Rorug07G0116600

Gamma-glutamyl cyclotransferase, AIG2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0007085
Physical Location & Seq
Forward (+)
9082560 .. 9082898
339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0116600.1

Sequence Viewer

Length: 339 bp
ATGTTGTGTGTCGTTCCGCTTCTGGTAAAAAGTATGAGGGTGCTGCAGGTGACAATAGCAAGAGCACACTTCATGAATTGCTTGAAGAAACCAGGATTTTATTGGGATTTGGGAAGATTCTTTCTATCAGACTATGTACCATGGATGGGTTGGCTGAACAAGTTGAGTGGTCTTAAACAAAGGGCAGACAAGTGTTTTAAAGGGCTGGACAACATTTATGACAAAGTGATTGAGGAACACCGCGATTCTGAAAGGCTTAAACCAGAGCATGAAGATCTTGTTGATGTATTGCTTCGAGTTCAAAAGGATCCAAATCAAGCAATTGCCCTCACTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GGACT

Protein Analysis

112

Amino Acids

13.12

Weight (kDa)

8.82

Isoelectric Point (pI)

30.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 37
Acc36I ACCTGC 1 cut(s) 37
AccII CGCG 1 cut(s) 243
AciI CCGC 2 cut(s) 17, 241
AclWI GGATC 2 cut(s) 302, 315
AfaI GTAC 1 cut(s) 138
AfiI CCNNNNNNNGG 1 cut(s) 146
AgsI TTSAA 2 cut(s) 85, 302
AjnI CCWGG 1 cut(s) 91
Alw21I GWGCWC 1 cut(s) 67
AlwI GGATC 2 cut(s) 302, 315
ApeKI GCWGC 1 cut(s) 43
AsuHPI GGTGA 1 cut(s) 61
BamHI GGATCC 1 cut(s) 307
Bbv12I GWGCWC 1 cut(s) 67
BbvI GCAGC 1 cut(s) 30
BccI CCATC 1 cut(s) 139
BciT130I CCWGG 1 cut(s) 93
BfmI CTRYAG 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 37
BglII AGATCT 1 cut(s) 274
BisI GCNGC 1 cut(s) 44
BlsI GCNGC 1 cut(s) 45
Bme1390I CCNGG 1 cut(s) 93
BmiI GGNNCC 1 cut(s) 309
BmrFI CCNGG 1 cut(s) 93
BsaBI GATNNNNATC 1 cut(s) 312
BsaJI CCNNGG 1 cut(s) 140
Bsc4I CCNNNNNNNGG 1 cut(s) 146
Bse8I GATNNNNATC 1 cut(s) 312
BseBI CCWGG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 140
BseGI GGATG 1 cut(s) 150
BseJI GATNNNNATC 1 cut(s) 312
BseLI CCNNNNNNNGG 1 cut(s) 146
BseXI GCAGC 1 cut(s) 30
Bsh1236I CGCG 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 67
BslI CCNNNNNNNGG 1 cut(s) 146
Bsp1286I GDGCHC 1 cut(s) 67
Bsp143I GATC 2 cut(s) 274, 307
Bsp19I CCATGG 1 cut(s) 140
BspACI CCGC 2 cut(s) 17, 241
BspFNI CGCG 1 cut(s) 243
BspHI TCATGA 1 cut(s) 72
BspLI GGNNCC 1 cut(s) 309
BspMAI CTGCAG 1 cut(s) 48
BspMI ACCTGC 1 cut(s) 37
BspPI GGATC 2 cut(s) 302, 315
BssECI CCNNGG 1 cut(s) 140
BssMI GATC 2 cut(s) 274, 307
BssT1I CCWWGG 1 cut(s) 140
Bst2UI CCWGG 1 cut(s) 93
BstDSI CCRYGG 1 cut(s) 140
BstF5I GGATG 1 cut(s) 150
BstFNI CGCG 1 cut(s) 243
BstKTI GATC 2 cut(s) 277, 310
BstMBI GATC 2 cut(s) 274, 307
BstNI CCWGG 1 cut(s) 93
BstSCI CCNGG 1 cut(s) 91
BstSFI CTRYAG 1 cut(s) 44
BstUI CGCG 1 cut(s) 243
BstV1I GCAGC 1 cut(s) 30
BstX2I RGATCY 2 cut(s) 274, 307
BstYI RGATCY 2 cut(s) 274, 307
BtgI CCRYGG 1 cut(s) 140
BtsCI GGATG 1 cut(s) 150
BveI ACCTGC 1 cut(s) 37
CciI TCATGA 1 cut(s) 72
Csp6I GTAC 1 cut(s) 137
CspCI CAANNNNNGTGG 2 cut(s) 148, 183
CviAII CATG 3 cut(s) 73, 141, 269
CviJI RGCY 3 cut(s) 154, 205, 256
CviKI_1 RGCY 3 cut(s) 154, 205, 256
CviQI GTAC 1 cut(s) 137
DpnI GATC 2 cut(s) 276, 309
DpnII GATC 2 cut(s) 274, 307
DraI TTTAAA 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 91
EcoT14I CCWWGG 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 140
FaeI CATG 3 cut(s) 76, 144, 272
FaiI YATR 6 cut(s) 35, 74, 135, 142, 219, 270
FatI CATG 3 cut(s) 72, 140, 268
Fnu4HI GCNGC 1 cut(s) 44
FokI GGATG 1 cut(s) 157
Fsp4HI GCNGC 1 cut(s) 44
GluI GCNGC 1 cut(s) 44
Hin1II CATG 3 cut(s) 76, 144, 272
HinfI GANTC 2 cut(s) 117, 245
HphI GGTGA 1 cut(s) 61
Hpy188I TCNGA 2 cut(s) 130, 250
Hpy188III TCNNGA 1 cut(s) 73
HpyCH4V TGCA 1 cut(s) 46
Hsp92II CATG 3 cut(s) 76, 144, 272
Kzo9I GATC 2 cut(s) 274, 307
LpnPI CCDG 6 cut(s) 8, 32, 78, 105, 191, 276
Lsp1109I GCAGC 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 49
MalI GATC 2 cut(s) 276, 309
MboI GATC 2 cut(s) 274, 307
MboII GAAGA 3 cut(s) 97, 126, 284
MfeI CAATTG 1 cut(s) 321
MflI RGATCY 2 cut(s) 274, 307
MhlI GDGCHC 1 cut(s) 67
MluCI AATT 3 cut(s) 76, 321, 334
MnlI CCTC 3 cut(s) 30, 226, 338
MseI TTAA 4 cut(s) 174, 198, 258, 337
MspR9I CCNGG 1 cut(s) 93
MunI CAATTG 1 cut(s) 321
MvaI CCWGG 1 cut(s) 93
MvnI CGCG 1 cut(s) 243
NcoI CCATGG 1 cut(s) 140
NdeII GATC 2 cut(s) 274, 307
NlaIII CATG 3 cut(s) 76, 144, 272
NlaIV GGNNCC 1 cut(s) 309
NmuCI GTSAC 1 cut(s) 49
PagI TCATGA 1 cut(s) 72
PaqCI CACCTGC 1 cut(s) 37
PfeI GAWTC 2 cut(s) 117, 245
PkrI GCNGC 1 cut(s) 45
Psp6I CCWGG 1 cut(s) 91
PspGI CCWGG 1 cut(s) 91
PspN4I GGNNCC 1 cut(s) 309
PstI CTGCAG 1 cut(s) 48
PsuI RGATCY 2 cut(s) 274, 307
RsaI GTAC 1 cut(s) 138
RsaNI GTAC 1 cut(s) 137
SaqAI TTAA 4 cut(s) 174, 198, 258, 337
SatI GCNGC 1 cut(s) 44
Sau3AI GATC 2 cut(s) 274, 307
ScrFI CCNGG 1 cut(s) 93
SduI GDGCHC 1 cut(s) 67
SetI ASST 1 cut(s) 51
SfcI CTRYAG 1 cut(s) 44
Sse9I AATT 3 cut(s) 76, 321, 334
SsiI CCGC 2 cut(s) 17, 241
StyD4I CCNGG 1 cut(s) 91
StyI CCWWGG 1 cut(s) 140
TaqI TCGA 1 cut(s) 295
TasI AATT 3 cut(s) 76, 321, 334
TfiI GAWTC 2 cut(s) 117, 245
Tru1I TTAA 4 cut(s) 174, 198, 258, 337
Tru9I TTAA 4 cut(s) 174, 198, 258, 337
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 3 cut(s) 61, 89, 285
XcmI CCANNNNNNNNNTGG 2 cut(s) 99, 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.