Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24060 AT5G15030 AT5G15040 AT5G15040 AT5G15040 |
| rosa_chinensis | RchiOBHm_Chr6g0269611 |
| rosa_laevigata | RLG00000013843 RLG00000018235 |
| rosa_multiflora | Rmu_sc0003863.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00198570 |
| rosa_rugosa | Rorug06G0049100 Rorug06G0049200 Rorug06G0049200 Rorug06G0049300 Rorug06G0049400.1 |
| rosa_samantha | Rh6AG169200 Rh6AG169300 Rh6BG174500 Rh6CG168800 Rh6DG160700 |
| rosa_wichuraiana | Rw6G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 514 |
| AccII | CGCG | 1 cut(s) | 41 |
| AccIII | TCCGGA | 1 cut(s) | 518 |
| AfaI | GTAC | 1 cut(s) | 280 |
| AflIII | ACRYGT | 2 cut(s) | 39, 303 |
| AgsI | TTSAA | 6 cut(s) | 47, 88, 103, 311, 352, 367 |
| AluBI | AGCT | 2 cut(s) | 248, 527 |
| AluI | AGCT | 2 cut(s) | 248, 527 |
| Aor13HI | TCCGGA | 1 cut(s) | 518 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 92, 356 |
| BmiI | GGNNCC | 1 cut(s) | 234 |
| BmsI | GCATC | 1 cut(s) | 262 |
| BpuEI | CTTGAG | 4 cut(s) | 98, 242, 362, 506 |
| BsaWI | WCCGGW | 1 cut(s) | 518 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 26, 56, 290, 320 |
| Bse3DI | GCAATG | 2 cut(s) | 132, 396 |
| BseAI | TCCGGA | 1 cut(s) | 518 |
| BseMI | GCAATG | 2 cut(s) | 132, 396 |
| Bsh1236I | CGCG | 1 cut(s) | 41 |
| BsiSI | CCGG | 1 cut(s) | 519 |
| Bsp13I | TCCGGA | 1 cut(s) | 518 |
| BspEI | TCCGGA | 1 cut(s) | 518 |
| BspFNI | CGCG | 1 cut(s) | 41 |
| BspLI | GGNNCC | 1 cut(s) | 234 |
| BsrDI | GCAATG | 2 cut(s) | 132, 396 |
| Bst4CI | ACNGT | 2 cut(s) | 388, 511 |
| BstFNI | CGCG | 1 cut(s) | 41 |
| BstUI | CGCG | 1 cut(s) | 41 |
| CseI | GACGC | 1 cut(s) | 47 |
| Csp6I | GTAC | 1 cut(s) | 279 |
| CviAII | CATG | 1 cut(s) | 121 |
| CviJI | RGCY | 4 cut(s) | 106, 248, 370, 527 |
| CviKI_1 | RGCY | 4 cut(s) | 106, 248, 370, 527 |
| CviQI | GTAC | 1 cut(s) | 279 |
| DraI | TTTAAA | 2 cut(s) | 157, 421 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 514 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 514 |
| FaeI | CATG | 1 cut(s) | 124 |
| FaiI | YATR | 9 cut(s) | 19, 66, 71, 122, 165, 283, 330, 335, 429 |
| FatI | CATG | 1 cut(s) | 120 |
| HapII | CCGG | 1 cut(s) | 519 |
| HgaI | GACGC | 1 cut(s) | 47 |
| Hin1II | CATG | 1 cut(s) | 124 |
| HpaII | CCGG | 1 cut(s) | 519 |
| Hpy188III | TCNNGA | 9 cut(s) | 47, 77, 85, 221, 311, 341, 349, 485, 519 |
| HpyAV | CCTTC | 5 cut(s) | 82, 109, 202, 346, 466 |
| HpyCH4III | ACNGT | 2 cut(s) | 388, 511 |
| HpyCH4IV | ACGT | 1 cut(s) | 305 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 401 |
| HpySE526I | ACGT | 1 cut(s) | 305 |
| Hsp92II | CATG | 1 cut(s) | 124 |
| Kpn2I | TCCGGA | 1 cut(s) | 518 |
| LpnPI | CCDG | 2 cut(s) | 384, 532 |
| LweI | GCATC | 1 cut(s) | 262 |
| MaeII | ACGT | 1 cut(s) | 305 |
| MaeIII | GTNAC | 2 cut(s) | 171, 435 |
| MluCI | AATT | 3 cut(s) | 149, 257, 413 |
| MluI | ACGCGT | 1 cut(s) | 39 |
| MnlI | CCTC | 7 cut(s) | 28, 73, 117, 217, 292, 337, 481 |
| MroI | TCCGGA | 1 cut(s) | 518 |
| MroXI | GAANNNNTTC | 2 cut(s) | 92, 356 |
| MseI | TTAA | 5 cut(s) | 156, 186, 420, 450, 513 |
| MspI | CCGG | 1 cut(s) | 519 |
| MvnI | CGCG | 1 cut(s) | 41 |
| NlaIII | CATG | 1 cut(s) | 124 |
| NlaIV | GGNNCC | 1 cut(s) | 234 |
| PdmI | GAANNNNTTC | 2 cut(s) | 92, 356 |
| PspN4I | GGNNCC | 1 cut(s) | 234 |
| RsaI | GTAC | 1 cut(s) | 280 |
| RsaNI | GTAC | 1 cut(s) | 279 |
| SaqAI | TTAA | 5 cut(s) | 156, 186, 420, 450, 513 |
| SetI | ASST | 9 cut(s) | 84, 130, 194, 250, 308, 348, 394, 458, 529 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| SmlI | CTYRAG | 4 cut(s) | 77, 221, 341, 485 |
| SmoI | CTYRAG | 4 cut(s) | 77, 221, 341, 485 |
| Sse9I | AATT | 3 cut(s) | 149, 257, 413 |
| TaaI | ACNGT | 2 cut(s) | 388, 511 |
| TaiI | ACGT | 1 cut(s) | 308 |
| TaqI | TCGA | 2 cut(s) | 263, 495 |
| TasI | AATT | 3 cut(s) | 149, 257, 413 |
| Tru1I | TTAA | 5 cut(s) | 156, 186, 420, 450, 513 |
| Tru9I | TTAA | 5 cut(s) | 156, 186, 420, 450, 513 |
| TspDTI | ATGAA | 2 cut(s) | 17, 281 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 175, 439 |
| XmnI | GAANNNNTTC | 2 cut(s) | 92, 356 |