Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010063

Physical Location & Seq

Genomic Coordinates Forward (+)

35512178 .. 35520187

Gene Structure 8010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0222100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGCATCGCTCTCTTTTCTCTGTCTCTGTTTCTTCCTTCAAGCTTTGTTCACAGAGAAGAGAAACCATGCCTTCGTCCCACAGTAAATGCGAAGAAGAAGTTGTAGCTACCGAGGAAGACGACTCAAACAGAGACGAGACCAATGCCAAAAGCTCGAATTTCTATGACGTTTATGGGCCTCAAGCTAAAGCGGGTGTGGAATTTAAGACTCCAGAAGCTACTTCAACTCTGAATTTCGAAGAGGTACAACAACTAGTGACGTGGGTGCTTGCTGATGGCTTCATGCCTTCGTGGGTTTTTGTAAAGAACAAGCCCCTCATTCCCAAAGTGGTTATGCTTTATGTTCCAGGCCTAGATGCAGCTCTATACTTATCACAGCATCGACTACTTAAGGGTCTCGAAAAATGTTGTGGAAAACCAAGGCCTGTTTTAGCACTCAGCTATATGTCACATGAAAATCAGACGATTGATGCGCTCCTAACATGCAAACTGAAAAGAAAGAGGGAAGAGAGTGATCCAGCTAGGACAAAATCTAACCTGGAAACTCAACAAGATGATCCATCCTCTGTGGAACTTCTGAAAGATCTACCATTCCCAGTTACATTTTACACTCTTACAACAAAACAACTGGAAGACAATGGATATGTCTTCAATCAACCAGGTTTTCTTTCTACTCTTCCTGCTCCTTCTGGATCATCTCCTTATGAAATGTTAGCACTTGATTGTGAGATGTGTGTCACAGAAGAGGGTTTTGAGCTAACGAGAGCGACGCTTGTGACTATAAAAGGAGAGGTTGTGCTTGATAAATTGGTTAAACCAACAAATGCTATCAAAGATTATAACACCAGGTTTAGTGGAATCACACCTGAGATGTTAGATGGGGTGACTACAAGCCTCAAAGATATTCAGGAGGACTTCTTAAAGCTGGTTTACAAAGAGACCGTCCTAGTTGGCCATTCGTTGGAGAATGACTTATTAGCATTGAAAATTGCTCACAATCTCGTGATTGATACAGCAGTATTGTACAAGCACCCCGGTCAACGATCTTACAAATCTGCTCTTAGAGTTCTTGCCAAGAGATATCTTTCTAAAGAGATCCAGCAGTCAGGGAATGGTCATGACAGTACTGAAGATGCAAGAGCTGCTATGGAACTGGCGCTTTTAAAGATTAGACATGGACCTGACTTTGGCACAGCACCATCAGTTTTCCGGAAAAAGCTGCTAAAAGTTTTGAGTGATAATGGAAAGACCACCTCTATCATTGATGATGTTACCATTGTGAAGCGCTATGCTTCTGAATCATCCCATGCATTTCCTGTTGCCTCTGATGAGGAAGCTCTATCTAAAGCTGTAAAGGAGGCAAGGAACGAGAAAGTGCAGTTTGTCTGGACGCAATTCTCAGAATTATATCGCTTTTTAAAGAACCAAGCAGAGGATGCTGAGAAATTAGATGTAAGACTTGCTCAGATGATAAGCTTGCTTACATGCCATAAGAAGTCTGGAGATAAAAAGGGTATTAGATGGAGTTTGACGTCTGAACTAAAGGAAATTCTTATCCACGTGGACACTAGAATACGTACTCTCTATGCTGCACTACCCACTAATGCCATGCTTATCATTTGTACCGGTCATGGAGATATAGCAACTGTAGATAGATTAAACAAAATGCTTTCGGAGCGTGAGGAAACCACGATGTGTCGGGATAGCATTGTAAAGGTCTTAGCGGAGCTCAAGGCCCAAGCTGAGGTAGCTTTATGTTTTGTGGGTGTGAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000902 GO:0000910 GO:0000911 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006275 GO:0007049 GO:0008150 GO:0008270 GO:0008361 GO:0009653 GO:0009826 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010011 GO:0010556 GO:0010557 GO:0010564 GO:0010604 GO:0012505 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0032502 GO:0032506 GO:0032535 GO:0032875 GO:0032877 GO:0032989 GO:0040007 GO:0042562 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045740 GO:0045787 GO:0045793 GO:0045935 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051301 GO:0051302 GO:0051726 GO:0051781 GO:0060255 GO:0060560 GO:0061640 GO:0065007 GO:0065008 GO:0070013 GO:0071840 GO:0080090 GO:0090066 GO:0090068 GO:0090329 GO:1902410 GO:1903047 GO:2000105 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_BP

Protein Analysis

592

Amino Acids

66.27

Weight (kDa)

6.4

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	239 - 385	1.5e-11	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02980
fragaria_vesca	FvH4_2g24150 FvH4_2g24150 FvH4_2g24150
malus_domestica	MD03G1271500.v1.1 MD11G1292100.v1.1
prunus_persica	Prupe.8G247700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0291961
rosa_laevigata	RLG00000012075
rosa_multiflora	Rmu_co8386397.1_g000001 Rmu_sc0026994.1_g000001
rosa_roxburghii	Rroxscaffold_7G00175550 Rroxscaffold_7G00177990
rosa_rugosa	Rorug06G0222000 Rorug06G0222100 Rorug06G0222200
rosa_samantha	Rh6AG335800 Rh6BG343200 Rh6CG349400 Rh6DG336200
rosa_wichuraiana	Rw6G029230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	840
AatII	GACGTC	1 cut(s)	1535
AccB7I	CCANNNNNTGG	1 cut(s)	961
AccIII	TCCGGA	1 cut(s)	1209
AciI	CCGC	2 cut(s)	191, 1724
AclWI	GGATC	4 cut(s)	509, 551, 700, 1090
AcoI	YGGCCR	1 cut(s)	952
AcsI	RAATTY	4 cut(s)	157, 200, 232, 1548
AcuI	CTGAAG	1 cut(s)	1149
AcvI	CACGTG	1 cut(s)	1561
AcyI	GRCGYC	1 cut(s)	1532
AdeI	CACNNNGTG	1 cut(s)	1695
AfaI	GTAC	5 cut(s)	246, 1025, 1126, 1579, 1624
AfeI	AGCGCT	1 cut(s)	1286
AfiI	CCNNNNNNNGG	4 cut(s)	961, 1187, 1432, 1744
AflII	CTTAAG	1 cut(s)	389
AgeI	ACCGGT	1 cut(s)	1625
AgsI	TTSAA	4 cut(s)	40, 225, 652, 985
AhlI	ACTAGT	1 cut(s)	253
AjiI	CACGTC	1 cut(s)	261
AjnI	CCWGG	4 cut(s)	346, 537, 658, 845
Alw21I	GWGCWC	1 cut(s)	1731
Alw26I	GTCTC	5 cut(s)	28, 126, 131, 401, 932
AlwI	GGATC	4 cut(s)	509, 551, 700, 1090
Aor13HI	TCCGGA	1 cut(s)	1209
Aor51HI	AGCGCT	1 cut(s)	1286
AoxI	GGCC	5 cut(s)	176, 349, 422, 952, 1734
ApeKI	GCWGC	4 cut(s)	359, 1142, 1219, 1589
ApoI	RAATTY	4 cut(s)	157, 200, 232, 1548
ArsI	GACNNNNNNTTYG	2 cut(s)	927, 959
AsiGI	ACCGGT	1 cut(s)	1625
AspLEI	GCGC	3 cut(s)	475, 1159, 1287
AspS9I	GGNCC	3 cut(s)	176, 1178, 1735
AsuC2I	CCSGG	1 cut(s)	1035
AsuHPI	GGTGA	1 cut(s)	895
AsuII	TTCGAA	1 cut(s)	237
AvaII	GGWCC	1 cut(s)	1178
BaeI	ACNNNNGTAYC	2 cut(s)	1002, 1035
BalI	TGGCCA	1 cut(s)	954
BanII	GRGCYC	1 cut(s)	1731
BauI	CACGAG	1 cut(s)	1001
BbrPI	CACGTG	1 cut(s)	1561
BbsI	GAAGAC	3 cut(s)	123, 639, 640
Bbv12I	GWGCWC	1 cut(s)	1731
BbvCI	CCTCAGC	1 cut(s)	1743
BbvI	GCAGC	4 cut(s)	371, 1129, 1206, 1576
BccI	CCATC	5 cut(s)	269, 568, 872, 1207, 1515
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	4 cut(s)	348, 539, 660, 847
BcnI	CCSGG	1 cut(s)	1035
BcoDI	GTCTC	5 cut(s)	28, 126, 131, 401, 932
BcuI	ACTAGT	1 cut(s)	253
BfaI	CTAG	5 cut(s)	254, 353, 522, 947, 1569
BfmI	CTRYAG	1 cut(s)	1647
BfoI	RGCGCY	2 cut(s)	1160, 1288
BfrI	CTTAAG	1 cut(s)	389
BglII	AGATCT	1 cut(s)	583
BisI	GCNGC	4 cut(s)	360, 1143, 1220, 1590
BlsI	GCNGC	4 cut(s)	361, 1144, 1221, 1591
BmcAI	AGTACT	1 cut(s)	1126
Bme1390I	CCNGG	5 cut(s)	348, 539, 660, 847, 1035
Bme18I	GGWCC	1 cut(s)	1178
BmgBI	CACGTC	1 cut(s)	261
BmgT120I	GGNCC	3 cut(s)	176, 1178, 1735
BmrFI	CCNGG	5 cut(s)	348, 539, 660, 847, 1035
BmrI	ACTGGG	1 cut(s)	590
BmsI	GCATC	6 cut(s)	13, 346, 388, 460, 1123, 1426
BmuI	ACTGGG	1 cut(s)	590
BpiI	GAAGAC	3 cut(s)	123, 639, 640
BpmI	CTGGAG	2 cut(s)	195, 1521
Bpu10I	CCTNAGC	1 cut(s)	1743
Bpu14I	TTCGAA	1 cut(s)	237
BpuEI	CTTGAG	2 cut(s)	165, 1715
BpuMI	CCSGG	1 cut(s)	1035
BsaAI	YACGTR	2 cut(s)	1561, 1577
BsaHI	GRCGYC	1 cut(s)	1532
BsaI	GGTCTC	3 cut(s)	131, 401, 932
BsaJI	CCNNGG	3 cut(s)	111, 419, 1033
BsaWI	WCCGGW	2 cut(s)	1209, 1625
BsaXI	ACNNNNNCTCC	2 cut(s)	780, 810
Bsc4I	CCNNNNNNNGG	4 cut(s)	961, 1187, 1432, 1744
Bse118I	RCCGGY	1 cut(s)	1625
Bse1I	ACTGG	3 cut(s)	596, 633, 1158
BseAI	TCCGGA	1 cut(s)	1209
BseBI	CCWGG	4 cut(s)	348, 539, 660, 847
BseDI	CCNNGG	3 cut(s)	111, 419, 1033
BseGI	GGATG	3 cut(s)	560, 1301, 1441
BseLI	CCNNNNNNNGG	4 cut(s)	961, 1187, 1432, 1744
BseMII	CTCAG	6 cut(s)	451, 858, 1413, 1431, 1478, 1734
BseNI	ACTGG	3 cut(s)	596, 633, 1158
BseXI	GCAGC	4 cut(s)	371, 1129, 1206, 1576
BsgI	GTGCAG	2 cut(s)	1397, 1575
BshFI	GGCC	5 cut(s)	178, 351, 424, 954, 1736
BshTI	ACCGGT	1 cut(s)	1625
BsiHKAI	GWGCWC	1 cut(s)	1731
BsiSI	CCGG	3 cut(s)	1035, 1210, 1626
BslFI	GGGAC	1 cut(s)	61
BslI	CCNNNNNNNGG	4 cut(s)	961, 1187, 1432, 1744
BsmAI	GTCTC	5 cut(s)	28, 126, 131, 401, 932
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	1 cut(s)	61
BsnI	GGCC	5 cut(s)	178, 351, 424, 954, 1736
Bso31I	GGTCTC	3 cut(s)	131, 401, 932
Bsp119I	TTCGAA	1 cut(s)	237
Bsp1286I	GDGCHC	1 cut(s)	1731
Bsp13I	TCCGGA	1 cut(s)	1209
Bsp1407I	TGTACA	1 cut(s)	1023
Bsp143I	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
BspACI	CCGC	2 cut(s)	191, 1724
BspANI	GGCC	5 cut(s)	178, 351, 424, 954, 1736
BspCNI	CTCAG	6 cut(s)	450, 859, 1412, 1432, 1477, 1735
BspEI	TCCGGA	1 cut(s)	1209
BspHI	TCATGA	1 cut(s)	1117
BspPI	GGATC	4 cut(s)	509, 551, 700, 1090
BspT104I	TTCGAA	1 cut(s)	237
BspTI	CTTAAG	1 cut(s)	389
BspTNI	GGTCTC	3 cut(s)	131, 401, 932
BsrFI	RCCGGY	1 cut(s)	1625
BsrGI	TGTACA	1 cut(s)	1023
BsrI	ACTGG	3 cut(s)	596, 633, 1158
BssAI	RCCGGY	1 cut(s)	1625
BssECI	CCNNGG	3 cut(s)	111, 419, 1033
BssMI	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
BssNI	GRCGYC	1 cut(s)	1532
BssSI	CACGAG	1 cut(s)	1001
BssT1I	CCWWGG	1 cut(s)	419
Bst2BI	CACGAG	1 cut(s)	1001
Bst2UI	CCWGG	4 cut(s)	348, 539, 660, 847
Bst4CI	ACNGT	4 cut(s)	83, 943, 1124, 1648
Bst6I	CTCTTC	6 cut(s)	52, 234, 501, 681, 738, 1766
BstACI	GRCGYC	1 cut(s)	1532
BstAFI	CTTAAG	1 cut(s)	389
BstAPI	GCANNNNNTGC	2 cut(s)	1142, 1436
BstAUI	TGTACA	1 cut(s)	1023
BstBAI	YACGTR	2 cut(s)	1561, 1577
BstBI	TTCGAA	1 cut(s)	237
BstC8I	GCNNGC	2 cut(s)	270, 1478
BstDEI	CTNAG	8 cut(s)	437, 867, 1061, 1399, 1440, 1464, 1720, 1743
BstF5I	GGATG	3 cut(s)	560, 1301, 1441
BstH2I	RGCGCY	2 cut(s)	1160, 1288
BstHHI	GCGC	3 cut(s)	475, 1159, 1287
BstKTI	GATC	6 cut(s)	517, 559, 586, 695, 1046, 1098
BstMAI	GTCTC	5 cut(s)	28, 126, 131, 401, 932
BstMBI	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
BstMWI	GCNNNNNNNGC	4 cut(s)	1142, 1436, 1675, 1748
BstNI	CCWGG	4 cut(s)	348, 539, 660, 847
BstNSI	RCATGY	2 cut(s)	486, 1488
BstSCI	CCNGG	5 cut(s)	346, 537, 658, 845, 1033
BstSFI	CTRYAG	1 cut(s)	1647
BstSNI	TACGTA	1 cut(s)	1577
BstV1I	GCAGC	4 cut(s)	371, 1129, 1206, 1576
BstV2I	GAAGAC	3 cut(s)	123, 639, 640
BstX2I	RGATCY	2 cut(s)	583, 1095
BstYI	RGATCY	2 cut(s)	583, 1095
BsuRI	GGCC	5 cut(s)	178, 351, 424, 954, 1736
BtrI	CACGTC	1 cut(s)	261
BtsCI	GGATG	3 cut(s)	560, 1301, 1441
Cac8I	GCNNGC	2 cut(s)	270, 1478
CciI	TCATGA	1 cut(s)	1117
CfoI	GCGC	3 cut(s)	475, 1159, 1287
Cfr10I	RCCGGY	1 cut(s)	1625
Cfr13I	GGNCC	3 cut(s)	176, 1178, 1735
CseI	GACGC	2 cut(s)	778, 1399
CsiI	ACCWGGT	2 cut(s)	658, 845
Csp6I	GTAC	5 cut(s)	245, 1024, 1125, 1578, 1623
CspAI	ACCGGT	1 cut(s)	1625
CviQI	GTAC	5 cut(s)	245, 1024, 1125, 1578, 1623
DdeI	CTNAG	8 cut(s)	437, 867, 1061, 1399, 1440, 1464, 1720, 1743
DpnI	GATC	6 cut(s)	516, 558, 585, 694, 1045, 1097
DpnII	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
DraI	TTTAAA	2 cut(s)	1164, 1419
DraIII	CACNNNGTG	1 cut(s)	1695
EaeI	YGGCCR	1 cut(s)	952
Eam1104I	CTCTTC	6 cut(s)	52, 234, 501, 681, 738, 1766
EarI	CTCTTC	6 cut(s)	52, 234, 501, 681, 738, 1766
Ecl136II	GAGCTC	1 cut(s)	1729
Eco105I	TACGTA	1 cut(s)	1577
Eco130I	CCWWGG	1 cut(s)	419
Eco147I	AGGCCT	2 cut(s)	351, 424
Eco24I	GRGCYC	1 cut(s)	1731
Eco31I	GGTCTC	3 cut(s)	131, 401, 932
Eco32I	GATATC	1 cut(s)	1082
Eco47I	GGWCC	1 cut(s)	1178
Eco47III	AGCGCT	1 cut(s)	1286
Eco53kI	GAGCTC	1 cut(s)	1729
Eco57I	CTGAAG	1 cut(s)	1149
Eco72I	CACGTG	1 cut(s)	1561
EcoICRI	GAGCTC	1 cut(s)	1729
EcoRII	CCWGG	4 cut(s)	346, 537, 658, 845
EcoRV	GATATC	1 cut(s)	1082
EcoT14I	CCWWGG	1 cut(s)	419
EcoT22I	ATGCAT	2 cut(s)	6, 1312
EcoT38I	GRGCYC	1 cut(s)	1731
ErhI	CCWWGG	1 cut(s)	419
Esp3I	CGTCTC	1 cut(s)	126
FaqI	GGGAC	1 cut(s)	61
FauI	CCCGC	1 cut(s)	184
Fnu4HI	GCNGC	4 cut(s)	360, 1143, 1220, 1590
FokI	GGATG	3 cut(s)	547, 1288, 1448
FriOI	GRGCYC	1 cut(s)	1731
Fsp4HI	GCNGC	4 cut(s)	360, 1143, 1220, 1590
FspBI	CTAG	5 cut(s)	254, 353, 522, 947, 1569
GlaI	GCGC	3 cut(s)	474, 1158, 1286
GluI	GCNGC	4 cut(s)	360, 1143, 1220, 1590
GsuI	CTGGAG	2 cut(s)	195, 1521
HaeII	RGCGCY	2 cut(s)	1160, 1288
HaeIII	GGCC	5 cut(s)	178, 351, 424, 954, 1736
HapII	CCGG	3 cut(s)	1035, 1210, 1626
HgaI	GACGC	2 cut(s)	778, 1399
HhaI	GCGC	3 cut(s)	475, 1159, 1287
Hin1I	GRCGYC	1 cut(s)	1532
Hin6I	GCGC	3 cut(s)	473, 1157, 1285
HinP1I	GCGC	3 cut(s)	473, 1157, 1285
HincII	GTYRAC	1 cut(s)	1040
HindII	GTYRAC	1 cut(s)	1040
HindIII	AAGCTT	2 cut(s)	41, 1474
HinfI	GANTC	4 cut(s)	122, 208, 858, 1298
HpaII	CCGG	3 cut(s)	1035, 1210, 1626
HphI	GGTGA	1 cut(s)	895
Hpy166II	GTNNAC	4 cut(s)	50, 931, 1040, 1564
Hpy188I	TCNGA	9 cut(s)	231, 462, 579, 1297, 1327, 1402, 1467, 1537, 1675
Hpy8I	GTNNAC	4 cut(s)	50, 931, 1040, 1564
Hpy99I	CGWCG	1 cut(s)	772
HpyAV	CCTTC	4 cut(s)	46, 81, 297, 696
HpyCH4III	ACNGT	4 cut(s)	83, 943, 1124, 1648
HpyCH4IV	ACGT	5 cut(s)	168, 260, 1532, 1560, 1576
HpyCH4V	TGCA	7 cut(s)	4, 359, 486, 1136, 1310, 1378, 1592
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1142, 1436, 1675, 1748
HpyF3I	CTNAG	8 cut(s)	437, 867, 1061, 1399, 1440, 1464, 1720, 1743
HpySE526I	ACGT	5 cut(s)	168, 260, 1532, 1560, 1576
Hsp92I	GRCGYC	1 cut(s)	1532
HspAI	GCGC	3 cut(s)	473, 1157, 1285
Kpn2I	TCCGGA	1 cut(s)	1209
Kzo9I	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
LmnI	GCTCC	4 cut(s)	480, 688, 1675, 1726
Lsp1109I	GCAGC	4 cut(s)	371, 1129, 1206, 1576
LweI	GCATC	6 cut(s)	13, 346, 388, 460, 1123, 1426
MabI	ACCWGGT	2 cut(s)	658, 845
MaeI	CTAG	5 cut(s)	254, 353, 522, 947, 1569
MaeII	ACGT	5 cut(s)	168, 260, 1532, 1560, 1576
MaeIII	GTNAC	7 cut(s)	256, 447, 598, 736, 775, 883, 1270
MalI	GATC	6 cut(s)	516, 558, 585, 694, 1045, 1097
MboI	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
MflI	RGATCY	2 cut(s)	583, 1095
MhlI	GDGCHC	1 cut(s)	1731
MlsI	TGGCCA	1 cut(s)	954
MluCI	AATT	9 cut(s)	157, 200, 232, 806, 987, 1394, 1403, 1445, 1548
MluNI	TGGCCA	1 cut(s)	954
MlyI	GAGTC	2 cut(s)	116, 202
MmeI	TCCRAC	1 cut(s)	942
Mox20I	TGGCCA	1 cut(s)	954
Mph1103I	ATGCAT	2 cut(s)	6, 1312
MroI	TCCGGA	1 cut(s)	1209
MscI	TGGCCA	1 cut(s)	954
MseI	TTAA	7 cut(s)	204, 390, 813, 920, 1163, 1418, 1658
Msp20I	TGGCCA	1 cut(s)	954
MspCI	CTTAAG	1 cut(s)	389
MspI	CCGG	3 cut(s)	1035, 1210, 1626
MspR9I	CCNGG	5 cut(s)	348, 539, 660, 847, 1035
MvaI	CCWGG	4 cut(s)	348, 539, 660, 847
MwoI	GCNNNNNNNGC	4 cut(s)	1142, 1436, 1675, 1748
NciI	CCSGG	1 cut(s)	1035
NdeII	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
NmuCI	GTSAC	5 cut(s)	256, 447, 736, 775, 883
NsiI	ATGCAT	2 cut(s)	6, 1312
NspI	RCATGY	2 cut(s)	486, 1488
NspV	TTCGAA	1 cut(s)	237
PagI	TCATGA	1 cut(s)	1117
PceI	AGGCCT	2 cut(s)	351, 424
PfeI	GAWTC	2 cut(s)	858, 1298
PflMI	CCANNNNNTGG	1 cut(s)	961
PinAI	ACCGGT	1 cut(s)	1625
PkrI	GCNGC	4 cut(s)	361, 1144, 1221, 1591
PleI	GAGTC	2 cut(s)	116, 202
PmaCI	CACGTG	1 cut(s)	1561
PmlI	CACGTG	1 cut(s)	1561
PpsI	GAGTC	2 cut(s)	116, 202
Ppu21I	YACGTR	2 cut(s)	1561, 1577
PsiI	TTATAA	1 cut(s)	840
Psp124BI	GAGCTC	1 cut(s)	1731
Psp6I	CCWGG	4 cut(s)	346, 537, 658, 845
PspCI	CACGTG	1 cut(s)	1561
PspGI	CCWGG	4 cut(s)	346, 537, 658, 845
PspPI	GGNCC	3 cut(s)	176, 1178, 1735
PsuI	RGATCY	2 cut(s)	583, 1095
RsaI	GTAC	5 cut(s)	246, 1025, 1126, 1579, 1624
RsaNI	GTAC	5 cut(s)	245, 1024, 1125, 1578, 1623
SacI	GAGCTC	1 cut(s)	1731
SaqAI	TTAA	7 cut(s)	204, 390, 813, 920, 1163, 1418, 1658
SatI	GCNGC	4 cut(s)	360, 1143, 1220, 1590
Sau3AI	GATC	6 cut(s)	514, 556, 583, 692, 1043, 1095
Sau96I	GGNCC	3 cut(s)	176, 1178, 1735
ScaI	AGTACT	1 cut(s)	1126
SchI	GAGTC	2 cut(s)	116, 202
ScrFI	CCNGG	5 cut(s)	348, 539, 660, 847, 1035
SduI	GDGCHC	1 cut(s)	1731
SexAI	ACCWGGT	2 cut(s)	658, 845
SfaNI	GCATC	6 cut(s)	13, 346, 388, 460, 1123, 1426
SfcI	CTRYAG	1 cut(s)	1647
SfuI	TTCGAA	1 cut(s)	237
SinI	GGWCC	1 cut(s)	1178
SmlI	CTYRAG	3 cut(s)	180, 389, 1730
SmoI	CTYRAG	3 cut(s)	180, 389, 1730
SnaBI	TACGTA	1 cut(s)	1577
SpeI	ACTAGT	1 cut(s)	253
Sse9I	AATT	9 cut(s)	157, 200, 232, 806, 987, 1394, 1403, 1445, 1548
SseBI	AGGCCT	2 cut(s)	351, 424
SsiI	CCGC	2 cut(s)	191, 1724
SspMI	CTAG	5 cut(s)	254, 353, 522, 947, 1569
SstI	GAGCTC	1 cut(s)	1731
StuI	AGGCCT	2 cut(s)	351, 424
StyD4I	CCNGG	5 cut(s)	346, 537, 658, 845, 1033
StyI	CCWWGG	1 cut(s)	419
TaaI	ACNGT	4 cut(s)	83, 943, 1124, 1648
TaiI	ACGT	5 cut(s)	171, 263, 1535, 1563, 1579
TaqI	TCGA	4 cut(s)	155, 237, 382, 399
TasI	AATT	9 cut(s)	157, 200, 232, 806, 987, 1394, 1403, 1445, 1548
TatI	WGTACW	2 cut(s)	1023, 1124
TfiI	GAWTC	2 cut(s)	858, 1298
Tru1I	TTAA	7 cut(s)	204, 390, 813, 920, 1163, 1418, 1658
Tru9I	TTAA	7 cut(s)	204, 390, 813, 920, 1163, 1418, 1658
TseFI	GTSAC	5 cut(s)	256, 447, 736, 775, 883
TseI	GCWGC	4 cut(s)	359, 1142, 1219, 1589
Tsp45I	GTSAC	5 cut(s)	256, 447, 736, 775, 883
TspDTI	ATGAA	3 cut(s)	271, 468, 720
Van91I	CCANNNNNTGG	1 cut(s)	961
Vha464I	CTTAAG	1 cut(s)	389
VpaK11BI	GGWCC	1 cut(s)	1178
XapI	RAATTY	4 cut(s)	157, 200, 232, 1548
XceI	RCATGY	2 cut(s)	486, 1488
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1496
XspI	CTAG	5 cut(s)	254, 353, 522, 947, 1569
ZraI	GACGTC	1 cut(s)	1533
ZrmI	AGTACT	1 cut(s)	1126
Zsp2I	ATGCAT	2 cut(s)	6, 1312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.