Rh7BG244900

Gamma-glutamyl cyclotransferase, AIG2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0007085
Physical Location & Seq
Reverse (-)
21795582 .. 21796138
557 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG244900.1

Sequence Viewer

Length: 432 bp
ATGGCACCCAAACCATGGCTGAAACTTCCGGCGACGATTCCAAACCCCACCTCATCTTCTGCTACGGCACACTCAAGCGAGGATTCTACAACCACAAGCTCGATCACCAAGGAATTGATCGACCAAGACGACGCCGTCTTCATCGGCCCCTACATTACCCGCCACACCTACCCCCTCGTCTGCGGCCCTCACGGCATTCAGTACGTGATCAACCTCCCCGGTTCGGGTCATCGAATCAACGGCGAGCTCTACGCACTTGTGACCCAGGGGGTCGCCCGGTTCGACGAGCTAGAAGGCACCTCAGTCGGGCTCTACGAGCGGCTCACGGTACGTTGTTGGTGGTCAATTGGGACAAAGACGGCATCTTTCCGATCGAGGCCGAGGCCTATTTCGCTCACAGAAGCTTCAGTGAGGCCATTTGGGAGAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GGACT

Protein Analysis

143

Amino Acids

15.63

Weight (kDa)

8.66

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GGACT PF06094 53 - 112 2.8e-06 Gamma-glutamyl cyclotransferase, AIG2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
AccB1I GGYRCC 2 cut(s) 4, 296
AccB7I CCANNNNNTGG 1 cut(s) 15
AccBSI CCGCTC 1 cut(s) 319
AciI CCGC 3 cut(s) 160, 183, 319
AcuI CTGAAG 1 cut(s) 390
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 2 cut(s) 203, 330
AfiI CCNNNNNNNGG 4 cut(s) 15, 223, 224, 306
AjnI CCWGG 1 cut(s) 264
AluBI AGCT 4 cut(s) 99, 247, 289, 404
AluI AGCT 4 cut(s) 99, 247, 289, 404
Alw21I GWGCWC 1 cut(s) 249
AoxI GGCC 5 cut(s) 145, 184, 377, 383, 413
AspS9I GGNCC 2 cut(s) 146, 185
AsuC2I CCSGG 2 cut(s) 219, 277
AsuHPI GGTGA 1 cut(s) 97
BanI GGYRCC 2 cut(s) 4, 296
BanII GRGCYC 2 cut(s) 249, 312
BbsI GAAGAC 1 cut(s) 130
Bbv12I GWGCWC 1 cut(s) 249
BceAI ACGGC 5 cut(s) 81, 119, 208, 256, 375
BcgI CGANNNNNNTGC 2 cut(s) 286, 320
BciT130I CCWGG 1 cut(s) 266
BclI TGATCA 1 cut(s) 207
BcnI CCSGG 2 cut(s) 219, 277
BfaI CTAG 1 cut(s) 290
BglI GCCNNNNNGGC 1 cut(s) 192
BisI GCNGC 2 cut(s) 184, 320
BlsI GCNGC 2 cut(s) 185, 321
Bme1390I CCNGG 3 cut(s) 219, 266, 277
BmgT120I GGNCC 2 cut(s) 146, 185
BmiI GGNNCC 3 cut(s) 6, 148, 298
BmrFI CCNGG 3 cut(s) 219, 266, 277
BmsI GCATC 1 cut(s) 371
BpiI GAAGAC 1 cut(s) 130
BpuEI CTTGAG 1 cut(s) 58
BpuMI CCSGG 2 cut(s) 219, 277
BsaAI YACGTR 1 cut(s) 205
BsaHI GRCGYC 1 cut(s) 132
BsaJI CCNNGG 6 cut(s) 14, 108, 217, 264, 265, 380
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 223, 224, 306
BseBI CCWGG 1 cut(s) 266
BseDI CCNNGG 6 cut(s) 14, 108, 217, 264, 265, 380
BseLI CCNNNNNNNGG 4 cut(s) 15, 223, 224, 306
BseMII CTCAG 1 cut(s) 315
Bsh1285I CGRYCG 1 cut(s) 374
BshFI GGCC 5 cut(s) 147, 186, 379, 385, 415
BshNI GGYRCC 2 cut(s) 4, 296
BsiEI CGRYCG 1 cut(s) 374
BsiHKAI GWGCWC 1 cut(s) 249
BsiSI CCGG 3 cut(s) 29, 219, 277
BslFI GGGAC 1 cut(s) 364
BslI CCNNNNNNNGG 4 cut(s) 15, 223, 224, 306
BsmFI GGGAC 1 cut(s) 364
BsmI GAATGC 1 cut(s) 195
BsnI GGCC 5 cut(s) 147, 186, 379, 385, 415
Bsp1286I GDGCHC 2 cut(s) 249, 312
Bsp143I GATC 4 cut(s) 102, 117, 207, 371
Bsp19I CCATGG 1 cut(s) 14
BspACI CCGC 3 cut(s) 160, 183, 319
BspANI GGCC 5 cut(s) 147, 186, 379, 385, 415
BspCNI CTCAG 1 cut(s) 314
BspLI GGNNCC 3 cut(s) 6, 148, 298
BspT107I GGYRCC 2 cut(s) 4, 296
BsrBI CCGCTC 1 cut(s) 319
BssECI CCNNGG 6 cut(s) 14, 108, 217, 264, 265, 380
BssMI GATC 4 cut(s) 102, 117, 207, 371
BssNI GRCGYC 1 cut(s) 132
BssT1I CCWWGG 2 cut(s) 14, 108
Bst2UI CCWGG 1 cut(s) 266
Bst4CI ACNGT 1 cut(s) 328
BstACI GRCGYC 1 cut(s) 132
BstBAI YACGTR 1 cut(s) 205
BstC8I GCNNGC 1 cut(s) 245
BstDEI CTNAG 1 cut(s) 301
BstDSI CCRYGG 1 cut(s) 14
BstKTI GATC 4 cut(s) 105, 120, 210, 374
BstMBI GATC 4 cut(s) 102, 117, 207, 371
BstMCI CGRYCG 1 cut(s) 374
BstMWI GCNNNNNNNGC 3 cut(s) 192, 316, 391
BstNI CCWGG 1 cut(s) 266
BstSCI CCNGG 3 cut(s) 217, 264, 275
BstV2I GAAGAC 1 cut(s) 130
BsuRI GGCC 5 cut(s) 147, 186, 379, 385, 415
BtgI CCRYGG 1 cut(s) 14
BtsIMutI CAGTG 1 cut(s) 414
Cac8I GCNNGC 1 cut(s) 245
Cfr13I GGNCC 2 cut(s) 146, 185
CseI GACGC 1 cut(s) 140
Csp6I GTAC 2 cut(s) 202, 329
CviAII CATG 1 cut(s) 15
CviQI GTAC 2 cut(s) 202, 329
DdeI CTNAG 1 cut(s) 301
DpnI GATC 4 cut(s) 104, 119, 209, 373
DpnII GATC 4 cut(s) 102, 117, 207, 371
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
Ecl136II GAGCTC 1 cut(s) 247
Eco130I CCWWGG 2 cut(s) 14, 108
Eco147I AGGCCT 1 cut(s) 385
Eco24I GRGCYC 2 cut(s) 249, 312
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 1 cut(s) 390
EcoICRI GAGCTC 1 cut(s) 247
EcoRII CCWGG 1 cut(s) 264
EcoT14I CCWWGG 2 cut(s) 14, 108
EcoT38I GRGCYC 2 cut(s) 249, 312
ErhI CCWWGG 2 cut(s) 14, 108
FaeI CATG 1 cut(s) 18
FaiI YATR 1 cut(s) 16
FaqI GGGAC 1 cut(s) 364
FatI CATG 1 cut(s) 14
FauI CCCGC 1 cut(s) 167
FbaI TGATCA 1 cut(s) 207
Fnu4HI GCNGC 2 cut(s) 184, 320
FriOI GRGCYC 2 cut(s) 249, 312
Fsp4HI GCNGC 2 cut(s) 184, 320
FspBI CTAG 1 cut(s) 290
GluI GCNGC 2 cut(s) 184, 320
HaeIII GGCC 5 cut(s) 147, 186, 379, 385, 415
HapII CCGG 3 cut(s) 29, 219, 277
HgaI GACGC 1 cut(s) 140
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 1 cut(s) 18
HindIII AAGCTT 1 cut(s) 402
HinfI GANTC 3 cut(s) 37, 83, 234
HpaII CCGG 3 cut(s) 29, 219, 277
HphI GGTGA 1 cut(s) 97
Hpy188I TCNGA 1 cut(s) 371
Hpy99I CGWCG 3 cut(s) 37, 134, 287
HpyAV CCTTC 1 cut(s) 287
HpyCH4III ACNGT 1 cut(s) 328
HpyCH4IV ACGT 2 cut(s) 204, 331
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 316, 391
HpyF3I CTNAG 1 cut(s) 301
HpySE526I ACGT 2 cut(s) 204, 331
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 1 cut(s) 18
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 4 cut(s) 102, 117, 207, 371
LpnPI CCDG 5 cut(s) 42, 232, 251, 278, 290
LweI GCATC 1 cut(s) 371
MaeI CTAG 1 cut(s) 290
MaeII ACGT 2 cut(s) 204, 331
MaeIII GTNAC 1 cut(s) 259
MalI GATC 4 cut(s) 104, 119, 209, 373
MbiI CCGCTC 1 cut(s) 319
MboI GATC 4 cut(s) 102, 117, 207, 371
MboII GAAGA 2 cut(s) 48, 130
MfeI CAATTG 1 cut(s) 345
MhlI GDGCHC 2 cut(s) 249, 312
MluCI AATT 2 cut(s) 113, 345
MspI CCGG 3 cut(s) 29, 219, 277
MspR9I CCNGG 3 cut(s) 219, 266, 277
MunI CAATTG 1 cut(s) 345
Mva1269I GAATGC 1 cut(s) 195
MvaI CCWGG 1 cut(s) 266
MwoI GCNNNNNNNGC 3 cut(s) 192, 316, 391
NciI CCSGG 2 cut(s) 219, 277
NcoI CCATGG 1 cut(s) 14
NdeII GATC 4 cut(s) 102, 117, 207, 371
NlaIII CATG 1 cut(s) 18
NlaIV GGNNCC 3 cut(s) 6, 148, 298
NmeAIII GCCGAG 1 cut(s) 405
NmuCI GTSAC 1 cut(s) 259
PasI CCCWGGG 1 cut(s) 265
PceI AGGCCT 1 cut(s) 385
PcsI WCGNNNNNNNCGW 3 cut(s) 126, 279, 312
PctI GAATGC 1 cut(s) 195
PfeI GAWTC 3 cut(s) 37, 83, 234
PflFI GACNNNGTC 1 cut(s) 134
PflMI CCANNNNNTGG 1 cut(s) 15
PkrI GCNGC 2 cut(s) 185, 321
Ple19I CGATCG 1 cut(s) 374
Ppu21I YACGTR 1 cut(s) 205
Psp124BI GAGCTC 1 cut(s) 249
Psp6I CCWGG 1 cut(s) 264
PspGI CCWGG 1 cut(s) 264
PspN4I GGNNCC 3 cut(s) 6, 148, 298
PspPI GGNCC 2 cut(s) 146, 185
PsyI GACNNNGTC 1 cut(s) 134
PvuI CGATCG 1 cut(s) 374
RsaI GTAC 2 cut(s) 203, 330
RsaNI GTAC 2 cut(s) 202, 329
SacI GAGCTC 1 cut(s) 249
SatI GCNGC 2 cut(s) 184, 320
Sau3AI GATC 4 cut(s) 102, 117, 207, 371
Sau96I GGNCC 2 cut(s) 146, 185
ScrFI CCNGG 3 cut(s) 219, 266, 277
SduI GDGCHC 2 cut(s) 249, 312
SfaNI GCATC 1 cut(s) 371
SmlI CTYRAG 1 cut(s) 73
SmoI CTYRAG 1 cut(s) 73
Sse9I AATT 2 cut(s) 113, 345
SseBI AGGCCT 1 cut(s) 385
SsiI CCGC 3 cut(s) 160, 183, 319
SspMI CTAG 1 cut(s) 290
SstI GAGCTC 1 cut(s) 249
StuI AGGCCT 1 cut(s) 385
StyD4I CCNGG 3 cut(s) 217, 264, 275
StyI CCWWGG 2 cut(s) 14, 108
TaaI ACNGT 1 cut(s) 328
TaiI ACGT 2 cut(s) 207, 334
TaqI TCGA 5 cut(s) 101, 120, 232, 282, 374
TasI AATT 2 cut(s) 113, 345
TauI GCSGC 2 cut(s) 186, 322
TfiI GAWTC 3 cut(s) 37, 83, 234
TscAI CASTG 1 cut(s) 414
TseFI GTSAC 1 cut(s) 259
Tsp45I GTSAC 1 cut(s) 259
TspDTI ATGAA 1 cut(s) 130
TspRI CASTG 1 cut(s) 414
Tth111I GACNNNGTC 1 cut(s) 134
Van91I CCANNNNNTGG 1 cut(s) 15
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.