Rorug07G0105700

Ribose-phosphate pyrophosphokinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0009863
Physical Location & Seq
Forward (+)
8296499 .. 8299739
3241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0105700.1

Sequence Viewer

Length: 1476 bp
ATGGGTGGTAATGGAGGTGAGGCAGTGGTTGTGTGCAGTGGCAAGAGCATGGGAACAGGGATAACAGTATGGGACATAGACACAGGGGATCGTCTCCTTCACATACCCTCCTGTGCTTCTCCTCCTCGTGCACTTCTGTGCCTGAGGAACCAGATCATTGTTGCCTCTCAGATTCACAGGCCTGGCTCTGTTGGCGGTGGGGCCATCTCCATGTGGGCCTTAAACAAGCCTCAGCAGCCTCTTTGGAGCTACCCGTTGGAGGCCATTGTATCACTTGCATGCACAAAGGATGGTGTATATCTCGCCGGTGGTGCTCCATCCGGAAATGCTTATCTTTGGGAGGTCAATAGTGGAAAATTGCTCAAAACTTGGCGTGTACATTGTAATTCTTTGAACTGCATGCTGTTTTTTGATGATGGTTCTCTTCTCATTTCTGGCGGAGACAATGGCATGATCTGTGTGTGGTCTTTGATTAGTTTGCTAGATGGGGAAGATTACCAAAGCTTTCCCTCGTTACTAAATTATTCAATGGATCACAAATCCTCTATAACTGGCCTGTCAACTACATCAGGGAGCTCAAGATTGGTCCTAGTATCAAGCTCACTTGATGGCTCATGCAAGGTTTGGGATTTAGGCTTGGGAAAGCTTCTGCAAACTCAAGTTTATCCAATATCAATAACTGCACTTATTCTTAACCCAACAGAGCAGCTCTTTTTCTCTGGTAGTGTAGATGGAAGAATTTTCGTGAACCAACTTGAAATTGGACTCGTGGATGAGGACCCTTTGTTCGCCGTTGAAGATCAAGCAGTTGTGCTAAAAGGACACAATGTATCTATTACTGCATTGACCTTCTGCCAATCGGGTCTGATATCTGCATCTGAGGATTGCACCATCTGCATCTGGGATGTCACCACTTGGGCAATCATTCGTAGATTCGACCATCAGAAAGGTAAAGTTACCCTATATCTTCTGCTGTCTTTTGTTTTGAATCCTGTTGATCTTTTAGAAGGGGGTGTAACTAATCTGGCAGTGATCCCACGGTCCTCACTGCTTCCGGGGTCAAACCAACGGAGAGGGTCTGGTGTTTCCTTACTCGAGAAGTATCCTCAGCCTGCCAACTCATCCAGGGGAGACATGAGTATCACTCTTGCTTCGCCATGCCAATTCCTGAAAGAGAACCAGACCTCGATCAATTTTCAAACCACTGACCAACATATATATGACATGGAGAAAGAATACACTCCTGCGTCAATGGAAATGAAATTGGAACGAAGTTTAGAGGAGCGGACGTGGGCAACAAGAATGGCAAACCATGTCATGGACATGAATAGGCACCTACAGTCGCGGTTGTTAGATTTGATGCAGAGCAGCTTTTTATCGTCCAGGTCTACTGAAATGGATTCACCTTCAACCAAAAAGAGAAAGACCCTCATGCTTGAAAGTCCTCCATTACAGGAGGAGGAGAAGCAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00030 ko00230 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00230 map01100 map01110 map01120 map01130 map01200 map01230
Pfam Domains
Protein Families
Pribosyl_synth Pribosyltran_N

Protein Analysis

491

Amino Acids

53.75

Weight (kDa)

5.45

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Gbeta PF25391 63 - 210 3e-07 G protein beta WD-40 repeat protein
Beta-prop_WDR3_2nd PF25172 65 - 320 2.1e-08 WDR3 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 67 - 157 2.3e-08 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 67 - 187 7.8e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st PF25173 70 - 249 4.3e-17 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 87 - 157 4.3e-06 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 87 - 211 6.3e-09 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 88 - 244 3.1e-14 WDR5 beta-propeller domain
WD40_Prp19 PF24814 89 - 219 4.9e-08 Prp19 WD40 domain
WD40 PF00400 118 - 156 2.5e-06 WD domain, G-beta repeat
EIF3I PF24805 127 - 319 4.8e-06 EIF3I
WD40_WDHD1_1st PF24817 178 - 318 2.1e-07 WDHD1 first WD40 domain
WD40_Prp19 PF24814 179 - 320 3.7e-08 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 179 - 320 9.9e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 197 - 320 1.7e-09 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 267 - 321 9.5e-08 WDR3 first beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0009863)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32380 AT1G32380 AT2G35390 AT2G35390 AT2G35390 AT2G35390
fragaria_vesca FvH4_5g21390
malus_domestica MD06G1028600.v1.1
prunus_persica Prupe.5G043200_v2.0.a1
pyrus_communis pycom06g02270
rosa_chinensis RchiOBHm_Chr7g0208781
rosa_laevigata RLG00000003197
rosa_multiflora Rmu_co8445915.1_g000001 Rmu_sc0013928.1_g000004 Rmu_sc0014960.1_g000001
rosa_roxburghii Rroxscaffold_3G00250280
rosa_rugosa Rorug07G0105700
rosa_samantha Rh7AG240800 Rh7BG235800 Rh7CG255400
rosa_wichuraiana Rw7G020430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1332
AccB7I CCANNNNNTGG 1 cut(s) 1318
AccBSI CCGCTC 1 cut(s) 1285
AccI GTMKAC 1 cut(s) 1388
AccII CGCG 1 cut(s) 1345
AccIII TCCGGA 1 cut(s) 320
AciI CCGC 4 cut(s) 195, 438, 1285, 1345
AclWI GGATC 3 cut(s) 96, 540, 1027
AcsI RAATTY 1 cut(s) 738
AfaI GTAC 1 cut(s) 378
AfiI CCNNNNNNNGG 2 cut(s) 259, 1318
AgsI TTSAA 8 cut(s) 394, 528, 758, 797, 988, 1199, 1410, 1439
AjiI CACGTC 1 cut(s) 1290
AjnI CCWGG 3 cut(s) 181, 1124, 1382
AleI CACNNNNGTG 1 cut(s) 136
AloI GAACNNNNNNTCC 2 cut(s) 770, 802
AluBI AGCT 7 cut(s) 249, 504, 576, 600, 646, 709, 1371
AluI AGCT 7 cut(s) 249, 504, 576, 600, 646, 709, 1371
Alw21I GWGCWC 3 cut(s) 133, 316, 578
Alw26I GTCTC 3 cut(s) 98, 435, 1125
Alw44I GTGCAC 1 cut(s) 129
AlwI GGATC 3 cut(s) 96, 540, 1027
Ama87I CYCGRG 1 cut(s) 1094
Aor13HI TCCGGA 1 cut(s) 320
AoxI GGCC 5 cut(s) 179, 201, 216, 261, 553
ApaLI GTGCAC 1 cut(s) 129
ApeKI GCWGC 3 cut(s) 235, 706, 1368
ApoI RAATTY 1 cut(s) 738
ArsI GACNNNNNNTTYG 2 cut(s) 770, 802
AspS9I GGNCC 5 cut(s) 201, 216, 586, 778, 1041
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 3 cut(s) 29, 901, 1395
AvaI CYCGRG 1 cut(s) 1094
AvaII GGWCC 3 cut(s) 586, 778, 1041
AxyI CCTNAGG 1 cut(s) 143
BaeGI GKGCMC 1 cut(s) 133
BaeI ACNNNNGTAYC 2 cut(s) 1123, 1156
BanI GGYRCC 1 cut(s) 1332
BanII GRGCYC 1 cut(s) 578
BauI CACGAG 2 cut(s) 126, 767
Bbv12I GWGCWC 3 cut(s) 133, 316, 578
BbvCI CCTCAGC 2 cut(s) 231, 1107
BbvI GCAGC 3 cut(s) 247, 718, 1380
BccI CCATC 9 cut(s) 212, 284, 325, 410, 479, 602, 725, 899, 948
BceAI ACGGC 1 cut(s) 776
BciT130I CCWGG 3 cut(s) 183, 1126, 1384
BciVI GTATCC 1 cut(s) 1113
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 3 cut(s) 98, 435, 1125
BfaI CTAG 2 cut(s) 482, 590
BfmI CTRYAG 1 cut(s) 1337
BfuI GTATCC 1 cut(s) 1113
BisI GCNGC 3 cut(s) 236, 707, 1369
BlsI GCNGC 3 cut(s) 237, 708, 1370
Bme1390I CCNGG 4 cut(s) 183, 1056, 1126, 1384
Bme18I GGWCC 3 cut(s) 586, 778, 1041
BmeT110I CYCGRG 1 cut(s) 1094
BmgBI CACGTC 1 cut(s) 1290
BmgT120I GGNCC 5 cut(s) 201, 216, 586, 778, 1041
BmiI GGNNCC 4 cut(s) 149, 202, 780, 1334
BmrFI CCNGG 4 cut(s) 183, 1056, 1126, 1384
BmsI GCATC 3 cut(s) 884, 906, 1350
BplI GAGNNNNNCTC 2 cut(s) 1129, 1161
Bpu10I CCTNAGC 2 cut(s) 231, 1107
BpuEI CTTGAG 2 cut(s) 562, 642
BpuMI CCSGG 1 cut(s) 1056
BsaJI CCNNGG 3 cut(s) 1037, 1055, 1125
BsaWI WCCGGW 1 cut(s) 320
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 1274, 1304
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 1318
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 1 cut(s) 556
Bse21I CCTNAGG 1 cut(s) 143
BseAI TCCGGA 1 cut(s) 320
BseBI CCWGG 3 cut(s) 183, 1126, 1384
BseDI CCNNGG 3 cut(s) 1037, 1055, 1125
BseGI GGATG 5 cut(s) 295, 317, 778, 910, 1121
BseLI CCNNNNNNNGG 2 cut(s) 259, 1318
BseMII CTCAG 5 cut(s) 134, 182, 245, 870, 1121
BseNI ACTGG 1 cut(s) 556
BseRI GAGGAG 5 cut(s) 111, 114, 1295, 1472, 1475
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 3 cut(s) 247, 718, 1380
BsgI GTGCAG 2 cut(s) 55, 666
Bsh1236I CGCG 1 cut(s) 1345
BshFI GGCC 5 cut(s) 181, 203, 218, 263, 555
BshNI GGYRCC 1 cut(s) 1332
BsiHKAI GWGCWC 3 cut(s) 133, 316, 578
BsiHKCI CYCGRG 1 cut(s) 1094
BsiSI CCGG 3 cut(s) 306, 321, 1055
BslFI GGGAC 1 cut(s) 86
BslI CCNNNNNNNGG 2 cut(s) 259, 1318
BsmAI GTCTC 3 cut(s) 98, 435, 1125
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 1 cut(s) 86
BsnI GGCC 5 cut(s) 181, 203, 218, 263, 555
BsoBI CYCGRG 1 cut(s) 1094
Bsp1286I GDGCHC 3 cut(s) 133, 316, 578
Bsp13I TCCGGA 1 cut(s) 320
Bsp1407I TGTACA 1 cut(s) 376
Bsp143I GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
BspACI CCGC 4 cut(s) 195, 438, 1285, 1345
BspANI GGCC 5 cut(s) 181, 203, 218, 263, 555
BspCNI CTCAG 5 cut(s) 135, 181, 244, 871, 1120
BspEI TCCGGA 1 cut(s) 320
BspFNI CGCG 1 cut(s) 1345
BspLI GGNNCC 4 cut(s) 149, 202, 780, 1334
BspPI GGATC 3 cut(s) 96, 540, 1027
BspT107I GGYRCC 1 cut(s) 1332
BsrBI CCGCTC 1 cut(s) 1285
BsrFI RCCGGY 1 cut(s) 305
BsrGI TGTACA 1 cut(s) 376
BsrI ACTGG 1 cut(s) 556
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 3 cut(s) 1037, 1055, 1125
BssMI GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
BssSI CACGAG 2 cut(s) 126, 767
Bst2BI CACGAG 2 cut(s) 126, 767
Bst2UI CCWGG 3 cut(s) 183, 1126, 1384
Bst4CI ACNGT 3 cut(s) 67, 1041, 1341
Bst6I CTCTTC 1 cut(s) 429
BstAPI GCANNNNNTGC 1 cut(s) 894
BstAUI TGTACA 1 cut(s) 376
BstC8I GCNNGC 3 cut(s) 280, 401, 1113
BstDEI CTNAG 5 cut(s) 143, 168, 231, 879, 1107
BstDSI CCRYGG 1 cut(s) 1037
BstF5I GGATG 5 cut(s) 295, 317, 778, 910, 1121
BstFNI CGCG 1 cut(s) 1345
BstKTI GATC 8 cut(s) 91, 156, 456, 535, 802, 1000, 1035, 1191
BstMAI GTCTC 3 cut(s) 98, 435, 1125
BstMBI GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
BstMWI GCNNNNNNNGC 4 cut(s) 192, 235, 311, 894
BstNI CCWGG 3 cut(s) 183, 1126, 1384
BstNSI RCATGY 2 cut(s) 282, 403
BstSCI CCNGG 4 cut(s) 181, 1054, 1124, 1382
BstSFI CTRYAG 1 cut(s) 1337
BstSLI GKGCMC 1 cut(s) 133
BstUI CGCG 1 cut(s) 1345
BstV1I GCAGC 3 cut(s) 247, 718, 1380
Bsu36I CCTNAGG 1 cut(s) 143
BsuI GTATCC 1 cut(s) 1113
BsuRI GGCC 5 cut(s) 181, 203, 218, 263, 555
BtgI CCRYGG 1 cut(s) 1037
BtrI CACGTC 1 cut(s) 1290
BtsCI GGATG 5 cut(s) 295, 317, 778, 910, 1121
BtsI GCAGTG 4 cut(s) 30, 43, 1035, 1046
BtsIMutI CAGTG 5 cut(s) 30, 43, 1035, 1046, 1203
Cac8I GCNNGC 3 cut(s) 280, 401, 1113
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 5 cut(s) 201, 216, 586, 778, 1041
CseI GACGC 1 cut(s) 1236
Csp6I GTAC 1 cut(s) 377
CviQI GTAC 1 cut(s) 377
DdeI CTNAG 5 cut(s) 143, 168, 231, 879, 1107
DpnI GATC 8 cut(s) 90, 155, 455, 534, 801, 999, 1034, 1190
DpnII GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
Eam1104I CTCTTC 1 cut(s) 429
EarI CTCTTC 1 cut(s) 429
EciI GGCGGA 1 cut(s) 453
Ecl136II GAGCTC 1 cut(s) 576
Eco147I AGGCCT 1 cut(s) 181
Eco24I GRGCYC 1 cut(s) 578
Eco32I GATATC 1 cut(s) 870
Eco47I GGWCC 3 cut(s) 586, 778, 1041
Eco53kI GAGCTC 1 cut(s) 576
Eco81I CCTNAGG 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 1094
EcoICRI GAGCTC 1 cut(s) 576
EcoO109I RGGNCCY 1 cut(s) 778
EcoRII CCWGG 3 cut(s) 181, 1124, 1382
EcoRV GATATC 1 cut(s) 870
EcoT38I GRGCYC 1 cut(s) 578
Esp3I CGTCTC 1 cut(s) 98
FaqI GGGAC 1 cut(s) 86
FblI GTMKAC 1 cut(s) 1388
Fnu4HI GCNGC 3 cut(s) 236, 707, 1369
FokI GGATG 5 cut(s) 302, 304, 785, 917, 1108
FriOI GRGCYC 1 cut(s) 578
Fsp4HI GCNGC 3 cut(s) 236, 707, 1369
FspBI CTAG 2 cut(s) 482, 590
GluI GCNGC 3 cut(s) 236, 707, 1369
HaeIII GGCC 5 cut(s) 181, 203, 218, 263, 555
HapII CCGG 3 cut(s) 306, 321, 1055
HgaI GACGC 1 cut(s) 1236
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HindIII AAGCTT 2 cut(s) 502, 644
HinfI GANTC 5 cut(s) 172, 765, 933, 988, 1400
HpaII CCGG 3 cut(s) 306, 321, 1055
HphI GGTGA 3 cut(s) 29, 901, 1395
Hpy166II GTNNAC 5 cut(s) 131, 377, 561, 748, 1389
Hpy188I TCNGA 4 cut(s) 171, 867, 880, 945
Hpy188III TCNNGA 5 cut(s) 321, 579, 745, 1096, 1168
Hpy8I GTNNAC 5 cut(s) 131, 377, 561, 748, 1389
HpyAV CCTTC 4 cut(s) 107, 859, 1001, 1416
HpyCH4III ACNGT 3 cut(s) 67, 1041, 1341
HpyCH4IV ACGT 1 cut(s) 1289
HpyF10VI GCNNNNNNNGC 4 cut(s) 192, 235, 311, 894
HpyF3I CTNAG 5 cut(s) 143, 168, 231, 879, 1107
HpySE526I ACGT 1 cut(s) 1289
Kpn2I TCCGGA 1 cut(s) 320
Kzo9I GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
LmnI GCTCC 4 cut(s) 246, 319, 573, 1282
Lsp1109I GCAGC 3 cut(s) 247, 718, 1380
LweI GCATC 3 cut(s) 884, 906, 1350
MaeI CTAG 2 cut(s) 482, 590
MaeII ACGT 1 cut(s) 1289
MaeIII GTNAC 4 cut(s) 513, 907, 955, 1015
MalI GATC 8 cut(s) 90, 155, 455, 534, 801, 999, 1034, 1190
MbiI CCGCTC 1 cut(s) 1285
MboI GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
MboII GAAGA 5 cut(s) 416, 503, 747, 809, 959
MhlI GDGCHC 3 cut(s) 133, 316, 578
MluCI AATT 8 cut(s) 356, 385, 520, 738, 759, 1163, 1192, 1262
MlyI GAGTC 1 cut(s) 759
MmeI TCCRAC 1 cut(s) 237
MroI TCCGGA 1 cut(s) 320
MseI TTAA 2 cut(s) 221, 693
MslI CAYNNNNRTG 5 cut(s) 136, 209, 277, 1218, 1322
MspI CCGG 3 cut(s) 306, 321, 1055
MspR9I CCNGG 4 cut(s) 183, 1056, 1126, 1384
MvaI CCWGG 3 cut(s) 183, 1126, 1384
MvnI CGCG 1 cut(s) 1345
MwoI GCNNNNNNNGC 4 cut(s) 192, 235, 311, 894
NciI CCSGG 1 cut(s) 1056
NdeII GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
NlaIV GGNNCC 4 cut(s) 149, 202, 780, 1334
NmuCI GTSAC 1 cut(s) 907
NspI RCATGY 2 cut(s) 282, 403
OliI CACNNNNGTG 1 cut(s) 136
PaeI GCATGC 2 cut(s) 282, 403
PaeR7I CTCGAG 1 cut(s) 1094
PceI AGGCCT 1 cut(s) 181
PfeI GAWTC 4 cut(s) 172, 933, 988, 1400
PflMI CCANNNNNTGG 1 cut(s) 1318
PkrI GCNGC 3 cut(s) 237, 708, 1370
PleI GAGTC 1 cut(s) 759
PpsI GAGTC 1 cut(s) 759
PpuMI RGGWCCY 1 cut(s) 778
Psp124BI GAGCTC 1 cut(s) 578
Psp5II RGGWCCY 1 cut(s) 778
Psp6I CCWGG 3 cut(s) 181, 1124, 1382
PspGI CCWGG 3 cut(s) 181, 1124, 1382
PspN4I GGNNCC 4 cut(s) 149, 202, 780, 1334
PspPI GGNCC 5 cut(s) 201, 216, 586, 778, 1041
PspPPI RGGWCCY 1 cut(s) 778
RsaI GTAC 1 cut(s) 378
RsaNI GTAC 1 cut(s) 377
RseI CAYNNNNRTG 5 cut(s) 136, 209, 277, 1218, 1322
SacI GAGCTC 1 cut(s) 578
SaqAI TTAA 2 cut(s) 221, 693
SatI GCNGC 3 cut(s) 236, 707, 1369
Sau3AI GATC 8 cut(s) 88, 153, 453, 532, 799, 997, 1032, 1188
Sau96I GGNCC 5 cut(s) 201, 216, 586, 778, 1041
SchI GAGTC 1 cut(s) 759
ScrFI CCNGG 4 cut(s) 183, 1056, 1126, 1384
SduI GDGCHC 3 cut(s) 133, 316, 578
SfaNI GCATC 3 cut(s) 884, 906, 1350
SfcI CTRYAG 1 cut(s) 1337
Sfr274I CTCGAG 1 cut(s) 1094
SgrAI CRCCGGYG 1 cut(s) 305
SinI GGWCC 3 cut(s) 586, 778, 1041
SlaI CTCGAG 1 cut(s) 1094
SmiMI CAYNNNNRTG 5 cut(s) 136, 209, 277, 1218, 1322
SmlI CTYRAG 3 cut(s) 577, 657, 1094
SmoI CTYRAG 3 cut(s) 577, 657, 1094
SphI GCATGC 2 cut(s) 282, 403
Sse9I AATT 8 cut(s) 356, 385, 520, 738, 759, 1163, 1192, 1262
SseBI AGGCCT 1 cut(s) 181
SsiI CCGC 4 cut(s) 195, 438, 1285, 1345
SspMI CTAG 2 cut(s) 482, 590
SstI GAGCTC 1 cut(s) 578
StuI AGGCCT 1 cut(s) 181
StyD4I CCNGG 4 cut(s) 181, 1054, 1124, 1382
TaaI ACNGT 3 cut(s) 67, 1041, 1341
TaiI ACGT 1 cut(s) 1292
TaqI TCGA 3 cut(s) 936, 1095, 1187
TasI AATT 8 cut(s) 356, 385, 520, 738, 759, 1163, 1192, 1262
TatI WGTACW 1 cut(s) 376
TfiI GAWTC 4 cut(s) 172, 933, 988, 1400
Tru1I TTAA 2 cut(s) 221, 693
Tru9I TTAA 2 cut(s) 221, 693
TscAI CASTG 5 cut(s) 30, 43, 1035, 1053, 1210
TseFI GTSAC 1 cut(s) 907
TseI GCWGC 3 cut(s) 235, 706, 1368
Tsp45I GTSAC 1 cut(s) 907
TspDTI ATGAA 2 cut(s) 1274, 1340
TspGWI ACGGA 1 cut(s) 1084
TspRI CASTG 5 cut(s) 30, 43, 1035, 1053, 1210
Van91I CCANNNNNTGG 1 cut(s) 1318
VneI GTGCAC 1 cut(s) 129
VpaK11BI GGWCC 3 cut(s) 586, 778, 1041
XapI RAATTY 1 cut(s) 738
XceI RCATGY 2 cut(s) 282, 403
XcmI CCANNNNNNNNNTGG 1 cut(s) 758
XhoI CTCGAG 1 cut(s) 1094
XmiI GTMKAC 1 cut(s) 1388
XspI CTAG 2 cut(s) 482, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.