Rorug06G0130600

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001524
Physical Location & Seq
Forward (+)
18219209 .. 18221432
2224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0130600.1

Sequence Viewer

Length: 1650 bp
ATGGCCATCCAATTGAGAGCTTCTTCCTCATTATCTTCTGTTCCTTTTTCCACCGGTTCATACACACACGATGTGTTTCTGAGTTTCAGAGGCGAGGATACGCGCTCCGCTTTCACAGGTCATTTGTACTGGAATTTGCTTCAGAAGGGAATCAACACCTTCATAGATGATGAGCTTACAAGAGGAGAGGAAATATCACAAGCACTTCTCCAAGCCATTGAAGGATCAAAGCTCTCCCTCATTATCTTTTCCGAAAACTATGCATCCTCCAAGTGGTGTTTGGAGGAACTGATTCATATCCTTGGATGTAAAAGATCAAAGAACCAAATGGTTCGGCCGATCTTTTACAAAGTGGATCCCTCGGACGTAAGAAACCAACGAGGTAAATTTGGTGAGGCATTTGCACAGCATGAACGCAGGTTCCAAGAGGTGTCAAGATGGAGAGCAGCTCTTTCAGAAGCAGCAAATTTAGCTGGGTGGCATTTCTCGGGCACCGGATATGAATATGAATTTATTGATACAATTGTTGAAGAGATTTCCACACAAGTAAAAGAACCTACCAATTTGGATATGCCAAAGTGCCAAGTTGGGTTAGACTCTCGGGTACAACATATACTTGAAATGTTAGGTGTTGGCAGAAATGATGTACGCGTGGTAGGAATATGGGGAATTGGCGGAATAGGGAAGACGACAATTGCTAAAGCTGTTTGCAATACAATTGCCCATGAGTTTGATGGTAGCTGCTTTTTGGCAAATCAGGATTATCATAACAACAAGAGATATGCGTCTGTTGGCAATGTCCTTATATACAAGGCCAGGGAACTAAATCATAATGAAGGTTGTAAGCTCTTCAGTTCAAATGCCTTCAAGAATAAGAGAAATTTAGATGACAATGAGAAGCTCTTAGTTAGTACTGTTGTTAAATATGCTCAAGGCCTTCCATTAGCCCTGGTAATTTTGGGTTCACATCTATATGGTAGACCTATACGTGAATGGCAAGCTATGTTAGATGGTTATAAAAGAAATCTTCCCAAAGACATTCGAGATATTCTCAAAGTCAGTTACGATGGACTGGAAGAAACAGAGAAAGAAGTTTTCCTCGACATTGCTTGTTTCTTCAAAGGTAAGCATACAATTAATGTGATACAGATACTAGAAGGTAGTGACCGCAACAACCCCAAGCATAGTATTGAAGTTCTTGAAGAAAAGGCGCTCATATATGGTGGTGGATCTGGTCGTATTTGCATGCATGATTTGCTAGAAGAGATGAGAAAAGATATAGATCGGCAAGAGTCTACAGAGCCCGCTCGGCTCGGGGCGCGACGAAGCGGCGGGGGTTGCTGGAAGGACGCCAGGGGTCGGGCAGAGAGGTCTGCAGTCGGTGGAGTCGCCGGCGACGTCGTTGCAGCGCTACCCAGAAAACCTGCAGTTACAGGTCGGGTTGCTGCCCAGAACCTGCAACTCGGACCTCCTCCGACCTCGAACGCTGCCCAGAACCGTCCGAGATGCCTCCGGCCTCCCTCCTGCAAGCCGCGCGCCGCCGTCCGCACTTTAGAGAAGTGCGGACGTCCGCTTTGGAATGGGCCTGTATATCGAAGCTGTTCCAAAAAGGACGTCCGTACTTTCGCTAAAGTGCGGACGCACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE Polysacc_synt_C

Protein Analysis

549

Amino Acids

61.43

Weight (kDa)

9.11

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 23 - 187 1.1e-55 TIR domain
TIR_2 PF13676 25 - 120 1.7e-15 TIR domain
NB-ARC PF00931 201 - 250 6.9e-06 NB-ARC domain
WHD_ROQ1 PF23282 359 - 432 4.4e-11 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1017
AatII GACGTC 3 cut(s) 1401, 1570, 1617
Acc36I ACCTGC 3 cut(s) 408, 1432, 1464
AccB1I GGYRCC 1 cut(s) 491
AccBSI CCGCTC 1 cut(s) 1307
AccI GTMKAC 2 cut(s) 979, 1295
AccII CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
AclWI GGATC 4 cut(s) 232, 350, 363, 1237
AcoI YGGCCR 2 cut(s) 3, 335
AcsI RAATTY 5 cut(s) 133, 386, 466, 509, 880
AcuI CTGAAG 2 cut(s) 125, 835
AcyI GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
AdeI CACNNNGTG 1 cut(s) 73
AfaI GTAC 5 cut(s) 128, 606, 648, 913, 1621
AfeI AGCGCT 1 cut(s) 1410
AfiI CCNNNNNNNGG 2 cut(s) 273, 1359
AflIII ACRYGT 1 cut(s) 649
AgeI ACCGGT 1 cut(s) 53
AgsI TTSAA 8 cut(s) 221, 530, 620, 858, 868, 1120, 1193, 1202
AjnI CCWGG 3 cut(s) 815, 948, 1352
AloI GAACNNNNNNTCC 2 cut(s) 405, 437
AlwI GGATC 4 cut(s) 232, 350, 363, 1237
AlwNI CAGNNNCTG 1 cut(s) 1456
Ama87I CYCGRG 3 cut(s) 487, 600, 1313
Aor51HI AGCGCT 1 cut(s) 1410
AoxI GGCC 6 cut(s) 3, 335, 813, 934, 1514, 1583
ApeKI GCWGC 6 cut(s) 446, 461, 741, 1406, 1445, 1487
ApoI RAATTY 5 cut(s) 133, 386, 466, 509, 880
ArsI GACNNNNNNTTYG 4 cut(s) 1557, 1589, 1599, 1631
AseI ATTAAT 1 cut(s) 1137
AsiGI ACCGGT 1 cut(s) 53
Asp700I GAANNNNTTC 2 cut(s) 291, 1600
AspLEI GCGC 6 cut(s) 105, 1213, 1321, 1411, 1536, 1538
AspS9I GGNCC 2 cut(s) 1466, 1583
AsuHPI GGTGA 1 cut(s) 404
AvaI CYCGRG 3 cut(s) 487, 600, 1313
AvaII GGWCC 1 cut(s) 1466
BaeGI GKGCMC 1 cut(s) 494
BaeI ACNNNNGTAYC 2 cut(s) 510, 543
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 491
BanII GRGCYC 1 cut(s) 1305
BbsI GAAGAC 1 cut(s) 692
BbvI GCAGC 6 cut(s) 458, 473, 728, 1418, 1432, 1474
BccI CCATC 5 cut(s) 14, 432, 728, 1004, 1061
BceAI ACGGC 1 cut(s) 1526
BcgI CGANNNNNNTGC 4 cut(s) 242, 276, 1385, 1419
BciT130I CCWGG 3 cut(s) 817, 950, 1354
BciVI GTATCC 1 cut(s) 91
BfaI CTAG 2 cut(s) 1154, 1259
BfmI CTRYAG 3 cut(s) 1296, 1374, 1425
BfoI RGCGCY 2 cut(s) 1214, 1412
BfuAI ACCTGC 3 cut(s) 408, 1432, 1464
BfuI GTATCC 1 cut(s) 91
BglI GCCNNNNNGGC 1 cut(s) 1309
BisI GCNGC 9 cut(s) 447, 462, 742, 1330, 1407, 1446, 1488, 1532, 1539
BlsI GCNGC 9 cut(s) 448, 463, 743, 1331, 1408, 1447, 1489, 1533, 1540
BmcAI AGTACT 1 cut(s) 913
Bme1390I CCNGG 3 cut(s) 817, 950, 1354
Bme18I GGWCC 1 cut(s) 1466
BmeT110I CYCGRG 3 cut(s) 487, 600, 1313
BmgT120I GGNCC 2 cut(s) 1466, 1583
BmiI GGNNCC 3 cut(s) 357, 422, 493
BmrFI CCNGG 3 cut(s) 817, 950, 1354
BmsI GCATC 2 cut(s) 272, 1496
BpiI GAAGAC 1 cut(s) 692
BplI GAGNNNNNCTC 4 cut(s) 433, 465, 1035, 1067
BpuEI CTTGAG 1 cut(s) 915
BsaAI YACGTR 1 cut(s) 989
BsaBI GATNNNNATC 2 cut(s) 296, 1281
BsaHI GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
BsaJI CCNNGG 5 cut(s) 301, 360, 816, 948, 1353
BsaWI WCCGGW 2 cut(s) 53, 494
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 1359
Bse118I RCCGGY 2 cut(s) 53, 1391
Bse1I ACTGG 2 cut(s) 134, 1077
Bse3DI GCAATG 2 cut(s) 802, 1104
Bse8I GATNNNNATC 2 cut(s) 296, 1281
BseBI CCWGG 3 cut(s) 817, 950, 1354
BseDI CCNNGG 5 cut(s) 301, 360, 816, 948, 1353
BseGI GGATG 3 cut(s) 6, 263, 311
BseJI GATNNNNATC 2 cut(s) 296, 1281
BseLI CCNNNNNNNGG 2 cut(s) 273, 1359
BseMI GCAATG 2 cut(s) 802, 1104
BseMII CTCAG 1 cut(s) 71
BseNI ACTGG 2 cut(s) 134, 1077
BsePI GCGCGC 1 cut(s) 1534
BseRI GAGGAG 2 cut(s) 198, 1461
BseSI GKGCMC 1 cut(s) 494
BseX3I CGGCCG 1 cut(s) 335
BseXI GCAGC 6 cut(s) 458, 473, 728, 1418, 1432, 1474
BseYI CCCAGC 1 cut(s) 473
Bsh1236I CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
Bsh1285I CGRYCG 1 cut(s) 338
BshFI GGCC 6 cut(s) 5, 337, 815, 936, 1516, 1585
BshNI GGYRCC 1 cut(s) 491
BshTI ACCGGT 1 cut(s) 53
BsiEI CGRYCG 1 cut(s) 338
BsiHKCI CYCGRG 3 cut(s) 487, 600, 1313
BsiSI CCGG 4 cut(s) 54, 495, 1392, 1513
BslI CCNNNNNNNGG 2 cut(s) 273, 1359
BsnI GGCC 6 cut(s) 5, 337, 815, 936, 1516, 1585
BsoBI CYCGRG 3 cut(s) 487, 600, 1313
Bsp1286I GDGCHC 2 cut(s) 494, 1305
Bsp143I GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
BspANI GGCC 6 cut(s) 5, 337, 815, 936, 1516, 1585
BspCNI CTCAG 1 cut(s) 72
BspFNI CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
BspLI GGNNCC 3 cut(s) 357, 422, 493
BspMAI CTGCAG 2 cut(s) 1378, 1429
BspMI ACCTGC 3 cut(s) 408, 1432, 1464
BspPI GGATC 4 cut(s) 232, 350, 363, 1237
BspQI GCTCTTC 1 cut(s) 854
BspT107I GGYRCC 1 cut(s) 491
BsrBI CCGCTC 1 cut(s) 1307
BsrDI GCAATG 2 cut(s) 802, 1104
BsrFI RCCGGY 2 cut(s) 53, 1391
BsrI ACTGG 2 cut(s) 134, 1077
BssAI RCCGGY 2 cut(s) 53, 1391
BssECI CCNNGG 5 cut(s) 301, 360, 816, 948, 1353
BssHII GCGCGC 1 cut(s) 1534
BssMI GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
BssNI GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
BssT1I CCWWGG 1 cut(s) 301
Bst2UI CCWGG 3 cut(s) 817, 950, 1354
Bst4CI ACNGT 2 cut(s) 916, 1499
Bst6I CTCTTC 3 cut(s) 525, 854, 1257
BstACI GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
BstAPI GCANNNNNTGC 1 cut(s) 1255
BstBAI YACGTR 1 cut(s) 989
BstC8I GCNNGC 6 cut(s) 999, 1247, 1305, 1393, 1529, 1536
BstDEI CTNAG 2 cut(s) 80, 904
BstF5I GGATG 3 cut(s) 6, 263, 311
BstFNI CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
BstH2I RGCGCY 2 cut(s) 1214, 1412
BstHHI GCGC 6 cut(s) 105, 1213, 1321, 1411, 1536, 1538
BstKTI GATC 6 cut(s) 227, 317, 342, 358, 1232, 1285
BstMBI GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
BstMCI CGRYCG 1 cut(s) 338
BstMWI GCNNNNNNNGC 6 cut(s) 470, 1255, 1309, 1318, 1338, 1533
BstNI CCWGG 3 cut(s) 817, 950, 1354
BstNSI RCATGY 1 cut(s) 1249
BstSCI CCNGG 3 cut(s) 815, 948, 1352
BstSFI CTRYAG 3 cut(s) 1296, 1374, 1425
BstSLI GKGCMC 1 cut(s) 494
BstUI CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
BstV1I GCAGC 6 cut(s) 458, 473, 728, 1418, 1432, 1474
BstV2I GAAGAC 1 cut(s) 692
BstX2I RGATCY 2 cut(s) 355, 1229
BstYI RGATCY 2 cut(s) 355, 1229
BstZI CGGCCG 1 cut(s) 335
BsuI GTATCC 1 cut(s) 91
BsuRI GGCC 6 cut(s) 5, 337, 815, 936, 1516, 1585
BtsCI GGATG 3 cut(s) 6, 263, 311
BveI ACCTGC 3 cut(s) 408, 1432, 1464
Cac8I GCNNGC 6 cut(s) 999, 1247, 1305, 1393, 1529, 1536
CaiI CAGNNNCTG 1 cut(s) 1456
CfoI GCGC 6 cut(s) 105, 1213, 1321, 1411, 1536, 1538
Cfr10I RCCGGY 2 cut(s) 53, 1391
Cfr13I GGNCC 2 cut(s) 1466, 1583
CseI GACGC 2 cut(s) 774, 1358
Csp6I GTAC 5 cut(s) 127, 605, 647, 912, 1620
CspAI ACCGGT 1 cut(s) 53
CviAII CATG 4 cut(s) 410, 725, 1246, 1250
CviQI GTAC 5 cut(s) 127, 605, 647, 912, 1620
DdeI CTNAG 2 cut(s) 80, 904
DpnI GATC 6 cut(s) 226, 316, 341, 357, 1231, 1284
DpnII GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
DraIII CACNNNGTG 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 3, 335
EagI CGGCCG 1 cut(s) 335
Eam1104I CTCTTC 3 cut(s) 525, 854, 1257
EarI CTCTTC 3 cut(s) 525, 854, 1257
EciI GGCGGA 1 cut(s) 690
EclXI CGGCCG 1 cut(s) 335
Eco130I CCWWGG 1 cut(s) 301
Eco147I AGGCCT 1 cut(s) 936
Eco24I GRGCYC 1 cut(s) 1305
Eco47I GGWCC 1 cut(s) 1466
Eco47III AGCGCT 1 cut(s) 1410
Eco52I CGGCCG 1 cut(s) 335
Eco57I CTGAAG 2 cut(s) 125, 835
Eco88I CYCGRG 3 cut(s) 487, 600, 1313
EcoRII CCWGG 3 cut(s) 815, 948, 1352
EcoT14I CCWWGG 1 cut(s) 301
EcoT22I ATGCAT 2 cut(s) 265, 1251
EcoT38I GRGCYC 1 cut(s) 1305
ErhI CCWWGG 1 cut(s) 301
FaeI CATG 4 cut(s) 413, 728, 1249, 1253
FatI CATG 4 cut(s) 409, 724, 1245, 1249
FauI CCCGC 2 cut(s) 1312, 1325
FblI GTMKAC 2 cut(s) 979, 1295
Fnu4HI GCNGC 9 cut(s) 447, 462, 742, 1330, 1407, 1446, 1488, 1532, 1539
FokI GGATG 2 cut(s) 250, 318
FriOI GRGCYC 1 cut(s) 1305
Fsp4HI GCNGC 9 cut(s) 447, 462, 742, 1330, 1407, 1446, 1488, 1532, 1539
FspBI CTAG 2 cut(s) 1154, 1259
GlaI GCGC 6 cut(s) 104, 1212, 1320, 1410, 1535, 1537
GluI GCNGC 9 cut(s) 447, 462, 742, 1330, 1407, 1446, 1488, 1532, 1539
GsaI CCCAGC 1 cut(s) 477
HaeII RGCGCY 2 cut(s) 1214, 1412
HaeIII GGCC 6 cut(s) 5, 337, 815, 936, 1516, 1585
HapII CCGG 4 cut(s) 54, 495, 1392, 1513
HgaI GACGC 2 cut(s) 774, 1358
HhaI GCGC 6 cut(s) 105, 1213, 1321, 1411, 1536, 1538
Hin1I GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
Hin1II CATG 4 cut(s) 413, 728, 1249, 1253
Hin6I GCGC 6 cut(s) 103, 1211, 1319, 1409, 1534, 1536
HinP1I GCGC 6 cut(s) 103, 1211, 1319, 1409, 1534, 1536
HinfI GANTC 5 cut(s) 150, 292, 596, 1292, 1386
HpaII CCGG 4 cut(s) 54, 495, 1392, 1513
HphI GGTGA 1 cut(s) 404
Hpy166II GTNNAC 3 cut(s) 965, 980, 1296
Hpy188I TCNGA 9 cut(s) 81, 89, 144, 253, 364, 457, 1466, 1476, 1503
Hpy188III TCNNGA 5 cut(s) 435, 758, 868, 1043, 1199
Hpy8I GTNNAC 3 cut(s) 965, 980, 1296
Hpy99I CGWCG 3 cut(s) 1326, 1400, 1403
HpyAV CCTTC 8 cut(s) 139, 169, 215, 830, 874, 947, 1151, 1339
HpyCH4III ACNGT 2 cut(s) 916, 1499
HpyCH4IV ACGT 5 cut(s) 366, 988, 1398, 1567, 1614
HpyF10VI GCNNNNNNNGC 6 cut(s) 470, 1255, 1309, 1318, 1338, 1533
HpyF3I CTNAG 2 cut(s) 80, 904
HpySE526I ACGT 5 cut(s) 366, 988, 1398, 1567, 1614
Hsp92I GRCGYC 4 cut(s) 1350, 1398, 1567, 1614
Hsp92II CATG 4 cut(s) 413, 728, 1249, 1253
HspAI GCGC 6 cut(s) 103, 1211, 1319, 1409, 1534, 1536
KroI GCCGGC 1 cut(s) 1391
KroNI GCCGGC 1 cut(s) 1393
Kzo9I GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
LguI GCTCTTC 1 cut(s) 854
LmnI GCTCC 1 cut(s) 110
Lsp1109I GCAGC 6 cut(s) 458, 473, 728, 1418, 1432, 1474
LweI GCATC 2 cut(s) 272, 1496
MaeI CTAG 2 cut(s) 1154, 1259
MaeII ACGT 5 cut(s) 366, 988, 1398, 1567, 1614
MaeIII GTNAC 3 cut(s) 1061, 1163, 1429
MalI GATC 6 cut(s) 226, 316, 341, 357, 1231, 1284
MbiI CCGCTC 1 cut(s) 1307
MboI GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
MfeI CAATTG 4 cut(s) 11, 522, 693, 717
MflI RGATCY 2 cut(s) 355, 1229
MhlI GDGCHC 2 cut(s) 494, 1305
MlsI TGGCCA 1 cut(s) 5
MluI ACGCGT 1 cut(s) 649
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 590, 1301, 1395
MmeI TCCRAC 1 cut(s) 1499
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 265, 1251
MreI CGCCGGCG 1 cut(s) 1391
MroNI GCCGGC 1 cut(s) 1391
MroXI GAANNNNTTC 2 cut(s) 291, 1600
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 921, 1137
MslI CAYNNNNRTG 1 cut(s) 972
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 4 cut(s) 54, 495, 1392, 1513
MspR9I CCNGG 3 cut(s) 817, 950, 1354
MunI CAATTG 4 cut(s) 11, 522, 693, 717
MvaI CCWGG 3 cut(s) 817, 950, 1354
MvnI CGCG 5 cut(s) 103, 651, 1321, 1534, 1536
MwoI GCNNNNNNNGC 6 cut(s) 470, 1255, 1309, 1318, 1338, 1533
NaeI GCCGGC 1 cut(s) 1393
NdeII GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
NgoMIV GCCGGC 1 cut(s) 1391
NlaIII CATG 4 cut(s) 413, 728, 1249, 1253
NlaIV GGNNCC 3 cut(s) 357, 422, 493
NmeAIII GCCGAG 1 cut(s) 1288
NmuCI GTSAC 1 cut(s) 1163
NsiI ATGCAT 2 cut(s) 265, 1251
NspI RCATGY 1 cut(s) 1249
PaeI GCATGC 1 cut(s) 1249
PauI GCGCGC 1 cut(s) 1534
PceI AGGCCT 1 cut(s) 936
PciSI GCTCTTC 1 cut(s) 854
PcsI WCGNNNNNNNCGW 1 cut(s) 1395
PdiI GCCGGC 1 cut(s) 1393
PdmI GAANNNNTTC 2 cut(s) 291, 1600
PfeI GAWTC 2 cut(s) 150, 292
PinAI ACCGGT 1 cut(s) 53
PkrI GCNGC 9 cut(s) 448, 463, 743, 1331, 1408, 1447, 1489, 1533, 1540
PleI GAGTC 3 cut(s) 590, 1300, 1394
PpsI GAGTC 3 cut(s) 590, 1300, 1394
Ppu21I YACGTR 1 cut(s) 989
PshBI ATTAAT 1 cut(s) 1137
PsiI TTATAA 1 cut(s) 1017
Psp6I CCWGG 3 cut(s) 815, 948, 1352
PspFI CCCAGC 1 cut(s) 473
PspGI CCWGG 3 cut(s) 815, 948, 1352
PspN4I GGNNCC 3 cut(s) 357, 422, 493
PspPI GGNCC 2 cut(s) 1466, 1583
PstI CTGCAG 2 cut(s) 1378, 1429
PstNI CAGNNNCTG 1 cut(s) 1456
PsuI RGATCY 2 cut(s) 355, 1229
PteI GCGCGC 1 cut(s) 1534
RsaI GTAC 5 cut(s) 128, 606, 648, 913, 1621
RsaNI GTAC 5 cut(s) 127, 605, 647, 912, 1620
RseI CAYNNNNRTG 1 cut(s) 972
SapI GCTCTTC 1 cut(s) 854
SaqAI TTAA 2 cut(s) 921, 1137
SatI GCNGC 9 cut(s) 447, 462, 742, 1330, 1407, 1446, 1488, 1532, 1539
Sau3AI GATC 6 cut(s) 224, 314, 339, 355, 1229, 1282
Sau96I GGNCC 2 cut(s) 1466, 1583
ScaI AGTACT 1 cut(s) 913
SchI GAGTC 3 cut(s) 590, 1301, 1395
ScrFI CCNGG 3 cut(s) 817, 950, 1354
SduI GDGCHC 2 cut(s) 494, 1305
SfaNI GCATC 2 cut(s) 272, 1496
SfcI CTRYAG 3 cut(s) 1296, 1374, 1425
SgrAI CRCCGGYG 1 cut(s) 1391
SinI GGWCC 1 cut(s) 1466
SmiMI CAYNNNNRTG 1 cut(s) 972
SmlI CTYRAG 1 cut(s) 930
SmoI CTYRAG 1 cut(s) 930
SphI GCATGC 1 cut(s) 1249
SseBI AGGCCT 1 cut(s) 936
SspMI CTAG 2 cut(s) 1154, 1259
StuI AGGCCT 1 cut(s) 936
StyD4I CCNGG 3 cut(s) 815, 948, 1352
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 2 cut(s) 916, 1499
TaiI ACGT 5 cut(s) 369, 991, 1401, 1570, 1617
TaqI TCGA 4 cut(s) 1042, 1101, 1481, 1594
TatI WGTACW 2 cut(s) 126, 911
TauI GCSGC 3 cut(s) 1332, 1534, 1541
TfiI GAWTC 2 cut(s) 150, 292
Tru1I TTAA 2 cut(s) 921, 1137
Tru9I TTAA 2 cut(s) 921, 1137
TseFI GTSAC 1 cut(s) 1163
TseI GCWGC 6 cut(s) 446, 461, 741, 1406, 1445, 1487
Tsp45I GTSAC 1 cut(s) 1163
TspDTI ATGAA 7 cut(s) 48, 151, 284, 426, 516, 522, 849
TspGWI ACGGA 1 cut(s) 1607
VpaK11BI GGWCC 1 cut(s) 1466
VspI ATTAAT 1 cut(s) 1137
XapI RAATTY 5 cut(s) 133, 386, 466, 509, 880
XceI RCATGY 1 cut(s) 1249
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 731
XmiI GTMKAC 2 cut(s) 979, 1295
XmnI GAANNNNTTC 2 cut(s) 291, 1600
XspI CTAG 2 cut(s) 1154, 1259
ZraI GACGTC 3 cut(s) 1399, 1568, 1615
ZrmI AGTACT 1 cut(s) 913
Zsp2I ATGCAT 2 cut(s) 265, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.