Rorug06G0448400

SNAP25 homologous protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
57852252 .. 57863036
10785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0448400.1

Sequence Viewer

Length: 7527 bp
ATGGACAAGGACAAGAGCCGTACCGATCTGCTCGCTGCCGGCCGTAAAAAGCTTCAACAATTTCGTCAGAAGAAGGATAAAGGCAGTGGAAGCCAGGGAAAATCCACGAAAAAGTCTGGAAAATCAGAGCAGCATGGGGCTGTTGCTGATGCAGTCTCAACTGCAACTAAACCTGCAGCATCCATGAAGTCTGGAAAATCAGAGCAGCATGAGGCTGTTGCTGATGCGGTCTCAACTGCAACTAAACCTACAGCATCGTCTCAGGTCCATGACGGAGAAATTAAGTCTGCTATAGGTTCTAATTCAGGAACTGTCAACACATCAGAGTCAAATTCTGTAGAGAATTCTGCAGACTCTGACACTAGTGTAGCTGTTGCTGGTCCCTCGGCAGTGCTCATTACACAGGAGAAAAGTGTGGTTGAAACCGAATTGGGGGAAAATGCCGAATCGCCATCAGAGGAGGTGGGGGTTAGTAAGCGTGATGCTGACTCTTCTGTTCAGATTGAAGGTGAGAGTACTGGGACTGCTGATGCTGAGGTGGCAAGAGACATTTCATTGGACACTTCACATACAGTGGATTCTGGGGGAGAAGCCAAGAATTCAAAGATGTCTATACAGGTTGATGTATCAGCGCAACATCCTTCAGTTGATATTACAGACGGGATGTCCGTTACTGTTGAATCAGAGATTCCAAGTAGGGAAAAGGAGTCATTGCCTTCAGTGGAAAATATTAATACATCCTTATTGCAGGAGAGGGAAGATCATGTAACAGATGAAGAATTACAGCAGTTAAATGCCTTGTCTCTCCAGCGTGAAAGTGAAATCATTGTTCCAAGGGAAAGTTTAGCTGTTGTTGGTCCCTCGGCAGTGCCAATTACAGAGGAGAAAAGTGTGGTTGAAACCGAATTGGAGAAAAATGCCGAATCGTCATCAGAGGAAGTGGGGGTTAGTAAGCGTGATGCTGACTCTTCTGTTCAGAATGAAGGTGAGAGTACTGGGACTGCTGATGCTGAGATGGCAAGAGACAACTCATTGGGCACTTCACGTACAGTGGATTCTGGAGGAGAAGCCGAAAATTCAAATGTGTCTATACAGGTTGATGAATCGGCCCAACATGCTTCAGTCGATATTACAGAGGGGATGTCCGTCACCGTTGAATCAGAGATTCCGAGTAGAGAAAAGGAGTCAAAGCCTTCACGGGAAAATATTAATACATCCTTAATGCAGGAGAGGGAAGATCAGGAAGAAGTACAGCAGTTAAATGCCTTGTCTCTCCAGCCTTGTCTCTCAACTGCAACTAAACCTACAGCATCGTCTCGGGTCTGTGATGGAGAAATTAAGTCTGTTGTAGGTTCTAATTCAGGAATTGTCAACACATCAGAGTCAAATTCTGTAGAGAATTCTGCAGACTCTGACACTAGTGTAGCTGTTGCTGGTCCCTCAGCAGTGCCCATTACACAGGAGAAAAGTGTGGTTGAAACTGAATTGGAGAAAAATGCCGAATCACCATCAGAGGAAGTGGGGGTTAGTAAGCGTGATGCTGACTCCTCTGTTCAGAATGAAGGTGAGAGTACTGGGACTGCTGATGCTGAGGTGGCAAGAGGCATTTCATTGGACACTTCACATACAGTGGATTCTGGAGGAGAAGCCAAGAATTCAAAGATGTCTATACAGGTTGATGTATCAGCGCAACATGCTTCTGATAATATTACAGAGGGGATGTCCGTTATTGTTGAATCAGAGATTCCACGTAGTGAAGAGGAGTCATTGCCTTCACAGGACAATATTAATACATCCTTAATGCAGGATAGGGAAGATCAGGAAGAAGTACAGCAGTTAAATTCCTTGTCTCTGGGGAATGCTGATGCCACCTCTGGGGAATTGAAACATCAGAATGAGGCCTTAGAAGAATATAGCAAGAAACTGGAAGCAACAAACATTGAGCTCAGGGTCCTATATGAAGCTTTAGAAGAACATAGGGGAAGCATTGAATCTAGGAACTGTGAGCTTTCGATTCTCTGCGAATCCTTACAACTAGAAGTCACTAATCTTAAAGTAGAAAACGTGGAAGTTGACAGAAAACTACATGCGTATGAGGCCACCTCTGGGGAGTTGAAGGATCAGAATGAGGCCTTAGAAGAATATAGTAAGAAACTGGAAGCAACGAATATTGAGCTCAGGGTCCTATATGAAGCTTTAGAAGAACATAGGGGAAGGATTGAATCTAGGAACTGTGAGCTTTCGATTCTCTGCGAATCCTTACAACTAGAAGTCACTAATCTTAAAGTAGAAAACGTGGAAGTTGACAGAAAGCTACATGTGTATGAATCAAGAACTAGTAAATTGCAGAGTCAATTGCATGATCTACATCTAATTTCAAATGTTATGGTATCTCAGATCTCTGAGCAGTTGGAAAATTTTTACAAGGAAGCAGCTGAGAAAGTTTTGATACTTGAGCGCCATTGGAATTCAACTATTGATCCGGTTCTTGAAGCAACTGGGAAGCTTGATGAATCTCTTGGTAGGGTCAACATGACTACAGCAGTCTCTCATGATTCTTTGGACAGAATTAGCTATTCTGTTGCTTCTGTTTATGATGCCATCAGTTTTATTCAAGATCTGAAGGACAAACTTGAAAGTTCTCAAACAGAACATGAAGCAGTCTTTACTTTATACAAAGAAGCGAATGAGAAATGTGATGATCTGCATGGAAAGAATCAAATGGCCAGTGATTTGTTGCAGAAGTTGTATGGCGACCTTTCTAAACTTCTCACGGTTTTGCATGGGTCTACAGATGAAAGTGATATGTACTTGGAACCTGAGAAGCTTCCTGATCCTCTAGATTACAGTAATTATGAGATCATCATAGAACATGTGGAATCTTTTTTGAGGGGGAGTCTGCAACTTGAATCTGTTAACAAGAAACTAAATTCAGAGTTGATGGCTAGCGCTGAAGAAGTTGAGGAACTGAAACAAAGATGCCTTGATTCTAATGTTCTGCAGAAGTTAATAGAAAATGTTGAAGGGGTGCTGAAAGTGGAACATGCTGAGTTTCAATTGGATAAAACGCCTGCTTCACGTCTTGAATCACTGGTGTCATGTCTTGTTCGGAAATGCGAGGAGGCTGACGTGCAGCTAAGCTTATCTAAGGAAGATTCTGGATCTAAGGTGGTGGAGCTGACTTTAATGCAGGAAGAAGTACAGCAGTTAAATGCCTTGTCTCTCCAGCATGAAAGTGAACTCATTGTTCTAAGGGAAAGTTTACATCAGGTGGAGGAAGCACTTCTTGTTGCTCGTTCTGAGATAGAAGGGAAAGTAAATGAACTTGAACAGTCAGAGCAACGGGTGTCTTCCCTTAGAGAGAAGCTTACCATTGCTGTCACCAAGGGGAAAGGTTTGATTGTGCAGCGAGATGGTCTGAAGCAGTCCCTTAACGAGAAATCTGTTGAACTGGAAAGATTCTCACAGGAACTGCAAATGAAAGATGCAAGGCTTCTTGAGATTGAAACAAAACTTAAGGCATATTCAGAGTCAGGTGAGCGGGTGGAAGCTCTGGAATCTGAGCTTTCATATATTCGCAATTCGGCTACTGCATTAAGAGAATCATTCCTTCTCAAAGATTCTGTCCTTCAGAGAATAGAAGAGATCTTGGAAGACCTTGATCTGCCAGAGCATTTTCATTCAAGAGATATTATTGAGAAGATTGATTGGCTGGCTAGGACAGCTACCAGTAACACTTTTCCTGTGACTGATTCAGATCAGAGGAGTTCTGCCGGTGGAGTTTCGTACTCTGATGCTGGTTTTGTTGTTATGGATTCCTGGAAAGATGATGTACAACCAAGTTCAAATTCAAGTGAGGATATCAAAAGAAAATATGACGAACTTCAGAGTAAATTTTATGGGTTGGCTGAACAGAATGAAATGTTGGAACAATCTTTAATGGAAAGGAACAACATAGTACAGAGATGGGAGGAAATTTTGGACAGAATCGACATGCCATCACATCTGCGATCTGTGGAGCCAGAGGATAGGATCGATTGGTTAAGTAAAGCACTTTCAGAAGTGCAGGAAGACAATATGTCTCTCCAGCAGAAGGTTGTTAACCTTGAAAACCATTGTGTATCACTAACTGCTGATTTGGAAGACTCGCAAAGGAGAGTGTCTGACCTTGAGGCAGACCTTCAAACATTTGTCCATGAGAGAGATCATCTTTCTGAAAGATTGGAGACTCTGGTCAATGATCAGGAGAAGCTTTCAACAAAGGCAGTTGAATTTGAGCTTGAGAATGAAAAGCTGCAGAAGGAAGTCACTGATTTGCAAGAAAATGTAGCCAAGATGCATGGAAATGAGAATCAAATTCTCAGCATAGAAGCTGACTTAAGAAGATTACAGAGTTTGGTTACTGATGCCTTGGAGGTCTCTGGATCAAAGTATGAGTACTCCGGTGATAGTAGCATTGAGTGCTTGGAAGGGTTACTGAATAAGCTTTTAGAGAGTTATGCAACTCTTTCCTCAGGAAAACCTGTGCATGGGGGTGCAGCTGAAGGTCTCCATACTGAATATACTGATGCAACAGTTGTTGGATCAAGAAGCCTAAATATACTTGATTCCCAGGAATCAGATATAGATGTTTTGAAGAAAGAGTTGGAGGATGTTCAACATGAACTTTTAAATGTGAAGGAGGAGAGGGATGGATATCTAGAGAAGCAACAGTCTATGGCTAGTGAATTTGAAGCATTACATAACAAAGTGAATGAGTTGCAAGGGCTTCTTAATCAAGAGGAGAAGAAGTCAGCTTCTGTTAGAGAGAAGTTAAATGTTGCAGTCAGAAAAGGGAAGTCTTTGGTACAACAGCGTGACAGTCTGAAACAATGTATTGATGAGGTCAACTCTGAGGTGGAACGTTTGAGATCAGAGATCAAGACGGGGGAAGTTAAAATTGCAGAGTATGAACAAAACTTCAGGGATTTGTCTACTTACCCTGGTAGGGTAGAAGCCTTAGAATCTGAGACATTGTTCTTGAGGAATTGTTTGAATGAAACTGAGCAGAATTTGCAGCAGAAAGCAAATACTTTGAGCATGATTGTAAATATCTTAGACAACATTGATGTAGGAGGCAATTTCAATTCTCGTGATCCAGTTGTGAAGTTGGAACAAATTGGGAAAATGTGCTTTGATTTACGCACAGATGTAGCTTCTTCTGAGCAAGAGACTAGGAAATCCAAAAGAGCAGCAGAGCTACTCCTTGCAGAACTGAATGAGGTTCAAGAGAGGAATGACGGTCTCCAGGAAGAGCTAGCAAAATCTGCTGATGAAATTTCTATACTCTCCAAGGAAAGGGATCTTGCTGAGGCTGGCAAGCTTGAAGCTGTTTTAAGTCTTGAAAAGTTATCTACTGCTCACTCCGAGGAAAGAAACCAATTTTCTGAATTTGCAGGACTGAAATCTGGTGTAGATCAACTCAGGAAGGGTTTCCATGATATTAGCAATTCATTGGCTGGTCTTTTTTACAATGACTTGGAATTTTTGAAAAACTTGGAGTCTGGTATTGACTCATGTCTCAACTTGAATAGTGCTAATGTGGTTGATGTGCACCCCTTCACTGCAGCTGGTGGATTTCTATTGAGCAAATCAGATAAGGTTAACTCTATTTCAATTAATTCTTGGTCAGACCCCGAGACGCATGGACATTTTGGTGACAGTTTTGCCATCGAAACCTTTACATACATAACACATTATGTGCAAGAGCTCATGACGGAGATTGGTGTGCTTAAAGAAAAATTAGATGAACACTCAATGTCTTTGCATGAAAAATCTAGCAGTGTATCCAGATTGGTGGCAATTGTTCGTGGAGAGATAAGTTCCAAAAATGAGTCGTTTGAAGCCTTGAGGAGAGACTTTTTGCAGATGGAAATGGTCAAAAAGGAAAAGGACAAGGAACTTCTTGTCTTGCATAGAAATGCTGCCTTGCTTTTTGAAGCATGCACTAGTTCTGTTGTGGAAATAAATAGAAGAAAAGCTGAATTGGTGGGAAATAGTTGGGTTGTTGGAGATCTGGGAATGACATCAAAAACAGCAGAATTGCCCGCTTTCAGGGGAGAGGGTGAGCTGTACTCTGAGGAATCTGTTAGGTCTGTGGCAGACAGGCTTTTGTCGGCTGCTAGTGATTTTGCTACTCTGACAGCTGAAATAGTTGAAGGCAGCCAAAAGGAAATGAAGCTTACCATTTCAAATTTGCAGAAAGAGCTTCAGGAGAAGGACGTTCAAAAGGAGAGGATTTTCATGGAGCTTGTAAGTCAAATCAAGGAGGCTGAAGCTACTACAAGCAGCTATTCAGTGGACCTTGAATCTTCAAAAACCTTGGTGCATGATTTGGAGAAACAGTTGGAAGCGATGAAAGGTGAACGCAACCTACTTGAGCAGAGAGTAAAGGAGCTAGAAGATGGCCATGCCTCCTCTGACGAGTTACAACAGAGGGTCAGATCACTAACGGATGTGCTTGCTGCCAAAGACCATGAAATTGAGGAGCTAATCCAAGCACTTGATGAGGAGGAGGTACAGATGCAAGGTATCACCTTCAAGATCAAGGAACTGGAAAAGATCGTTGAACAAAAAAACCTAGATTTAGAGAACCTTGAAGCTTCTCGTGGCAAGGTGATGAAAAAGCTCTTCGTCACTGTGAATAAGTTTGACGAGCTGCATCATCTATCTGCAAGCCTCCTTGCGGAAGTTGAAGAACTGCAGTCACAGTTGCAAGATCGGGATGCAGAGATTTCTTTCTTAAGGCAAGAGGTCACTAGGTGCACCAATGATGTTCTGGTTGCATCACAAGTCAGTAAGAAGGGAAATTCAGATGAGATCCACGAGTTATTAACATGGTTTGATATGAATGTTGCTCGATTTGGGGTGCACAGTCAGTATGTTGAAGATAAGAACAACAGTGACATCGCTGAACAAATGGAAGTACTCAAGAAGACAGTTGATTCTATTTTATCAGAATTGGGGGATCTACGGGCTGCTGCTCAAAGCAGAGATATATTGTTGCAAGAAGAAAGGACTAAGGTAGAAGAATTAACACGCAAGGGTCAGACTCTTGAGAAGTGTTTGCGGGAGAAGGAATCACAATTAAATCTGCTTGAAGGTGTGGAAGATGGCCAGGCAACTAGCTTGACCTCGGAGATTCATGAAGTTGAGCCTGCGATAAACAAATGGGCAGCATCTGGTTCCTCCCTTGCATCGCAAGTCCGCAGTTTGCGCAAAGGCAATAGTGAGCAAGTTGCAATTGCCATAGATATGGATCCTGGGAGCACTAGTAGATTGGAAGATGAAGAAGATGATAAGGTTCATGGTTTCAAGTCGCTCACTACATCAAGAATGGTTCCTAGATTTACAAGACCTCTGACTGACATGGTTGATGGCCTCTGGGTTACTTGTGATCGGACTTTAATGCGACAACCAATTTTGCGGCTTGGTATCATATTCTATTGGGCTTTTCTGCATACGCTTCTTGCTAGTCTTGCAATTTGA

Protein Analysis

2508

Amino Acids

278.87

Weight (kDa)

4.66

Isoelectric Point (pI)

48.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 7256
Acc36I ACCTGC 1 cut(s) 181
AccBSI CCGCTC 1 cut(s) 3541
AccI GTMKAC 2 cut(s) 2789, 4973
AciI CCGC 7 cut(s) 227, 3541, 6087, 6725, 7108, 7246, 7465
AclI AACGTT 1 cut(s) 4903
AcoI YGGCCR 4 cut(s) 40, 2724, 6445, 7153
AdeI CACNNNGTG 2 cut(s) 1754, 6801
AfeI AGCGCT 1 cut(s) 2950
AfiI CCNNNNNNNGG 9 cut(s) 432, 1875, 2106, 4093, 4529, 4987, 5337, 6093, 6724
AflII CTTAAG 3 cut(s) 3515, 4378, 6781
AflIII ACRYGT 2 cut(s) 2317, 2872
AhdI GACNNNNNGTC 2 cut(s) 664, 4078
AhlI ACTAGT 5 cut(s) 362, 1418, 2336, 5987, 7310
AjiI CACGTC 2 cut(s) 3080, 3130
AjnI CCWGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
AjuI GAANNNNNNNTTGG 6 cut(s) 3832, 3864, 3908, 3940, 4628, 4660
Alw21I GWGCWC 8 cut(s) 396, 1947, 2178, 5595, 5751, 6806, 6912, 7310
Alw44I GTGCAC 3 cut(s) 5591, 6802, 6908
AlwNI CAGNNNCTG 6 cut(s) 311, 356, 1412, 3472, 4799, 7220
Ama87I CYCGRG 2 cut(s) 1317, 5675
Aor51HI AGCGCT 1 cut(s) 2950
AoxI GGCC 9 cut(s) 40, 1107, 1899, 2097, 2130, 2724, 6445, 7153, 7417
ApaLI GTGCAC 3 cut(s) 5591, 6802, 6908
ArsI GACNNNNNNTTYG 2 cut(s) 3609, 3641
AseI ATTAAT 4 cut(s) 732, 1209, 1788, 5658
Asp700I GAANNNNTTC 2 cut(s) 3282, 5471
AspLEI GCGC 5 cut(s) 634, 1690, 2460, 2951, 7257
AspS9I GGNCC 8 cut(s) 265, 380, 857, 1108, 1436, 1951, 2182, 6340
AsuNHI GCTAGC 2 cut(s) 2945, 5296
AvaI CYCGRG 2 cut(s) 1317, 5675
AvaII GGWCC 7 cut(s) 265, 380, 857, 1436, 1951, 2182, 6340
AxyI CCTNAGG 1 cut(s) 4513
BaeGI GKGCMC 5 cut(s) 1040, 1452, 5595, 6806, 6912
BalI TGGCCA 3 cut(s) 2726, 6447, 7155
BamHI GGATCC 1 cut(s) 7297
BanII GRGCYC 3 cut(s) 1947, 2178, 5751
BauI CACGAG 3 cut(s) 5130, 6645, 6863
BbsI GAAGAC 5 cut(s) 3342, 3660, 4077, 4149, 6980
Bbv12I GWGCWC 8 cut(s) 396, 1947, 2178, 5595, 5751, 6806, 6912, 7310
BbvCI CCTCAGC 4 cut(s) 534, 1441, 1590, 5349
BceAI ACGGC 2 cut(s) 3, 27
BciT130I CCWGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
BciVI GTATCC 1 cut(s) 5836
BclI TGATCA 1 cut(s) 4240
BcuI ACTAGT 5 cut(s) 362, 1418, 2336, 5987, 7310
BfoI RGCGCY 2 cut(s) 2461, 2952
BfrI CTTAAG 3 cut(s) 3515, 4378, 6781
BfuAI ACCTGC 1 cut(s) 181
BfuI GTATCC 1 cut(s) 5836
BglII AGATCT 4 cut(s) 2397, 2617, 3645, 6052
BlpI GCTNAGC 1 cut(s) 3137
BmcAI AGTACT 5 cut(s) 517, 994, 1573, 4439, 6966
Bme1390I CCNGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
Bme18I GGWCC 7 cut(s) 265, 380, 857, 1436, 1951, 2182, 6340
BmeRI GACNNNNNGTC 2 cut(s) 664, 4078
BmeT110I CYCGRG 2 cut(s) 1317, 5675
BmgBI CACGTC 2 cut(s) 3080, 3130
BmgT120I GGNCC 8 cut(s) 265, 380, 857, 1108, 1436, 1951, 2182, 6340
BmrFI CCNGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
BmrI ACTGGG 4 cut(s) 528, 1005, 1584, 2508
BmtI GCTAGC 2 cut(s) 2949, 5300
BmuI ACTGGG 4 cut(s) 528, 1005, 1584, 2508
BoxI GACNNNNGTC 2 cut(s) 4232, 5556
BpiI GAAGAC 5 cut(s) 3342, 3660, 4077, 4149, 6980
BplI GAGNNNNNCTC 6 cut(s) 2087, 2119, 4874, 4906, 6098, 6130
BpmI CTGGAG 7 cut(s) 791, 1080, 1259, 1659, 3209, 4070, 5270
Bpu10I CCTNAGC 6 cut(s) 534, 1441, 1590, 1946, 2177, 5349
Bpu1102I GCTNAGC 1 cut(s) 3137
BpuEI CTTGAG 9 cut(s) 2474, 3518, 4190, 4301, 5041, 5908, 6437, 6953, 7115
Bsa29I ATCGAT 1 cut(s) 4035
BsaAI YACGTR 2 cut(s) 1046, 1751
BsaBI GATNNNNATC 4 cut(s) 2367, 3756, 4695, 7296
BsaI GGTCTC 4 cut(s) 235, 4423, 4553, 5288
BsaWI WCCGGW 2 cut(s) 2482, 4442
BsaXI ACNNNNNCTCC 6 cut(s) 4775, 4805, 6368, 6398, 7297, 7327
Bsc4I CCNNNNNNNGG 9 cut(s) 432, 1875, 2106, 4093, 4529, 4987, 5337, 6093, 6724
Bse118I RCCGGY 2 cut(s) 38, 3773
Bse21I CCTNAGG 1 cut(s) 4513
Bse3DI GCAATG 3 cut(s) 710, 1766, 3372
Bse8I GATNNNNATC 4 cut(s) 2367, 3756, 4695, 7296
BseBI CCWGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
BseCI ATCGAT 1 cut(s) 4035
BseJI GATNNNNATC 4 cut(s) 2367, 3756, 4695, 7296
BseLI CCNNNNNNNGG 9 cut(s) 432, 1875, 2106, 4093, 4529, 4987, 5337, 6093, 6724
BseMI GCAATG 3 cut(s) 710, 1766, 3372
BseSI GKGCMC 5 cut(s) 1040, 1452, 5595, 6806, 6912
BseX3I CGGCCG 1 cut(s) 40
BsgI GTGCAG 4 cut(s) 3152, 3425, 4085, 4557
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 9 cut(s) 42, 1109, 1901, 2099, 2132, 2726, 6447, 7155, 7419
BshVI ATCGAT 1 cut(s) 4035
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 8 cut(s) 396, 1947, 2178, 5595, 5751, 6806, 6912, 7310
BsiHKCI CYCGRG 2 cut(s) 1317, 5675
BsiSI CCGG 4 cut(s) 39, 2483, 3774, 4443
BslFI GGGAC 7 cut(s) 366, 535, 843, 1012, 1422, 1591, 3412
BslI CCNNNNNNNGG 9 cut(s) 432, 1875, 2106, 4093, 4529, 4987, 5337, 6093, 6724
BsmBI CGTCTC 3 cut(s) 264, 1320, 5672
BsmFI GGGAC 7 cut(s) 366, 535, 843, 1012, 1422, 1591, 3412
BsmI GAATGC 1 cut(s) 1864
BsnI GGCC 9 cut(s) 42, 1109, 1901, 2099, 2132, 2726, 6447, 7155, 7419
Bso31I GGTCTC 4 cut(s) 235, 4423, 4553, 5288
BsoBI CYCGRG 2 cut(s) 1317, 5675
Bsp1407I TGTACA 1 cut(s) 3832
Bsp1720I GCTNAGC 1 cut(s) 3137
BspACI CCGC 7 cut(s) 227, 3541, 6087, 6725, 7108, 7246, 7465
BspANI GGCC 9 cut(s) 42, 1109, 1901, 2099, 2132, 2726, 6447, 7155, 7419
BspDI ATCGAT 1 cut(s) 4035
BspHI TCATGA 3 cut(s) 2551, 5751, 7183
BspMAI CTGCAG 7 cut(s) 178, 352, 1408, 3003, 4299, 5608, 6744
BspMI ACCTGC 1 cut(s) 181
BspOI GCTAGC 2 cut(s) 2949, 5300
BspQI GCTCTTC 2 cut(s) 5286, 6674
BspTI CTTAAG 3 cut(s) 3515, 4378, 6781
BspTNI GGTCTC 4 cut(s) 235, 4423, 4553, 5288
BsrBI CCGCTC 1 cut(s) 3541
BsrDI GCAATG 3 cut(s) 710, 1766, 3372
BsrFI RCCGGY 2 cut(s) 38, 3773
BsrGI TGTACA 1 cut(s) 3832
BssAI RCCGGY 2 cut(s) 38, 3773
BssSI CACGAG 3 cut(s) 5130, 6645, 6863
BssT1I CCWWGG 5 cut(s) 833, 3384, 4410, 5331, 6360
Bst2BI CACGAG 3 cut(s) 5130, 6645, 6863
Bst2UI CCWGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
Bst6I CTCTTC 6 cut(s) 496, 973, 1752, 3636, 5286, 6674
BstAFI CTTAAG 3 cut(s) 3515, 4378, 6781
BstAPI GCANNNNNTGC 3 cut(s) 4461, 5053, 5306
BstAUI TGTACA 1 cut(s) 3832
BstBAI YACGTR 2 cut(s) 1046, 1751
BstH2I RGCGCY 2 cut(s) 2461, 2952
BstHHI GCGC 5 cut(s) 634, 1690, 2460, 2951, 7257
BstMCI CGRYCG 1 cut(s) 43
BstNI CCWGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
BstNSI RCATGY 8 cut(s) 1118, 1697, 2090, 2321, 2876, 3047, 3997, 5985
BstPAI GACNNNNGTC 2 cut(s) 4232, 5556
BstSCI CCNGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
BstSLI GKGCMC 5 cut(s) 1040, 1452, 5595, 6806, 6912
BstV2I GAAGAC 5 cut(s) 3342, 3660, 4077, 4149, 6980
BstX2I RGATCY 9 cut(s) 2397, 2617, 3161, 3645, 5341, 6052, 6858, 7006, 7297
BstXI CCANNNNNNTGG 2 cut(s) 5836, 7294
BstYI RGATCY 9 cut(s) 2397, 2617, 3161, 3645, 5341, 6052, 6858, 7006, 7297
BstZI CGGCCG 1 cut(s) 40
Bsu15I ATCGAT 1 cut(s) 4035
Bsu36I CCTNAGG 1 cut(s) 4513
BsuI GTATCC 1 cut(s) 5836
BsuRI GGCC 9 cut(s) 42, 1109, 1901, 2099, 2132, 2726, 6447, 7155, 7419
BsuTUI ATCGAT 1 cut(s) 4035
BtgZI GCGATG 3 cut(s) 6407, 6931, 7221
BtrI CACGTC 2 cut(s) 3080, 3130
BtsI GCAGTG 6 cut(s) 91, 396, 873, 1452, 5601, 5827
BveI ACCTGC 1 cut(s) 181
CaiI CAGNNNCTG 6 cut(s) 311, 356, 1412, 3472, 4799, 7220
CciI TCATGA 3 cut(s) 2551, 5751, 7183
CfoI GCGC 5 cut(s) 634, 1690, 2460, 2951, 7257
Cfr10I RCCGGY 2 cut(s) 38, 3773
Cfr13I GGNCC 8 cut(s) 265, 380, 857, 1108, 1436, 1951, 2182, 6340
ClaI ATCGAT 1 cut(s) 4035
CseI GACGC 1 cut(s) 5689
DraI TTTAAA 1 cut(s) 4671
DraIII CACNNNGTG 2 cut(s) 1754, 6801
DriI GACNNNNNGTC 2 cut(s) 664, 4078
EaeI YGGCCR 4 cut(s) 40, 2724, 6445, 7153
EagI CGGCCG 1 cut(s) 40
Eam1104I CTCTTC 6 cut(s) 496, 973, 1752, 3636, 5286, 6674
Eam1105I GACNNNNNGTC 2 cut(s) 664, 4078
EarI CTCTTC 6 cut(s) 496, 973, 1752, 3636, 5286, 6674
Ecl136II GAGCTC 3 cut(s) 1945, 2176, 5749
EclXI CGGCCG 1 cut(s) 40
Eco130I CCWWGG 5 cut(s) 833, 3384, 4410, 5331, 6360
Eco147I AGGCCT 2 cut(s) 1901, 2132
Eco24I GRGCYC 3 cut(s) 1947, 2178, 5751
Eco31I GGTCTC 4 cut(s) 235, 4423, 4553, 5288
Eco32I GATATC 2 cut(s) 3862, 4697
Eco47I GGWCC 7 cut(s) 265, 380, 857, 1436, 1951, 2182, 6340
Eco47III AGCGCT 1 cut(s) 2950
Eco52I CGGCCG 1 cut(s) 40
Eco53kI GAGCTC 3 cut(s) 1945, 2176, 5749
Eco81I CCTNAGG 1 cut(s) 4513
Eco88I CYCGRG 2 cut(s) 1317, 5675
EcoICRI GAGCTC 3 cut(s) 1945, 2176, 5749
EcoO109I RGGNCCY 2 cut(s) 1951, 2182
EcoRI GAATTC 5 cut(s) 343, 598, 1399, 1654, 2467
EcoRII CCWGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
EcoRV GATATC 2 cut(s) 3862, 4697
EcoT14I CCWWGG 5 cut(s) 833, 3384, 4410, 5331, 6360
EcoT22I ATGCAT 1 cut(s) 4341
EcoT38I GRGCYC 3 cut(s) 1947, 2178, 5751
ErhI CCWWGG 5 cut(s) 833, 3384, 4410, 5331, 6360
Esp3I CGTCTC 3 cut(s) 264, 1320, 5672
FalI AAGNNNNNCTT 4 cut(s) 3270, 3302, 4755, 4787
FaqI GGGAC 7 cut(s) 366, 535, 843, 1012, 1422, 1591, 3412
FauI CCCGC 3 cut(s) 3534, 6094, 7101
FbaI TGATCA 1 cut(s) 4240
FblI GTMKAC 2 cut(s) 2789, 4973
FriOI GRGCYC 3 cut(s) 1947, 2178, 5751
FspI TGCGCA 1 cut(s) 7256
GlaI GCGC 5 cut(s) 633, 1689, 2459, 2950, 7256
GsuI CTGGAG 7 cut(s) 791, 1080, 1259, 1659, 3209, 4070, 5270
HaeII RGCGCY 2 cut(s) 2461, 2952
HaeIII GGCC 9 cut(s) 42, 1109, 1901, 2099, 2132, 2726, 6447, 7155, 7419
HapII CCGG 4 cut(s) 39, 2483, 3774, 4443
HgaI GACGC 1 cut(s) 5689
HhaI GCGC 5 cut(s) 634, 1690, 2460, 2951, 7257
Hin6I GCGC 5 cut(s) 632, 1688, 2458, 2949, 7255
HinP1I GCGC 5 cut(s) 632, 1688, 2458, 2949, 7255
HincII GTYRAC 9 cut(s) 316, 1372, 2074, 2305, 2530, 2917, 4102, 4888, 5644
HindII GTYRAC 9 cut(s) 316, 1372, 2074, 2305, 2530, 2917, 4102, 4888, 5644
HpaI GTTAAC 3 cut(s) 2917, 4102, 5644
HpaII CCGG 4 cut(s) 39, 2483, 3774, 4443
HpyCH4IV ACGT 8 cut(s) 1045, 1750, 2064, 2295, 3079, 3129, 4903, 6261
HpySE526I ACGT 8 cut(s) 1045, 1750, 2064, 2295, 3079, 3129, 4903, 6261
HspAI GCGC 5 cut(s) 632, 1688, 2458, 2949, 7255
KroI GCCGGC 1 cut(s) 38
KroNI GCCGGC 1 cut(s) 40
Ksp22I TGATCA 1 cut(s) 4240
KspAI GTTAAC 3 cut(s) 2917, 4102, 5644
LguI GCTCTTC 2 cut(s) 5286, 6674
LmnI GCTCC 6 cut(s) 3175, 4018, 6286, 6433, 6526, 7305
MaeII ACGT 8 cut(s) 1045, 1750, 2064, 2295, 3079, 3129, 4903, 6261
MbiI CCGCTC 1 cut(s) 3541
MfeI CAATTG 4 cut(s) 2354, 3056, 5841, 7281
MflI RGATCY 9 cut(s) 2397, 2617, 3161, 3645, 5341, 6052, 6858, 7006, 7297
MlsI TGGCCA 3 cut(s) 2726, 6447, 7155
MluNI TGGCCA 3 cut(s) 2726, 6447, 7155
MmeI TCCRAC 7 cut(s) 2391, 3906, 4561, 4626, 5130, 6028, 6366
Mox20I TGGCCA 3 cut(s) 2726, 6447, 7155
Mph1103I ATGCAT 1 cut(s) 4341
MroNI GCCGGC 1 cut(s) 38
MroXI GAANNNNTTC 2 cut(s) 3282, 5471
MscI TGGCCA 3 cut(s) 2726, 6447, 7155
MslI CAYNNNNRTG 9 cut(s) 1893, 2091, 2322, 3234, 4344, 4533, 5694, 5958, 7292
Msp20I TGGCCA 3 cut(s) 2726, 6447, 7155
MspA1I CMGCKG 4 cut(s) 2435, 4541, 5609, 6185
MspCI CTTAAG 3 cut(s) 3515, 4378, 6781
MspI CCGG 4 cut(s) 39, 2483, 3774, 4443
MspR9I CCNGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
MunI CAATTG 4 cut(s) 2354, 3056, 5841, 7281
Mva1269I GAATGC 1 cut(s) 1864
MvaI CCWGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
NaeI GCCGGC 1 cut(s) 40
NgoMIV GCCGGC 1 cut(s) 38
NheI GCTAGC 2 cut(s) 2945, 5296
NmeAIII GCCGAG 2 cut(s) 365, 842
NsbI TGCGCA 1 cut(s) 7256
NsiI ATGCAT 1 cut(s) 4341
NspI RCATGY 8 cut(s) 1118, 1697, 2090, 2321, 2876, 3047, 3997, 5985
PaeI GCATGC 1 cut(s) 5985
PagI TCATGA 3 cut(s) 2551, 5751, 7183
PceI AGGCCT 2 cut(s) 1901, 2132
PciI ACATGT 2 cut(s) 2317, 2872
PciSI GCTCTTC 2 cut(s) 5286, 6674
PcsI WCGNNNNNNNCGW 1 cut(s) 666
PctI GAATGC 1 cut(s) 1864
PdiI GCCGGC 1 cut(s) 40
PdmI GAANNNNTTC 2 cut(s) 3282, 5471
PfoI TCCNGGA 2 cut(s) 3818, 5286
Ppu21I YACGTR 2 cut(s) 1046, 1751
PpuMI RGGWCCY 2 cut(s) 1951, 2182
PscI ACATGT 2 cut(s) 2317, 2872
PshAI GACNNNNGTC 2 cut(s) 4232, 5556
PshBI ATTAAT 4 cut(s) 732, 1209, 1788, 5658
Psp124BI GAGCTC 3 cut(s) 1947, 2178, 5751
Psp1406I AACGTT 1 cut(s) 4903
Psp5II RGGWCCY 2 cut(s) 1951, 2182
Psp6I CCWGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
PspGI CCWGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
PspPI GGNCC 8 cut(s) 265, 380, 857, 1108, 1436, 1951, 2182, 6340
PspPPI RGGWCCY 2 cut(s) 1951, 2182
PsrI GAACNNNNNNTAC 2 cut(s) 6396, 6428
PstI CTGCAG 7 cut(s) 178, 352, 1408, 3003, 4299, 5608, 6744
PstNI CAGNNNCTG 6 cut(s) 311, 356, 1412, 3472, 4799, 7220
PsuI RGATCY 9 cut(s) 2397, 2617, 3161, 3645, 5341, 6052, 6858, 7006, 7297
PvuII CAGCTG 4 cut(s) 2435, 4541, 5609, 6185
RseI CAYNNNNRTG 9 cut(s) 1893, 2091, 2322, 3234, 4344, 4533, 5694, 5958, 7292
SacI GAGCTC 3 cut(s) 1947, 2178, 5751
SapI GCTCTTC 2 cut(s) 5286, 6674
Sau96I GGNCC 8 cut(s) 265, 380, 857, 1108, 1436, 1951, 2182, 6340
ScaI AGTACT 5 cut(s) 517, 994, 1573, 4439, 6966
ScrFI CCNGG 7 cut(s) 95, 3820, 4613, 4983, 5288, 7157, 7302
SinI GGWCC 7 cut(s) 265, 380, 857, 1436, 1951, 2182, 6340
SmiMI CAYNNNNRTG 9 cut(s) 1893, 2091, 2322, 3234, 4344, 4533, 5694, 5958, 7292
SpeI ACTAGT 5 cut(s) 362, 1418, 2336, 5987, 7310
SphI GCATGC 1 cut(s) 5985
SseBI AGGCCT 2 cut(s) 1901, 2132
SsiI CCGC 7 cut(s) 227, 3541, 6087, 6725, 7108, 7246, 7465
SspI AATATT 5 cut(s) 730, 1207, 1708, 1786, 2170
SstI GAGCTC 3 cut(s) 1947, 2178, 5751
StuI AGGCCT 2 cut(s) 1901, 2132
StyD4I CCNGG 7 cut(s) 93, 3818, 4611, 4981, 5286, 7155, 7300
StyI CCWWGG 5 cut(s) 833, 3384, 4410, 5331, 6360
TaiI ACGT 8 cut(s) 1048, 1753, 2067, 2298, 3082, 3132, 4906, 6264
TaqI TCGA 7 cut(s) 1125, 2012, 2243, 3990, 4035, 5712, 6898
TauI GCSGC 1 cut(s) 7468
TspGWI ACGGA 6 cut(s) 288, 658, 1135, 1714, 5771, 6506
Vha464I CTTAAG 3 cut(s) 3515, 4378, 6781
VneI GTGCAC 3 cut(s) 5591, 6802, 6908
VpaK11BI GGWCC 7 cut(s) 265, 380, 857, 1436, 1951, 2182, 6340
VspI ATTAAT 4 cut(s) 732, 1209, 1788, 5658
XbaI TCTAGA 2 cut(s) 2839, 4699
XceI RCATGY 8 cut(s) 1118, 1697, 2090, 2321, 2876, 3047, 3997, 5985
XcmI CCANNNNNNNNNTGG 1 cut(s) 6814
XmiI GTMKAC 2 cut(s) 2789, 4973
XmnI GAANNNNTTC 2 cut(s) 3282, 5471
ZrmI AGTACT 5 cut(s) 517, 994, 1573, 4439, 6966
Zsp2I ATGCAT 1 cut(s) 4341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.