Rorug06G0408100
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0011275
Physical Location & Seq
Forward (+)
55099642 .. 55102463
2822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0408100.1

Sequence Viewer

Length: 1779 bp
ATGTCGCCACGGATTCTAGTCTTTGCTATTCTTATGCTGCCCTTCTTCGTCTCTCTGGCTCTTGCCGAAGTGCATTACTATGATTTTGTAGTAAAGGAGGTAAACTTCACCAGATTATGTGAAAATAAGCTCATGTTGGTTGTTAACGAAAGTTATCCAGGTCCAGCAATCCGAGCTCGCAAAGGGGATACAGTATACGTTAATGTTTACAATGAAGGATTTTATGGCTTCACTATTCATTGGCATGGAGTAAAGCAGCCAAGAAACCCGTGGTTTGATGGCCCTGAGTATGTGACACAGTGTCCAATTGCACCCGGTACAAATTTCACTTATCAAGTGCAATTGACTAAGGAAGAAGGAACCGTATGGTGGCATGCTCATAGTGACTGGACAAGAGCCAGTGTTCACGGTGCTATTGTAGTTTTGCCTGCTCTTGGTACCACGTTTCCATTTCCTGAGCCGGATGAAGAGGAGATCATTGTTTTCGGATCTTGGTACCTGGGAAATTTGAGAGAACGAGTTGAGGAATCTTTGCAGCCTGGAAGTACCGAGACTCTACCACAGTCAGATGCTTACACCATCAATGGCCAACCCGGCGATTTTCTTCCATGCTCCATAAATACAACATGGCGTCGTAGGGTGGACTACGGCAAGACTTATCTTCTTCGCCTGGTGAATGCTAACATCGATGCAGAGTTTTTCTTTGCAATTGCTGAGCACAACCTCACTGTGGTTGGACTGGACGGAGCCTACACAAAACCCATCAATACCAGATACATAGTGGTAACTCCTGGACAAACAATGGATGTATTGCTGAATGCAAATTCTACTCCGGGGCTCTATTACATGGCTGGTAGACAATACCTTAGTACTACATCCGACACCGGCTTCGACCATATGAATGCTACTGCAATCCTTCAATATAATGGCAACTATACCACAACCGACGCTCCTTTATTTCCCGAGCACCTTCCCATGTACATGTCCCAAGCAGAAGCGTTCAATTTCACCAATAAGATTAGAAGCTTAGCCACACCAGAATATCCCGTTAATGTCCCGAAGGAGAGTGAAGTTACTACACGAATGTTCATAACAGCTTCCATGAACTCTCTTTACTGTGCTCCAGATTTAGGCCCCACCTGCTTAAACATAAGCTTTGCTACAAGCGTCAATAACATCAGCTGGGTCAATCCAACTACAGACTCTATCTTGCAAGCCTACTACAAGAACATAAGCAATCCGATTTACGAAACAGATTTTCCAGACGAGCCGCCTACTTATTATAACTTCACAGATGGAGGGACGACGCTTTCTACAGTGTTGACGATCCAAGGTACAAAGGTTAAGGTGCTAGACTATAATGAAACTGTTGAGATTGTGTTCCAAGGGACTAATGTGATGGGAGGCGCCGTGAATCATCCAATGCATTTGCATGGACATAGTTTCTACGTGCTAGGATTTGGTTTCGGATCCTTTGACCCGTTGAAGGACCCTAAAGGCTATAATTTGGTCGATCCTCCTTATGTGGCTACATTCGTTACTCCAAAAAATGGATGGCTAACAATAAGATTTGTAGCTGATAATCCTGGCGTGTGGTTTTGGCATTGTCATGTAGAGAGACATATGACATGGGGTATGGAGGCCGCTTTTATAATCAAGGACGGAGGCACAGCTGAGACTAGTATGCTACCCCCACCAGCTCAAATGCCTTCCTGTGATGTTCCATTGGATTCTGCTATCAAAAATTACGAGGCCTTGATTGAGAAGCAAATTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009832 GO:0009834 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042546 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044087 GO:0044089 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901347 GO:1901348 GO:1901363 GO:1901698 GO:1901700 GO:1902074 GO:1903338 GO:1903339 GO:1903340 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2000652 GO:2001023 GO:2001038 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

592

Amino Acids

66.51

Weight (kDa)

5.04

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 31 - 143 2.2e-38 Multicopper oxidase
Cu-oxidase PF00394 158 - 311 5e-33 Multicopper oxidase
Cu-oxidase_2 PF07731 419 - 554 7.1e-40 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011275)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17950 AT1G73410 AT1G73410
fragaria_vesca FvH4_5g17970
malus_domestica MD06G1235300.v1.1 MD14G1242300.v1.1
prunus_persica Prupe.5G240000_v2.0.a1
pyrus_communis pycom06g21020 pycom14g20370
rosa_chinensis RchiOBHm_Chr7g0177631
rosa_laevigata RLG00000005518
rosa_multiflora Rmu_ssc0000330.1_g000016
rosa_roxburghii Rroxscaffold_3G00275710
rosa_rugosa Rorug06G0408100 Rorug06G0408200
rosa_samantha Rh7AG007400 Rh7BG007400 Rh7CG007900 Rh7DG007600
rosa_wichuraiana Rw7G000630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1284, 1652
AarI CACCTGC 1 cut(s) 1148
Acc36I ACCTGC 1 cut(s) 1148
Acc65I GGTACC 2 cut(s) 437, 495
AccB1I GGYRCC 3 cut(s) 437, 495, 1406
AccB7I CCANNNNNTGG 1 cut(s) 1550
AccI GTMKAC 2 cut(s) 195, 856
AciI CCGC 2 cut(s) 1271, 1644
AclWI GGATC 5 cut(s) 496, 1321, 1464, 1477, 1508
AcoI YGGCCR 1 cut(s) 586
AcsI RAATTY 3 cut(s) 322, 505, 823
AcyI GRCGYC 2 cut(s) 631, 1407
AfaI GTAC 7 cut(s) 319, 439, 497, 547, 871, 980, 1336
AfiI CCNNNNNNNGG 6 cut(s) 369, 434, 730, 1130, 1486, 1550
AflIII ACRYGT 1 cut(s) 981
AgsI TTSAA 3 cut(s) 920, 1003, 1486
AhdI GACNNNNNGTC 1 cut(s) 300
AhlI ACTAGT 1 cut(s) 1679
AjnI CCWGG 6 cut(s) 157, 498, 538, 669, 790, 1585
AluBI AGCT 9 cut(s) 130, 176, 1026, 1097, 1155, 1182, 1577, 1673, 1700
AluI AGCT 9 cut(s) 130, 176, 1026, 1097, 1155, 1182, 1577, 1673, 1700
Alw21I GWGCWC 4 cut(s) 178, 720, 969, 1123
Alw26I GTCTC 4 cut(s) 55, 545, 1612, 1670
AlwI GGATC 5 cut(s) 496, 1321, 1464, 1477, 1508
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 5 cut(s) 280, 586, 1132, 1641, 1752
ApeKI GCWGC 3 cut(s) 37, 256, 535
ApoI RAATTY 3 cut(s) 322, 505, 823
ArsI GACNNNNNNTTYG 2 cut(s) 872, 904
Asp718I GGTACC 2 cut(s) 437, 495
AspLEI GCGC 1 cut(s) 1409
AspS9I GGNCC 4 cut(s) 161, 281, 1133, 1489
AsuC2I CCSGG 3 cut(s) 315, 594, 834
AsuHPI GGTGA 3 cut(s) 100, 685, 1000
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 2 cut(s) 161, 1489
BaeI ACNNNNGTAYC 2 cut(s) 1326, 1359
BalI TGGCCA 1 cut(s) 588
BamHI GGATCC 1 cut(s) 1469
BanI GGYRCC 3 cut(s) 437, 495, 1406
BanII GRGCYC 2 cut(s) 178, 840
Bbv12I GWGCWC 4 cut(s) 178, 720, 969, 1123
BbvI GCAGC 3 cut(s) 24, 268, 547
BccI CCATC 6 cut(s) 272, 587, 770, 1289, 1393, 1548
BceAI ACGGC 2 cut(s) 664, 1394
BciT130I CCWGG 6 cut(s) 159, 500, 540, 671, 792, 1587
BciVI GTATCC 1 cut(s) 181
BcnI CCSGG 3 cut(s) 315, 594, 834
BcoDI GTCTC 4 cut(s) 55, 545, 1612, 1670
BcuI ACTAGT 1 cut(s) 1679
BfaI CTAG 4 cut(s) 17, 1352, 1454, 1680
BfmI CTRYAG 2 cut(s) 1197, 1314
BfoI RGCGCY 1 cut(s) 1410
BfuAI ACCTGC 1 cut(s) 1148
BfuI GTATCC 1 cut(s) 181
BglI GCCNNNNNGGC 1 cut(s) 594
BisI GCNGC 5 cut(s) 38, 257, 536, 1271, 1644
BlpI GCTNAGC 2 cut(s) 714, 1027
BlsI GCNGC 5 cut(s) 39, 258, 537, 1272, 1645
BmcAI AGTACT 1 cut(s) 871
Bme1390I CCNGG 9 cut(s) 159, 315, 500, 540, 594, 671, 792, 834, 1587
Bme18I GGWCC 2 cut(s) 161, 1489
BmeRI GACNNNNNGTC 1 cut(s) 300
BmeT110I CYCGRG 1 cut(s) 962
BmgT120I GGNCC 4 cut(s) 161, 281, 1133, 1489
BmiI GGNNCC 8 cut(s) 361, 439, 497, 748, 1135, 1408, 1471, 1491
BmrFI CCNGG 9 cut(s) 159, 315, 500, 540, 594, 671, 792, 834, 1587
BmsI GCATC 2 cut(s) 559, 679
BpmI CTGGAG 1 cut(s) 1107
Bpu10I CCTNAGC 1 cut(s) 456
Bpu1102I GCTNAGC 2 cut(s) 714, 1027
BpuMI CCSGG 3 cut(s) 315, 594, 834
Bsa29I ATCGAT 1 cut(s) 687
BsaAI YACGTR 1 cut(s) 1450
BsaHI GRCGYC 2 cut(s) 631, 1407
BsaJI CCNNGG 6 cut(s) 8, 269, 499, 833, 1330, 1384
BsaXI ACNNNNNCTCC 4 cut(s) 934, 964, 1395, 1425
Bsc4I CCNNNNNNNGG 6 cut(s) 369, 434, 730, 1130, 1486, 1550
Bse118I RCCGGY 1 cut(s) 884
Bse1I ACTGG 3 cut(s) 392, 399, 744
BseBI CCWGG 6 cut(s) 159, 500, 540, 671, 792, 1587
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 6 cut(s) 8, 269, 499, 833, 1330, 1384
BseGI GGATG 5 cut(s) 469, 811, 875, 1417, 1559
BseLI CCNNNNNNNGG 6 cut(s) 369, 434, 730, 1130, 1486, 1550
BseMII CTCAG 4 cut(s) 276, 447, 705, 1665
BseNI ACTGG 3 cut(s) 392, 399, 744
BseRI GAGGAG 1 cut(s) 485
BseXI GCAGC 3 cut(s) 24, 268, 547
BseYI CCCAGC 1 cut(s) 1182
BshFI GGCC 5 cut(s) 282, 588, 1134, 1643, 1754
BshNI GGYRCC 3 cut(s) 437, 495, 1406
BshVI ATCGAT 1 cut(s) 687
BsiHKAI GWGCWC 4 cut(s) 178, 720, 969, 1123
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 5 cut(s) 315, 461, 594, 833, 885
BslFI GGGAC 4 cut(s) 970, 1040, 1315, 1402
BslI CCNNNNNNNGG 6 cut(s) 369, 434, 730, 1130, 1486, 1550
BsmAI GTCTC 4 cut(s) 55, 545, 1612, 1670
BsmBI CGTCTC 1 cut(s) 55
BsmFI GGGAC 4 cut(s) 970, 1040, 1315, 1402
BsmI GAATGC 3 cut(s) 682, 823, 907
BsnI GGCC 5 cut(s) 282, 588, 1134, 1643, 1754
BsoBI CYCGRG 1 cut(s) 962
Bsp1286I GDGCHC 5 cut(s) 178, 720, 840, 969, 1123
Bsp1407I TGTACA 1 cut(s) 978
Bsp143I GATC 5 cut(s) 474, 488, 1326, 1469, 1513
Bsp1720I GCTNAGC 2 cut(s) 714, 1027
BspACI CCGC 2 cut(s) 1271, 1644
BspANI GGCC 5 cut(s) 282, 588, 1134, 1643, 1754
BspCNI CTCAG 4 cut(s) 277, 448, 706, 1666
BspDI ATCGAT 1 cut(s) 687
BspLI GGNNCC 8 cut(s) 361, 439, 497, 748, 1135, 1408, 1471, 1491
BspMI ACCTGC 1 cut(s) 1148
BspPI GGATC 5 cut(s) 496, 1321, 1464, 1477, 1508
BspT107I GGYRCC 3 cut(s) 437, 495, 1406
BsrFI RCCGGY 1 cut(s) 884
BsrGI TGTACA 1 cut(s) 978
BsrI ACTGG 3 cut(s) 392, 399, 744
BssAI RCCGGY 1 cut(s) 884
BssECI CCNNGG 6 cut(s) 8, 269, 499, 833, 1330, 1384
BssMI GATC 5 cut(s) 474, 488, 1326, 1469, 1513
BssNAI GTATAC 1 cut(s) 196
BssNI GRCGYC 2 cut(s) 631, 1407
BssT1I CCWWGG 2 cut(s) 1330, 1384
Bst1107I GTATAC 1 cut(s) 196
Bst2UI CCWGG 6 cut(s) 159, 500, 540, 671, 792, 1587
Bst4CI ACNGT 9 cut(s) 193, 300, 364, 410, 564, 730, 1118, 1318, 1369
Bst6I CTCTTC 1 cut(s) 462
BstACI GRCGYC 2 cut(s) 631, 1407
BstAUI TGTACA 1 cut(s) 978
BstBAI YACGTR 1 cut(s) 1450
BstC8I GCNNGC 4 cut(s) 178, 375, 429, 1215
BstDEI CTNAG 7 cut(s) 285, 348, 456, 714, 866, 1027, 1674
BstDSI CCRYGG 2 cut(s) 8, 269
BstF5I GGATG 5 cut(s) 469, 811, 875, 1417, 1559
BstH2I RGCGCY 1 cut(s) 1410
BstHHI GCGC 1 cut(s) 1409
BstKTI GATC 5 cut(s) 477, 491, 1329, 1472, 1516
BstMAI GTCTC 4 cut(s) 55, 545, 1612, 1670
BstMBI GATC 5 cut(s) 474, 488, 1326, 1469, 1513
BstMWI GCNNNNNNNGC 3 cut(s) 173, 594, 1140
BstNI CCWGG 6 cut(s) 159, 500, 540, 671, 792, 1587
BstNSI RCATGY 2 cut(s) 377, 985
BstSCI CCNGG 9 cut(s) 157, 313, 498, 538, 592, 669, 790, 832, 1585
BstSFI CTRYAG 2 cut(s) 1197, 1314
BstV1I GCAGC 3 cut(s) 24, 268, 547
BstX2I RGATCY 2 cut(s) 488, 1469
BstYI RGATCY 2 cut(s) 488, 1469
BstZ17I GTATAC 1 cut(s) 196
Bsu15I ATCGAT 1 cut(s) 687
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 5 cut(s) 282, 588, 1134, 1643, 1754
BsuTUI ATCGAT 1 cut(s) 687
BtgI CCRYGG 2 cut(s) 8, 269
BtsCI GGATG 5 cut(s) 469, 811, 875, 1417, 1559
BtsIMutI CAGTG 4 cut(s) 305, 406, 726, 1323
BveI ACCTGC 1 cut(s) 1148
Cac8I GCNNGC 4 cut(s) 178, 375, 429, 1215
CfoI GCGC 1 cut(s) 1409
Cfr10I RCCGGY 1 cut(s) 884
Cfr13I GGNCC 4 cut(s) 161, 281, 1133, 1489
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 4 cut(s) 620, 956, 1156, 1315
Csp6I GTAC 7 cut(s) 318, 438, 496, 546, 870, 979, 1335
CviQI GTAC 7 cut(s) 318, 438, 496, 546, 870, 979, 1335
DdeI CTNAG 7 cut(s) 285, 348, 456, 714, 866, 1027, 1674
DinI GGCGCC 1 cut(s) 1408
DpnI GATC 5 cut(s) 476, 490, 1328, 1471, 1515
DpnII GATC 5 cut(s) 474, 488, 1326, 1469, 1513
DriI GACNNNNNGTC 1 cut(s) 300
EaeI YGGCCR 1 cut(s) 586
Eam1104I CTCTTC 1 cut(s) 462
Eam1105I GACNNNNNGTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 462
Ecl136II GAGCTC 1 cut(s) 176
Eco130I CCWWGG 2 cut(s) 1330, 1384
Eco147I AGGCCT 1 cut(s) 1754
Eco24I GRGCYC 2 cut(s) 178, 840
Eco47I GGWCC 2 cut(s) 161, 1489
Eco53kI GAGCTC 1 cut(s) 176
Eco88I CYCGRG 1 cut(s) 962
EcoICRI GAGCTC 1 cut(s) 176
EcoO109I RGGNCCY 2 cut(s) 1133, 1489
EcoRII CCWGG 6 cut(s) 157, 498, 538, 669, 790, 1585
EcoT14I CCWWGG 2 cut(s) 1330, 1384
EcoT22I ATGCAT 1 cut(s) 1428
EcoT38I GRGCYC 2 cut(s) 178, 840
EgeI GGCGCC 1 cut(s) 1408
EheI GGCGCC 1 cut(s) 1408
ErhI CCWWGG 2 cut(s) 1330, 1384
Esp3I CGTCTC 1 cut(s) 55
FaqI GGGAC 4 cut(s) 970, 1040, 1315, 1402
FauNDI CATATG 2 cut(s) 897, 1623
FblI GTMKAC 2 cut(s) 195, 856
Fnu4HI GCNGC 5 cut(s) 38, 257, 536, 1271, 1644
FokI GGATG 5 cut(s) 476, 818, 862, 1404, 1566
FriOI GRGCYC 2 cut(s) 178, 840
Fsp4HI GCNGC 5 cut(s) 38, 257, 536, 1271, 1644
FspBI CTAG 4 cut(s) 17, 1352, 1454, 1680
GlaI GCGC 1 cut(s) 1408
GluI GCNGC 5 cut(s) 38, 257, 536, 1271, 1644
GsaI CCCAGC 1 cut(s) 1186
GsuI CTGGAG 1 cut(s) 1107
HaeII RGCGCY 1 cut(s) 1410
HaeIII GGCC 5 cut(s) 282, 588, 1134, 1643, 1754
HapII CCGG 5 cut(s) 315, 461, 594, 833, 885
HgaI GACGC 4 cut(s) 620, 956, 1156, 1315
HhaI GCGC 1 cut(s) 1409
Hin1I GRCGYC 2 cut(s) 631, 1407
Hin6I GCGC 1 cut(s) 1407
HinP1I GCGC 1 cut(s) 1407
HincII GTYRAC 2 cut(s) 145, 1323
HindII GTYRAC 2 cut(s) 145, 1323
HindIII AAGCTT 2 cut(s) 1024, 1153
HinfI GANTC 6 cut(s) 13, 527, 553, 1202, 1414, 1730
HpaI GTTAAC 1 cut(s) 145
HpaII CCGG 5 cut(s) 315, 461, 594, 833, 885
HphI GGTGA 3 cut(s) 100, 685, 1000
Hpy166II GTNNAC 8 cut(s) 103, 145, 196, 208, 406, 643, 857, 1323
Hpy188I TCNGA 6 cut(s) 173, 488, 568, 880, 1242, 1469
Hpy188III TCNNGA 5 cut(s) 455, 962, 1057, 1124, 1262
Hpy8I GTNNAC 8 cut(s) 103, 145, 196, 208, 406, 643, 857, 1323
Hpy99I CGWCG 3 cut(s) 636, 950, 1309
HpyAV CCTTC 8 cut(s) 52, 209, 350, 926, 980, 1054, 1480, 1719
HpyCH4III ACNGT 9 cut(s) 193, 300, 364, 410, 564, 730, 1118, 1318, 1369
HpyCH4IV ACGT 3 cut(s) 198, 443, 1449
HpyF10VI GCNNNNNNNGC 3 cut(s) 173, 594, 1140
HpyF3I CTNAG 7 cut(s) 285, 348, 456, 714, 866, 1027, 1674
HpySE526I ACGT 3 cut(s) 198, 443, 1449
Hsp92I GRCGYC 2 cut(s) 631, 1407
HspAI GCGC 1 cut(s) 1407
KasI GGCGCC 1 cut(s) 1406
KpnI GGTACC 2 cut(s) 441, 499
KspAI GTTAAC 1 cut(s) 145
Kzo9I GATC 5 cut(s) 474, 488, 1326, 1469, 1513
LmnI GCTCC 4 cut(s) 617, 746, 955, 1126
Lsp1109I GCAGC 3 cut(s) 24, 268, 547
LweI GCATC 2 cut(s) 559, 679
MaeI CTAG 4 cut(s) 17, 1352, 1454, 1680
MaeII ACGT 3 cut(s) 198, 443, 1449
MaeIII GTNAC 5 cut(s) 292, 383, 784, 1072, 1537
MalI GATC 5 cut(s) 476, 490, 1328, 1471, 1515
MboI GATC 5 cut(s) 474, 488, 1326, 1469, 1513
MboII GAAGA 6 cut(s) 37, 365, 479, 596, 653, 656
MfeI CAATTG 3 cut(s) 306, 341, 708
MflI RGATCY 2 cut(s) 488, 1469
MhlI GDGCHC 5 cut(s) 178, 720, 840, 969, 1123
MlsI TGGCCA 1 cut(s) 588
MluNI TGGCCA 1 cut(s) 588
Mly113I GGCGCC 1 cut(s) 1407
MlyI GAGTC 2 cut(s) 547, 1196
MmeI TCCRAC 3 cut(s) 715, 903, 1217
Mox20I TGGCCA 1 cut(s) 588
Mph1103I ATGCAT 1 cut(s) 1428
MscI TGGCCA 1 cut(s) 588
MseI TTAA 5 cut(s) 144, 201, 1050, 1145, 1344
MslI CAYNNNNRTG 6 cut(s) 78, 243, 900, 980, 1431, 1608
Msp20I TGGCCA 1 cut(s) 588
MspA1I CMGCKG 2 cut(s) 1182, 1673
MspI CCGG 5 cut(s) 315, 461, 594, 833, 885
MspR9I CCNGG 9 cut(s) 159, 315, 500, 540, 594, 671, 792, 834, 1587
MunI CAATTG 3 cut(s) 306, 341, 708
Mva1269I GAATGC 3 cut(s) 682, 823, 907
MvaI CCWGG 6 cut(s) 159, 500, 540, 671, 792, 1587
MwoI GCNNNNNNNGC 3 cut(s) 173, 594, 1140
NarI GGCGCC 1 cut(s) 1407
NciI CCSGG 3 cut(s) 315, 594, 834
NdeI CATATG 2 cut(s) 897, 1623
NdeII GATC 5 cut(s) 474, 488, 1326, 1469, 1513
NlaIV GGNNCC 8 cut(s) 361, 439, 497, 748, 1135, 1408, 1471, 1491
NmuCI GTSAC 2 cut(s) 292, 383
NsiI ATGCAT 1 cut(s) 1428
NspI RCATGY 2 cut(s) 377, 985
PaeI GCATGC 1 cut(s) 377
PaqCI CACCTGC 1 cut(s) 1148
PceI AGGCCT 1 cut(s) 1754
PciI ACATGT 1 cut(s) 981
PctI GAATGC 3 cut(s) 682, 823, 907
PfeI GAWTC 4 cut(s) 13, 527, 1414, 1730
PflMI CCANNNNNTGG 1 cut(s) 1550
PfoI TCCNGGA 1 cut(s) 790
PkrI GCNGC 5 cut(s) 39, 258, 537, 1272, 1645
PleI GAGTC 2 cut(s) 547, 1196
PluTI GGCGCC 1 cut(s) 1410
PpsI GAGTC 2 cut(s) 547, 1196
Ppu21I YACGTR 1 cut(s) 1450
PpuMI RGGWCCY 1 cut(s) 1489
PscI ACATGT 1 cut(s) 981
PsiI TTATAA 2 cut(s) 1284, 1652
Psp124BI GAGCTC 1 cut(s) 178
Psp5II RGGWCCY 1 cut(s) 1489
Psp6I CCWGG 6 cut(s) 157, 498, 538, 669, 790, 1585
PspFI CCCAGC 1 cut(s) 1182
PspGI CCWGG 6 cut(s) 157, 498, 538, 669, 790, 1585
PspN4I GGNNCC 8 cut(s) 361, 439, 497, 748, 1135, 1408, 1471, 1491
PspPI GGNCC 4 cut(s) 161, 281, 1133, 1489
PspPPI RGGWCCY 1 cut(s) 1489
PsrI GAACNNNNNNTAC 2 cut(s) 1097, 1129
PsuI RGATCY 2 cut(s) 488, 1469
PvuII CAGCTG 2 cut(s) 1182, 1673
RsaI GTAC 7 cut(s) 319, 439, 497, 547, 871, 980, 1336
RsaNI GTAC 7 cut(s) 318, 438, 496, 546, 870, 979, 1335
RseI CAYNNNNRTG 6 cut(s) 78, 243, 900, 980, 1431, 1608
SacI GAGCTC 1 cut(s) 178
SaqAI TTAA 5 cut(s) 144, 201, 1050, 1145, 1344
SatI GCNGC 5 cut(s) 38, 257, 536, 1271, 1644
Sau3AI GATC 5 cut(s) 474, 488, 1326, 1469, 1513
Sau96I GGNCC 4 cut(s) 161, 281, 1133, 1489
ScaI AGTACT 1 cut(s) 871
SchI GAGTC 2 cut(s) 547, 1196
ScrFI CCNGG 9 cut(s) 159, 315, 500, 540, 594, 671, 792, 834, 1587
SduI GDGCHC 5 cut(s) 178, 720, 840, 969, 1123
SfaNI GCATC 2 cut(s) 559, 679
SfcI CTRYAG 2 cut(s) 1197, 1314
SfoI GGCGCC 1 cut(s) 1408
SinI GGWCC 2 cut(s) 161, 1489
SmiMI CAYNNNNRTG 6 cut(s) 78, 243, 900, 980, 1431, 1608
SpeI ACTAGT 1 cut(s) 1679
SphI GCATGC 1 cut(s) 377
SseBI AGGCCT 1 cut(s) 1754
SsiI CCGC 2 cut(s) 1271, 1644
SspDI GGCGCC 1 cut(s) 1406
SspMI CTAG 4 cut(s) 17, 1352, 1454, 1680
SstI GAGCTC 1 cut(s) 178
StuI AGGCCT 1 cut(s) 1754
StyD4I CCNGG 9 cut(s) 157, 313, 498, 538, 592, 669, 790, 832, 1585
StyI CCWWGG 2 cut(s) 1330, 1384
TaaI ACNGT 9 cut(s) 193, 300, 364, 410, 564, 730, 1118, 1318, 1369
TaiI ACGT 3 cut(s) 201, 446, 1452
TaqI TCGA 3 cut(s) 687, 891, 1512
TatI WGTACW 2 cut(s) 869, 978
TauI GCSGC 2 cut(s) 1273, 1646
TfiI GAWTC 4 cut(s) 13, 527, 1414, 1730
Tru1I TTAA 5 cut(s) 144, 201, 1050, 1145, 1344
Tru9I TTAA 5 cut(s) 144, 201, 1050, 1145, 1344
TscAI CASTG 4 cut(s) 305, 406, 733, 1323
TseFI GTSAC 2 cut(s) 292, 383
TseI GCWGC 3 cut(s) 37, 256, 535
Tsp45I GTSAC 2 cut(s) 292, 383
TspDTI ATGAA 7 cut(s) 227, 228, 480, 914, 1078, 1118, 1377
TspGWI ACGGA 3 cut(s) 25, 759, 1677
TspRI CASTG 4 cut(s) 305, 406, 733, 1323
Van91I CCANNNNNTGG 1 cut(s) 1550
VpaK11BI GGWCC 2 cut(s) 161, 1489
XapI RAATTY 3 cut(s) 322, 505, 823
XceI RCATGY 2 cut(s) 377, 985
XcmI CCANNNNNNNNNTGG 3 cut(s) 267, 778, 1551
XmiI GTMKAC 2 cut(s) 195, 856
XspI CTAG 4 cut(s) 17, 1352, 1454, 1680
ZrmI AGTACT 1 cut(s) 871
Zsp2I ATGCAT 1 cut(s) 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.