGCY | 4 cut(s) | 67, 82, 94, 355 |
| CviQI | GTAC | 1 cut(s) | 396 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 144 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 408 |
| EarI | CTCTTC | 1 cut(s) | 408 |
| Eco47I | GGWCC | 2 cut(s) | 146, 193 |
| EcoO109I | RGGNCCY | 1 cut(s) | 193 |
| EcoRI | GAATTC | 1 cut(s) | 70 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 10, 42, 296, 328 |
| FaqI | GGGAC | 1 cut(s) | 206 |
| FauNDI | CATATG | 1 cut(s) | 151 |
| FblI | GTMKAC | 1 cut(s) | 246 |
| Fnu4HI | GCNGC | 2 cut(s) | 50, 83 |
| Fsp4HI | GCNGC | 2 cut(s) | 50, 83 |
| FspBI | CTAG | 1 cut(s) | 408 |
| GluI | GCNGC | 2 cut(s) | 50, 83 |
| GsaI | CCCAGC | 1 cut(s) | 94 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| Hpy166II | GTNNAC | 1 cut(s) | 247 |
| Hpy188I | TCNGA | 2 cut(s) | 76, 207 |
| Hpy188III | TCNNGA | 2 cut(s) | 166, 374 |
| Hpy8I | GTNNAC | 1 cut(s) | 247 |
| HpyCH4III | ACNGT | 1 cut(s) | 331 |
| HpyCH4V | TGCA | 2 cut(s) | 155, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 91 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| LpnPI | CCDG | 3 cut(s) | 104, 129, 369 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| MaeI | CTAG | 1 cut(s) | 408 |
| MboII | GAAGA | 2 cut(s) | 147, 389 |
| MluCI | AATT | 5 cut(s) | 70, 158, 287, 320, 385 |
| MnlI | CCTC | 1 cut(s) | 213 |
| MseI | TTAA | 5 cut(s) | 96, 177, 182, 225, 366 |
| MspA1I | CMGCKG | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 91 |
| NdeI | CATATG | 1 cut(s) | 151 |
| NlaIV | GGNNCC | 1 cut(s) | 194 |
| PkrI | GCNGC | 2 cut(s) | 51, 84 |
| PpuMI | RGGWCCY | 1 cut(s) | 193 |
| PshBI | ATTAAT | 1 cut(s) | 225 |
| Psp5II | RGGWCCY | 1 cut(s) | 193 |
| PspFI | CCCAGC | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 194 |
| PspPI | GGNCC | 2 cut(s) | 146, 193 |
| PspPPI | RGGWCCY | 1 cut(s) | 193 |
| PvuII | CAGCTG | 1 cut(s) | 67 |
| RsaI | GTAC | 1 cut(s) | 397 |
| RsaNI | GTAC | 1 cut(s) | 396 |
| SalI | GTCGAC | 1 cut(s) | 245 |
| SaqAI | TTAA | 5 cut(s) | 96, 177, 182, 225, 366 |
| SatI | GCNGC | 2 cut(s) | 50, 83 |
| Sau96I | GGNCC | 2 cut(s) | 146, 193 |
| SetI | ASST | 7 cut(s) | 25, 69, 84, 96, 148, 198, 205 |
| SinI | GGWCC | 2 cut(s) | 146, 193 |
| SmlI | CTYRAG | 1 cut(s) | 372 |
| SmoI | CTYRAG | 1 cut(s) | 372 |
| Sse9I | AATT | 5 cut(s) | 70, 158, 287, 320, 385 |
| SsiI | CCGC | 1 cut(s) | 49 |
| SspMI | CTAG | 1 cut(s) | 408 |
| TaaI | ACNGT | 1 cut(s) | 331 |
| TaqI | TCGA | 2 cut(s) | 219, 246 |
| TasI | AATT | 5 cut(s) | 70, 158, 287, 320, 385 |
| TatI | WGTACW | 1 cut(s) | 395 |
| TauI | GCSGC | 1 cut(s) | 52 |
| Tru1I | TTAA | 5 cut(s) | 96, 177, 182, 225, 366 |
| Tru9I | TTAA | 5 cut(s) | 96, 177, 182, 225, 366 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspGWI | ACGGA | 1 cut(s) | 281 |
| VpaK11BI | GGWCC | 2 cut(s) | 146, 193 |
| VspI | ATTAAT | 1 cut(s) | 225 |
| XapI | RAATTY | 4 cut(s) | 70, 287, 320, 385 |
| XmiI | GTMKAC | 1 cut(s) | 246 |
| XspI | CTAG | 1 cut(s) | 408 |