Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0009770

Physical Location & Seq

Genomic Coordinates Forward (+)

22941152 .. 22952606

Gene Structure 11455 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG168800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAAGAGAATGAAGAGAATAACAGACGAAGCGTTCACTTCTTTTCAATCATTGCCGCTTGCTTCTTCGCGCGGTGACTCCGTTGGAGTAGGTGCCTCACAGAAATTGCCGACAAATGATCCTCTTACATACATCAAAGAAGTGGAGGACACCTTTCAAGACCAAAGAGAAAAGTATAATATGTTTCTTGAGGTCTTGAAGGATTTCCCCTTCAAGCCTCAAAGAAATGACATGCTAGGTGTCATTGCAAGAGTAAGGGAATTGTTTAAAGGGCATACCAAGTTACTTTTGGGGTTTAATACCTTCTTGCCAAAGGGTTTTGAGATAACTCTTGAGGAAGTGGAACCAATAAAGACAGCTTCACAGAAATTGTCGATGAATGATGCTCGTACATACATCAAAGAAGTGGAGGACACGTTTCAAGACCAAAGAGAAAAGTATAATATGTTTCTTGAGGTCATGAAGGATTTCCTTTTGAAGCCTGAAAGAAATGACATGGTAGGTGTCATTGCAAGAGTAATGGAATTGTTTAAAGGGCATACCAAGTTACTTTTGGGGTTTAATACCTTCTTGCCAAAGGGTTTTGAGATAATTGTTCGGAAAGTGGAACCAATACGGACAGTTAAGCCCGGACAAGCTATCAGTTTTTTAAACAAGATGAAGAAACGTTTCCAAAATGATGAGCAGGTATACAAGTCATTCATCAACATAGTGAATATGTATGTAAAGGAGCACAAGGACGTAAATGAGGTTTACCAGGAGGTTGCTTCTCTATTTGATGACCAACCAGATTTGCTGGATGAGTTCACTGGATTTTTACCACCAGATATGTCAGCAACAACTTCAACTAATCAGGGGCAATATGGTTGCAGTGCATATCCCTGTTTTAATAAGCAGAGCTCTGCTATACCCACTTTGCAACCAATGCCTATTGGCACGCAACATAGGCTGGATAAGATTACTTCTCATGGTGATCATGATATTAGTGTTGATCGTCCTGAGCTAGATGATGACAACGGAATGATGAACGTACTGAAGGAGCAGAGAAAGCGTTTTTCTGAGATGGAGAATAGGGATAGGAGAAATCATGACCATGAAGATAGAGAACTGGAGACTGATAACAACAGAGACTACAACTTGCAGCATTTTCCAGAGAAAAAAAAATCTTCCAGGAATGTTGAAGGTTTTGGAGCGAATGCTAACTTTACTCCTAATGATGACAAAGACACCTTGAAGAGCAAGTACAGCCAGGCATTCGGTTTCTGTGAGAAAGATACTGAACGTTTGTGCAGCCAAGATGACTACCAGGAATTTTTGAAGTGCCTCCGCAGTTATAGCAATGGGATTATTACAAGGAATGATTTACAAAATTTGGTGACTGATTTATTGGGAAAATATCCAGATCTTATGGAGGAATTTAATGATTCCTTGGAGCGCTGTGAGAATATTGATGGGTTCCTTGCTGGTGTAATGAGAAAATCTCTGAGTAGTGATGGTCATGTACTGCGATCAGTGAAGGACAAAGAGCCAAAGCGTAAAATGGAGGGATATCCAATAACCTCAGCAAGCCTGAGATCAGAACTTGCTGCTCAGGTTTTGAATGACCATTGGGTATCTGTGAAATCAGGTCTTCCAGAAGATTATCCAATACCTTCAGCAAGCCAGAGATCAGAAGTTGCTGCTCAGGTCTTGAATGACCATTGGGTATCTGTGACTTCAAGAAGTGAAGATAACTCTTTTAAACATAAGTGCAGAAATCAGTATGAAGAAAGTCTTTTCCGTTGTGAAGATGATAGGTTTGAGCTAGATATGCTGTTGGAGTCAATGAGCTCAACTTCTAAGCGAGCAGAGGAACTGTCAAACAGCATGAATGAAAATAAACTCAGTATGGAAACTCAAATTCATATTGAAGACCCCACTTTACTGACTAAGGTTGGGAAAGTAAAGAGCAATAAAGTAACTGAGCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098732 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

656

Amino Acids

75.75

Weight (kDa)

5.6

Isoelectric Point (pI)

38.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAH	PF02671	57 - 103	1.9e-13	Paired amphipathic helix repeat
PAH	PF02671	145 - 191	1.2e-12	Paired amphipathic helix repeat
PAH	PF02671	229 - 273	1.8e-14	Paired amphipathic helix repeat
PAH	PF02671	434 - 475	3.5e-15	Paired amphipathic helix repeat
Sin3_corepress	PF08295	544 - 627	3.8e-26	Sin3 family co-repressor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0009770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24060 AT5G15030 AT5G15040 AT5G15040 AT5G15040
rosa_chinensis	RchiOBHm_Chr6g0269611
rosa_laevigata	RLG00000013843 RLG00000018235
rosa_multiflora	Rmu_sc0003863.1_g000005
rosa_roxburghii	Rroxscaffold_7G00198570
rosa_rugosa	Rorug06G0049100 Rorug06G0049200 Rorug06G0049200 Rorug06G0049300 Rorug06G0049400.1
rosa_samantha	Rh6AG169200 Rh6AG169300 Rh6BG174500 Rh6CG168800 Rh6DG160700
rosa_wichuraiana	Rw6G014560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	676
AccB1I	GGYRCC	1 cut(s)	92
AccI	GTMKAC	1 cut(s)	690
AccII	CGCG	2 cut(s)	70, 72
AciI	CCGC	3 cut(s)	56, 72, 1327
AclI	AACGTT	2 cut(s)	667, 1282
AclWI	GGATC	1 cut(s)	113
AcsI	RAATTY	4 cut(s)	1310, 1369, 1415, 1899
AcuI	CTGAAG	2 cut(s)	1055, 1638
AfaI	GTAC	4 cut(s)	391, 1032, 1244, 1503
AfeI	AGCGCT	1 cut(s)	1436
AflIII	ACRYGT	1 cut(s)	414
AjnI	CCWGG	4 cut(s)	756, 1169, 1248, 1305
AluBI	AGCT	6 cut(s)	359, 638, 900, 1003, 1804, 1830
AluI	AGCT	6 cut(s)	359, 638, 900, 1003, 1804, 1830
Alw21I	GWGCWC	3 cut(s)	735, 902, 1832
Alw26I	GTCTC	2 cut(s)	1106, 1122
AlwI	GGATC	1 cut(s)	113
Aor51HI	AGCGCT	1 cut(s)	1436
ApeKI	GCWGC	4 cut(s)	1141, 1290, 1586, 1679
ApoI	RAATTY	4 cut(s)	1310, 1369, 1415, 1899
Asp700I	GAANNNNTTC	3 cut(s)	203, 467, 668
AspLEI	GCGC	2 cut(s)	72, 1437
AsuC2I	CCSGG	1 cut(s)	630
AsuHPI	GGTGA	3 cut(s)	86, 983, 1387
BanI	GGYRCC	1 cut(s)	92
BanII	GRGCYC	2 cut(s)	902, 1832
BarI	GAAGNNNNNNTAC	2 cut(s)	1226, 1258
BbsI	GAAGAC	2 cut(s)	1622, 1917
Bbv12I	GWGCWC	3 cut(s)	735, 902, 1832
BbvCI	CCTCAGC	1 cut(s)	1561
BbvI	GCAGC	4 cut(s)	1153, 1302, 1573, 1666
BccI	CCATC	3 cut(s)	1057, 1445, 1487
BciT130I	CCWGG	4 cut(s)	758, 1171, 1250, 1307
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	630
BcoDI	GTCTC	2 cut(s)	1106, 1122
BfaI	CTAG	3 cut(s)	236, 1004, 1805
BfoI	RGCGCY	1 cut(s)	1438
BfuAI	ACCTGC	1 cut(s)	676
BglII	AGATCT	1 cut(s)	1402
BisI	GCNGC	5 cut(s)	56, 1142, 1291, 1587, 1680
BlsI	GCNGC	5 cut(s)	57, 1143, 1292, 1588, 1681
Bme1390I	CCNGG	5 cut(s)	630, 758, 1171, 1250, 1307
BmiI	GGNNCC	4 cut(s)	94, 345, 609, 1457
BmrFI	CCNGG	5 cut(s)	630, 758, 1171, 1250, 1307
BmsI	GCATC	1 cut(s)	373
BpiI	GAAGAC	2 cut(s)	1622, 1917
BplI	GAGNNNNNCTC	2 cut(s)	1465, 1497
BpmI	CTGGAG	1 cut(s)	1130
Bpu10I	CCTNAGC	4 cut(s)	999, 1561, 1590, 1683
BpuEI	CTTGAG	3 cut(s)	209, 353, 473
BpuMI	CCSGG	1 cut(s)	630
BsaJI	CCNNGG	1 cut(s)	1428
BsaXI	ACNNNNNCTCC	2 cut(s)	401, 431
Bse1I	ACTGG	2 cut(s)	814, 1113
Bse3DI	GCAATG	4 cut(s)	50, 243, 507, 1345
BseBI	CCWGG	4 cut(s)	758, 1171, 1250, 1307
BseDI	CCNNGG	1 cut(s)	1428
BseGI	GGATG	1 cut(s)	805
BseMI	GCAATG	4 cut(s)	50, 243, 507, 1345
BseMII	CTCAG	9 cut(s)	990, 1050, 1475, 1562, 1575, 1604, 1697, 1897, 1953
BseNI	ACTGG	2 cut(s)	814, 1113
BseXI	GCAGC	4 cut(s)	1153, 1302, 1573, 1666
BsgI	GTGCAG	2 cut(s)	1309, 1771
Bsh1236I	CGCG	2 cut(s)	70, 72
BshNI	GGYRCC	1 cut(s)	92
BsiHKAI	GWGCWC	3 cut(s)	735, 902, 1832
BsiSI	CCGG	1 cut(s)	630
BsmAI	GTCTC	2 cut(s)	1106, 1122
BsmI	GAATGC	2 cut(s)	1201, 1253
Bsp1286I	GDGCHC	3 cut(s)	735, 902, 1832
Bsp143I	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
BspACI	CCGC	3 cut(s)	56, 72, 1327
BspCNI	CTCAG	9 cut(s)	991, 1051, 1476, 1563, 1574, 1603, 1696, 1896, 1954
BspFNI	CGCG	2 cut(s)	70, 72
BspHI	TCATGA	3 cut(s)	459, 976, 1087
BspLI	GGNNCC	4 cut(s)	94, 345, 609, 1457
BspMI	ACCTGC	1 cut(s)	676
BspPI	GGATC	1 cut(s)	113
BspQI	GCTCTTC	1 cut(s)	1229
BspT107I	GGYRCC	1 cut(s)	92
BsrDI	GCAATG	4 cut(s)	50, 243, 507, 1345
BsrI	ACTGG	2 cut(s)	814, 1113
BssECI	CCNNGG	1 cut(s)	1428
BssMI	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
BssNAI	GTATAC	1 cut(s)	691
BssT1I	CCWWGG	1 cut(s)	1428
Bst1107I	GTATAC	1 cut(s)	691
Bst2UI	CCWGG	4 cut(s)	758, 1171, 1250, 1307
Bst4CI	ACNGT	2 cut(s)	622, 1857
Bst6I	CTCTTC	2 cut(s)	8, 1229
BstAPI	GCANNNNNTGC	1 cut(s)	925
BstC8I	GCNNGC	5 cut(s)	60, 938, 1567, 1660, 1845
BstF5I	GGATG	1 cut(s)	805
BstFNI	CGCG	2 cut(s)	70, 72
BstH2I	RGCGCY	1 cut(s)	1438
BstHHI	GCGC	2 cut(s)	72, 1437
BstKTI	GATC	7 cut(s)	121, 976, 994, 1405, 1511, 1577, 1670
BstMAI	GTCTC	2 cut(s)	1106, 1122
BstMBI	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
BstMWI	GCNNNNNNNGC	6 cut(s)	925, 946, 1048, 1245, 1335, 1810
BstNI	CCWGG	4 cut(s)	758, 1171, 1250, 1307
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	5 cut(s)	628, 756, 1169, 1248, 1305
BstUI	CGCG	2 cut(s)	70, 72
BstV1I	GCAGC	4 cut(s)	1153, 1302, 1573, 1666
BstV2I	GAAGAC	2 cut(s)	1622, 1917
BstX2I	RGATCY	1 cut(s)	1402
BstYI	RGATCY	1 cut(s)	1402
BstZ17I	GTATAC	1 cut(s)	691
BtsCI	GGATG	1 cut(s)	805
BtsI	GCAGTG	1 cut(s)	877
BtsIMutI	CAGTG	3 cut(s)	807, 877, 1518
BveI	ACCTGC	1 cut(s)	676
Cac8I	GCNNGC	5 cut(s)	60, 938, 1567, 1660, 1845
CciI	TCATGA	3 cut(s)	459, 976, 1087
CfoI	GCGC	2 cut(s)	72, 1437
Csp6I	GTAC	4 cut(s)	390, 1031, 1243, 1502
CviAII	CATG	9 cut(s)	232, 460, 496, 968, 977, 1088, 1094, 1499, 1867
CviQI	GTAC	4 cut(s)	390, 1031, 1243, 1502
DpnI	GATC	7 cut(s)	120, 975, 993, 1404, 1510, 1576, 1669
DpnII	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
DraI	TTTAAA	4 cut(s)	268, 532, 651, 1741
Eam1104I	CTCTTC	2 cut(s)	8, 1229
EarI	CTCTTC	2 cut(s)	8, 1229
Ecl136II	GAGCTC	2 cut(s)	900, 1830
Eco130I	CCWWGG	1 cut(s)	1428
Eco24I	GRGCYC	2 cut(s)	902, 1832
Eco32I	GATATC	1 cut(s)	1550
Eco47III	AGCGCT	1 cut(s)	1436
Eco53kI	GAGCTC	2 cut(s)	900, 1830
Eco57I	CTGAAG	2 cut(s)	1055, 1638
EcoICRI	GAGCTC	2 cut(s)	900, 1830
EcoRII	CCWGG	4 cut(s)	756, 1169, 1248, 1305
EcoRV	GATATC	1 cut(s)	1550
EcoT14I	CCWWGG	1 cut(s)	1428
EcoT38I	GRGCYC	2 cut(s)	902, 1832
ErhI	CCWWGG	1 cut(s)	1428
FaeI	CATG	9 cut(s)	235, 463, 499, 971, 980, 1091, 1097, 1502, 1870
FalI	AAGNNNNNCTT	2 cut(s)	1758, 1790
FatI	CATG	9 cut(s)	231, 459, 495, 967, 976, 1087, 1093, 1498, 1866
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	1 cut(s)	690
Fnu4HI	GCNGC	5 cut(s)	56, 1142, 1291, 1587, 1680
FokI	GGATG	1 cut(s)	812
FriOI	GRGCYC	2 cut(s)	902, 1832
Fsp4HI	GCNGC	5 cut(s)	56, 1142, 1291, 1587, 1680
FspBI	CTAG	3 cut(s)	236, 1004, 1805
GlaI	GCGC	2 cut(s)	71, 1436
GluI	GCNGC	5 cut(s)	56, 1142, 1291, 1587, 1680
GsuI	CTGGAG	1 cut(s)	1130
HaeII	RGCGCY	1 cut(s)	1438
HapII	CCGG	1 cut(s)	630
HhaI	GCGC	2 cut(s)	72, 1437
Hin1II	CATG	9 cut(s)	235, 463, 499, 971, 980, 1091, 1097, 1502, 1870
Hin6I	GCGC	2 cut(s)	70, 1435
HinP1I	GCGC	2 cut(s)	70, 1435
HinfI	GANTC	3 cut(s)	77, 1424, 1820
HpaII	CCGG	1 cut(s)	630
HphI	GGTGA	3 cut(s)	86, 983, 1387
Hpy166II	GTNNAC	4 cut(s)	36, 691, 754, 807
Hpy188I	TCNGA	5 cut(s)	600, 1060, 1485, 1579, 1672
Hpy8I	GTNNAC	4 cut(s)	36, 691, 754, 807
HpyAV	CCTTC	9 cut(s)	193, 220, 313, 457, 577, 1030, 1175, 1510, 1662
HpyCH4III	ACNGT	2 cut(s)	622, 1857
HpyCH4IV	ACGT	5 cut(s)	416, 667, 741, 1029, 1282
HpyCH4V	TGCA	8 cut(s)	248, 512, 870, 875, 919, 1141, 1290, 1752
HpyF10VI	GCNNNNNNNGC	6 cut(s)	925, 946, 1048, 1245, 1335, 1810
HpySE526I	ACGT	5 cut(s)	416, 667, 741, 1029, 1282
Hsp92II	CATG	9 cut(s)	235, 463, 499, 971, 980, 1091, 1097, 1502, 1870
HspAI	GCGC	2 cut(s)	70, 1435
Ksp22I	TGATCA	1 cut(s)	973
Kzo9I	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
LguI	GCTCTTC	1 cut(s)	1229
LmnI	GCTCC	4 cut(s)	730, 1039, 1190, 1432
Lsp1109I	GCAGC	4 cut(s)	1153, 1302, 1573, 1666
LweI	GCATC	1 cut(s)	373
MaeI	CTAG	3 cut(s)	236, 1004, 1805
MaeII	ACGT	5 cut(s)	416, 667, 741, 1029, 1282
MaeIII	GTNAC	6 cut(s)	74, 282, 546, 1375, 1711, 1957
MalI	GATC	7 cut(s)	120, 975, 993, 1404, 1510, 1576, 1669
MboI	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
MflI	RGATCY	1 cut(s)	1402
MhlI	GDGCHC	3 cut(s)	735, 902, 1832
MluCI	AATT	9 cut(s)	104, 260, 368, 524, 591, 1310, 1369, 1415, 1899
MlyI	GAGTC	2 cut(s)	71, 1829
MmeI	TCCRAC	2 cut(s)	64, 1797
MroXI	GAANNNNTTC	3 cut(s)	203, 467, 668
MseI	TTAA	9 cut(s)	267, 297, 531, 561, 624, 650, 888, 1419, 1740
MslI	CAYNNNNRTG	1 cut(s)	1092
MspI	CCGG	1 cut(s)	630
MspR9I	CCNGG	5 cut(s)	630, 758, 1171, 1250, 1307
Mva1269I	GAATGC	2 cut(s)	1201, 1253
MvaI	CCWGG	4 cut(s)	758, 1171, 1250, 1307
MvnI	CGCG	2 cut(s)	70, 72
MwoI	GCNNNNNNNGC	6 cut(s)	925, 946, 1048, 1245, 1335, 1810
NciI	CCSGG	1 cut(s)	630
NdeII	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
NlaIII	CATG	9 cut(s)	235, 463, 499, 971, 980, 1091, 1097, 1502, 1870
NlaIV	GGNNCC	4 cut(s)	94, 345, 609, 1457
NmuCI	GTSAC	3 cut(s)	74, 1375, 1711
NspI	RCATGY	1 cut(s)	235
PagI	TCATGA	3 cut(s)	459, 976, 1087
PciSI	GCTCTTC	1 cut(s)	1229
PctI	GAATGC	2 cut(s)	1201, 1253
PdmI	GAANNNNTTC	3 cut(s)	203, 467, 668
PfeI	GAWTC	1 cut(s)	1424
PfoI	TCCNGGA	1 cut(s)	1169
PkrI	GCNGC	5 cut(s)	57, 1143, 1292, 1588, 1681
PleI	GAGTC	2 cut(s)	71, 1828
PpsI	GAGTC	2 cut(s)	71, 1828
Psp124BI	GAGCTC	2 cut(s)	902, 1832
Psp1406I	AACGTT	2 cut(s)	667, 1282
Psp6I	CCWGG	4 cut(s)	756, 1169, 1248, 1305
PspGI	CCWGG	4 cut(s)	756, 1169, 1248, 1305
PspN4I	GGNNCC	4 cut(s)	94, 345, 609, 1457
PsuI	RGATCY	1 cut(s)	1402
RsaI	GTAC	4 cut(s)	391, 1032, 1244, 1503
RsaNI	GTAC	4 cut(s)	390, 1031, 1243, 1502
RseI	CAYNNNNRTG	1 cut(s)	1092
SacI	GAGCTC	2 cut(s)	902, 1832
SapI	GCTCTTC	1 cut(s)	1229
SaqAI	TTAA	9 cut(s)	267, 297, 531, 561, 624, 650, 888, 1419, 1740
SatI	GCNGC	5 cut(s)	56, 1142, 1291, 1587, 1680
Sau3AI	GATC	7 cut(s)	118, 973, 991, 1402, 1508, 1574, 1667
SchI	GAGTC	2 cut(s)	71, 1829
ScrFI	CCNGG	5 cut(s)	630, 758, 1171, 1250, 1307
SduI	GDGCHC	3 cut(s)	735, 902, 1832
SfaNI	GCATC	1 cut(s)	373
SmiMI	CAYNNNNRTG	1 cut(s)	1092
SmlI	CTYRAG	3 cut(s)	188, 332, 452
SmoI	CTYRAG	3 cut(s)	188, 332, 452
Sse9I	AATT	9 cut(s)	104, 260, 368, 524, 591, 1310, 1369, 1415, 1899
SsiI	CCGC	3 cut(s)	56, 72, 1327
SspI	AATATT	1 cut(s)	1447
SspMI	CTAG	3 cut(s)	236, 1004, 1805
SstI	GAGCTC	2 cut(s)	902, 1832
StyD4I	CCNGG	5 cut(s)	628, 756, 1169, 1248, 1305
StyI	CCWWGG	1 cut(s)	1428
TaaI	ACNGT	2 cut(s)	622, 1857
TaiI	ACGT	5 cut(s)	419, 670, 744, 1032, 1285
TaqI	TCGA	1 cut(s)	374
TasI	AATT	9 cut(s)	104, 260, 368, 524, 591, 1310, 1369, 1415, 1899
TatI	WGTACW	2 cut(s)	1242, 1501
TauI	GCSGC	1 cut(s)	58
TfiI	GAWTC	1 cut(s)	1424
Tru1I	TTAA	9 cut(s)	267, 297, 531, 561, 624, 650, 888, 1419, 1740
Tru9I	TTAA	9 cut(s)	267, 297, 531, 561, 624, 650, 888, 1419, 1740
TscAI	CASTG	3 cut(s)	814, 877, 1518
TseFI	GTSAC	3 cut(s)	74, 1375, 1711
TseI	GCWGC	4 cut(s)	1141, 1290, 1586, 1679
Tsp45I	GTSAC	3 cut(s)	74, 1375, 1711
TspGWI	ACGGA	4 cut(s)	70, 631, 1032, 1769
TspRI	CASTG	3 cut(s)	814, 877, 1518
XapI	RAATTY	4 cut(s)	1310, 1369, 1415, 1899
XceI	RCATGY	1 cut(s)	235
XcmI	CCANNNNNNNNNTGG	2 cut(s)	286, 550
XmiI	GTMKAC	1 cut(s)	690
XmnI	GAANNNNTTC	3 cut(s)	203, 467, 668
XspI	CTAG	3 cut(s)	236, 1004, 1805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.