Rh1AG003500

Protein N-terminal asparagine

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0005345
Physical Location & Seq
Forward (+)
490607 .. 493370
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG003500.1

Sequence Viewer

Length: 1053 bp
ATGGGAATCATCATGATCTTTGTCGGTGGACTTCCTTTCCCTTCCGAATCATCTTCATCGCCTCAGCCTCAGGGATGGGACACCCTCCAAGCTTTGTTGGATCACCCGTTTTTGGAATCTGCCTCCAGTACGTTCAAGGCCATCCCGGAGAGGAAGTTCTCGGTGCCCCAAGAATCAGAATCAGAGAGGAGATGGGTTTATCTCTTCCAAAGAGAATATGCAACTGTTGATCCTGCATATGTCGATTTTGTTGGCACTGATGAAGCAACAACCTGTATGGGTCTTGCCATCCGTAACCCGGAAACTGGAATGACGTCCGTTGCCCATTTAGACTCTCCAAAAGTTGTGGATATGGGTCTCTCCCAGATGGTGTCACTACTAGTTCAACCCAATAAGGACGTGGAGTTGGATGTGCATCTAGTTGGTGGTTTTGAAGATGTTTCACCTAATCATGGTAACTGTAATACTAGATCAGAAAATCAGGCAAACTTGGATGGTTATTCCTTTCCTTTAGCTGCCAAAATTGTTGAAACATTATGCAAGAGCCGGGAGAGATTTCATATTCGAACTCTATGCATTCTTCGGCATAACACCAGAAGGGATCCCGAGGGAAATGCATACCCAATTTTCAACGGGTTCATGGTAAGCACTTCCACGGGATCTATTATTCCTGCCAGCTTTGACGAAACCTCAAGATGTCCTGCTGAAATTGTCAGGAGAATTAGAGTTTCTGCATCTTATGAGGACTCTAGATGGAAAGGAAGGTTATTGGAAACATATGAAACTCAAACTGATCTTTTCAAAATAGCTCCATGCTGCTGGAGCCTATATCAGTTGCATATTGCGTTGTCCCTACAAAATTATTCAGATTCGGAAATCCTCCTTATGTGTTCTACTTCACCCTCTGCTGAGGCACCGGATTTTGTGAAAAATCTTAGAAGGGTGTGGGACTACTTGATTGAGTACCCAGATTGGAGAGAAACCTTTCCTATGGAGCAGCCACGCGTATTTCAGAGGACTGCTGAGGGAGGCTGGAAAGCCAAAAGGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
N_Asn_amidohyd

Protein Analysis

350

Amino Acids

39.65

Weight (kDa)

5.3

Isoelectric Point (pI)

58.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
N_Asn_amidohyd PF14736 57 - 346 3.8e-86 Protein N-terminal asparagine amidohydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 317
AccB1I GGYRCC 2 cut(s) 163, 913
AccII CGCG 1 cut(s) 1005
AclWI GGATC 5 cut(s) 108, 224, 596, 609, 667
AcyI GRCGYC 1 cut(s) 314
AfaI GTAC 2 cut(s) 130, 965
AfiI CCNNNNNNNGG 4 cut(s) 112, 298, 305, 452
AflIII ACRYGT 1 cut(s) 1003
AgsI TTSAA 6 cut(s) 136, 386, 434, 530, 631, 802
AhlI ACTAGT 1 cut(s) 379
AjiI CACGTC 1 cut(s) 400
AloI GAACNNNNNNTCC 2 cut(s) 140, 172
AluBI AGCT 4 cut(s) 92, 515, 678, 809
AluI AGCT 4 cut(s) 92, 515, 678, 809
Alw26I GTCTC 1 cut(s) 362
AlwI GGATC 5 cut(s) 108, 224, 596, 609, 667
Ama87I CYCGRG 1 cut(s) 605
AoxI GGCC 1 cut(s) 138
ApeKI GCWGC 3 cut(s) 515, 816, 997
Asp700I GAANNNNTTC 1 cut(s) 984
AsuC2I CCSGG 3 cut(s) 146, 299, 548
AsuHPI GGTGA 3 cut(s) 95, 435, 891
AsuII TTCGAA 1 cut(s) 565
AvaI CYCGRG 1 cut(s) 605
AxyI CCTNAGG 1 cut(s) 69
BaeGI GKGCMC 1 cut(s) 168
BamHI GGATCC 1 cut(s) 601
BanI GGYRCC 2 cut(s) 163, 913
BbvCI CCTCAGC 3 cut(s) 63, 909, 1023
BbvI GCAGC 3 cut(s) 502, 803, 1009
BccI CCATC 7 cut(s) 69, 149, 186, 296, 361, 488, 747
BcgI CGANNNNNNTGC 4 cut(s) 555, 589, 596, 630
BcnI CCSGG 3 cut(s) 146, 299, 548
BcoDI GTCTC 1 cut(s) 362
BcuI ACTAGT 1 cut(s) 379
BfaI CTAG 4 cut(s) 380, 419, 468, 750
BisI GCNGC 3 cut(s) 516, 817, 998
BlsI GCNGC 3 cut(s) 517, 818, 999
Bme1390I CCNGG 3 cut(s) 146, 299, 548
BmeT110I CYCGRG 1 cut(s) 605
BmgBI CACGTC 1 cut(s) 400
BmiI GGNNCC 4 cut(s) 165, 603, 824, 915
BmrFI CCNGG 3 cut(s) 146, 299, 548
BmsI GCATC 2 cut(s) 424, 743
BpmI CTGGAG 2 cut(s) 109, 841
Bpu10I CCTNAGC 3 cut(s) 63, 909, 1023
Bpu14I TTCGAA 1 cut(s) 565
BpuEI CTTGAG 1 cut(s) 676
BpuMI CCSGG 3 cut(s) 146, 299, 548
BsaBI GATNNNNATC 1 cut(s) 414
BsaHI GRCGYC 1 cut(s) 314
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 2 cut(s) 606, 654
BsaWI WCCGGW 1 cut(s) 916
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 4 cut(s) 112, 298, 305, 452
Bse1I ACTGG 2 cut(s) 126, 310
Bse21I CCTNAGG 1 cut(s) 69
Bse8I GATNNNNATC 1 cut(s) 414
BseDI CCNNGG 2 cut(s) 606, 654
BseGI GGATG 5 cut(s) 80, 141, 288, 415, 499
BseJI GATNNNNATC 1 cut(s) 414
BseLI CCNNNNNNNGG 4 cut(s) 112, 298, 305, 452
BseMII CTCAG 4 cut(s) 77, 83, 900, 1014
BseNI ACTGG 2 cut(s) 126, 310
BseRI GAGGAG 1 cut(s) 202
BseSI GKGCMC 1 cut(s) 168
BseXI GCAGC 3 cut(s) 502, 803, 1009
Bsh1236I CGCG 1 cut(s) 1005
BshFI GGCC 1 cut(s) 140
BshNI GGYRCC 2 cut(s) 163, 913
BsiHKCI CYCGRG 1 cut(s) 605
BsiSI CCGG 4 cut(s) 146, 299, 547, 917
BslFI GGGAC 3 cut(s) 92, 835, 962
BslI CCNNNNNNNGG 4 cut(s) 112, 298, 305, 452
BsmAI GTCTC 1 cut(s) 362
BsmFI GGGAC 3 cut(s) 92, 835, 962
BsmI GAATGC 1 cut(s) 576
BsnI GGCC 1 cut(s) 140
Bso31I GGTCTC 1 cut(s) 362
BsoBI CYCGRG 1 cut(s) 605
Bsp119I TTCGAA 1 cut(s) 565
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
BspANI GGCC 1 cut(s) 140
BspCNI CTCAG 4 cut(s) 76, 82, 901, 1015
BspFNI CGCG 1 cut(s) 1005
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 4 cut(s) 165, 603, 824, 915
BspPI GGATC 5 cut(s) 108, 224, 596, 609, 667
BspT104I TTCGAA 1 cut(s) 565
BspT107I GGYRCC 2 cut(s) 163, 913
BspTNI GGTCTC 1 cut(s) 362
BsrI ACTGG 2 cut(s) 126, 310
BssECI CCNNGG 2 cut(s) 606, 654
BssMI GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
BssNI GRCGYC 1 cut(s) 314
Bst4CI ACNGT 2 cut(s) 226, 461
Bst6I CTCTTC 1 cut(s) 209
BstACI GRCGYC 1 cut(s) 314
BstBI TTCGAA 1 cut(s) 565
BstC8I GCNNGC 1 cut(s) 676
BstDEI CTNAG 5 cut(s) 63, 69, 909, 935, 1023
BstDSI CCRYGG 1 cut(s) 654
BstF5I GGATG 5 cut(s) 80, 141, 288, 415, 499
BstFNI CGCG 1 cut(s) 1005
BstKTI GATC 7 cut(s) 18, 103, 232, 473, 604, 662, 796
BstMAI GTCTC 1 cut(s) 362
BstMBI GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
BstMWI GCNNNNNNNGC 1 cut(s) 822
BstSCI CCNGG 3 cut(s) 144, 297, 546
BstSLI GKGCMC 1 cut(s) 168
BstUI CGCG 1 cut(s) 1005
BstV1I GCAGC 3 cut(s) 502, 803, 1009
BstX2I RGATCY 2 cut(s) 601, 659
BstXI CCANNNNNNTGG 1 cut(s) 819
BstYI RGATCY 2 cut(s) 601, 659
Bsu36I CCTNAGG 1 cut(s) 69
BsuRI GGCC 1 cut(s) 140
BtgI CCRYGG 1 cut(s) 654
BtgZI GCGATG 1 cut(s) 42
BtrI CACGTC 1 cut(s) 400
BtsCI GGATG 5 cut(s) 80, 141, 288, 415, 499
BtsIMutI CAGTG 1 cut(s) 255
Cac8I GCNNGC 1 cut(s) 676
CciI TCATGA 1 cut(s) 12
Csp6I GTAC 2 cut(s) 129, 964
CspCI CAANNNNNGTGG 2 cut(s) 327, 362
CviAII CATG 4 cut(s) 13, 452, 640, 813
CviQI GTAC 2 cut(s) 129, 964
DdeI CTNAG 5 cut(s) 63, 69, 909, 935, 1023
DpnI GATC 7 cut(s) 17, 102, 231, 472, 603, 661, 795
DpnII GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
Eam1104I CTCTTC 1 cut(s) 209
EarI CTCTTC 1 cut(s) 209
Eco31I GGTCTC 1 cut(s) 362
Eco81I CCTNAGG 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 605
EcoT22I ATGCAT 2 cut(s) 578, 619
FaeI CATG 4 cut(s) 16, 455, 643, 816
FaqI GGGAC 3 cut(s) 92, 835, 962
FatI CATG 4 cut(s) 12, 451, 639, 812
FauNDI CATATG 2 cut(s) 238, 778
Fnu4HI GCNGC 3 cut(s) 516, 817, 998
FokI GGATG 5 cut(s) 87, 128, 275, 422, 506
Fsp4HI GCNGC 3 cut(s) 516, 817, 998
FspBI CTAG 4 cut(s) 380, 419, 468, 750
GluI GCNGC 3 cut(s) 516, 817, 998
GsuI CTGGAG 2 cut(s) 109, 841
HaeIII GGCC 1 cut(s) 140
HapII CCGG 4 cut(s) 146, 299, 547, 917
Hin1I GRCGYC 1 cut(s) 314
Hin1II CATG 4 cut(s) 16, 455, 643, 816
HindIII AAGCTT 1 cut(s) 90
HinfI GANTC 8 cut(s) 6, 47, 116, 173, 179, 332, 746, 869
HpaII CCGG 4 cut(s) 146, 299, 547, 917
HphI GGTGA 3 cut(s) 95, 435, 891
Hpy166II GTNNAC 1 cut(s) 29
Hpy188I TCNGA 7 cut(s) 46, 178, 184, 475, 868, 874, 1014
Hpy188III TCNNGA 5 cut(s) 13, 605, 693, 715, 750
Hpy8I GTNNAC 1 cut(s) 29
HpyAV CCTTC 4 cut(s) 51, 591, 756, 933
HpyCH4III ACNGT 2 cut(s) 226, 461
HpyCH4IV ACGT 3 cut(s) 131, 314, 399
HpyCH4V TGCA 8 cut(s) 221, 236, 415, 540, 576, 617, 734, 838
HpyF10VI GCNNNNNNNGC 1 cut(s) 822
HpyF3I CTNAG 5 cut(s) 63, 69, 909, 935, 1023
HpySE526I ACGT 3 cut(s) 131, 314, 399
Hsp92I GRCGYC 1 cut(s) 314
Hsp92II CATG 4 cut(s) 16, 455, 643, 816
Kzo9I GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
LmnI GCTCC 3 cut(s) 814, 822, 994
Lsp1109I GCAGC 3 cut(s) 502, 803, 1009
LweI GCATC 2 cut(s) 424, 743
MaeI CTAG 4 cut(s) 380, 419, 468, 750
MaeII ACGT 3 cut(s) 131, 314, 399
MaeIII GTNAC 3 cut(s) 293, 372, 455
MalI GATC 7 cut(s) 17, 102, 231, 472, 603, 661, 795
MboI GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
MboII GAAGA 4 cut(s) 45, 196, 446, 572
MflI RGATCY 2 cut(s) 601, 659
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 5 cut(s) 522, 624, 708, 720, 859
MluI ACGCGT 1 cut(s) 1003
MlyI GAGTC 2 cut(s) 326, 740
MmeI TCCRAC 2 cut(s) 78, 387
Mph1103I ATGCAT 2 cut(s) 578, 619
MroXI GAANNNNTTC 1 cut(s) 984
MspI CCGG 4 cut(s) 146, 299, 547, 917
MspR9I CCNGG 3 cut(s) 146, 299, 548
Mva1269I GAATGC 1 cut(s) 576
MvnI CGCG 1 cut(s) 1005
MwoI GCNNNNNNNGC 1 cut(s) 822
NciI CCSGG 3 cut(s) 146, 299, 548
NdeI CATATG 2 cut(s) 238, 778
NdeII GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
NlaIII CATG 4 cut(s) 16, 455, 643, 816
NlaIV GGNNCC 4 cut(s) 165, 603, 824, 915
NmuCI GTSAC 1 cut(s) 372
NsiI ATGCAT 2 cut(s) 578, 619
NspV TTCGAA 1 cut(s) 565
PagI TCATGA 1 cut(s) 12
PctI GAATGC 1 cut(s) 576
PdmI GAANNNNTTC 1 cut(s) 984
PfeI GAWTC 6 cut(s) 6, 47, 116, 173, 179, 869
PfoI TCCNGGA 1 cut(s) 144
PkrI GCNGC 3 cut(s) 517, 818, 999
PleI GAGTC 2 cut(s) 326, 740
PpsI GAGTC 2 cut(s) 326, 740
PspN4I GGNNCC 4 cut(s) 165, 603, 824, 915
PsuI RGATCY 2 cut(s) 601, 659
RsaI GTAC 2 cut(s) 130, 965
RsaNI GTAC 2 cut(s) 129, 964
SatI GCNGC 3 cut(s) 516, 817, 998
Sau3AI GATC 7 cut(s) 15, 100, 229, 470, 601, 659, 793
SchI GAGTC 2 cut(s) 326, 740
ScrFI CCNGG 3 cut(s) 146, 299, 548
SduI GDGCHC 1 cut(s) 168
SfaNI GCATC 2 cut(s) 424, 743
SfuI TTCGAA 1 cut(s) 565
SmlI CTYRAG 1 cut(s) 691
SmoI CTYRAG 1 cut(s) 691
SpeI ACTAGT 1 cut(s) 379
Sse9I AATT 5 cut(s) 522, 624, 708, 720, 859
SspMI CTAG 4 cut(s) 380, 419, 468, 750
StyD4I CCNGG 3 cut(s) 144, 297, 546
TaaI ACNGT 2 cut(s) 226, 461
TaiI ACGT 3 cut(s) 134, 317, 402
TaqI TCGA 2 cut(s) 243, 565
TasI AATT 5 cut(s) 522, 624, 708, 720, 859
TfiI GAWTC 6 cut(s) 6, 47, 116, 173, 179, 869
TscAI CASTG 1 cut(s) 262
TseFI GTSAC 1 cut(s) 372
TseI GCWGC 3 cut(s) 515, 816, 997
Tsp45I GTSAC 1 cut(s) 372
TspDTI ATGAA 5 cut(s) 45, 276, 548, 628, 795
TspGWI ACGGA 2 cut(s) 281, 307
TspRI CASTG 1 cut(s) 262
XbaI TCTAGA 1 cut(s) 749
XcmI CCANNNNNNNNNTGG 1 cut(s) 397
XmnI GAANNNNTTC 1 cut(s) 984
XspI CTAG 4 cut(s) 380, 419, 468, 750
ZraI GACGTC 1 cut(s) 315
Zsp2I ATGCAT 2 cut(s) 578, 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.