Rorug07G0324700

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0006218
Physical Location & Seq
Forward (+)
33687004 .. 33692258
5255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0324700.1

Sequence Viewer

Length: 1809 bp
ATGGCGCTCAAGGCTGCTGAAGCTGCTGAGGCCGCGATTGCATCAATTGGGCGTGGATATGATGTATCCATTGATCTAAGGCTCAAGTACTGCAAAGGGGACTCTCGATTGATTGAAATTGACGACGACGACGACGGGGGTCGCCAGGTTCTTCTTCCAGGTGGAATTACGATCCCCAACGTTTCCAAATCCATCAAATGCGATAAAGGAGAGCGCACGCGTTTCAGGTCCGATGTTCTCTCTTTCCAACAGATGTCAGAGCAGTTCAACCAGCAAGTTTCTTCGACCGGAAAAATACCCTCGGGTCTCTTCAATTCTATGTTTGAATTCTCAGGTTGTTGGCAGAAAGATGCAGCCAACACTAAGACCCTTGCTTTCGACGGGGTCTTCATCACGCTCTATACTGTTGCTCTCGAAAAGTCTCAGATGGTACTACGTGATGATGTTAAAAAAGCAGTCCCATCACATTGGGAACCTGCCGCATTAGCAAGGTTTATAGACACATTTGGAACGCATATAGTTGTTGGTGTGAAGATGGGAGGTAAAGATGTCATCTATATGAAGCAGCAGCATTCTTCAACTCTTCAACCAGCTGATATACAGAGAAGATTGAAGGACATGGCAGATAAAAGATTTTTAGATGCCAATGGACAGTACGGCATACCGTCTGAACAAGCTTACAAGAATGACAAGTTTGAAATCAGGGAGCAGCGGTTGCGGTTTGCAGATACTAGTCCATCAAGTTCTTATTCACACAAGGAATTGCAGGATATTGTAAGCATTCGCAAAAGGAGAGGTGGAAGTGATATTAAGAACCTATCCCATAATGAATGGTTACAAAGTGTTCAACATGAACCTGATGTGATCACAATGTCATTTATGCCAATTACCTCTCTGCTAAATGGAGTCCCAGGGAGTGGATTCTTGAGCCACGCAATAAATCTTTATTTAAGATATAAACCACCAATTGAAGAGCTCCATCAGTTTTTGGAATTTCAGCTGCCAAGGCAGTGGGCTCCGGTTTTCAGTGACCTTCCTCTTGGTCCACAAAGGAAGCATCAAAGCAATACATCTCTTCAGTTTAGCTTAATGGGGCCCAAGCTTTATGTCAATACTAGTCTGGTTGATGTAGGAAAGAGGCCAGTGACTGGTCTGCGGCTGTATCTAGAAGGCAAAAGAAGCAACCGGTTGGCCATCCACTTACAACACCTCTCCTCTCTTCCGAAAATCTTCCAACTCGAAGATGATCCAAATGGAAATTTCCGTCGTGATTCTTATGATCGTAAATACTATGAGAAAGTCCGATGGAAGAACTTCTCTCATGTATGCACTGCTCCTGTGGAGTCGGATGAGGATCTTTCAATAGTAACTGGGGCACAGTTGCAGGTTGAGAATTATGGGATAAAGAATATTCTCTTCTTGAGACTCCGCTTCTCTACCGTTTCCGGAGCTACAATTGTAAAGCATCCCGAATGGGATGGGTCACCAGGGTTGGCCCATAAGTCAGGACTCATATCAACACTAATCAGTCATCACTTTACAGCAGTTCAAAAGCCACCTCCACGACCAGCAGATGTCAACATAAACTCGGCTGTCTACCCCGGGGGTCCTCCAGTTCCCATCCAAGCGCCAAAGCTCAGGAAATTTGTGGATACAGCAGAAATGACAAGGGGGCCACAGGAAACTCCAGGTTATTGGGTTGTATCTGGGGCAAGACTAGTTGTCGAAAAGGGCAGGATATCCCTCCGTGTGAAGTATTCTTTATTGACTGTAATATTACCTGATGAAGAAGAGTTGGAGGAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Exo_endo_phos zf-C6H2

Protein Analysis

602

Amino Acids

67.66

Weight (kDa)

8.9

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MACPF PF01823 103 - 316 1.5e-40 MAC/Perforin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 484, 1375
AccB7I CCANNNNNTGG 2 cut(s) 917, 1148
AccI GTMKAC 1 cut(s) 1596
AccII CGCG 2 cut(s) 35, 220
AccIII TCCGGA 1 cut(s) 1445
AciI CCGC 6 cut(s) 33, 480, 712, 718, 1156, 1429
AclI AACGTT 1 cut(s) 180
AclWI GGATC 3 cut(s) 166, 1241, 1362
AcoI YGGCCR 1 cut(s) 1191
AcsI RAATTY 4 cut(s) 326, 992, 1258, 1643
AcuI CTGAAG 2 cut(s) 39, 1061
AfaI GTAC 3 cut(s) 89, 432, 656
AfiI CCNNNNNNNGG 2 cut(s) 917, 1148
AflIII ACRYGT 1 cut(s) 218
AgeI ACCGGT 1 cut(s) 1185
AhdI GACNNNNNGTC 1 cut(s) 1721
AhlI ACTAGT 3 cut(s) 731, 1115, 1717
AjnI CCWGG 5 cut(s) 144, 157, 910, 1486, 1687
AluBI AGCT 9 cut(s) 23, 593, 677, 976, 1000, 1086, 1102, 1451, 1636
AluI AGCT 9 cut(s) 23, 593, 677, 976, 1000, 1086, 1102, 1451, 1636
Alw21I GWGCWC 1 cut(s) 978
Alw26I GTCTC 3 cut(s) 311, 426, 1417
AlwI GGATC 3 cut(s) 166, 1241, 1362
AlwNI CAGNNNCTG 1 cut(s) 1148
Ama87I CYCGRG 2 cut(s) 301, 1601
Aor13HI TCCGGA 1 cut(s) 1445
AoxI GGCC 6 cut(s) 30, 1094, 1139, 1191, 1494, 1673
ApaI GGGCCC 1 cut(s) 1098
ApeKI GCWGC 7 cut(s) 14, 23, 353, 565, 568, 709, 1000
ApoI RAATTY 4 cut(s) 326, 992, 1258, 1643
AsiGI ACCGGT 1 cut(s) 1185
Asp700I GAANNNNTTC 2 cut(s) 1229, 1313
AspLEI GCGC 3 cut(s) 7, 216, 1630
AspS9I GGNCC 7 cut(s) 228, 1043, 1094, 1095, 1495, 1607, 1673
AsuC2I CCSGG 2 cut(s) 1602, 1603
AsuHPI GGTGA 1 cut(s) 1476
AvaI CYCGRG 2 cut(s) 301, 1601
AvaII GGWCC 3 cut(s) 228, 1043, 1607
BaeGI GKGCMC 2 cut(s) 1098, 1378
BalI TGGCCA 1 cut(s) 1193
BanII GRGCYC 3 cut(s) 978, 1018, 1098
BbsI GAAGAC 1 cut(s) 379
Bbv12I GWGCWC 1 cut(s) 978
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 6 cut(s) 10, 365, 577, 580, 721, 987
BceAI ACGGC 1 cut(s) 673
BciT130I CCWGG 5 cut(s) 146, 159, 912, 1488, 1689
BciVI GTATCC 2 cut(s) 76, 1645
BclI TGATCA 1 cut(s) 864
BcnI CCSGG 2 cut(s) 1602, 1603
BcoDI GTCTC 3 cut(s) 311, 426, 1417
BcuI ACTAGT 3 cut(s) 731, 1115, 1717
BfaI CTAG 4 cut(s) 732, 1116, 1166, 1718
BfoI RGCGCY 2 cut(s) 8, 1631
BfuAI ACCTGC 2 cut(s) 484, 1375
BfuI GTATCC 2 cut(s) 76, 1645
BmcAI AGTACT 1 cut(s) 89
Bme1390I CCNGG 7 cut(s) 146, 159, 912, 1488, 1602, 1603, 1689
Bme18I GGWCC 3 cut(s) 228, 1043, 1607
BmeRI GACNNNNNGTC 1 cut(s) 1721
BmeT110I CYCGRG 2 cut(s) 301, 1601
BmgT120I GGNCC 7 cut(s) 228, 1043, 1094, 1095, 1495, 1607, 1673
BmiI GGNNCC 6 cut(s) 474, 1017, 1095, 1096, 1608, 1674
BmrFI CCNGG 7 cut(s) 146, 159, 912, 1488, 1602, 1603, 1689
BmrI ACTGGG 1 cut(s) 1380
BmsI GCATC 5 cut(s) 50, 340, 631, 1066, 1474
BmuI ACTGGG 1 cut(s) 1380
BoxI GACNNNNGTC 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 379
BpmI CTGGAG 2 cut(s) 1596, 1671
Bpu10I CCTNAGC 2 cut(s) 27, 1637
BpuEI CTTGAG 3 cut(s) 68, 946, 1441
BpuMI CCSGG 2 cut(s) 1602, 1603
BsaAI YACGTR 1 cut(s) 437
BsaBI GATNNNNATC 1 cut(s) 1353
BsaI GGTCTC 1 cut(s) 311
BsaJI CCNNGG 8 cut(s) 300, 910, 911, 1004, 1487, 1600, 1601, 1602
BsaWI WCCGGW 4 cut(s) 287, 1018, 1185, 1445
BsaXI ACNNNNNCTCC 2 cut(s) 698, 728
Bsc4I CCNNNNNNNGG 2 cut(s) 917, 1148
Bse118I RCCGGY 1 cut(s) 1185
Bse1I ACTGG 4 cut(s) 1142, 1153, 1375, 1613
Bse8I GATNNNNATC 1 cut(s) 1353
BseAI TCCGGA 1 cut(s) 1445
BseBI CCWGG 5 cut(s) 146, 159, 912, 1488, 1689
BseDI CCNNGG 8 cut(s) 300, 910, 911, 1004, 1487, 1600, 1601, 1602
BseGI GGATG 5 cut(s) 1194, 1354, 1465, 1483, 1620
BseJI GATNNNNATC 1 cut(s) 1353
BseLI CCNNNNNNNGG 2 cut(s) 917, 1148
BseMII CTCAG 4 cut(s) 18, 345, 437, 1651
BseNI ACTGG 4 cut(s) 1142, 1153, 1375, 1613
BseRI GAGGAG 1 cut(s) 1204
BseSI GKGCMC 2 cut(s) 1098, 1378
BseXI GCAGC 6 cut(s) 10, 365, 577, 580, 721, 987
Bsh1236I CGCG 2 cut(s) 35, 220
Bsh1285I CGRYCG 1 cut(s) 288
BshFI GGCC 6 cut(s) 32, 1096, 1141, 1193, 1496, 1675
BshTI ACCGGT 1 cut(s) 1185
BsiEI CGRYCG 1 cut(s) 288
BsiHKAI GWGCWC 1 cut(s) 978
BsiHKCI CYCGRG 2 cut(s) 301, 1601
BsiSI CCGG 5 cut(s) 288, 1019, 1186, 1446, 1602
BslFI GGGAC 3 cut(s) 113, 443, 893
BslI CCNNNNNNNGG 2 cut(s) 917, 1148
BsmAI GTCTC 3 cut(s) 311, 426, 1417
BsmFI GGGAC 3 cut(s) 113, 443, 893
BsmI GAATGC 2 cut(s) 571, 780
BsnI GGCC 6 cut(s) 32, 1096, 1141, 1193, 1496, 1675
Bso31I GGTCTC 1 cut(s) 311
BsoBI CYCGRG 2 cut(s) 301, 1601
Bsp120I GGGCCC 1 cut(s) 1094
Bsp1286I GDGCHC 4 cut(s) 978, 1018, 1098, 1378
Bsp13I TCCGGA 1 cut(s) 1445
Bsp143I GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
BspACI CCGC 6 cut(s) 33, 480, 712, 718, 1156, 1429
BspANI GGCC 6 cut(s) 32, 1096, 1141, 1193, 1496, 1675
BspCNI CTCAG 4 cut(s) 19, 344, 436, 1650
BspEI TCCGGA 1 cut(s) 1445
BspFNI CGCG 2 cut(s) 35, 220
BspLI GGNNCC 6 cut(s) 474, 1017, 1095, 1096, 1608, 1674
BspMI ACCTGC 2 cut(s) 484, 1375
BspPI GGATC 3 cut(s) 166, 1241, 1362
BspQI GCTCTTC 1 cut(s) 966
BspTNI GGTCTC 1 cut(s) 311
BsrFI RCCGGY 1 cut(s) 1185
BsrI ACTGG 4 cut(s) 1142, 1153, 1375, 1613
BssAI RCCGGY 1 cut(s) 1185
BssECI CCNNGG 8 cut(s) 300, 910, 911, 1004, 1487, 1600, 1601, 1602
BssMI GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
BssT1I CCWWGG 1 cut(s) 1004
Bst2UI CCWGG 5 cut(s) 146, 159, 912, 1488, 1689
Bst4CI ACNGT 6 cut(s) 406, 654, 666, 1380, 1441, 1771
Bst6I CTCTTC 7 cut(s) 314, 588, 966, 1080, 1224, 1421, 1785
BstAPI GCANNNNNTGC 1 cut(s) 715
BstBAI YACGTR 1 cut(s) 437
BstC8I GCNNGC 1 cut(s) 218
BstDEI CTNAG 6 cut(s) 27, 77, 331, 363, 423, 1637
BstEII GGTNACC 1 cut(s) 1482
BstF5I GGATG 5 cut(s) 1194, 1354, 1465, 1483, 1620
BstFNI CGCG 2 cut(s) 35, 220
BstH2I RGCGCY 2 cut(s) 8, 1631
BstHHI GCGC 3 cut(s) 7, 216, 1630
BstKTI GATC 6 cut(s) 76, 174, 867, 1249, 1282, 1357
BstMAI GTCTC 3 cut(s) 311, 426, 1417
BstMBI GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
BstMCI CGRYCG 1 cut(s) 288
BstNI CCWGG 5 cut(s) 146, 159, 912, 1488, 1689
BstPAI GACNNNNGTC 1 cut(s) 138
BstPI GGTNACC 1 cut(s) 1482
BstSCI CCNGG 7 cut(s) 144, 157, 910, 1486, 1600, 1601, 1687
BstSLI GKGCMC 2 cut(s) 1098, 1378
BstUI CGCG 2 cut(s) 35, 220
BstV1I GCAGC 6 cut(s) 10, 365, 577, 580, 721, 987
BstV2I GAAGAC 1 cut(s) 379
BstX2I RGATCY 1 cut(s) 1354
BstXI CCANNNNNNTGG 3 cut(s) 468, 1011, 1695
BstYI RGATCY 1 cut(s) 1354
BsuI GTATCC 2 cut(s) 76, 1645
BsuRI GGCC 6 cut(s) 32, 1096, 1141, 1193, 1496, 1675
BtsCI GGATG 5 cut(s) 1194, 1354, 1465, 1483, 1620
BtsI GCAGTG 2 cut(s) 1016, 1329
BtsIMutI CAGTG 4 cut(s) 1016, 1033, 1149, 1329
BveI ACCTGC 2 cut(s) 484, 1375
Cac8I GCNNGC 1 cut(s) 218
CaiI CAGNNNCTG 1 cut(s) 1148
CfoI GCGC 3 cut(s) 7, 216, 1630
Cfr10I RCCGGY 1 cut(s) 1185
Cfr13I GGNCC 7 cut(s) 228, 1043, 1094, 1095, 1495, 1607, 1673
Cfr9I CCCGGG 1 cut(s) 1601
Csp6I GTAC 3 cut(s) 88, 431, 655
CspAI ACCGGT 1 cut(s) 1185
CviAII CATG 3 cut(s) 619, 851, 1322
CviQI GTAC 3 cut(s) 88, 431, 655
DdeI CTNAG 6 cut(s) 27, 77, 331, 363, 423, 1637
DpnI GATC 6 cut(s) 75, 173, 866, 1248, 1281, 1356
DpnII GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
DriI GACNNNNNGTC 1 cut(s) 1721
EaeI YGGCCR 1 cut(s) 1191
Eam1104I CTCTTC 7 cut(s) 314, 588, 966, 1080, 1224, 1421, 1785
Eam1105I GACNNNNNGTC 1 cut(s) 1721
EarI CTCTTC 7 cut(s) 314, 588, 966, 1080, 1224, 1421, 1785
Ecl136II GAGCTC 1 cut(s) 976
Eco130I CCWWGG 1 cut(s) 1004
Eco24I GRGCYC 3 cut(s) 978, 1018, 1098
Eco31I GGTCTC 1 cut(s) 311
Eco32I GATATC 1 cut(s) 1740
Eco47I GGWCC 3 cut(s) 228, 1043, 1607
Eco53kI GAGCTC 1 cut(s) 976
Eco57I CTGAAG 2 cut(s) 39, 1061
Eco88I CYCGRG 2 cut(s) 301, 1601
Eco91I GGTNACC 1 cut(s) 1482
EcoICRI GAGCTC 1 cut(s) 976
EcoO109I RGGNCCY 2 cut(s) 1094, 1607
EcoO65I GGTNACC 1 cut(s) 1482
EcoRI GAATTC 1 cut(s) 326
EcoRII CCWGG 5 cut(s) 144, 157, 910, 1486, 1687
EcoRV GATATC 1 cut(s) 1740
EcoT14I CCWWGG 1 cut(s) 1004
EcoT38I GRGCYC 3 cut(s) 978, 1018, 1098
ErhI CCWWGG 1 cut(s) 1004
FaeI CATG 3 cut(s) 622, 854, 1325
FaqI GGGAC 3 cut(s) 113, 443, 893
FatI CATG 3 cut(s) 618, 850, 1321
FbaI TGATCA 1 cut(s) 864
FblI GTMKAC 1 cut(s) 1596
FokI GGATG 5 cut(s) 1181, 1361, 1452, 1490, 1607
FriOI GRGCYC 3 cut(s) 978, 1018, 1098
FspBI CTAG 4 cut(s) 732, 1116, 1166, 1718
GlaI GCGC 3 cut(s) 6, 215, 1629
GsuI CTGGAG 2 cut(s) 1596, 1671
HaeII RGCGCY 2 cut(s) 8, 1631
HaeIII GGCC 6 cut(s) 32, 1096, 1141, 1193, 1496, 1675
HapII CCGG 5 cut(s) 288, 1019, 1186, 1446, 1602
HhaI GCGC 3 cut(s) 7, 216, 1630
Hin1II CATG 3 cut(s) 622, 854, 1325
Hin6I GCGC 3 cut(s) 5, 214, 1628
HinP1I GCGC 3 cut(s) 5, 214, 1628
HincII GTYRAC 1 cut(s) 1579
HindII GTYRAC 1 cut(s) 1579
HindIII AAGCTT 2 cut(s) 675, 1100
HinfI GANTC 7 cut(s) 101, 906, 921, 1271, 1343, 1425, 1509
HpaII CCGG 5 cut(s) 288, 1019, 1186, 1446, 1602
HphI GGTGA 1 cut(s) 1476
Hpy166II GTNNAC 3 cut(s) 1046, 1579, 1597
Hpy188I TCNGA 7 cut(s) 232, 259, 426, 670, 1224, 1304, 1348
Hpy8I GTNNAC 3 cut(s) 1046, 1579, 1597
Hpy99I CGWCG 6 cut(s) 128, 131, 134, 137, 383, 1269
HpyAV CCTTC 3 cut(s) 607, 1043, 1163
HpyCH4III ACNGT 6 cut(s) 406, 654, 666, 1380, 1441, 1771
HpyCH4IV ACGT 2 cut(s) 180, 436
HpyCH4V TGCA 7 cut(s) 41, 93, 353, 725, 766, 1329, 1384
HpyF3I CTNAG 6 cut(s) 27, 77, 331, 363, 423, 1637
HpySE526I ACGT 2 cut(s) 180, 436
Hsp92II CATG 3 cut(s) 622, 854, 1325
HspAI GCGC 3 cut(s) 5, 214, 1628
Kpn2I TCCGGA 1 cut(s) 1445
Ksp22I TGATCA 1 cut(s) 864
Kzo9I GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
LguI GCTCTTC 1 cut(s) 966
LmnI GCTCC 5 cut(s) 706, 981, 1021, 1339, 1448
Lsp1109I GCAGC 6 cut(s) 10, 365, 577, 580, 721, 987
LweI GCATC 5 cut(s) 50, 340, 631, 1066, 1474
MaeI CTAG 4 cut(s) 732, 1116, 1166, 1718
MaeII ACGT 2 cut(s) 180, 436
MaeIII GTNAC 5 cut(s) 834, 1028, 1144, 1366, 1482
MalI GATC 6 cut(s) 75, 173, 866, 1248, 1281, 1356
MboI GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
MfeI CAATTG 3 cut(s) 45, 966, 1455
MflI RGATCY 1 cut(s) 1354
MhlI GDGCHC 4 cut(s) 978, 1018, 1098, 1378
MlsI TGGCCA 1 cut(s) 1193
MluI ACGCGT 1 cut(s) 218
MluNI TGGCCA 1 cut(s) 1193
MlyI GAGTC 5 cut(s) 95, 915, 1352, 1419, 1503
MmeI TCCRAC 4 cut(s) 271, 1258, 1326, 1776
Mox20I TGGCCA 1 cut(s) 1193
MroI TCCGGA 1 cut(s) 1445
MroXI GAANNNNTTC 2 cut(s) 1229, 1313
MscI TGGCCA 1 cut(s) 1193
MseI TTAA 4 cut(s) 447, 810, 950, 1088
MslI CAYNNNNRTG 1 cut(s) 557
Msp20I TGGCCA 1 cut(s) 1193
MspA1I CMGCKG 3 cut(s) 593, 712, 1000
MspI CCGG 5 cut(s) 288, 1019, 1186, 1446, 1602
MspR9I CCNGG 7 cut(s) 146, 159, 912, 1488, 1602, 1603, 1689
MunI CAATTG 3 cut(s) 45, 966, 1455
Mva1269I GAATGC 2 cut(s) 571, 780
MvaI CCWGG 5 cut(s) 146, 159, 912, 1488, 1689
MvnI CGCG 2 cut(s) 35, 220
NciI CCSGG 2 cut(s) 1602, 1603
NdeII GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
NlaIII CATG 3 cut(s) 622, 854, 1325
NlaIV GGNNCC 6 cut(s) 474, 1017, 1095, 1096, 1608, 1674
NmeAIII GCCGAG 1 cut(s) 1568
NmuCI GTSAC 3 cut(s) 1028, 1144, 1482
PasI CCCWGGG 1 cut(s) 911
PciSI GCTCTTC 1 cut(s) 966
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 2 cut(s) 571, 780
PdmI GAANNNNTTC 2 cut(s) 1229, 1313
PfeI GAWTC 2 cut(s) 921, 1271
PflFI GACNNNGTC 1 cut(s) 383
PflMI CCANNNNNTGG 2 cut(s) 917, 1148
PinAI ACCGGT 1 cut(s) 1185
PleI GAGTC 5 cut(s) 95, 914, 1351, 1419, 1503
PpsI GAGTC 5 cut(s) 95, 914, 1351, 1419, 1503
Ppu21I YACGTR 1 cut(s) 437
PpuMI RGGWCCY 1 cut(s) 1607
PshAI GACNNNNGTC 1 cut(s) 138
Psp124BI GAGCTC 1 cut(s) 978
Psp1406I AACGTT 1 cut(s) 180
Psp5II RGGWCCY 1 cut(s) 1607
Psp6I CCWGG 5 cut(s) 144, 157, 910, 1486, 1687
PspEI GGTNACC 1 cut(s) 1482
PspGI CCWGG 5 cut(s) 144, 157, 910, 1486, 1687
PspN4I GGNNCC 6 cut(s) 474, 1017, 1095, 1096, 1608, 1674
PspOMI GGGCCC 1 cut(s) 1094
PspPI GGNCC 7 cut(s) 228, 1043, 1094, 1095, 1495, 1607, 1673
PspPPI RGGWCCY 1 cut(s) 1607
PstNI CAGNNNCTG 1 cut(s) 1148
PsuI RGATCY 1 cut(s) 1354
PsyI GACNNNGTC 1 cut(s) 383
PvuII CAGCTG 2 cut(s) 593, 1000
RsaI GTAC 3 cut(s) 89, 432, 656
RsaNI GTAC 3 cut(s) 88, 431, 655
RseI CAYNNNNRTG 1 cut(s) 557
SacI GAGCTC 1 cut(s) 978
SapI GCTCTTC 1 cut(s) 966
SaqAI TTAA 4 cut(s) 447, 810, 950, 1088
Sau3AI GATC 6 cut(s) 73, 171, 864, 1246, 1279, 1354
Sau96I GGNCC 7 cut(s) 228, 1043, 1094, 1095, 1495, 1607, 1673
ScaI AGTACT 1 cut(s) 89
SchI GAGTC 5 cut(s) 95, 915, 1352, 1419, 1503
ScrFI CCNGG 7 cut(s) 146, 159, 912, 1488, 1602, 1603, 1689
SduI GDGCHC 4 cut(s) 978, 1018, 1098, 1378
SfaNI GCATC 5 cut(s) 50, 340, 631, 1066, 1474
SinI GGWCC 3 cut(s) 228, 1043, 1607
SmaI CCCGGG 1 cut(s) 1603
SmiMI CAYNNNNRTG 1 cut(s) 557
SmlI CTYRAG 4 cut(s) 8, 83, 925, 1420
SmoI CTYRAG 4 cut(s) 8, 83, 925, 1420
SpeI ACTAGT 3 cut(s) 731, 1115, 1717
SsiI CCGC 6 cut(s) 33, 480, 712, 718, 1156, 1429
SspI AATATT 2 cut(s) 1411, 1776
SspMI CTAG 4 cut(s) 732, 1116, 1166, 1718
SstI GAGCTC 1 cut(s) 978
StyD4I CCNGG 7 cut(s) 144, 157, 910, 1486, 1600, 1601, 1687
StyI CCWWGG 1 cut(s) 1004
TaaI ACNGT 6 cut(s) 406, 654, 666, 1380, 1441, 1771
TaiI ACGT 2 cut(s) 183, 439
TaqI TCGA 6 cut(s) 106, 284, 378, 414, 1239, 1725
TatI WGTACW 1 cut(s) 87
TauI GCSGC 3 cut(s) 35, 482, 1159
TfiI GAWTC 2 cut(s) 921, 1271
Tru1I TTAA 4 cut(s) 447, 810, 950, 1088
Tru9I TTAA 4 cut(s) 447, 810, 950, 1088
TscAI CASTG 4 cut(s) 1016, 1033, 1149, 1336
TseFI GTSAC 3 cut(s) 1028, 1144, 1482
TseI GCWGC 7 cut(s) 14, 23, 353, 565, 568, 709, 1000
Tsp45I GTSAC 3 cut(s) 1028, 1144, 1482
TspDTI ATGAA 5 cut(s) 379, 575, 843, 867, 1800
TspGWI ACGGA 2 cut(s) 1253, 1736
TspMI CCCGGG 1 cut(s) 1601
TspRI CASTG 4 cut(s) 1016, 1033, 1149, 1336
Tth111I GACNNNGTC 1 cut(s) 383
Van91I CCANNNNNTGG 2 cut(s) 917, 1148
VpaK11BI GGWCC 3 cut(s) 228, 1043, 1607
XapI RAATTY 4 cut(s) 326, 992, 1258, 1643
XbaI TCTAGA 1 cut(s) 1165
XmaI CCCGGG 1 cut(s) 1601
XmiI GTMKAC 1 cut(s) 1596
XmnI GAANNNNTTC 2 cut(s) 1229, 1313
XspI CTAG 4 cut(s) 732, 1116, 1166, 1718
ZrmI AGTACT 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.