Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006987

Physical Location & Seq

Genomic Coordinates Forward (+)

58524782 .. 58527680

Gene Structure 2899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0458200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGGTCAGGAGCTTTTATCTTTTTGTCCAACAGAAGCGAAGAGATTGCTGTGGATTGTGGGGATGTTGTTTGCTTTGATTTTGGTCCTCCAGCATCTTGAACTTCCATACGGTAGTAATTTATCATCTGTACTTACGGCTGGACAGGTTCCAGTGGAGAAAAATAGTAGCTTCCGAGCTAGAGACCCATCATCTACTGTTAATATGGTTGGCAATGAGTCAGTTTCTAATGGTTTGGACGATACTGCTACACATCCATTTCATGAGATAGCTAACAATAATATGACTTCTGATTTGGTATCAGACGGAAGTGGAGGCTCAGAAAGAACTTTAGAAATAGACGAGGATGAAGATGAATCTGGAAGTTTGGTAAAGGAAAATACTACCGATATTACTCTTTCAGAAGGGAGGACTGAGAAGGGGAGTAATACTACAGACCCAGGTGGAAATGAAAATACTGGTTTTCCAACCACTCCACCCGCATACCCACGGGTGAATCCATCACTTAATACATCTCCTGTAGTTGTTGAAACAGATGTTGGAGCTCCCATTATATCTGTTGACTCAAATGTGACTTTAGTAGAGAAAGATCAAACGCCCTCTTCTGAGAAAACTGACAAATCTGAGCAACTGCATAGTGGCCTCAACGAAACAGGAAAGGATTCTTCAGTGCCCAGAGTCCCTGTAGTGAACAAAGTGCCAGAGGTTCCGTCATTGGAAGTATATACAATATCTGATATGAACAAGCTGTTACATCATAGTTGGACCTCGTACCATTCAGTGATACCACAATGGTCTTCACCCGCTGACCAAGAGATGCAAGATGCAGCATCACAGATTGAAAATGCACCCATCATAAAGAATGATCCAAATCTTTATGCTCCTCTTTATCGGAATCTTTCTATGTTTAAAAGGAGCTATGAATTAATGGAGAGCACTCTTAAAGTATACGTTTACAGGGAAGGACAAAGACCTATAATGCATACACCGGTACTCAAAGGGATATATGCTTCTGAGGGATGGTTCATGAAGCAGCTCGAAGATCACAAAAGATTTGTTACTAAAGACCCTCAGAAAGCGCACCTGTATTACTTACCTTTTAGCTCTCGAATGTTAGAGGAAAGACTATATGTGCAAGGATCACACAGTCATAAGAATCTAATAGAGTATTTGAAGAACTACTTGGACATGATTGCAGGGAAATATCCTTTCTGGAATAGAACTGGTGGAGCAGATCATTTCCTTGTTGCTTGCCATGACTGGGCCCCGTCAGAAACCAAGAAATACATGGCTAAGTGCATTAGAGCCCTCTGCAATGCTGATATGAAAGAAGGTTTTGTATTTGGCAAGGACGCATCTCTTCCAGAAACGTATGTCCAGAATTCCAAGAATCCTCTCAGAGATCTTGGAGGCAACCGTCCTTCCAAGAGGTCCATACTTGCTTTTTTTGCTGGTAGCATGCATGGTTATGTACGGCCGATTCTGTTGCAGCATTGGGAAAACAAAGATCCCGACATGAAAATCTTTGGTCGGTTGCCGAAGAGCAAAGGCAACAAGATCTACGTGCGTCATATGAAGAGCAGCAAGTACTGCATTTGCGCAAAGGGTTACGAAGTGAACAGTCCTAGAGTGGTAGAGGCCATTTTCTACGAGTGTGTTCCGGTGATTATATCAGACAATTTTGTGCCTCCATTTTTCGAAGTTCTGAAATGGGAGTCGTTTGCTGTTTTCGTGTTGGAGAAAGATATTCCAAATTTGAAGGATATACTGCTTTCAATCCCAAAGAAGAGATATCTGCAGATGCAAATGAGAGTAAAAAGGGTACAACAGCATTTTCTGTGGCATGCTAGGCCTGAGAAGAAAATTTTGGTACATGAATTGGTTAAATTATTTTGTATTTACATGAATAATGAATTGGAGGCATATAAATGTCAACTTCTCGGAAAGGCCAAAACCCGTGACAGAGGAGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0007275 GO:0007389 GO:0008134 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0010022 GO:0010073 GO:0010093 GO:0010582 GO:0022414 GO:0032501 GO:0032502 GO:0046983 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048507 GO:0048509 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:1901363 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K-box SRF-TF

Protein Analysis

657

Amino Acids

74.4

Weight (kDa)

6.86

Isoelectric Point (pI)

44.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	311 - 591	2.3e-67	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006987)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g13510 FvH4_5g13510 FvH4_5g13510
malus_domestica	MD06G1204100.v1.1 MD06G1204300.v1.1 MD14G1215600.v1.1 MD16G1121900.v1.1
prunus_persica	Prupe.5G208400_v2.0.a1 Prupe.5G208400_v2.0.a1 Prupe.5G208400_v2.0.a1
pyrus_communis	pycom06g18250 pycom06g18260 pycom14g17840 pycom17g06530
rosa_chinensis	RchiOBHm_Chr7g0183521
rosa_laevigata	RLG00000005043
rosa_multiflora	Rmu_sc0003610.1_g000001 Rmu_sc0015926.1_g000005
rosa_roxburghii	Rroxscaffold_3G00270410
rosa_rugosa	Rorug06G0458200
rosa_samantha	Rh7AG059400 Rh7BG059200 Rh7CG061000 Rh7DG059600
rosa_wichuraiana	Rw7G004880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1600
AccI	GTMKAC	1 cut(s)	948
AciI	CCGC	2 cut(s)	480, 804
AclWI	GGATC	3 cut(s)	860, 1147, 1502
AcoI	YGGCCR	1 cut(s)	1475
AcsI	RAATTY	3 cut(s)	1381, 1753, 1863
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	7 cut(s)	132, 773, 993, 1473, 1589, 1824, 1872
AfiI	CCNNNNNNNGG	1 cut(s)	1261
AgeI	ACCGGT	1 cut(s)	988
AgsI	TTSAA	6 cut(s)	101, 530, 842, 1174, 1759, 1776
AjnI	CCWGG	1 cut(s)	439
AjuI	GAANNNNNNNTTGG	8 cut(s)	522, 554, 1166, 1198, 1850, 1882, 1898, 1930
AluBI	AGCT	9 cut(s)	13, 171, 179, 272, 545, 748, 918, 1036, 1104
AluI	AGCT	9 cut(s)	13, 171, 179, 272, 545, 748, 918, 1036, 1104
Alw21I	GWGCWC	2 cut(s)	547, 938
Alw26I	GTCTC	1 cut(s)	177
AlwI	GGATC	3 cut(s)	860, 1147, 1502
AoxI	GGCC	6 cut(s)	640, 1263, 1475, 1638, 1850, 1947
ApaI	GGGCCC	1 cut(s)	1267
ApeKI	GCWGC	4 cut(s)	827, 1033, 1489, 1581
ApoI	RAATTY	3 cut(s)	1381, 1753, 1863
ArsI	GACNNNNNNTTYG	2 cut(s)	277, 309
AseI	ATTAAT	1 cut(s)	926
AsiGI	ACCGGT	1 cut(s)	988
Asp700I	GAANNNNTTC	1 cut(s)	661
AspLEI	GCGC	2 cut(s)	1081, 1601
AspS9I	GGNCC	5 cut(s)	85, 765, 1263, 1264, 1431
AsuHPI	GGTGA	3 cut(s)	505, 792, 1675
AsuII	TTCGAA	1 cut(s)	1698
AvaII	GGWCC	3 cut(s)	85, 765, 1431
BaeGI	GKGCMC	2 cut(s)	675, 1267
BanII	GRGCYC	3 cut(s)	547, 1267, 1309
BbsI	GAAGAC	1 cut(s)	789
Bbv12I	GWGCWC	2 cut(s)	547, 938
BbvI	GCAGC	4 cut(s)	839, 1045, 1501, 1593
BccI	CCATC	4 cut(s)	196, 508, 860, 1014
BceAI	ACGGC	2 cut(s)	153, 1490
BcgI	CGANNNNNNTGC	4 cut(s)	28, 62, 1468, 1502
BciT130I	CCWGG	1 cut(s)	441
BcoDI	GTCTC	1 cut(s)	177
BfaI	CTAG	3 cut(s)	180, 1626, 1848
BfmI	CTRYAG	4 cut(s)	432, 519, 684, 1796
BglII	AGATCT	2 cut(s)	1402, 1557
BisI	GCNGC	4 cut(s)	828, 1034, 1490, 1582
BlsI	GCNGC	4 cut(s)	829, 1035, 1491, 1583
BmcAI	AGTACT	1 cut(s)	1589
Bme1390I	CCNGG	1 cut(s)	441
Bme18I	GGWCC	3 cut(s)	85, 765, 1431
BmgT120I	GGNCC	5 cut(s)	85, 765, 1263, 1264, 1431
BmiI	GGNNCC	4 cut(s)	150, 708, 1265, 1266
BmrFI	CCNGG	1 cut(s)	441
BmrI	ACTGGG	1 cut(s)	1270
BmsI	GCATC	6 cut(s)	103, 807, 814, 839, 1364, 1791
BmuI	ACTGGG	1 cut(s)	1270
BpiI	GAAGAC	1 cut(s)	789
BpmI	CTGGAG	1 cut(s)	74
Bpu14I	TTCGAA	1 cut(s)	1698
BsaAI	YACGTR	1 cut(s)	1564
BsaBI	GATNNNNATC	1 cut(s)	870
BsaI	GGTCTC	1 cut(s)	177
BsaJI	CCNNGG	2 cut(s)	439, 488
BsaWI	WCCGGW	2 cut(s)	988, 1660
Bsc4I	CCNNNNNNNGG	1 cut(s)	1261
Bse118I	RCCGGY	1 cut(s)	988
Bse1I	ACTGG	4 cut(s)	152, 463, 1228, 1265
Bse3DI	GCAATG	2 cut(s)	220, 1321
Bse8I	GATNNNNATC	1 cut(s)	870
BseBI	CCWGG	1 cut(s)	441
BseDI	CCNNGG	2 cut(s)	439, 488
BseGI	GGATG	4 cut(s)	69, 253, 352, 1025
BseJI	GATNNNNATC	1 cut(s)	870
BseLI	CCNNNNNNNGG	1 cut(s)	1261
BseMI	GCAATG	2 cut(s)	220, 1321
BseMII	CTCAG	8 cut(s)	333, 405, 597, 615, 1005, 1085, 1411, 1845
BseNI	ACTGG	4 cut(s)	152, 463, 1228, 1265
BseRI	GAGGAG	1 cut(s)	873
BseSI	GKGCMC	2 cut(s)	675, 1267
BseX3I	CGGCCG	1 cut(s)	1475
BseXI	GCAGC	4 cut(s)	839, 1045, 1501, 1593
Bsh1285I	CGRYCG	1 cut(s)	1478
BshFI	GGCC	6 cut(s)	642, 1265, 1477, 1640, 1852, 1949
BshTI	ACCGGT	1 cut(s)	988
BsiEI	CGRYCG	1 cut(s)	1478
BsiHKAI	GWGCWC	2 cut(s)	547, 938
BsiSI	CCGG	2 cut(s)	989, 1661
BslFI	GGGAC	1 cut(s)	665
BslI	CCNNNNNNNGG	1 cut(s)	1261
BsmAI	GTCTC	1 cut(s)	177
BsmFI	GGGAC	1 cut(s)	665
BsnI	GGCC	6 cut(s)	642, 1265, 1477, 1640, 1852, 1949
Bso31I	GGTCTC	1 cut(s)	177
Bsp119I	TTCGAA	1 cut(s)	1698
Bsp120I	GGGCCC	1 cut(s)	1263
Bsp1286I	GDGCHC	5 cut(s)	547, 675, 938, 1267, 1309
Bsp143I	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
BspACI	CCGC	2 cut(s)	480, 804
BspANI	GGCC	6 cut(s)	642, 1265, 1477, 1640, 1852, 1949
BspCNI	CTCAG	8 cut(s)	332, 406, 598, 616, 1006, 1084, 1410, 1846
BspHI	TCATGA	2 cut(s)	262, 1026
BspLI	GGNNCC	4 cut(s)	150, 708, 1265, 1266
BspMAI	CTGCAG	1 cut(s)	1800
BspPI	GGATC	3 cut(s)	860, 1147, 1502
BspQI	GCTCTTC	2 cut(s)	1535, 1571
BspT104I	TTCGAA	1 cut(s)	1698
BspTNI	GGTCTC	1 cut(s)	177
BsrDI	GCAATG	2 cut(s)	220, 1321
BsrFI	RCCGGY	1 cut(s)	988
BsrI	ACTGG	4 cut(s)	152, 463, 1228, 1265
BssAI	RCCGGY	1 cut(s)	988
BssECI	CCNNGG	2 cut(s)	439, 488
BssMI	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
BssNAI	GTATAC	1 cut(s)	949
Bst1107I	GTATAC	1 cut(s)	949
Bst2UI	CCWGG	1 cut(s)	441
Bst4CI	ACNGT	5 cut(s)	113, 199, 1148, 1418, 1622
Bst6I	CTCTTC	6 cut(s)	35, 607, 1365, 1535, 1571, 1781
BstAPI	GCANNNNNTGC	1 cut(s)	1590
BstBAI	YACGTR	1 cut(s)	1564
BstBI	TTCGAA	1 cut(s)	1698
BstC8I	GCNNGC	3 cut(s)	1252, 1460, 1845
BstDEI	CTNAG	9 cut(s)	319, 414, 606, 624, 1014, 1071, 1293, 1397, 1854
BstDSI	CCRYGG	1 cut(s)	488
BstF5I	GGATG	4 cut(s)	69, 253, 352, 1025
BstHHI	GCGC	2 cut(s)	1081, 1601
BstKTI	GATC	8 cut(s)	592, 868, 1045, 1142, 1237, 1405, 1510, 1560
BstMAI	GTCTC	1 cut(s)	177
BstMBI	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
BstMCI	CGRYCG	1 cut(s)	1478
BstMWI	GCNNNNNNNGC	3 cut(s)	1448, 1590, 1849
BstNI	CCWGG	1 cut(s)	441
BstNSI	RCATGY	2 cut(s)	1462, 1847
BstSCI	CCNGG	1 cut(s)	439
BstSFI	CTRYAG	4 cut(s)	432, 519, 684, 1796
BstSLI	GKGCMC	2 cut(s)	675, 1267
BstV1I	GCAGC	4 cut(s)	839, 1045, 1501, 1593
BstV2I	GAAGAC	1 cut(s)	789
BstX2I	RGATCY	3 cut(s)	1402, 1507, 1557
BstYI	RGATCY	3 cut(s)	1402, 1507, 1557
BstZ17I	GTATAC	1 cut(s)	949
BstZI	CGGCCG	1 cut(s)	1475
BsuRI	GGCC	6 cut(s)	642, 1265, 1477, 1640, 1852, 1949
BtgI	CCRYGG	1 cut(s)	488
BtsCI	GGATG	4 cut(s)	69, 253, 352, 1025
BtsIMutI	CAGTG	3 cut(s)	159, 675, 786
Cac8I	GCNNGC	3 cut(s)	1252, 1460, 1845
CciI	TCATGA	2 cut(s)	262, 1026
CfoI	GCGC	2 cut(s)	1081, 1601
Cfr10I	RCCGGY	1 cut(s)	988
Cfr13I	GGNCC	5 cut(s)	85, 765, 1263, 1264, 1431
CseI	GACGC	2 cut(s)	1361, 1556
Csp6I	GTAC	7 cut(s)	131, 772, 992, 1472, 1588, 1823, 1871
CspAI	ACCGGT	1 cut(s)	988
CviQI	GTAC	7 cut(s)	131, 772, 992, 1472, 1588, 1823, 1871
DdeI	CTNAG	9 cut(s)	319, 414, 606, 624, 1014, 1071, 1293, 1397, 1854
DpnI	GATC	8 cut(s)	591, 867, 1044, 1141, 1236, 1404, 1509, 1559
DpnII	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
DraI	TTTAAA	1 cut(s)	910
EaeI	YGGCCR	1 cut(s)	1475
EagI	CGGCCG	1 cut(s)	1475
Eam1104I	CTCTTC	6 cut(s)	35, 607, 1365, 1535, 1571, 1781
EarI	CTCTTC	6 cut(s)	35, 607, 1365, 1535, 1571, 1781
Ecl136II	GAGCTC	1 cut(s)	545
EclXI	CGGCCG	1 cut(s)	1475
Eco147I	AGGCCT	1 cut(s)	1852
Eco24I	GRGCYC	3 cut(s)	547, 1267, 1309
Eco31I	GGTCTC	1 cut(s)	177
Eco32I	GATATC	1 cut(s)	1793
Eco47I	GGWCC	3 cut(s)	85, 765, 1431
Eco52I	CGGCCG	1 cut(s)	1475
Eco53kI	GAGCTC	1 cut(s)	545
Eco57I	CTGAAG	1 cut(s)	651
EcoICRI	GAGCTC	1 cut(s)	545
EcoO109I	RGGNCCY	1 cut(s)	1264
EcoRI	GAATTC	1 cut(s)	1381
EcoRII	CCWGG	1 cut(s)	439
EcoRV	GATATC	1 cut(s)	1793
EcoT22I	ATGCAT	2 cut(s)	984, 1464
EcoT38I	GRGCYC	3 cut(s)	547, 1267, 1309
FalI	AAGNNNNNCTT	2 cut(s)	1166, 1198
FaqI	GGGAC	1 cut(s)	665
FauI	CCCGC	2 cut(s)	487, 811
FauNDI	CATATG	1 cut(s)	1572
FblI	GTMKAC	1 cut(s)	948
Fnu4HI	GCNGC	4 cut(s)	828, 1034, 1490, 1582
FokI	GGATG	4 cut(s)	76, 240, 359, 1032
FriOI	GRGCYC	3 cut(s)	547, 1267, 1309
Fsp4HI	GCNGC	4 cut(s)	828, 1034, 1490, 1582
FspBI	CTAG	3 cut(s)	180, 1626, 1848
FspI	TGCGCA	1 cut(s)	1600
GlaI	GCGC	2 cut(s)	1080, 1600
GluI	GCNGC	4 cut(s)	828, 1034, 1490, 1582
GsuI	CTGGAG	1 cut(s)	74
HaeIII	GGCC	6 cut(s)	642, 1265, 1477, 1640, 1852, 1949
HapII	CCGG	2 cut(s)	989, 1661
HgaI	GACGC	2 cut(s)	1361, 1556
HhaI	GCGC	2 cut(s)	1081, 1601
Hin6I	GCGC	2 cut(s)	1079, 1599
HinP1I	GCGC	2 cut(s)	1079, 1599
HincII	GTYRAC	2 cut(s)	562, 1934
HindII	GTYRAC	2 cut(s)	562, 1934
HpaII	CCGG	2 cut(s)	989, 1661
HphI	GGTGA	3 cut(s)	505, 792, 1675
Hpy166II	GTNNAC	6 cut(s)	562, 691, 949, 955, 1618, 1934
Hpy8I	GTNNAC	6 cut(s)	562, 691, 949, 955, 1618, 1934
HpyAV	CCTTC	6 cut(s)	398, 412, 956, 1325, 1431, 1753
HpyCH4III	ACNGT	5 cut(s)	113, 199, 1148, 1418, 1622
HpyCH4IV	ACGT	3 cut(s)	951, 1370, 1563
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1448, 1590, 1849
HpyF3I	CTNAG	9 cut(s)	319, 414, 606, 624, 1014, 1071, 1293, 1397, 1854
HpySE526I	ACGT	3 cut(s)	951, 1370, 1563
HspAI	GCGC	2 cut(s)	1079, 1599
Kzo9I	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
LguI	GCTCTTC	2 cut(s)	1535, 1571
LmnI	GCTCC	7 cut(s)	10, 542, 550, 886, 915, 1229, 1967
Lsp1109I	GCAGC	4 cut(s)	839, 1045, 1501, 1593
LweI	GCATC	6 cut(s)	103, 807, 814, 839, 1364, 1791
MaeI	CTAG	3 cut(s)	180, 1626, 1848
MaeII	ACGT	3 cut(s)	951, 1370, 1563
MaeIII	GTNAC	5 cut(s)	571, 750, 1057, 1607, 1958
MalI	GATC	8 cut(s)	591, 867, 1044, 1141, 1236, 1404, 1509, 1559
MboI	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
MflI	RGATCY	3 cut(s)	1402, 1507, 1557
MhlI	GDGCHC	5 cut(s)	547, 675, 938, 1267, 1309
MluCI	AATT	9 cut(s)	118, 923, 1381, 1678, 1753, 1863, 1877, 1886, 1913
MlyI	GAGTC	4 cut(s)	227, 557, 687, 1724
MmeI	TCCRAC	5 cut(s)	53, 491, 520, 743, 1716
Mph1103I	ATGCAT	2 cut(s)	984, 1464
MroXI	GAANNNNTTC	1 cut(s)	661
MseI	TTAA	6 cut(s)	201, 507, 909, 926, 942, 1884
MslI	CAYNNNNRTG	2 cut(s)	1467, 1927
MspA1I	CMGCKG	1 cut(s)	806
MspI	CCGG	2 cut(s)	989, 1661
MspR9I	CCNGG	1 cut(s)	441
MvaI	CCWGG	1 cut(s)	441
MwoI	GCNNNNNNNGC	3 cut(s)	1448, 1590, 1849
NdeI	CATATG	1 cut(s)	1572
NdeII	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
NlaIV	GGNNCC	4 cut(s)	150, 708, 1265, 1266
NmuCI	GTSAC	2 cut(s)	571, 1958
NsbI	TGCGCA	1 cut(s)	1600
NsiI	ATGCAT	2 cut(s)	984, 1464
NspI	RCATGY	2 cut(s)	1462, 1847
NspV	TTCGAA	1 cut(s)	1698
PaeI	GCATGC	2 cut(s)	1462, 1847
PagI	TCATGA	2 cut(s)	262, 1026
PceI	AGGCCT	1 cut(s)	1852
PciSI	GCTCTTC	2 cut(s)	1535, 1571
PdmI	GAANNNNTTC	1 cut(s)	661
PfeI	GAWTC	7 cut(s)	356, 496, 662, 895, 1156, 1390, 1480
PinAI	ACCGGT	1 cut(s)	988
PkrI	GCNGC	4 cut(s)	829, 1035, 1491, 1583
PleI	GAGTC	4 cut(s)	226, 557, 686, 1723
PpsI	GAGTC	4 cut(s)	226, 557, 686, 1723
Ppu21I	YACGTR	1 cut(s)	1564
PshBI	ATTAAT	1 cut(s)	926
Psp124BI	GAGCTC	1 cut(s)	547
Psp6I	CCWGG	1 cut(s)	439
PspGI	CCWGG	1 cut(s)	439
PspN4I	GGNNCC	4 cut(s)	150, 708, 1265, 1266
PspOMI	GGGCCC	1 cut(s)	1263
PspPI	GGNCC	5 cut(s)	85, 765, 1263, 1264, 1431
PstI	CTGCAG	1 cut(s)	1800
PsuI	RGATCY	3 cut(s)	1402, 1507, 1557
RsaI	GTAC	7 cut(s)	132, 773, 993, 1473, 1589, 1824, 1872
RsaNI	GTAC	7 cut(s)	131, 772, 992, 1472, 1588, 1823, 1871
RseI	CAYNNNNRTG	2 cut(s)	1467, 1927
SacI	GAGCTC	1 cut(s)	547
SapI	GCTCTTC	2 cut(s)	1535, 1571
SaqAI	TTAA	6 cut(s)	201, 507, 909, 926, 942, 1884
SatI	GCNGC	4 cut(s)	828, 1034, 1490, 1582
Sau3AI	GATC	8 cut(s)	589, 865, 1042, 1139, 1234, 1402, 1507, 1557
Sau96I	GGNCC	5 cut(s)	85, 765, 1263, 1264, 1431
ScaI	AGTACT	1 cut(s)	1589
SchI	GAGTC	4 cut(s)	227, 557, 687, 1724
ScrFI	CCNGG	1 cut(s)	441
SduI	GDGCHC	5 cut(s)	547, 675, 938, 1267, 1309
SfaNI	GCATC	6 cut(s)	103, 807, 814, 839, 1364, 1791
SfcI	CTRYAG	4 cut(s)	432, 519, 684, 1796
SfuI	TTCGAA	1 cut(s)	1698
SinI	GGWCC	3 cut(s)	85, 765, 1431
SmiMI	CAYNNNNRTG	2 cut(s)	1467, 1927
SphI	GCATGC	2 cut(s)	1462, 1847
Sse9I	AATT	9 cut(s)	118, 923, 1381, 1678, 1753, 1863, 1877, 1886, 1913
SseBI	AGGCCT	1 cut(s)	1852
SsiI	CCGC	2 cut(s)	480, 804
SspMI	CTAG	3 cut(s)	180, 1626, 1848
SstI	GAGCTC	1 cut(s)	547
StuI	AGGCCT	1 cut(s)	1852
StyD4I	CCNGG	1 cut(s)	439
TaaI	ACNGT	5 cut(s)	113, 199, 1148, 1418, 1622
TaiI	ACGT	3 cut(s)	954, 1373, 1566
TaqI	TCGA	3 cut(s)	1038, 1108, 1698
TasI	AATT	9 cut(s)	118, 923, 1381, 1678, 1753, 1863, 1877, 1886, 1913
TatI	WGTACW	2 cut(s)	130, 1587
TfiI	GAWTC	7 cut(s)	356, 496, 662, 895, 1156, 1390, 1480
Tru1I	TTAA	6 cut(s)	201, 507, 909, 926, 942, 1884
Tru9I	TTAA	6 cut(s)	201, 507, 909, 926, 942, 1884
TscAI	CASTG	3 cut(s)	159, 675, 786
TseFI	GTSAC	2 cut(s)	571, 1958
TseI	GCWGC	4 cut(s)	827, 1033, 1489, 1581
Tsp45I	GTSAC	2 cut(s)	571, 1958
TspGWI	ACGGA	2 cut(s)	321, 699
TspRI	CASTG	3 cut(s)	159, 675, 786
VpaK11BI	GGWCC	3 cut(s)	85, 765, 1431
VspI	ATTAAT	1 cut(s)	926
XapI	RAATTY	3 cut(s)	1381, 1753, 1863
XceI	RCATGY	2 cut(s)	1462, 1847
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1285
XmiI	GTMKAC	1 cut(s)	948
XmnI	GAANNNNTTC	1 cut(s)	661
XspI	CTAG	3 cut(s)	180, 1626, 1848
ZrmI	AGTACT	1 cut(s)	1589
Zsp2I	ATGCAT	2 cut(s)	984, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.