CRAL/TRIO, N-terminal domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75170 AT1G75170 AT1G75170 |
| fragaria_vesca | FvH4_2g39850 FvH4_2g39850 |
| malus_domestica | MD08G1032100.v1.1 MD15G1028100.v1.1 |
| prunus_persica | Prupe.1G379800_v2.0.a1 Prupe.1G379800_v2.0.a1 Prupe.1G379800_v2.0.a1 |
| pyrus_communis | pycom08g02540 pycom15g02450 |
| rosa_chinensis | RchiOBHm_Chr6g0300991 |
| rosa_laevigata | RLG00000011287 RLG00000034667 |
| rosa_multiflora | Rmu_co8375471.1_g000001 Rmu_sc0011701.1_g000029 |
| rosa_roxburghii | Rroxscaffold_7G00167280 |
| rosa_rugosa | Rorug06G0299800 Rorug06G0299800 |
| rosa_samantha | Rh6AG413700 Rh6BG420600 Rh6CG428200 Rh6DG413600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 200 |
| AccI | GTMKAC | 2 cut(s) | 681, 1308 |
| AccII | CGCG | 2 cut(s) | 292, 1458 |
| AciI | CCGC | 5 cut(s) | 24, 151, 231, 290, 356 |
| AclWI | GGATC | 8 cut(s) | 38, 51, 245, 1043, 1427, 1457, 1470, 1491 |
| AcoI | YGGCCR | 2 cut(s) | 148, 820 |
| AcsI | RAATTY | 4 cut(s) | 642, 731, 752, 1378 |
| AfaI | GTAC | 4 cut(s) | 274, 696, 914, 1118 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 146, 398, 676 |
| AflII | CTTAAG | 1 cut(s) | 404 |
| AgsI | TTSAA | 9 cut(s) | 321, 377, 688, 758, 1174, 1357, 1399, 1424, 1518 |
| AjnI | CCWGG | 3 cut(s) | 153, 569, 721 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1260, 1292 |
| AluBI | AGCT | 6 cut(s) | 52, 61, 505, 706, 841, 961 |
| AluI | AGCT | 6 cut(s) | 52, 61, 505, 706, 841, 961 |
| AlwI | GGATC | 8 cut(s) | 38, 51, 245, 1043, 1427, 1457, 1470, 1491 |
| AoxI | GGCC | 3 cut(s) | 148, 820, 1263 |
| ApeKI | GCWGC | 2 cut(s) | 552, 863 |
| ApoI | RAATTY | 4 cut(s) | 642, 731, 752, 1378 |
| AseI | ATTAAT | 1 cut(s) | 897 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1051, 1275 |
| AspS9I | GGNCC | 2 cut(s) | 1264, 1319 |
| AsuC2I | CCSGG | 1 cut(s) | 65 |
| AsuHPI | GGTGA | 4 cut(s) | 66, 169, 279, 1544 |
| AvaII | GGWCC | 1 cut(s) | 1319 |
| AxyI | CCTNAGG | 1 cut(s) | 833 |
| BaeGI | GKGCMC | 1 cut(s) | 205 |
| BamHI | GGATCC | 2 cut(s) | 43, 1462 |
| BanI | GGYRCC | 1 cut(s) | 200 |
| BanII | GRGCYC | 1 cut(s) | 353 |
| BbvI | GCAGC | 2 cut(s) | 539, 850 |
| BccI | CCATC | 6 cut(s) | 449, 593, 726, 1090, 1184, 1523 |
| BceAI | ACGGC | 2 cut(s) | 639, 807 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 178, 212, 1229, 1263 |
| BciT130I | CCWGG | 3 cut(s) | 155, 571, 723 |
| BciVI | GTATCC | 2 cut(s) | 613, 958 |
| BcnI | CCSGG | 1 cut(s) | 65 |
| BfaI | CTAG | 3 cut(s) | 701, 1077, 1155 |
| BfmI | CTRYAG | 2 cut(s) | 553, 1030 |
| BfrI | CTTAAG | 1 cut(s) | 404 |
| BfuI | GTATCC | 2 cut(s) | 613, 958 |
| BisI | GCNGC | 5 cut(s) | 25, 151, 231, 553, 864 |
| BlsI | GCNGC | 5 cut(s) | 26, 152, 232, 554, 865 |
| Bme1390I | CCNGG | 4 cut(s) | 65, 155, 571, 723 |
| Bme18I | GGWCC | 1 cut(s) | 1319 |
| BmgT120I | GGNCC | 2 cut(s) | 1264, 1319 |
| BmiI | GGNNCC | 5 cut(s) | 45, 202, 1062, 1464, 1584 |
| BmrFI | CCNGG | 4 cut(s) | 65, 155, 571, 723 |
| BmsI | GCATC | 4 cut(s) | 166, 188, 565, 1255 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1526, 1558 |
| Bpu10I | CCTNAGC | 1 cut(s) | 48 |
| BpuEI | CTTGAG | 2 cut(s) | 615, 1181 |
| BpuMI | CCSGG | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 3 cut(s) | 205, 570, 1064 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1127, 1157 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 146, 398, 676 |
| Bse1I | ACTGG | 7 cut(s) | 45, 93, 151, 553, 732, 823, 1581 |
| Bse21I | CCTNAGG | 1 cut(s) | 833 |
| BseBI | CCWGG | 3 cut(s) | 155, 571, 723 |
| BseDI | CCNNGG | 3 cut(s) | 205, 570, 1064 |
| BseGI | GGATG | 6 cut(s) | 460, 580, 718, 1195, 1389, 1573 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 146, 398, 676 |
| BseMII | CTCAG | 7 cut(s) | 39, 137, 155, 689, 847, 899, 1314 |
| BseNI | ACTGG | 7 cut(s) | 45, 93, 151, 553, 732, 823, 1581 |
| BseRI | GAGGAG | 2 cut(s) | 1148, 1250 |
| BseSI | GKGCMC | 1 cut(s) | 205 |
| BseXI | GCAGC | 2 cut(s) | 539, 850 |
| BseYI | CCCAGC | 2 cut(s) | 233, 346 |
| BsgI | GTGCAG | 1 cut(s) | 488 |
| Bsh1236I | CGCG | 2 cut(s) | 292, 1458 |
| BshFI | GGCC | 3 cut(s) | 150, 822, 1265 |
| BshNI | GGYRCC | 1 cut(s) | 200 |
| BsiSI | CCGG | 1 cut(s) | 65 |
| BslFI | GGGAC | 1 cut(s) | 81 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 146, 398, 676 |
| BsmFI | GGGAC | 1 cut(s) | 81 |
| BsmI | GAATGC | 3 cut(s) | 578, 1262, 1543 |
| BsnI | GGCC | 3 cut(s) | 150, 822, 1265 |
| Bsp1286I | GDGCHC | 2 cut(s) | 205, 353 |
| Bsp143I | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| BspACI | CCGC | 5 cut(s) | 24, 151, 231, 290, 356 |
| BspANI | GGCC | 3 cut(s) | 150, 822, 1265 |
| BspCNI | CTCAG | 7 cut(s) | 40, 136, 154, 688, 846, 900, 1315 |
| BspFNI | CGCG | 2 cut(s) | 292, 1458 |
| BspLI | GGNNCC | 5 cut(s) | 45, 202, 1062, 1464, 1584 |
| BspMAI | CTGCAG | 1 cut(s) | 557 |
| BspPI | GGATC | 8 cut(s) | 38, 51, 245, 1043, 1427, 1457, 1470, 1491 |
| BspQI | GCTCTTC | 1 cut(s) | 322 |
| BspT107I | GGYRCC | 1 cut(s) | 200 |
| BspTI | CTTAAG | 1 cut(s) | 404 |
| BsrI | ACTGG | 7 cut(s) | 45, 93, 151, 553, 732, 823, 1581 |
| BssECI | CCNNGG | 3 cut(s) | 205, 570, 1064 |
| BssMI | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| BssT1I | CCWWGG | 1 cut(s) | 205 |
| Bst2UI | CCWGG | 3 cut(s) | 155, 571, 723 |
| Bst4CI | ACNGT | 2 cut(s) | 484, 778 |
| Bst6I | CTCTTC | 3 cut(s) | 322, 346, 882 |
| BstAFI | CTTAAG | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 503 |
| BstDEI | CTNAG | 8 cut(s) | 48, 123, 141, 218, 675, 833, 908, 1323 |
| BstEII | GGTNACC | 1 cut(s) | 1013 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 674 |
| BstF5I | GGATG | 6 cut(s) | 460, 580, 718, 1195, 1389, 1573 |
| BstFNI | CGCG | 2 cut(s) | 292, 1458 |
| BstKTI | GATC | 8 cut(s) | 46, 240, 812, 1038, 1086, 1435, 1465, 1486 |
| BstMBI | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 58, 89, 230, 312 |
| BstNI | CCWGG | 3 cut(s) | 155, 571, 723 |
| BstNSI | RCATGY | 1 cut(s) | 878 |
| BstPI | GGTNACC | 1 cut(s) | 1013 |
| BstSCI | CCNGG | 4 cut(s) | 63, 153, 569, 721 |
| BstSFI | CTRYAG | 2 cut(s) | 553, 1030 |
| BstSLI | GKGCMC | 1 cut(s) | 205 |
| BstUI | CGCG | 2 cut(s) | 292, 1458 |
| BstV1I | GCAGC | 2 cut(s) | 539, 850 |
| BstX2I | RGATCY | 2 cut(s) | 43, 1462 |
| BstYI | RGATCY | 2 cut(s) | 43, 1462 |
| Bsu36I | CCTNAGG | 1 cut(s) | 833 |
| BsuI | GTATCC | 2 cut(s) | 613, 958 |
| BsuRI | GGCC | 3 cut(s) | 150, 822, 1265 |
| BtsCI | GGATG | 6 cut(s) | 460, 580, 718, 1195, 1389, 1573 |
| BtsI | GCAGTG | 2 cut(s) | 245, 562 |
| BtsIMutI | CAGTG | 5 cut(s) | 38, 131, 245, 562, 1574 |
| Cac8I | GCNNGC | 1 cut(s) | 503 |
| Cfr13I | GGNCC | 2 cut(s) | 1264, 1319 |
| CseI | GACGC | 1 cut(s) | 20 |
| Csp6I | GTAC | 4 cut(s) | 273, 695, 913, 1117 |
| CviQI | GTAC | 4 cut(s) | 273, 695, 913, 1117 |
| DdeI | CTNAG | 8 cut(s) | 48, 123, 141, 218, 675, 833, 908, 1323 |
| DpnI | GATC | 8 cut(s) | 45, 239, 811, 1037, 1085, 1434, 1464, 1485 |
| DpnII | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| DraI | TTTAAA | 2 cut(s) | 640, 648 |
| EaeI | YGGCCR | 2 cut(s) | 148, 820 |
| Eam1104I | CTCTTC | 3 cut(s) | 322, 346, 882 |
| EarI | CTCTTC | 3 cut(s) | 322, 346, 882 |
| Eco130I | CCWWGG | 1 cut(s) | 205 |
| Eco24I | GRGCYC | 1 cut(s) | 353 |
| Eco47I | GGWCC | 1 cut(s) | 1319 |
| Eco81I | CCTNAGG | 1 cut(s) | 833 |
| Eco91I | GGTNACC | 1 cut(s) | 1013 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 674 |
| EcoO65I | GGTNACC | 1 cut(s) | 1013 |
| EcoRII | CCWGG | 3 cut(s) | 153, 569, 721 |
| EcoT14I | CCWWGG | 1 cut(s) | 205 |
| EcoT22I | ATGCAT | 3 cut(s) | 181, 580, 1262 |
| EcoT38I | GRGCYC | 1 cut(s) | 353 |
| ErhI | CCWWGG | 1 cut(s) | 205 |
| FaqI | GGGAC | 1 cut(s) | 81 |
| FauNDI | CATATG | 1 cut(s) | 450 |
| FblI | GTMKAC | 2 cut(s) | 681, 1308 |
| Fnu4HI | GCNGC | 5 cut(s) | 25, 151, 231, 553, 864 |
| FokI | GGATG | 6 cut(s) | 467, 587, 705, 1202, 1376, 1580 |
| FriOI | GRGCYC | 1 cut(s) | 353 |
| Fsp4HI | GCNGC | 5 cut(s) | 25, 151, 231, 553, 864 |
| FspBI | CTAG | 3 cut(s) | 701, 1077, 1155 |
| GluI | GCNGC | 5 cut(s) | 25, 151, 231, 553, 864 |
| GsaI | CCCAGC | 2 cut(s) | 237, 350 |
| HaeIII | GGCC | 3 cut(s) | 150, 822, 1265 |
| HapII | CCGG | 1 cut(s) | 65 |
| HgaI | GACGC | 1 cut(s) | 20 |
| HinfI | GANTC | 2 cut(s) | 1200, 1571 |
| HpaII | CCGG | 1 cut(s) | 65 |
| HphI | GGTGA | 4 cut(s) | 66, 169, 279, 1544 |
| Hpy166II | GTNNAC | 6 cut(s) | 275, 682, 1074, 1117, 1151, 1309 |
| Hpy188I | TCNGA | 7 cut(s) | 144, 168, 587, 658, 909, 1065, 1132 |
| Hpy188III | TCNNGA | 9 cut(s) | 47, 423, 701, 749, 758, 813, 1374, 1430, 1451 |
| Hpy8I | GTNNAC | 6 cut(s) | 275, 682, 1074, 1117, 1151, 1309 |
| Hpy99I | CGWCG | 1 cut(s) | 113 |
| HpyAV | CCTTC | 3 cut(s) | 261, 1082, 1321 |
| HpyCH4III | ACNGT | 2 cut(s) | 484, 778 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 58, 89, 230, 312 |
| HpyF3I | CTNAG | 8 cut(s) | 48, 123, 141, 218, 675, 833, 908, 1323 |
| Kzo9I | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| LguI | GCTCTTC | 1 cut(s) | 322 |
| LmnI | GCTCC | 5 cut(s) | 66, 838, 958, 1237, 1588 |
| Lsp1109I | GCAGC | 2 cut(s) | 539, 850 |
| LweI | GCATC | 4 cut(s) | 166, 188, 565, 1255 |
| MaeI | CTAG | 3 cut(s) | 701, 1077, 1155 |
| MaeIII | GTNAC | 4 cut(s) | 72, 484, 565, 1013 |
| MalI | GATC | 8 cut(s) | 45, 239, 811, 1037, 1085, 1434, 1464, 1485 |
| MboI | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| MflI | RGATCY | 2 cut(s) | 43, 1462 |
| MhlI | GDGCHC | 2 cut(s) | 205, 353 |
| MluCI | AATT | 8 cut(s) | 68, 362, 426, 642, 664, 731, 752, 1378 |
| MlyI | GAGTC | 1 cut(s) | 1209 |
| Mph1103I | ATGCAT | 3 cut(s) | 181, 580, 1262 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1051, 1275 |
| MseI | TTAA | 7 cut(s) | 405, 477, 639, 647, 897, 1386, 1591 |
| MslI | CAYNNNNRTG | 3 cut(s) | 453, 879, 933 |
| MspA1I | CMGCKG | 1 cut(s) | 233 |
| MspCI | CTTAAG | 1 cut(s) | 404 |
| MspI | CCGG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 4 cut(s) | 65, 155, 571, 723 |
| Mva1269I | GAATGC | 3 cut(s) | 578, 1262, 1543 |
| MvaI | CCWGG | 3 cut(s) | 155, 571, 723 |
| MvnI | CGCG | 2 cut(s) | 292, 1458 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 58, 89, 230, 312 |
| NciI | CCSGG | 1 cut(s) | 65 |
| NdeI | CATATG | 1 cut(s) | 450 |
| NdeII | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| NlaIV | GGNNCC | 5 cut(s) | 45, 202, 1062, 1464, 1584 |
| NmuCI | GTSAC | 2 cut(s) | 72, 565 |
| NsiI | ATGCAT | 3 cut(s) | 181, 580, 1262 |
| NspI | RCATGY | 1 cut(s) | 878 |
| PciSI | GCTCTTC | 1 cut(s) | 322 |
| PctI | GAATGC | 3 cut(s) | 578, 1262, 1543 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1051, 1275 |
| PfeI | GAWTC | 1 cut(s) | 1571 |
| PfoI | TCCNGGA | 2 cut(s) | 63, 721 |
| PkrI | GCNGC | 5 cut(s) | 26, 152, 232, 554, 865 |
| PleI | GAGTC | 1 cut(s) | 1208 |
| PpsI | GAGTC | 1 cut(s) | 1208 |
| PshBI | ATTAAT | 1 cut(s) | 897 |
| Psp6I | CCWGG | 3 cut(s) | 153, 569, 721 |
| PspEI | GGTNACC | 1 cut(s) | 1013 |
| PspFI | CCCAGC | 2 cut(s) | 233, 346 |
| PspGI | CCWGG | 3 cut(s) | 153, 569, 721 |
| PspN4I | GGNNCC | 5 cut(s) | 45, 202, 1062, 1464, 1584 |
| PspPI | GGNCC | 2 cut(s) | 1264, 1319 |
| PstI | CTGCAG | 1 cut(s) | 557 |
| PsuI | RGATCY | 2 cut(s) | 43, 1462 |
| RsaI | GTAC | 4 cut(s) | 274, 696, 914, 1118 |
| RsaNI | GTAC | 4 cut(s) | 273, 695, 913, 1117 |
| RseI | CAYNNNNRTG | 3 cut(s) | 453, 879, 933 |
| SapI | GCTCTTC | 1 cut(s) | 322 |
| SaqAI | TTAA | 7 cut(s) | 405, 477, 639, 647, 897, 1386, 1591 |
| SatI | GCNGC | 5 cut(s) | 25, 151, 231, 553, 864 |
| Sau3AI | GATC | 8 cut(s) | 43, 237, 809, 1035, 1083, 1432, 1462, 1483 |
| Sau96I | GGNCC | 2 cut(s) | 1264, 1319 |
| SchI | GAGTC | 1 cut(s) | 1209 |
| ScrFI | CCNGG | 4 cut(s) | 65, 155, 571, 723 |
| SduI | GDGCHC | 2 cut(s) | 205, 353 |
| SfaNI | GCATC | 4 cut(s) | 166, 188, 565, 1255 |
| SfcI | CTRYAG | 2 cut(s) | 553, 1030 |
| SinI | GGWCC | 1 cut(s) | 1319 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 453, 879, 933 |
| SmlI | CTYRAG | 3 cut(s) | 404, 630, 1160 |
| SmoI | CTYRAG | 3 cut(s) | 404, 630, 1160 |
| Sse9I | AATT | 8 cut(s) | 68, 362, 426, 642, 664, 731, 752, 1378 |
| SsiI | CCGC | 5 cut(s) | 24, 151, 231, 290, 356 |
| SspI | AATATT | 2 cut(s) | 792, 1050 |
| SspMI | CTAG | 3 cut(s) | 701, 1077, 1155 |
| StyD4I | CCNGG | 4 cut(s) | 63, 153, 569, 721 |
| StyI | CCWWGG | 1 cut(s) | 205 |
| TaaI | ACNGT | 2 cut(s) | 484, 778 |
| TaqI | TCGA | 1 cut(s) | 1086 |
| TasI | AATT | 8 cut(s) | 68, 362, 426, 642, 664, 731, 752, 1378 |
| TatI | WGTACW | 3 cut(s) | 272, 694, 1116 |
| TauI | GCSGC | 3 cut(s) | 27, 153, 233 |
| TfiI | GAWTC | 1 cut(s) | 1571 |
| Tru1I | TTAA | 7 cut(s) | 405, 477, 639, 647, 897, 1386, 1591 |
| Tru9I | TTAA | 7 cut(s) | 405, 477, 639, 647, 897, 1386, 1591 |
| TscAI | CASTG | 5 cut(s) | 45, 131, 252, 562, 1581 |
| TseFI | GTSAC | 2 cut(s) | 72, 565 |
| TseI | GCWGC | 2 cut(s) | 552, 863 |
| Tsp45I | GTSAC | 2 cut(s) | 72, 565 |
| TspDTI | ATGAA | 7 cut(s) | 571, 939, 973, 1111, 1119, 1402, 1584 |
| TspGWI | ACGGA | 2 cut(s) | 414, 1225 |
| TspRI | CASTG | 5 cut(s) | 45, 131, 252, 562, 1581 |
| Vha464I | CTTAAG | 1 cut(s) | 404 |
| VpaK11BI | GGWCC | 1 cut(s) | 1319 |
| VspI | ATTAAT | 1 cut(s) | 897 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 674 |
| XapI | RAATTY | 4 cut(s) | 642, 731, 752, 1378 |
| XbaI | TCTAGA | 1 cut(s) | 700 |
| XceI | RCATGY | 1 cut(s) | 878 |
| XmiI | GTMKAC | 2 cut(s) | 681, 1308 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1051, 1275 |
| XspI | CTAG | 3 cut(s) | 701, 1077, 1155 |
| Zsp2I | ATGCAT | 3 cut(s) | 181, 580, 1262 |