Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003042

Physical Location & Seq

Genomic Coordinates Forward (+)

14845503 .. 14865741

Gene Structure 20239 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0109400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCTTGCGCCTCTCCAACGGCACTCAGTCTCCCCCTCTGCCGTCTCCCATCACCCCGCACCAATCTCTTCTTGCCCCAGCTCCCACCCGGAAACAGTTCATCTCTTCGTCGCCAGAGTTCACCCCTCGTCCGGTGCTCCGGAGACTCTGACGTATTTGACGCCAAGGTGTTCCGTAAGAACCTGAGCAGAAGCAAGAACTACAATCTCAGAGGGTTCGGGCACCAGGAAGAGACTCTCCAGCTCATGAACCACCAGTACACCAGTGATATAATCAAGACGTTGAAGGAGAATGAGTTCGAGTACACATGGGGAAACGTGACTGTGAAACTTGCTGAGGCCAACGGGTTCTGTTGGGGAGTTGAGCGGGCTGTGCAGATTGCTTACGAAGCTAGGAAGCAATTTCCTGATGAAAGGATTTGGATTACCAACCAGATCATCCATAATCCAACGGTGAATAAGCGGTTGGACGAGATGGAGGTGAAGAGGGTCCCGAAAGAGGAAGGGAGAAAGCAATTTGAGGTAGTGGACAAGGGTGATGTGGTCATTTTACCTGCCTTTGGAGCTGCAGTGGATGAGATGCTCATCTTGAGTGACAAAAATGTTCAAATTGTGGACACTACTTGCCCTTGGGTTTCAAAGGTTTGGAATACTGTAGAGAAGCACAAGACAGGGAAGTACACTTCAATTATTCATGGTGTATATGATCATGAGGAAGCTGTAGCAACTGCTTCATATGCTGGAAAATACGTTACTGTGAAAAATATGGATGAGGCATCATATGTGTGTGACTATATTCTTGGTGGTGAACTTAATGGGTCTAGCTCAACTAAAGAGGCATTTCAGGAGAAATTTAAGAAAGCAATTTCTTCAGGGTTCGATCCGGACAAAGATCTGGTTAAATGTGGGATTGCAAATCAGACTACAATGCTCATGACTGAGACAGACAGCATTGGAAAACTAGTAGAGAAAACAATGATGCGCAAGTATGGAGTGGAGAATATCAATGACCACTTTGTGAGCTTCAACACAATATGTTATGCGACTCAGGAGCGACAAGATGCAATGCTCAAGTTAGTTGAGGAAAAGCTAGATTTTATATTAGTAGTTGGAGGGTGGAACTCAGATAACACCTCTCACCTACAAGAGATGGCAGAACTTCGCGGAATTTCTTCGTATTGGATTGATAGTGAGGAGAGAATAGGCCCTGGAAACCGAATAGCTTATAAACTCAAACACGGCGAGTTGGTTGAGAACGAAAACTGGCTGCCTGAGGGTCCTGTGACTATTGGTGTGACATCTGGTGCCTCTACTCCAAATAAGGTTGTTGAAGACGCTCTTATCAAGGTGTTTGATATCAAGCGTAAAGAGGCCCTGCAACTAGGCATAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000506 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019538 GO:0019637 GO:0022414 GO:0030154 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0034645 GO:0036211 GO:0040007 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0071704 GO:0071840 GO:0090407 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1903509 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

GPI2

Protein Analysis

464

Amino Acids

52.19

Weight (kDa)

5.84

Isoelectric Point (pI)

36.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LYTB	PF02401	109 - 447	2.5e-76	LytB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34980
fragaria_vesca	FvH4_1g22930 FvH4_2g14913
malus_domestica	MD05G1011700.v1.1 MD12G1011000.v1.1
prunus_persica	Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.7G012900_v2.0.a1 Prupe.8G016600_v2.0.a1
pyrus_communis	pycom12g00850
rosa_chinensis	RchiOBHm_Chr3g0496061 RchiOBHm_Chr6g0277521
rosa_laevigata	RLG00000013295 RLG00000022566
rosa_multiflora	Rmu_sc0003910.1_g000008
rosa_roxburghii	Rroxscaffold_6G00389600 Rroxscaffold_7G00191250
rosa_rugosa	Rorug03G0279300 Rorug06G0109400 Rorug06G0109500
rosa_samantha	Rh3AG326300 Rh3BG362600 Rh3CG358700 Rh3DG362000 Rh6AG219700 Rh6BG223600 Rh6CG226100 Rh6DG216500
rosa_wichuraiana	Rw3G028570 Rw6G019240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1227
Acc16I	TGCGCA	1 cut(s)	983
Acc36I	ACCTGC	1 cut(s)	562
AccB1I	GGYRCC	2 cut(s)	222, 1304
AccBSI	CCGCTC	1 cut(s)	367
AccII	CGCG	1 cut(s)	1164
AccIII	TCCGGA	2 cut(s)	140, 883
AciI	CCGC	4 cut(s)	58, 367, 463, 1164
AclWI	GGATC	1 cut(s)	875
AcsI	RAATTY	2 cut(s)	851, 1167
AcuI	CTGAAG	1 cut(s)	855
AcyI	GRCGYC	1 cut(s)	162
AdeI	CACNNNGTG	1 cut(s)	1018
AfaI	GTAC	3 cut(s)	260, 305, 680
AfiI	CCNNNNNNNGG	3 cut(s)	132, 499, 560
AgsI	TTSAA	6 cut(s)	286, 608, 639, 687, 1027, 1331
AhlI	ACTAGT	1 cut(s)	961
AjnI	CCWGG	2 cut(s)	225, 1207
AjuI	GAANNNNNNNTTGG	2 cut(s)	449, 481
AloI	GAACNNNNNNTCC	2 cut(s)	281, 313
AluBI	AGCT	9 cut(s)	82, 244, 392, 566, 719, 825, 1023, 1090, 1223
AluI	AGCT	9 cut(s)	82, 244, 392, 566, 719, 825, 1023, 1090, 1223
Alw21I	GWGCWC	1 cut(s)	140
Alw26I	GTCTC	5 cut(s)	35, 50, 138, 227, 935
AlwI	GGATC	1 cut(s)	875
Aor13HI	TCCGGA	2 cut(s)	140, 883
AoxI	GGCC	3 cut(s)	339, 1204, 1371
ApeKI	GCWGC	2 cut(s)	566, 1267
ApoI	RAATTY	2 cut(s)	851, 1167
Asp700I	GAANNNNTTC	3 cut(s)	97, 296, 1171
AspLEI	GCGC	2 cut(s)	11, 984
AspS9I	GGNCC	4 cut(s)	490, 1205, 1277, 1372
AsuC2I	CCSGG	1 cut(s)	90
AsuHPI	GGTGA	7 cut(s)	45, 114, 466, 493, 548, 818, 1130
AvaII	GGWCC	2 cut(s)	490, 1277
AxyI	CCTNAGG	1 cut(s)	1272
BaeGI	GKGCMC	1 cut(s)	225
BanI	GGYRCC	2 cut(s)	222, 1304
BbsI	GAAGAC	1 cut(s)	1338
Bbv12I	GWGCWC	1 cut(s)	140
BbvCI	CCTCAGC	1 cut(s)	336
BbvI	GCAGC	2 cut(s)	553, 1254
BccI	CCATC	3 cut(s)	58, 469, 1144
BceAI	ACGGC	3 cut(s)	27, 36, 1255
BciT130I	CCWGG	2 cut(s)	227, 1209
BclI	TGATCA	1 cut(s)	706
BcnI	CCSGG	1 cut(s)	90
BcoDI	GTCTC	5 cut(s)	35, 50, 138, 227, 935
BcuI	ACTAGT	1 cut(s)	961
BfaI	CTAG	6 cut(s)	393, 822, 962, 1091, 1382, 1393
BfmI	CTRYAG	3 cut(s)	567, 654, 720
BfuAI	ACCTGC	1 cut(s)	562
BglII	AGATCT	1 cut(s)	892
BisI	GCNGC	2 cut(s)	567, 1268
BlsI	GCNGC	2 cut(s)	568, 1269
Bme1390I	CCNGG	3 cut(s)	90, 227, 1209
Bme18I	GGWCC	2 cut(s)	490, 1277
BmgT120I	GGNCC	4 cut(s)	490, 1205, 1277, 1372
BmiI	GGNNCC	5 cut(s)	224, 491, 492, 1278, 1306
BmrFI	CCNGG	3 cut(s)	90, 227, 1209
BmsI	GCATC	4 cut(s)	570, 785, 969, 1051
BpiI	GAAGAC	1 cut(s)	1338
BpmI	CTGGAG	1 cut(s)	224
Bpu10I	CCTNAGC	2 cut(s)	185, 336
BpuEI	CTTGAG	2 cut(s)	610, 1055
BpuMI	CCSGG	1 cut(s)	90
BsaBI	GATNNNNATC	1 cut(s)	584
BsaHI	GRCGYC	1 cut(s)	162
BsaJI	CCNNGG	3 cut(s)	165, 629, 1207
BsaWI	WCCGGW	3 cut(s)	132, 140, 883
BsaXI	ACNNNNNCTCC	6 cut(s)	15, 45, 281, 311, 555, 585
Bsc4I	CCNNNNNNNGG	3 cut(s)	132, 499, 560
Bse1I	ACTGG	3 cut(s)	256, 264, 1268
Bse21I	CCTNAGG	1 cut(s)	1272
Bse3DI	GCAATG	1 cut(s)	1071
Bse8I	GATNNNNATC	1 cut(s)	584
BseAI	TCCGGA	2 cut(s)	140, 883
BseBI	CCWGG	2 cut(s)	227, 1209
BseDI	CCNNGG	3 cut(s)	165, 629, 1207
BseGI	GGATG	3 cut(s)	438, 580, 775
BseJI	GATNNNNATC	1 cut(s)	584
BseLI	CCNNNNNNNGG	3 cut(s)	132, 499, 560
BseMI	GCAATG	1 cut(s)	1071
BseMII	CTCAG	8 cut(s)	40, 176, 223, 327, 930, 1061, 1137, 1263
BseNI	ACTGG	3 cut(s)	256, 264, 1268
BseRI	GAGGAG	1 cut(s)	1208
BseSI	GKGCMC	1 cut(s)	225
BseXI	GCAGC	2 cut(s)	553, 1254
BseYI	CCCAGC	1 cut(s)	78
BsgI	GTGCAG	1 cut(s)	395
Bsh1236I	CGCG	1 cut(s)	1164
BshFI	GGCC	3 cut(s)	341, 1206, 1373
BshNI	GGYRCC	2 cut(s)	222, 1304
BsiHKAI	GWGCWC	1 cut(s)	140
BsiSI	CCGG	4 cut(s)	90, 133, 141, 884
BslFI	GGGAC	1 cut(s)	476
BslI	CCNNNNNNNGG	3 cut(s)	132, 499, 560
BsmAI	GTCTC	5 cut(s)	35, 50, 138, 227, 935
BsmBI	CGTCTC	1 cut(s)	50
BsmFI	GGGAC	1 cut(s)	476
BsnI	GGCC	3 cut(s)	341, 1206, 1373
Bsp1286I	GDGCHC	2 cut(s)	140, 225
Bsp13I	TCCGGA	2 cut(s)	140, 883
Bsp143I	GATC	4 cut(s)	435, 706, 880, 892
BspACI	CCGC	4 cut(s)	58, 367, 463, 1164
BspANI	GGCC	3 cut(s)	341, 1206, 1373
BspCNI	CTCAG	8 cut(s)	39, 177, 222, 328, 931, 1060, 1136, 1264
BspEI	TCCGGA	2 cut(s)	140, 883
BspFNI	CGCG	1 cut(s)	1164
BspHI	TCATGA	3 cut(s)	246, 709, 933
BspLI	GGNNCC	5 cut(s)	224, 491, 492, 1278, 1306
BspMAI	CTGCAG	1 cut(s)	571
BspMI	ACCTGC	1 cut(s)	562
BspPI	GGATC	1 cut(s)	875
BspT107I	GGYRCC	2 cut(s)	222, 1304
BsrBI	CCGCTC	1 cut(s)	367
BsrDI	GCAATG	1 cut(s)	1071
BsrI	ACTGG	3 cut(s)	256, 264, 1268
BssECI	CCNNGG	3 cut(s)	165, 629, 1207
BssMI	GATC	4 cut(s)	435, 706, 880, 892
BssNI	GRCGYC	1 cut(s)	162
BssT1I	CCWWGG	2 cut(s)	165, 629
Bst2UI	CCWGG	2 cut(s)	227, 1209
Bst4CI	ACNGT	5 cut(s)	98, 325, 454, 655, 757
Bst6I	CTCTTC	4 cut(s)	74, 111, 225, 479
BstACI	GRCGYC	1 cut(s)	162
BstC8I	GCNNGC	2 cut(s)	7, 369
BstDEI	CTNAG	8 cut(s)	26, 185, 209, 336, 939, 1047, 1123, 1272
BstF5I	GGATG	3 cut(s)	438, 580, 775
BstFNI	CGCG	1 cut(s)	1164
BstHHI	GCGC	2 cut(s)	11, 984
BstKTI	GATC	4 cut(s)	438, 709, 883, 895
BstMAI	GTCTC	5 cut(s)	35, 50, 138, 227, 935
BstMBI	GATC	4 cut(s)	435, 706, 880, 892
BstMWI	GCNNNNNNNGC	4 cut(s)	373, 389, 563, 737
BstNI	CCWGG	2 cut(s)	227, 1209
BstSCI	CCNGG	3 cut(s)	88, 225, 1207
BstSFI	CTRYAG	3 cut(s)	567, 654, 720
BstSLI	GKGCMC	1 cut(s)	225
BstUI	CGCG	1 cut(s)	1164
BstV1I	GCAGC	2 cut(s)	553, 1254
BstV2I	GAAGAC	1 cut(s)	1338
BstX2I	RGATCY	1 cut(s)	892
BstYI	RGATCY	1 cut(s)	892
Bsu36I	CCTNAGG	1 cut(s)	1272
BsuRI	GGCC	3 cut(s)	341, 1206, 1373
BtsCI	GGATG	3 cut(s)	438, 580, 775
BtsI	GCAGTG	1 cut(s)	576
BtsIMutI	CAGTG	2 cut(s)	271, 576
BveI	ACCTGC	1 cut(s)	562
Cac8I	GCNNGC	2 cut(s)	7, 369
CciI	TCATGA	3 cut(s)	246, 709, 933
CfoI	GCGC	2 cut(s)	11, 984
Cfr13I	GGNCC	4 cut(s)	490, 1205, 1277, 1372
CseI	GACGC	2 cut(s)	170, 1343
Csp6I	GTAC	3 cut(s)	259, 304, 679
CviAII	CATG	5 cut(s)	247, 309, 695, 710, 934
CviQI	GTAC	3 cut(s)	259, 304, 679
DdeI	CTNAG	8 cut(s)	26, 185, 209, 336, 939, 1047, 1123, 1272
DpnI	GATC	4 cut(s)	437, 708, 882, 894
DpnII	GATC	4 cut(s)	435, 706, 880, 892
DraIII	CACNNNGTG	1 cut(s)	1018
Eam1104I	CTCTTC	4 cut(s)	74, 111, 225, 479
EarI	CTCTTC	4 cut(s)	74, 111, 225, 479
Eco130I	CCWWGG	2 cut(s)	165, 629
Eco32I	GATATC	1 cut(s)	1357
Eco47I	GGWCC	2 cut(s)	490, 1277
Eco57I	CTGAAG	1 cut(s)	855
Eco81I	CCTNAGG	1 cut(s)	1272
EcoO109I	RGGNCCY	4 cut(s)	490, 1205, 1277, 1372
EcoRII	CCWGG	2 cut(s)	225, 1207
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	2 cut(s)	165, 629
ErhI	CCWWGG	2 cut(s)	165, 629
Esp3I	CGTCTC	1 cut(s)	50
FaeI	CATG	5 cut(s)	250, 312, 698, 713, 937
FalI	AAGNNNNNCTT	2 cut(s)	1323, 1355
FaqI	GGGAC	1 cut(s)	476
FatI	CATG	5 cut(s)	246, 308, 694, 709, 933
FauI	CCCGC	2 cut(s)	65, 360
FauNDI	CATATG	2 cut(s)	736, 781
FbaI	TGATCA	1 cut(s)	706
Fnu4HI	GCNGC	2 cut(s)	567, 1268
FokI	GGATG	3 cut(s)	425, 587, 782
Fsp4HI	GCNGC	2 cut(s)	567, 1268
FspBI	CTAG	6 cut(s)	393, 822, 962, 1091, 1382, 1393
FspI	TGCGCA	1 cut(s)	983
GlaI	GCGC	2 cut(s)	10, 983
GluI	GCNGC	2 cut(s)	567, 1268
GsaI	CCCAGC	1 cut(s)	82
GsuI	CTGGAG	1 cut(s)	224
HaeIII	GGCC	3 cut(s)	341, 1206, 1373
HapII	CCGG	4 cut(s)	90, 133, 141, 884
HgaI	GACGC	2 cut(s)	170, 1343
HhaI	GCGC	2 cut(s)	11, 984
Hin1I	GRCGYC	1 cut(s)	162
Hin1II	CATG	5 cut(s)	250, 312, 698, 713, 937
Hin6I	GCGC	2 cut(s)	9, 982
HinP1I	GCGC	2 cut(s)	9, 982
HinfI	GANTC	3 cut(s)	146, 235, 1045
HpaII	CCGG	4 cut(s)	90, 133, 141, 884
HphI	GGTGA	7 cut(s)	45, 114, 466, 493, 548, 818, 1130
Hpy166II	GTNNAC	7 cut(s)	122, 261, 306, 529, 616, 681, 809
Hpy188I	TCNGA	4 cut(s)	151, 212, 921, 1126
Hpy8I	GTNNAC	7 cut(s)	122, 261, 306, 529, 616, 681, 809
Hpy99I	CGWCG	1 cut(s)	114
HpyAV	CCTTC	2 cut(s)	280, 497
HpyCH4III	ACNGT	5 cut(s)	98, 325, 454, 655, 757
HpyCH4IV	ACGT	4 cut(s)	153, 281, 318, 750
HpyCH4V	TGCA	5 cut(s)	376, 569, 914, 1064, 1378
HpyF10VI	GCNNNNNNNGC	4 cut(s)	373, 389, 563, 737
HpyF3I	CTNAG	8 cut(s)	26, 185, 209, 336, 939, 1047, 1123, 1272
HpySE526I	ACGT	4 cut(s)	153, 281, 318, 750
Hsp92I	GRCGYC	1 cut(s)	162
Hsp92II	CATG	5 cut(s)	250, 312, 698, 713, 937
HspAI	GCGC	2 cut(s)	9, 982
KflI	GGGWCCC	1 cut(s)	490
Kpn2I	TCCGGA	2 cut(s)	140, 883
Ksp22I	TGATCA	1 cut(s)	706
Kzo9I	GATC	4 cut(s)	435, 706, 880, 892
LmnI	GCTCC	4 cut(s)	87, 143, 563, 1051
Lsp1109I	GCAGC	2 cut(s)	553, 1254
LweI	GCATC	4 cut(s)	570, 785, 969, 1051
MaeI	CTAG	6 cut(s)	393, 822, 962, 1091, 1382, 1393
MaeII	ACGT	4 cut(s)	153, 281, 318, 750
MaeIII	GTNAC	6 cut(s)	319, 593, 751, 788, 1282, 1294
MalI	GATC	4 cut(s)	437, 708, 882, 894
MbiI	CCGCTC	1 cut(s)	367
MboI	GATC	4 cut(s)	435, 706, 880, 892
MboII	GAAGA	7 cut(s)	61, 98, 242, 496, 861, 1164, 1343
MflI	RGATCY	1 cut(s)	892
MhlI	GDGCHC	2 cut(s)	140, 225
MluCI	AATT	7 cut(s)	401, 515, 609, 687, 851, 864, 1167
MlyI	GAGTC	3 cut(s)	140, 229, 1039
MmeI	TCCRAC	4 cut(s)	41, 447, 473, 1090
MroI	TCCGGA	2 cut(s)	140, 883
MroXI	GAANNNNTTC	3 cut(s)	97, 296, 1171
MseI	TTAA	3 cut(s)	813, 855, 900
MslI	CAYNNNNRTG	1 cut(s)	784
MspI	CCGG	4 cut(s)	90, 133, 141, 884
MspR9I	CCNGG	3 cut(s)	90, 227, 1209
MvaI	CCWGG	2 cut(s)	227, 1209
MvnI	CGCG	1 cut(s)	1164
MwoI	GCNNNNNNNGC	4 cut(s)	373, 389, 563, 737
NciI	CCSGG	1 cut(s)	90
NdeI	CATATG	2 cut(s)	736, 781
NdeII	GATC	4 cut(s)	435, 706, 880, 892
NlaIII	CATG	5 cut(s)	250, 312, 698, 713, 937
NlaIV	GGNNCC	5 cut(s)	224, 491, 492, 1278, 1306
NmuCI	GTSAC	5 cut(s)	319, 593, 788, 1282, 1294
NsbI	TGCGCA	1 cut(s)	983
PagI	TCATGA	3 cut(s)	246, 709, 933
PdmI	GAANNNNTTC	3 cut(s)	97, 296, 1171
PkrI	GCNGC	2 cut(s)	568, 1269
PleI	GAGTC	3 cut(s)	140, 229, 1039
PpsI	GAGTC	3 cut(s)	140, 229, 1039
PpuMI	RGGWCCY	2 cut(s)	490, 1277
PsiI	TTATAA	1 cut(s)	1227
Psp5II	RGGWCCY	2 cut(s)	490, 1277
Psp6I	CCWGG	2 cut(s)	225, 1207
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	2 cut(s)	225, 1207
PspN4I	GGNNCC	5 cut(s)	224, 491, 492, 1278, 1306
PspPI	GGNCC	4 cut(s)	490, 1205, 1277, 1372
PspPPI	RGGWCCY	2 cut(s)	490, 1277
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PstI	CTGCAG	1 cut(s)	571
PsuI	RGATCY	1 cut(s)	892
RsaI	GTAC	3 cut(s)	260, 305, 680
RsaNI	GTAC	3 cut(s)	259, 304, 679
RseI	CAYNNNNRTG	1 cut(s)	784
SaqAI	TTAA	3 cut(s)	813, 855, 900
SatI	GCNGC	2 cut(s)	567, 1268
Sau3AI	GATC	4 cut(s)	435, 706, 880, 892
Sau96I	GGNCC	4 cut(s)	490, 1205, 1277, 1372
SchI	GAGTC	3 cut(s)	140, 229, 1039
ScrFI	CCNGG	3 cut(s)	90, 227, 1209
SduI	GDGCHC	2 cut(s)	140, 225
SfaNI	GCATC	4 cut(s)	570, 785, 969, 1051
SfcI	CTRYAG	3 cut(s)	567, 654, 720
SinI	GGWCC	2 cut(s)	490, 1277
SmiMI	CAYNNNNRTG	1 cut(s)	784
SmlI	CTYRAG	2 cut(s)	589, 1070
SmoI	CTYRAG	2 cut(s)	589, 1070
SpeI	ACTAGT	1 cut(s)	961
Sse9I	AATT	7 cut(s)	401, 515, 609, 687, 851, 864, 1167
SsiI	CCGC	4 cut(s)	58, 367, 463, 1164
SspMI	CTAG	6 cut(s)	393, 822, 962, 1091, 1382, 1393
StyD4I	CCNGG	3 cut(s)	88, 225, 1207
StyI	CCWWGG	2 cut(s)	165, 629
TaaI	ACNGT	5 cut(s)	98, 325, 454, 655, 757
TaiI	ACGT	4 cut(s)	156, 284, 321, 753
TaqI	TCGA	2 cut(s)	300, 879
TasI	AATT	7 cut(s)	401, 515, 609, 687, 851, 864, 1167
TatI	WGTACW	3 cut(s)	258, 303, 678
Tru1I	TTAA	3 cut(s)	813, 855, 900
Tru9I	TTAA	3 cut(s)	813, 855, 900
TscAI	CASTG	2 cut(s)	271, 576
TseFI	GTSAC	5 cut(s)	319, 593, 788, 1282, 1294
TseI	GCWGC	2 cut(s)	566, 1267
Tsp45I	GTSAC	5 cut(s)	319, 593, 788, 1282, 1294
TspDTI	ATGAA	5 cut(s)	90, 263, 426, 683, 723
TspGWI	ACGGA	1 cut(s)	164
TspRI	CASTG	2 cut(s)	271, 576
VpaK11BI	GGWCC	2 cut(s)	490, 1277
XapI	RAATTY	2 cut(s)	851, 1167
XmnI	GAANNNNTTC	3 cut(s)	97, 296, 1171
XspI	CTAG	6 cut(s)	393, 822, 962, 1091, 1382, 1393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.