Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0009770

Physical Location & Seq

Genomic Coordinates Forward (+)

24044777 .. 24058305

Gene Structure 13529 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG160700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGTATTTCGGCAAATATGTTGTTGCTAGCGTTGGAGTAGGTGCCTCACAGAAATTGCCGACAAATGATCCTCTTACATACATCAAAGAAGTGGAGGACACCTTTCAAGACCAAAGAGAAAAGTATAATATGTTTCTTGAGGTCTTGAAGGATTTCCCCTTCAAGCCTCAAAGAAATGACATGCTAGGTGTCATTGCAAGAGTAAGGGAATTGTTTAAAGGGCATACCAAGTTACTTTTGGGGTTTAATACCTTCTTGCCAAAGGGTTTTGAGATAACTCTTGAGGAAGTGGAACCAATAAAGACAGCTTCACAGAAATTGTCGATGAATGATGCTCGTACATACATCAAAGAAGTGGAGGACACGTTTCAAGACCAAAGAGAAAAGTATAATATGTTTCTTGAGGTCATGAAGGATTTCCTTTTGAAGCCTGAAAGAAATGACATGGTAGGTGTCATTGCAAGAGTAATGGAATTGTTTAAAGGGCATACCAAGTTACTTTTGGGGTTTAATACCTTCTTGCCAAAGGGTTTTGAGATAATTGTTCGGAAAGTGGAACCAATACGGACAGTTAAGCCCGGACAAGCTATCAGTTTTTTAAACAAGATGAAGAAACGTTTCCAAAATGATGAGCAGGTATACAAGTCATTCATCAACATAGTGAATATGTATGTAAAGGAGCACAAGGACGTAAATGAGGTTTACCAGGAGGTTGCTTCTCTATTTGATGACCAACCAGATTTGCTGGATGAGTTCACTGGATTTTTACCACCAGATATGTCAGCAACAACTTCAACTAATCAGGGGCAATATGGTTGCAGTGCATATCCCTGTTTTAATAAGCAGAGCTCTGCTATACCCACTTTGCAACCAATGCCTATTGGCACGCAACATAGGCTGGATAAGATTACTTCTCATGGTGATCATGATATTAGTGTTGATCGTCCTGAGCTAGATGATGACAACGGAATGATGAACGTACTGAAGGAGCAGAGAAAGCGTTTTTCTGAGATGGAGAATAGGGATAGGAGAAATCATGACCATGAAGATAGAGAACTGGAGACTGATAACAACAGAGACTACAACTTGCAGCATTTTCCAGAGAAAAAAAAATCTTCCAGGAATGTTGAAGGTTTTGGAGCGAATGCTAACTTTACTCCTAATGATGACAAAGACACCTTGAAGAGCAAGTACAGCCAGGCATTCGGTTTCTGTGAGAAAGATACTGAACGTTTGTGCAGCCAAGATGACTACCAGGAATTTTTGAAGTGCCTCCGCAGTTATAGCAATGGGATTATTACAAGGAATGATTTACAAAATTTGGTGACTGATTTATTGGGAAAATATCCAGATCTTATGGAGGAATTTAATGATTCCTTGGAGCGCTGTGAGAATATTGATGGGTTCCTTGCTGGTGTAATGAGAAAATCTCTGAGTAGTGATGGTCATGTACTGCGATCAGTGAAGGACAAAGAGCCAAAGCGTAAAATGGAGGGAGTGAAAGAAAAGGAAAGATACAGGGGGAATACTCCAAGTTATTGCCTTCTTCCGAAAGATTATCCAATAACCTCAGCAAGCCTGAGATCAGAACTTGCTGCTCAGGTTTTGAATGACCATTGGGTATCTGTGAAATCAGGTCTTCCAGAAGATTATCCAATACCTTCAGCAAGCCAGAGATCAGAAGTTGCTGCTCAGGTCTTGAATGACCATTGGGTATCTGTGACTTCAAGAAGTGAAGATAACTCTTTTAAACATAAGTGCAGAAATCAGTATGAAGAAAGTCTTTTCCGTTGTGAAGATGATAGGTTTGAGCTAGATATGCTGTTGGAGTCAATGAGCTCAACTTCTAAGCGAGCAGAGGAACTGTCAAACAGCATGAATGAAAATAAACTCAGTATGGAAACTCAAATTCATATTGAAGACCCCACTTTACTGGTGTTTGTGTACAAAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0098732 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

651

Amino Acids

75.41

Weight (kDa)

5.49

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAH	PF02671	40 - 86	1.8e-13	Paired amphipathic helix repeat
PAH	PF02671	128 - 174	1.1e-12	Paired amphipathic helix repeat
PAH	PF02671	212 - 256	1.8e-14	Paired amphipathic helix repeat
PAH	PF02671	417 - 458	3.5e-15	Paired amphipathic helix repeat
Sin3_corepress	PF08295	510 - 551	1.6e-09	Sin3 family co-repressor
Sin3_corepress	PF08295	547 - 630	3.9e-26	Sin3 family co-repressor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0009770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24060 AT5G15030 AT5G15040 AT5G15040 AT5G15040
rosa_chinensis	RchiOBHm_Chr6g0269611
rosa_laevigata	RLG00000013843 RLG00000018235
rosa_multiflora	Rmu_sc0003863.1_g000005
rosa_roxburghii	Rroxscaffold_7G00198570
rosa_rugosa	Rorug06G0049100 Rorug06G0049200 Rorug06G0049200 Rorug06G0049300 Rorug06G0049400.1
rosa_samantha	Rh6AG169200 Rh6AG169300 Rh6BG174500 Rh6CG168800 Rh6DG160700
rosa_wichuraiana	Rw6G014560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	625
AccB1I	GGYRCC	1 cut(s)	41
AccI	GTMKAC	1 cut(s)	639
AciI	CCGC	1 cut(s)	1276
AclI	AACGTT	2 cut(s)	616, 1231
AclWI	GGATC	1 cut(s)	62
AcsI	RAATTY	4 cut(s)	1259, 1318, 1364, 1908
AcuI	CTGAAG	2 cut(s)	1004, 1647
AfaI	GTAC	5 cut(s)	340, 981, 1193, 1452, 1946
AfeI	AGCGCT	1 cut(s)	1385
AflIII	ACRYGT	1 cut(s)	363
AjnI	CCWGG	4 cut(s)	705, 1118, 1197, 1254
AluBI	AGCT	6 cut(s)	308, 587, 849, 952, 1813, 1839
AluI	AGCT	6 cut(s)	308, 587, 849, 952, 1813, 1839
Alw21I	GWGCWC	3 cut(s)	684, 851, 1841
Alw26I	GTCTC	2 cut(s)	1055, 1071
AlwI	GGATC	1 cut(s)	62
Aor51HI	AGCGCT	1 cut(s)	1385
ApeKI	GCWGC	4 cut(s)	1090, 1239, 1595, 1688
ApoI	RAATTY	4 cut(s)	1259, 1318, 1364, 1908
Asp700I	GAANNNNTTC	3 cut(s)	152, 416, 617
AspLEI	GCGC	1 cut(s)	1386
AsuC2I	CCSGG	1 cut(s)	579
AsuHPI	GGTGA	2 cut(s)	932, 1336
AsuNHI	GCTAGC	1 cut(s)	26
BanI	GGYRCC	1 cut(s)	41
BanII	GRGCYC	2 cut(s)	851, 1841
BarI	GAAGNNNNNNTAC	2 cut(s)	1175, 1207
BbsI	GAAGAC	2 cut(s)	1631, 1926
Bbv12I	GWGCWC	3 cut(s)	684, 851, 1841
BbvCI	CCTCAGC	1 cut(s)	1570
BbvI	GCAGC	4 cut(s)	1102, 1251, 1582, 1675
BccI	CCATC	3 cut(s)	1006, 1394, 1436
BciT130I	CCWGG	4 cut(s)	707, 1120, 1199, 1256
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	1 cut(s)	579
BcoDI	GTCTC	2 cut(s)	1055, 1071
BfaI	CTAG	4 cut(s)	27, 185, 953, 1814
BfoI	RGCGCY	1 cut(s)	1387
BfuAI	ACCTGC	1 cut(s)	625
BglII	AGATCT	1 cut(s)	1351
BisI	GCNGC	4 cut(s)	1091, 1240, 1596, 1689
BlsI	GCNGC	4 cut(s)	1092, 1241, 1597, 1690
Bme1390I	CCNGG	5 cut(s)	579, 707, 1120, 1199, 1256
BmiI	GGNNCC	4 cut(s)	43, 294, 558, 1406
BmrFI	CCNGG	5 cut(s)	579, 707, 1120, 1199, 1256
BmsI	GCATC	1 cut(s)	322
BmtI	GCTAGC	1 cut(s)	30
BpiI	GAAGAC	2 cut(s)	1631, 1926
BplI	GAGNNNNNCTC	2 cut(s)	1414, 1446
BpmI	CTGGAG	1 cut(s)	1079
Bpu10I	CCTNAGC	4 cut(s)	948, 1570, 1599, 1692
BpuEI	CTTGAG	3 cut(s)	158, 302, 422
BpuMI	CCSGG	1 cut(s)	579
BsaJI	CCNNGG	1 cut(s)	1377
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bse1I	ACTGG	3 cut(s)	763, 1062, 1938
Bse3DI	GCAATG	3 cut(s)	192, 456, 1294
BseBI	CCWGG	4 cut(s)	707, 1120, 1199, 1256
BseDI	CCNNGG	1 cut(s)	1377
BseGI	GGATG	1 cut(s)	754
BseMI	GCAATG	3 cut(s)	192, 456, 1294
BseMII	CTCAG	8 cut(s)	939, 999, 1424, 1571, 1584, 1613, 1706, 1906
BseNI	ACTGG	3 cut(s)	763, 1062, 1938
BseXI	GCAGC	4 cut(s)	1102, 1251, 1582, 1675
BsgI	GTGCAG	2 cut(s)	1258, 1780
BshNI	GGYRCC	1 cut(s)	41
BsiHKAI	GWGCWC	3 cut(s)	684, 851, 1841
BsiSI	CCGG	1 cut(s)	579
BsmAI	GTCTC	2 cut(s)	1055, 1071
BsmI	GAATGC	2 cut(s)	1150, 1202
Bsp1286I	GDGCHC	3 cut(s)	684, 851, 1841
Bsp1407I	TGTACA	1 cut(s)	1944
Bsp143I	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
BspACI	CCGC	1 cut(s)	1276
BspCNI	CTCAG	8 cut(s)	940, 1000, 1425, 1572, 1583, 1612, 1705, 1905
BspHI	TCATGA	3 cut(s)	408, 925, 1036
BspLI	GGNNCC	4 cut(s)	43, 294, 558, 1406
BspMI	ACCTGC	1 cut(s)	625
BspOI	GCTAGC	1 cut(s)	30
BspPI	GGATC	1 cut(s)	62
BspQI	GCTCTTC	1 cut(s)	1178
BspT107I	GGYRCC	1 cut(s)	41
BsrDI	GCAATG	3 cut(s)	192, 456, 1294
BsrGI	TGTACA	1 cut(s)	1944
BsrI	ACTGG	3 cut(s)	763, 1062, 1938
BssECI	CCNNGG	1 cut(s)	1377
BssMI	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
BssNAI	GTATAC	1 cut(s)	640
BssT1I	CCWWGG	1 cut(s)	1377
Bst1107I	GTATAC	1 cut(s)	640
Bst2UI	CCWGG	4 cut(s)	707, 1120, 1199, 1256
Bst4CI	ACNGT	2 cut(s)	571, 1866
Bst6I	CTCTTC	1 cut(s)	1178
BstAPI	GCANNNNNTGC	1 cut(s)	874
BstAUI	TGTACA	1 cut(s)	1944
BstC8I	GCNNGC	5 cut(s)	28, 887, 1576, 1669, 1854
BstDEI	CTNAG	9 cut(s)	948, 1008, 1433, 1570, 1580, 1599, 1692, 1848, 1892
BstF5I	GGATG	1 cut(s)	754
BstH2I	RGCGCY	1 cut(s)	1387
BstHHI	GCGC	1 cut(s)	1386
BstKTI	GATC	7 cut(s)	70, 925, 943, 1354, 1460, 1586, 1679
BstMAI	GTCTC	2 cut(s)	1055, 1071
BstMBI	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
BstMWI	GCNNNNNNNGC	6 cut(s)	874, 895, 997, 1194, 1284, 1819
BstNI	CCWGG	4 cut(s)	707, 1120, 1199, 1256
BstNSI	RCATGY	1 cut(s)	184
BstSCI	CCNGG	5 cut(s)	577, 705, 1118, 1197, 1254
BstV1I	GCAGC	4 cut(s)	1102, 1251, 1582, 1675
BstV2I	GAAGAC	2 cut(s)	1631, 1926
BstX2I	RGATCY	1 cut(s)	1351
BstXI	CCANNNNNNTGG	1 cut(s)	1933
BstYI	RGATCY	1 cut(s)	1351
BstZ17I	GTATAC	1 cut(s)	640
BtsCI	GGATG	1 cut(s)	754
BtsI	GCAGTG	1 cut(s)	826
BtsIMutI	CAGTG	3 cut(s)	756, 826, 1467
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	5 cut(s)	28, 887, 1576, 1669, 1854
CciI	TCATGA	3 cut(s)	408, 925, 1036
CfoI	GCGC	1 cut(s)	1386
Csp6I	GTAC	5 cut(s)	339, 980, 1192, 1451, 1945
CviAII	CATG	9 cut(s)	181, 409, 445, 917, 926, 1037, 1043, 1448, 1876
CviQI	GTAC	5 cut(s)	339, 980, 1192, 1451, 1945
DdeI	CTNAG	9 cut(s)	948, 1008, 1433, 1570, 1580, 1599, 1692, 1848, 1892
DpnI	GATC	7 cut(s)	69, 924, 942, 1353, 1459, 1585, 1678
DpnII	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
DraI	TTTAAA	4 cut(s)	217, 481, 600, 1750
Eam1104I	CTCTTC	1 cut(s)	1178
EarI	CTCTTC	1 cut(s)	1178
Ecl136II	GAGCTC	2 cut(s)	849, 1839
Eco130I	CCWWGG	1 cut(s)	1377
Eco24I	GRGCYC	2 cut(s)	851, 1841
Eco47III	AGCGCT	1 cut(s)	1385
Eco53kI	GAGCTC	2 cut(s)	849, 1839
Eco57I	CTGAAG	2 cut(s)	1004, 1647
EcoICRI	GAGCTC	2 cut(s)	849, 1839
EcoRII	CCWGG	4 cut(s)	705, 1118, 1197, 1254
EcoT14I	CCWWGG	1 cut(s)	1377
EcoT38I	GRGCYC	2 cut(s)	851, 1841
ErhI	CCWWGG	1 cut(s)	1377
FaeI	CATG	9 cut(s)	184, 412, 448, 920, 929, 1040, 1046, 1451, 1879
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FatI	CATG	9 cut(s)	180, 408, 444, 916, 925, 1036, 1042, 1447, 1875
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	1 cut(s)	639
Fnu4HI	GCNGC	4 cut(s)	1091, 1240, 1596, 1689
FokI	GGATG	1 cut(s)	761
FriOI	GRGCYC	2 cut(s)	851, 1841
Fsp4HI	GCNGC	4 cut(s)	1091, 1240, 1596, 1689
FspBI	CTAG	4 cut(s)	27, 185, 953, 1814
GlaI	GCGC	1 cut(s)	1385
GluI	GCNGC	4 cut(s)	1091, 1240, 1596, 1689
GsuI	CTGGAG	1 cut(s)	1079
HaeII	RGCGCY	1 cut(s)	1387
HapII	CCGG	1 cut(s)	579
HhaI	GCGC	1 cut(s)	1386
Hin1II	CATG	9 cut(s)	184, 412, 448, 920, 929, 1040, 1046, 1451, 1879
Hin6I	GCGC	1 cut(s)	1384
HinP1I	GCGC	1 cut(s)	1384
HinfI	GANTC	2 cut(s)	1373, 1829
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	2 cut(s)	932, 1336
Hpy166II	GTNNAC	4 cut(s)	640, 703, 756, 1945
Hpy188I	TCNGA	7 cut(s)	549, 1009, 1434, 1551, 1588, 1681, 1955
Hpy8I	GTNNAC	4 cut(s)	640, 703, 756, 1945
HpyCH4III	ACNGT	2 cut(s)	571, 1866
HpyCH4IV	ACGT	5 cut(s)	365, 616, 690, 978, 1231
HpyCH4V	TGCA	8 cut(s)	197, 461, 819, 824, 868, 1090, 1239, 1761
HpyF10VI	GCNNNNNNNGC	6 cut(s)	874, 895, 997, 1194, 1284, 1819
HpyF3I	CTNAG	9 cut(s)	948, 1008, 1433, 1570, 1580, 1599, 1692, 1848, 1892
HpySE526I	ACGT	5 cut(s)	365, 616, 690, 978, 1231
Hsp92II	CATG	9 cut(s)	184, 412, 448, 920, 929, 1040, 1046, 1451, 1879
HspAI	GCGC	1 cut(s)	1384
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
LguI	GCTCTTC	1 cut(s)	1178
LmnI	GCTCC	4 cut(s)	679, 988, 1139, 1381
Lsp1109I	GCAGC	4 cut(s)	1102, 1251, 1582, 1675
LweI	GCATC	1 cut(s)	322
MaeI	CTAG	4 cut(s)	27, 185, 953, 1814
MaeII	ACGT	5 cut(s)	365, 616, 690, 978, 1231
MaeIII	GTNAC	4 cut(s)	231, 495, 1324, 1720
MalI	GATC	7 cut(s)	69, 924, 942, 1353, 1459, 1585, 1678
MboI	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
MflI	RGATCY	1 cut(s)	1351
MhlI	GDGCHC	3 cut(s)	684, 851, 1841
MluCI	AATT	9 cut(s)	53, 209, 317, 473, 540, 1259, 1318, 1364, 1908
MlyI	GAGTC	1 cut(s)	1838
MmeI	TCCRAC	2 cut(s)	13, 1806
MroXI	GAANNNNTTC	3 cut(s)	152, 416, 617
MseI	TTAA	9 cut(s)	216, 246, 480, 510, 573, 599, 837, 1368, 1749
MslI	CAYNNNNRTG	1 cut(s)	1041
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	5 cut(s)	579, 707, 1120, 1199, 1256
Mva1269I	GAATGC	2 cut(s)	1150, 1202
MvaI	CCWGG	4 cut(s)	707, 1120, 1199, 1256
MwoI	GCNNNNNNNGC	6 cut(s)	874, 895, 997, 1194, 1284, 1819
NciI	CCSGG	1 cut(s)	579
NdeII	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
NheI	GCTAGC	1 cut(s)	26
NlaIII	CATG	9 cut(s)	184, 412, 448, 920, 929, 1040, 1046, 1451, 1879
NlaIV	GGNNCC	4 cut(s)	43, 294, 558, 1406
NmuCI	GTSAC	2 cut(s)	1324, 1720
NspI	RCATGY	1 cut(s)	184
PagI	TCATGA	3 cut(s)	408, 925, 1036
PciSI	GCTCTTC	1 cut(s)	1178
PctI	GAATGC	2 cut(s)	1150, 1202
PdmI	GAANNNNTTC	3 cut(s)	152, 416, 617
PfeI	GAWTC	1 cut(s)	1373
PfoI	TCCNGGA	1 cut(s)	1118
PkrI	GCNGC	4 cut(s)	1092, 1241, 1597, 1690
PleI	GAGTC	1 cut(s)	1837
PpsI	GAGTC	1 cut(s)	1837
Psp124BI	GAGCTC	2 cut(s)	851, 1841
Psp1406I	AACGTT	2 cut(s)	616, 1231
Psp6I	CCWGG	4 cut(s)	705, 1118, 1197, 1254
PspGI	CCWGG	4 cut(s)	705, 1118, 1197, 1254
PspN4I	GGNNCC	4 cut(s)	43, 294, 558, 1406
PsuI	RGATCY	1 cut(s)	1351
RsaI	GTAC	5 cut(s)	340, 981, 1193, 1452, 1946
RsaNI	GTAC	5 cut(s)	339, 980, 1192, 1451, 1945
RseI	CAYNNNNRTG	1 cut(s)	1041
SacI	GAGCTC	2 cut(s)	851, 1841
SapI	GCTCTTC	1 cut(s)	1178
SaqAI	TTAA	9 cut(s)	216, 246, 480, 510, 573, 599, 837, 1368, 1749
SatI	GCNGC	4 cut(s)	1091, 1240, 1596, 1689
Sau3AI	GATC	7 cut(s)	67, 922, 940, 1351, 1457, 1583, 1676
SchI	GAGTC	1 cut(s)	1838
ScrFI	CCNGG	5 cut(s)	579, 707, 1120, 1199, 1256
SduI	GDGCHC	3 cut(s)	684, 851, 1841
SfaNI	GCATC	1 cut(s)	322
SmiMI	CAYNNNNRTG	1 cut(s)	1041
SmlI	CTYRAG	3 cut(s)	137, 281, 401
SmoI	CTYRAG	3 cut(s)	137, 281, 401
Sse9I	AATT	9 cut(s)	53, 209, 317, 473, 540, 1259, 1318, 1364, 1908
SsiI	CCGC	1 cut(s)	1276
SspI	AATATT	1 cut(s)	1396
SspMI	CTAG	4 cut(s)	27, 185, 953, 1814
SstI	GAGCTC	2 cut(s)	851, 1841
StyD4I	CCNGG	5 cut(s)	577, 705, 1118, 1197, 1254
StyI	CCWWGG	1 cut(s)	1377
TaaI	ACNGT	2 cut(s)	571, 1866
TaiI	ACGT	5 cut(s)	368, 619, 693, 981, 1234
TaqI	TCGA	1 cut(s)	323
TasI	AATT	9 cut(s)	53, 209, 317, 473, 540, 1259, 1318, 1364, 1908
TatI	WGTACW	3 cut(s)	1191, 1450, 1944
TfiI	GAWTC	1 cut(s)	1373
Tru1I	TTAA	9 cut(s)	216, 246, 480, 510, 573, 599, 837, 1368, 1749
Tru9I	TTAA	9 cut(s)	216, 246, 480, 510, 573, 599, 837, 1368, 1749
TscAI	CASTG	3 cut(s)	763, 826, 1467
TseFI	GTSAC	2 cut(s)	1324, 1720
TseI	GCWGC	4 cut(s)	1090, 1239, 1595, 1688
Tsp45I	GTSAC	2 cut(s)	1324, 1720
TspGWI	ACGGA	3 cut(s)	580, 981, 1778
TspRI	CASTG	3 cut(s)	763, 826, 1467
XapI	RAATTY	4 cut(s)	1259, 1318, 1364, 1908
XceI	RCATGY	1 cut(s)	184
XcmI	CCANNNNNNNNNTGG	2 cut(s)	235, 499
XmiI	GTMKAC	1 cut(s)	639
XmnI	GAANNNNTTC	3 cut(s)	152, 416, 617
XspI	CTAG	4 cut(s)	27, 185, 953, 1814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.