auxin-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02980 |
| fragaria_vesca | FvH4_2g24150 FvH4_2g24150 FvH4_2g24150 |
| malus_domestica | MD03G1271500.v1.1 MD11G1292100.v1.1 |
| prunus_persica | Prupe.8G247700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0291961 |
| rosa_laevigata | RLG00000012075 |
| rosa_multiflora | Rmu_co8386397.1_g000001 Rmu_sc0026994.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00175550 Rroxscaffold_7G00177990 |
| rosa_rugosa | Rorug06G0222000 Rorug06G0222100 Rorug06G0222200 |
| rosa_samantha | Rh6AG335800 Rh6BG343200 Rh6CG349400 Rh6DG336200 |
| rosa_wichuraiana | Rw6G029230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 470 |
| AccII | CGCG | 1 cut(s) | 96 |
| AciI | CCGC | 5 cut(s) | 74, 96, 103, 403, 1133 |
| AclWI | GGATC | 5 cut(s) | 455, 468, 623, 881, 1029 |
| AcsI | RAATTY | 1 cut(s) | 444 |
| AcuI | CTGAAG | 1 cut(s) | 290 |
| AdeI | CACNNNGTG | 1 cut(s) | 470 |
| AfaI | GTAC | 1 cut(s) | 197 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 470 |
| AgsI | TTSAA | 6 cut(s) | 494, 624, 815, 1030, 1057, 1141 |
| AhlI | ACTAGT | 1 cut(s) | 851 |
| AjnI | CCWGG | 2 cut(s) | 585, 670 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 862, 894 |
| AluBI | AGCT | 6 cut(s) | 245, 304, 508, 595, 646, 1106 |
| AluI | AGCT | 6 cut(s) | 245, 304, 508, 595, 646, 1106 |
| Alw26I | GTCTC | 5 cut(s) | 21, 89, 389, 540, 580 |
| AlwI | GGATC | 5 cut(s) | 455, 468, 623, 881, 1029 |
| AoxI | GGCC | 2 cut(s) | 486, 948 |
| ApeKI | GCWGC | 6 cut(s) | 37, 40, 245, 508, 978, 1103 |
| ApoI | RAATTY | 1 cut(s) | 444 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 220, 252 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 498 |
| AspLEI | GCGC | 2 cut(s) | 96, 147 |
| AspS9I | GGNCC | 3 cut(s) | 133, 487, 667 |
| AsuHPI | GGTGA | 2 cut(s) | 767, 1013 |
| AsuII | TTCGAA | 1 cut(s) | 108 |
| AvaII | GGWCC | 2 cut(s) | 133, 667 |
| BamHI | GGATCC | 1 cut(s) | 460 |
| BauI | CACGAG | 1 cut(s) | 139 |
| BbvI | GCAGC | 6 cut(s) | 49, 52, 232, 495, 990, 1115 |
| BccI | CCATC | 1 cut(s) | 640 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 88, 122 |
| BciT130I | CCWGG | 2 cut(s) | 587, 672 |
| BclI | TGATCA | 2 cut(s) | 262, 769 |
| BcoDI | GTCTC | 5 cut(s) | 21, 89, 389, 540, 580 |
| BcuI | ACTAGT | 1 cut(s) | 851 |
| BfaI | CTAG | 1 cut(s) | 852 |
| BfoI | RGCGCY | 1 cut(s) | 148 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 49 |
| BglII | AGATCT | 1 cut(s) | 285 |
| BisI | GCNGC | 8 cut(s) | 38, 41, 97, 246, 403, 509, 979, 1104 |
| BlsI | GCNGC | 8 cut(s) | 39, 42, 98, 247, 404, 510, 980, 1105 |
| Bme1390I | CCNGG | 2 cut(s) | 587, 672 |
| Bme18I | GGWCC | 2 cut(s) | 133, 667 |
| BmgT120I | GGNCC | 3 cut(s) | 133, 487, 667 |
| BmiI | GGNNCC | 3 cut(s) | 462, 561, 669 |
| BmrFI | CCNGG | 2 cut(s) | 587, 672 |
| BmrI | ACTGGG | 1 cut(s) | 945 |
| BmsI | GCATC | 3 cut(s) | 363, 426, 936 |
| BmuI | ACTGGG | 1 cut(s) | 945 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 316, 348 |
| BpmI | CTGGAG | 1 cut(s) | 608 |
| Bpu14I | TTCGAA | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 1 cut(s) | 71 |
| BsaI | GGTCTC | 2 cut(s) | 21, 540 |
| BsaJI | CCNNGG | 2 cut(s) | 231, 670 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 470 |
| Bse1I | ACTGG | 4 cut(s) | 342, 669, 890, 940 |
| Bse3DI | GCAATG | 1 cut(s) | 994 |
| BseBI | CCWGG | 2 cut(s) | 587, 672 |
| BseDI | CCNNGG | 2 cut(s) | 231, 670 |
| BseGI | GGATG | 3 cut(s) | 175, 265, 1126 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 470 |
| BseMI | GCAATG | 1 cut(s) | 994 |
| BseMII | CTCAG | 3 cut(s) | 347, 591, 893 |
| BseNI | ACTGG | 4 cut(s) | 342, 669, 890, 940 |
| BseRI | GAGGAG | 1 cut(s) | 1071 |
| BseXI | GCAGC | 6 cut(s) | 49, 52, 232, 495, 990, 1115 |
| BseYI | CCCAGC | 1 cut(s) | 314 |
| BsgI | GTGCAG | 2 cut(s) | 56, 1122 |
| Bsh1236I | CGCG | 1 cut(s) | 96 |
| BshFI | GGCC | 2 cut(s) | 488, 950 |
| BsiSI | CCGG | 1 cut(s) | 150 |
| BslFI | GGGAC | 1 cut(s) | 698 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 470 |
| BsmAI | GTCTC | 5 cut(s) | 21, 89, 389, 540, 580 |
| BsmBI | CGTCTC | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 698 |
| BsmI | GAATGC | 1 cut(s) | 613 |
| BsnI | GGCC | 2 cut(s) | 488, 950 |
| Bso31I | GGTCTC | 2 cut(s) | 21, 540 |
| Bsp119I | TTCGAA | 1 cut(s) | 108 |
| Bsp143I | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| BspACI | CCGC | 5 cut(s) | 74, 96, 103, 403, 1133 |
| BspANI | GGCC | 2 cut(s) | 488, 950 |
| BspCNI | CTCAG | 3 cut(s) | 346, 590, 894 |
| BspFNI | CGCG | 1 cut(s) | 96 |
| BspHI | TCATGA | 1 cut(s) | 502 |
| BspLI | GGNNCC | 3 cut(s) | 462, 561, 669 |
| BspPI | GGATC | 5 cut(s) | 455, 468, 623, 881, 1029 |
| BspT104I | TTCGAA | 1 cut(s) | 108 |
| BspTNI | GGTCTC | 2 cut(s) | 21, 540 |
| BsrDI | GCAATG | 1 cut(s) | 994 |
| BsrI | ACTGG | 4 cut(s) | 342, 669, 890, 940 |
| BssECI | CCNNGG | 2 cut(s) | 231, 670 |
| BssMI | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| BssSI | CACGAG | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 231 |
| Bst2BI | CACGAG | 1 cut(s) | 139 |
| Bst2UI | CCWGG | 2 cut(s) | 587, 672 |
| Bst4CI | ACNGT | 6 cut(s) | 193, 470, 534, 559, 689, 763 |
| Bst6I | CTCTTC | 1 cut(s) | 50 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 984 |
| BstBI | TTCGAA | 1 cut(s) | 108 |
| BstC8I | GCNNGC | 3 cut(s) | 118, 486, 747 |
| BstDEI | CTNAG | 4 cut(s) | 333, 577, 902, 1128 |
| BstF5I | GGATG | 3 cut(s) | 175, 265, 1126 |
| BstFNI | CGCG | 1 cut(s) | 96 |
| BstH2I | RGCGCY | 1 cut(s) | 148 |
| BstHHI | GCGC | 2 cut(s) | 96, 147 |
| BstKTI | GATC | 8 cut(s) | 265, 288, 463, 528, 631, 772, 889, 1024 |
| BstMAI | GTCTC | 5 cut(s) | 21, 89, 389, 540, 580 |
| BstMBI | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 49, 58, 102, 514, 978, 984 |
| BstNI | CCWGG | 2 cut(s) | 587, 672 |
| BstNSI | RCATGY | 1 cut(s) | 749 |
| BstSCI | CCNGG | 2 cut(s) | 585, 670 |
| BstUI | CGCG | 1 cut(s) | 96 |
| BstV1I | GCAGC | 6 cut(s) | 49, 52, 232, 495, 990, 1115 |
| BstX2I | RGATCY | 3 cut(s) | 285, 460, 628 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 238 |
| BstYI | RGATCY | 3 cut(s) | 285, 460, 628 |
| BsuRI | GGCC | 2 cut(s) | 488, 950 |
| BtsCI | GGATG | 3 cut(s) | 175, 265, 1126 |
| BtsI | GCAGTG | 1 cut(s) | 707 |
| BtsIMutI | CAGTG | 2 cut(s) | 475, 707 |
| Cac8I | GCNNGC | 3 cut(s) | 118, 486, 747 |
| CciI | TCATGA | 1 cut(s) | 502 |
| CfoI | GCGC | 2 cut(s) | 96, 147 |
| Cfr13I | GGNCC | 3 cut(s) | 133, 487, 667 |
| CseI | GACGC | 1 cut(s) | 71 |
| Csp6I | GTAC | 1 cut(s) | 196 |
| CviAII | CATG | 5 cut(s) | 503, 541, 713, 746, 1117 |
| CviQI | GTAC | 1 cut(s) | 196 |
| DdeI | CTNAG | 4 cut(s) | 333, 577, 902, 1128 |
| DpnI | GATC | 8 cut(s) | 264, 287, 462, 527, 630, 771, 888, 1023 |
| DpnII | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| DraIII | CACNNNGTG | 1 cut(s) | 470 |
| Eam1104I | CTCTTC | 1 cut(s) | 50 |
| EarI | CTCTTC | 1 cut(s) | 50 |
| EciI | GGCGGA | 1 cut(s) | 1148 |
| Eco130I | CCWWGG | 1 cut(s) | 231 |
| Eco31I | GGTCTC | 2 cut(s) | 21, 540 |
| Eco32I | GATATC | 1 cut(s) | 358 |
| Eco47I | GGWCC | 2 cut(s) | 133, 667 |
| Eco57I | CTGAAG | 1 cut(s) | 290 |
| EcoO109I | RGGNCCY | 2 cut(s) | 133, 487 |
| EcoRII | CCWGG | 2 cut(s) | 585, 670 |
| EcoRV | GATATC | 1 cut(s) | 358 |
| EcoT14I | CCWWGG | 1 cut(s) | 231 |
| EcoT22I | ATGCAT | 1 cut(s) | 994 |
| ErhI | CCWWGG | 1 cut(s) | 231 |
| Esp3I | CGTCTC | 1 cut(s) | 89 |
| FaeI | CATG | 5 cut(s) | 506, 544, 716, 749, 1120 |
| FaiI | YATR | 9 cut(s) | 387, 504, 542, 714, 723, 747, 786, 1050, 1118 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 204, 236, 288, 320 |
| FaqI | GGGAC | 1 cut(s) | 698 |
| FatI | CATG | 5 cut(s) | 502, 540, 712, 745, 1116 |
| FbaI | TGATCA | 2 cut(s) | 262, 769 |
| Fnu4HI | GCNGC | 8 cut(s) | 38, 41, 97, 246, 403, 509, 979, 1104 |
| FokI | GGATG | 3 cut(s) | 182, 272, 1133 |
| Fsp4HI | GCNGC | 8 cut(s) | 38, 41, 97, 246, 403, 509, 979, 1104 |
| FspBI | CTAG | 1 cut(s) | 852 |
| GlaI | GCGC | 2 cut(s) | 95, 146 |
| GluI | GCNGC | 8 cut(s) | 38, 41, 97, 246, 403, 509, 979, 1104 |
| GsaI | CCCAGC | 1 cut(s) | 318 |
| GsuI | CTGGAG | 1 cut(s) | 608 |
| HaeII | RGCGCY | 1 cut(s) | 148 |
| HaeIII | GGCC | 2 cut(s) | 488, 950 |
| HapII | CCGG | 1 cut(s) | 150 |
| HgaI | GACGC | 1 cut(s) | 71 |
| HhaI | GCGC | 2 cut(s) | 96, 147 |
| Hin1II | CATG | 5 cut(s) | 506, 544, 716, 749, 1120 |
| Hin6I | GCGC | 2 cut(s) | 94, 145 |
| HinP1I | GCGC | 2 cut(s) | 94, 145 |
| HindIII | AAGCTT | 1 cut(s) | 593 |
| HinfI | GANTC | 9 cut(s) | 329, 397, 552, 815, 824, 830, 878, 1004, 1124 |
| HpaII | CCGG | 1 cut(s) | 150 |
| HphI | GGTGA | 2 cut(s) | 767, 1013 |
| Hpy166II | GTNNAC | 2 cut(s) | 196, 662 |
| Hpy188I | TCNGA | 6 cut(s) | 259, 267, 829, 862, 886, 1157 |
| Hpy188III | TCNNGA | 9 cut(s) | 88, 353, 392, 503, 523, 563, 636, 683, 1030 |
| Hpy8I | GTNNAC | 2 cut(s) | 196, 662 |
| HpyAV | CCTTC | 7 cut(s) | 25, 313, 867, 868, 940, 953, 1135 |
| HpyCH4III | ACNGT | 6 cut(s) | 193, 470, 534, 559, 689, 763 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 49, 58, 102, 514, 978, 984 |
| HpyF3I | CTNAG | 4 cut(s) | 333, 577, 902, 1128 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| Hsp92II | CATG | 5 cut(s) | 506, 544, 716, 749, 1120 |
| HspAI | GCGC | 2 cut(s) | 94, 145 |
| Ksp22I | TGATCA | 2 cut(s) | 262, 769 |
| Kzo9I | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| LmnI | GCTCC | 2 cut(s) | 152, 301 |
| Lsp1109I | GCAGC | 6 cut(s) | 49, 52, 232, 495, 990, 1115 |
| LweI | GCATC | 3 cut(s) | 363, 426, 936 |
| MaeI | CTAG | 1 cut(s) | 852 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 1 cut(s) | 755 |
| MalI | GATC | 8 cut(s) | 264, 287, 462, 527, 630, 771, 888, 1023 |
| MboI | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| MboII | GAAGA | 4 cut(s) | 67, 791, 853, 1103 |
| MflI | RGATCY | 3 cut(s) | 285, 460, 628 |
| MluCI | AATT | 3 cut(s) | 111, 444, 1051 |
| MlyI | GAGTC | 3 cut(s) | 391, 546, 1118 |
| MmeI | TCCRAC | 1 cut(s) | 237 |
| Mph1103I | ATGCAT | 1 cut(s) | 994 |
| MroXI | GAANNNNTTC | 1 cut(s) | 498 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1115 |
| MspA1I | CMGCKG | 1 cut(s) | 1106 |
| MspI | CCGG | 1 cut(s) | 150 |
| MspR9I | CCNGG | 2 cut(s) | 587, 672 |
| Mva1269I | GAATGC | 1 cut(s) | 613 |
| MvaI | CCWGG | 2 cut(s) | 587, 672 |
| MvnI | CGCG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 49, 58, 102, 514, 978, 984 |
| NdeII | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| NlaIII | CATG | 5 cut(s) | 506, 544, 716, 749, 1120 |
| NlaIV | GGNNCC | 3 cut(s) | 462, 561, 669 |
| NmuCI | GTSAC | 1 cut(s) | 755 |
| NsiI | ATGCAT | 1 cut(s) | 994 |
| NspI | RCATGY | 1 cut(s) | 749 |
| NspV | TTCGAA | 1 cut(s) | 108 |
| PaeI | GCATGC | 1 cut(s) | 749 |
| PagI | TCATGA | 1 cut(s) | 502 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 197 |
| PctI | GAATGC | 1 cut(s) | 613 |
| PdmI | GAANNNNTTC | 1 cut(s) | 498 |
| PfeI | GAWTC | 6 cut(s) | 329, 815, 824, 830, 878, 1004 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 470 |
| PfoI | TCCNGGA | 1 cut(s) | 585 |
| PkrI | GCNGC | 8 cut(s) | 39, 42, 98, 247, 404, 510, 980, 1105 |
| PleI | GAGTC | 3 cut(s) | 391, 546, 1118 |
| PpsI | GAGTC | 3 cut(s) | 391, 546, 1118 |
| PpuMI | RGGWCCY | 1 cut(s) | 133 |
| Psp5II | RGGWCCY | 1 cut(s) | 133 |
| Psp6I | CCWGG | 2 cut(s) | 585, 670 |
| PspFI | CCCAGC | 1 cut(s) | 314 |
| PspGI | CCWGG | 2 cut(s) | 585, 670 |
| PspN4I | GGNNCC | 3 cut(s) | 462, 561, 669 |
| PspPI | GGNCC | 3 cut(s) | 133, 487, 667 |
| PspPPI | RGGWCCY | 1 cut(s) | 133 |
| PsuI | RGATCY | 3 cut(s) | 285, 460, 628 |
| PvuII | CAGCTG | 1 cut(s) | 1106 |
| RsaI | GTAC | 1 cut(s) | 197 |
| RsaNI | GTAC | 1 cut(s) | 196 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SatI | GCNGC | 8 cut(s) | 38, 41, 97, 246, 403, 509, 979, 1104 |
| Sau3AI | GATC | 8 cut(s) | 262, 285, 460, 525, 628, 769, 886, 1021 |
| Sau96I | GGNCC | 3 cut(s) | 133, 487, 667 |
| SchI | GAGTC | 3 cut(s) | 391, 546, 1118 |
| ScrFI | CCNGG | 2 cut(s) | 587, 672 |
| SfaNI | GCATC | 3 cut(s) | 363, 426, 936 |
| SfuI | TTCGAA | 1 cut(s) | 108 |
| SinI | GGWCC | 2 cut(s) | 133, 667 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| SpeI | ACTAGT | 1 cut(s) | 851 |
| SphI | GCATGC | 1 cut(s) | 749 |
| Sse9I | AATT | 3 cut(s) | 111, 444, 1051 |
| SsiI | CCGC | 5 cut(s) | 74, 96, 103, 403, 1133 |
| SspMI | CTAG | 1 cut(s) | 852 |
| StyD4I | CCNGG | 2 cut(s) | 585, 670 |
| StyI | CCWWGG | 1 cut(s) | 231 |
| TaaI | ACNGT | 6 cut(s) | 193, 470, 534, 559, 689, 763 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 3 cut(s) | 29, 108, 200 |
| TasI | AATT | 3 cut(s) | 111, 444, 1051 |
| TatI | WGTACW | 1 cut(s) | 195 |
| TauI | GCSGC | 2 cut(s) | 99, 405 |
| TfiI | GAWTC | 6 cut(s) | 329, 815, 824, 830, 878, 1004 |
| TscAI | CASTG | 2 cut(s) | 475, 714 |
| TseFI | GTSAC | 1 cut(s) | 755 |
| TseI | GCWGC | 6 cut(s) | 37, 40, 245, 508, 978, 1103 |
| Tsp45I | GTSAC | 1 cut(s) | 755 |
| TspDTI | ATGAA | 5 cut(s) | 17, 437, 491, 738, 870 |
| TspRI | CASTG | 2 cut(s) | 475, 714 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 470 |
| VpaK11BI | GGWCC | 2 cut(s) | 133, 667 |
| XapI | RAATTY | 1 cut(s) | 444 |
| XceI | RCATGY | 1 cut(s) | 749 |
| XmnI | GAANNNNTTC | 1 cut(s) | 498 |
| XspI | CTAG | 1 cut(s) | 852 |
| Zsp2I | ATGCAT | 1 cut(s) | 994 |