Rh1CG001200

Protein N-terminal asparagine

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0005345
Physical Location & Seq
Reverse (-)
117949 .. 120908
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG001200.1

Sequence Viewer

Length: 1047 bp
ATGATCTTTGTAGGTGGACTTCCTTTCCCTTCCGAATCATCTTCATCGCCTCAGCCTCAGGGATGGGACACCCTCCAAGCTTTGTTGGATCACCCGTTTTTGGAATCTGCCTCCAGTACATTCAAGGCCATCCCGGAGAGGAAGTTCTCGGTGCCCCAAGAATCAGAATCAGAATCAGAGAGGAGATGGGTTTATCTCTTCCAAAGAGAATATGCAACTGTTGATCCTGCATATGTCGATTTTGTTGGCACTGATGAAGCAACAACCTGTATGGGTCTTGCCATCCGTAACCCGGAAACTGGAATGACGTCGGTTGCCCATTTAGACTCTCCAAAAGTTGTGGATATGGGTCTCTCCCAGATGGTGTCACTACTAGTTCAACACAATAAGGACGTGGAATTGGATGTGCATCTAGTTGGTGGTTTTGAAGATGTTTCACCTAATCATGGTAACTGTAATACTAGATCAGAAAATCAGGCAAAGTTGGATGGTTATTCCTTTCCTTTAGCTGCCAAAATTGTTGAAACATTATGCAAGAGCCGGGAGAGATTTCATATTCGAACTCTATGCATTCTTGGGCATAACACCAGAAGGGATCCCGAGGGAAATGCATACCCAATTTTCAACGGGTTCATGGTAAGCACTTCCACGGGATCTATTATTCCTGCCAGCTTTGACGAAACCTCAAGATGTCCTGATGAAATTGTCAGGAGAATTAGAGTTTCTGCATCTTATGAGGACTCCAGATGGAAAGGAAGGTTATTGGAAACATATGAAACTCAAACTGATCTTTTCAAAATAGCTCCATGCTGCTGGAGCCTACGTCAGTTGCATATTGCATTTTCCCTACAAAATTATTCAGATTCAGAAATCCTCCATACGTGGTCTACTTCACCCTCAGCTGAGGCACCGGATTTTGTGAAAAATCATAGAAGGGTGTGGGACTACTTGATTGAGTACCCAGATTGGAGAGAAACCTTTCCTATGGAGCAGCCACGCGTATTTCAGAGGACTGCTGAGGGAGGCTGGAAAGCCAAAAGGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
N_Asn_amidohyd

Protein Analysis

348

Amino Acids

39.58

Weight (kDa)

5.44

Isoelectric Point (pI)

58.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
N_Asn_amidohyd PF14736 55 - 344 1.7e-86 Protein N-terminal asparagine amidohydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 311
AccB1I GGYRCC 2 cut(s) 151, 907
AccI GTMKAC 1 cut(s) 887
AccII CGCG 1 cut(s) 999
AclWI GGATC 5 cut(s) 96, 218, 590, 603, 661
AcyI GRCGYC 1 cut(s) 308
AfaI GTAC 2 cut(s) 118, 959
AfiI CCNNNNNNNGG 4 cut(s) 100, 292, 299, 446
AflIII ACRYGT 1 cut(s) 997
AgsI TTSAA 6 cut(s) 124, 380, 428, 524, 625, 796
AhlI ACTAGT 1 cut(s) 373
AjiI CACGTC 1 cut(s) 394
AloI GAACNNNNNNTCC 2 cut(s) 128, 160
AluBI AGCT 5 cut(s) 80, 509, 672, 803, 902
AluI AGCT 5 cut(s) 80, 509, 672, 803, 902
Alw26I GTCTC 1 cut(s) 356
AlwI GGATC 5 cut(s) 96, 218, 590, 603, 661
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 1 cut(s) 126
ApeKI GCWGC 3 cut(s) 509, 810, 991
Asp700I GAANNNNTTC 1 cut(s) 978
AsuC2I CCSGG 3 cut(s) 134, 293, 542
AsuHPI GGTGA 3 cut(s) 83, 429, 885
AsuII TTCGAA 1 cut(s) 559
AvaI CYCGRG 1 cut(s) 599
AxyI CCTNAGG 1 cut(s) 57
BaeGI GKGCMC 1 cut(s) 156
BamHI GGATCC 1 cut(s) 595
BanI GGYRCC 2 cut(s) 151, 907
BarI GAAGNNNNNNTAC 1 cut(s) 35
BbvCI CCTCAGC 4 cut(s) 51, 898, 903, 1017
BbvI GCAGC 3 cut(s) 496, 797, 1003
BccI CCATC 7 cut(s) 57, 137, 180, 290, 355, 482, 741
BcgI CGANNNNNNTGC 4 cut(s) 549, 583, 590, 624
BcnI CCSGG 3 cut(s) 134, 293, 542
BcoDI GTCTC 1 cut(s) 356
BcuI ACTAGT 1 cut(s) 373
BfaI CTAG 3 cut(s) 374, 413, 462
BisI GCNGC 3 cut(s) 510, 811, 992
BlsI GCNGC 3 cut(s) 511, 812, 993
Bme1390I CCNGG 3 cut(s) 134, 293, 542
BmeT110I CYCGRG 1 cut(s) 599
BmgBI CACGTC 1 cut(s) 394
BmiI GGNNCC 4 cut(s) 153, 597, 818, 909
BmrFI CCNGG 3 cut(s) 134, 293, 542
BmsI GCATC 2 cut(s) 418, 737
BpmI CTGGAG 3 cut(s) 97, 727, 835
Bpu10I CCTNAGC 4 cut(s) 51, 898, 903, 1017
Bpu14I TTCGAA 1 cut(s) 559
BpuEI CTTGAG 1 cut(s) 670
BpuMI CCSGG 3 cut(s) 134, 293, 542
BsaAI YACGTR 1 cut(s) 882
BsaBI GATNNNNATC 1 cut(s) 408
BsaHI GRCGYC 1 cut(s) 308
BsaI GGTCTC 1 cut(s) 356
BsaJI CCNNGG 2 cut(s) 600, 648
BsaWI WCCGGW 1 cut(s) 910
BsaXI ACNNNNNCTCC 4 cut(s) 128, 158, 808, 838
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 292, 299, 446
Bse1I ACTGG 2 cut(s) 114, 304
Bse21I CCTNAGG 1 cut(s) 57
Bse8I GATNNNNATC 1 cut(s) 408
BseDI CCNNGG 2 cut(s) 600, 648
BseGI GGATG 5 cut(s) 68, 129, 282, 409, 493
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 4 cut(s) 100, 292, 299, 446
BseMII CTCAG 5 cut(s) 65, 71, 894, 912, 1008
BseNI ACTGG 2 cut(s) 114, 304
BseRI GAGGAG 1 cut(s) 196
BseSI GKGCMC 1 cut(s) 156
BseXI GCAGC 3 cut(s) 496, 797, 1003
Bsh1236I CGCG 1 cut(s) 999
BshFI GGCC 1 cut(s) 128
BshNI GGYRCC 2 cut(s) 151, 907
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 4 cut(s) 134, 293, 541, 911
BslFI GGGAC 2 cut(s) 80, 956
BslI CCNNNNNNNGG 4 cut(s) 100, 292, 299, 446
BsmAI GTCTC 1 cut(s) 356
BsmFI GGGAC 2 cut(s) 80, 956
BsmI GAATGC 1 cut(s) 570
BsnI GGCC 1 cut(s) 128
Bso31I GGTCTC 1 cut(s) 356
BsoBI CYCGRG 1 cut(s) 599
Bsp119I TTCGAA 1 cut(s) 559
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
BspANI GGCC 1 cut(s) 128
BspCNI CTCAG 5 cut(s) 64, 70, 895, 911, 1009
BspFNI CGCG 1 cut(s) 999
BspLI GGNNCC 4 cut(s) 153, 597, 818, 909
BspPI GGATC 5 cut(s) 96, 218, 590, 603, 661
BspT104I TTCGAA 1 cut(s) 559
BspT107I GGYRCC 2 cut(s) 151, 907
BspTNI GGTCTC 1 cut(s) 356
BsrI ACTGG 2 cut(s) 114, 304
BssECI CCNNGG 2 cut(s) 600, 648
BssMI GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
BssNI GRCGYC 1 cut(s) 308
Bst4CI ACNGT 2 cut(s) 220, 455
Bst6I CTCTTC 1 cut(s) 203
BstACI GRCGYC 1 cut(s) 308
BstBAI YACGTR 1 cut(s) 882
BstBI TTCGAA 1 cut(s) 559
BstC8I GCNNGC 1 cut(s) 670
BstDEI CTNAG 5 cut(s) 51, 57, 898, 903, 1017
BstDSI CCRYGG 1 cut(s) 648
BstF5I GGATG 5 cut(s) 68, 129, 282, 409, 493
BstFNI CGCG 1 cut(s) 999
BstKTI GATC 7 cut(s) 6, 91, 226, 467, 598, 656, 790
BstMAI GTCTC 1 cut(s) 356
BstMBI GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
BstMWI GCNNNNNNNGC 1 cut(s) 816
BstSCI CCNGG 3 cut(s) 132, 291, 540
BstSLI GKGCMC 1 cut(s) 156
BstUI CGCG 1 cut(s) 999
BstV1I GCAGC 3 cut(s) 496, 797, 1003
BstX2I RGATCY 2 cut(s) 595, 653
BstXI CCANNNNNNTGG 1 cut(s) 813
BstYI RGATCY 2 cut(s) 595, 653
Bsu36I CCTNAGG 1 cut(s) 57
BsuRI GGCC 1 cut(s) 128
BtgI CCRYGG 1 cut(s) 648
BtgZI GCGATG 1 cut(s) 30
BtrI CACGTC 1 cut(s) 394
BtsCI GGATG 5 cut(s) 68, 129, 282, 409, 493
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 1 cut(s) 670
Csp6I GTAC 2 cut(s) 117, 958
CspCI CAANNNNNGTGG 2 cut(s) 321, 356
CviAII CATG 3 cut(s) 446, 634, 807
CviQI GTAC 2 cut(s) 117, 958
DdeI CTNAG 5 cut(s) 51, 57, 898, 903, 1017
DpnI GATC 7 cut(s) 5, 90, 225, 466, 597, 655, 789
DpnII GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco31I GGTCTC 1 cut(s) 356
Eco81I CCTNAGG 1 cut(s) 57
Eco88I CYCGRG 1 cut(s) 599
EcoT22I ATGCAT 2 cut(s) 572, 613
FaeI CATG 3 cut(s) 449, 637, 810
FaqI GGGAC 2 cut(s) 80, 956
FatI CATG 3 cut(s) 445, 633, 806
FauNDI CATATG 2 cut(s) 232, 772
FblI GTMKAC 1 cut(s) 887
Fnu4HI GCNGC 3 cut(s) 510, 811, 992
FokI GGATG 5 cut(s) 75, 116, 269, 416, 500
Fsp4HI GCNGC 3 cut(s) 510, 811, 992
FspBI CTAG 3 cut(s) 374, 413, 462
GluI GCNGC 3 cut(s) 510, 811, 992
GsuI CTGGAG 3 cut(s) 97, 727, 835
HaeIII GGCC 1 cut(s) 128
HapII CCGG 4 cut(s) 134, 293, 541, 911
Hin1I GRCGYC 1 cut(s) 308
Hin1II CATG 3 cut(s) 449, 637, 810
HindIII AAGCTT 1 cut(s) 78
HinfI GANTC 8 cut(s) 35, 104, 161, 167, 173, 326, 740, 863
HpaII CCGG 4 cut(s) 134, 293, 541, 911
HphI GGTGA 3 cut(s) 83, 429, 885
Hpy166II GTNNAC 2 cut(s) 17, 888
Hpy188I TCNGA 8 cut(s) 34, 166, 172, 178, 469, 862, 868, 1008
Hpy188III TCNNGA 5 cut(s) 599, 687, 695, 709, 744
Hpy8I GTNNAC 2 cut(s) 17, 888
Hpy99I CGWCG 1 cut(s) 313
HpyAV CCTTC 4 cut(s) 39, 585, 750, 927
HpyCH4III ACNGT 2 cut(s) 220, 455
HpyCH4IV ACGT 4 cut(s) 308, 393, 823, 881
HpyCH4V TGCA 9 cut(s) 215, 230, 409, 534, 570, 611, 728, 832, 839
HpyF10VI GCNNNNNNNGC 1 cut(s) 816
HpyF3I CTNAG 5 cut(s) 51, 57, 898, 903, 1017
HpySE526I ACGT 4 cut(s) 308, 393, 823, 881
Hsp92I GRCGYC 1 cut(s) 308
Hsp92II CATG 3 cut(s) 449, 637, 810
Kzo9I GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
LmnI GCTCC 3 cut(s) 808, 816, 988
Lsp1109I GCAGC 3 cut(s) 496, 797, 1003
LweI GCATC 2 cut(s) 418, 737
MaeI CTAG 3 cut(s) 374, 413, 462
MaeII ACGT 4 cut(s) 308, 393, 823, 881
MaeIII GTNAC 3 cut(s) 287, 366, 449
MalI GATC 7 cut(s) 5, 90, 225, 466, 597, 655, 789
MboI GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
MboII GAAGA 3 cut(s) 33, 190, 440
MflI RGATCY 2 cut(s) 595, 653
MhlI GDGCHC 1 cut(s) 156
MluCI AATT 6 cut(s) 398, 516, 618, 702, 714, 853
MluI ACGCGT 1 cut(s) 997
MlyI GAGTC 2 cut(s) 320, 734
MmeI TCCRAC 2 cut(s) 66, 465
Mph1103I ATGCAT 2 cut(s) 572, 613
MroXI GAANNNNTTC 1 cut(s) 978
MspA1I CMGCKG 1 cut(s) 902
MspI CCGG 4 cut(s) 134, 293, 541, 911
MspR9I CCNGG 3 cut(s) 134, 293, 542
Mva1269I GAATGC 1 cut(s) 570
MvnI CGCG 1 cut(s) 999
MwoI GCNNNNNNNGC 1 cut(s) 816
NciI CCSGG 3 cut(s) 134, 293, 542
NdeI CATATG 2 cut(s) 232, 772
NdeII GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
NlaIII CATG 3 cut(s) 449, 637, 810
NlaIV GGNNCC 4 cut(s) 153, 597, 818, 909
NmuCI GTSAC 1 cut(s) 366
NsiI ATGCAT 2 cut(s) 572, 613
NspV TTCGAA 1 cut(s) 559
PctI GAATGC 1 cut(s) 570
PdmI GAANNNNTTC 1 cut(s) 978
PfeI GAWTC 6 cut(s) 35, 104, 161, 167, 173, 863
PfoI TCCNGGA 1 cut(s) 132
PkrI GCNGC 3 cut(s) 511, 812, 993
PleI GAGTC 2 cut(s) 320, 734
PpsI GAGTC 2 cut(s) 320, 734
Ppu21I YACGTR 1 cut(s) 882
PspN4I GGNNCC 4 cut(s) 153, 597, 818, 909
PsuI RGATCY 2 cut(s) 595, 653
PvuII CAGCTG 1 cut(s) 902
RsaI GTAC 2 cut(s) 118, 959
RsaNI GTAC 2 cut(s) 117, 958
SatI GCNGC 3 cut(s) 510, 811, 992
Sau3AI GATC 7 cut(s) 3, 88, 223, 464, 595, 653, 787
SchI GAGTC 2 cut(s) 320, 734
ScrFI CCNGG 3 cut(s) 134, 293, 542
SduI GDGCHC 1 cut(s) 156
SfaNI GCATC 2 cut(s) 418, 737
SfuI TTCGAA 1 cut(s) 559
SmlI CTYRAG 1 cut(s) 685
SmoI CTYRAG 1 cut(s) 685
SpeI ACTAGT 1 cut(s) 373
Sse9I AATT 6 cut(s) 398, 516, 618, 702, 714, 853
SspMI CTAG 3 cut(s) 374, 413, 462
StyD4I CCNGG 3 cut(s) 132, 291, 540
TaaI ACNGT 2 cut(s) 220, 455
TaiI ACGT 4 cut(s) 311, 396, 826, 884
TaqI TCGA 2 cut(s) 237, 559
TasI AATT 6 cut(s) 398, 516, 618, 702, 714, 853
TatI WGTACW 1 cut(s) 116
TfiI GAWTC 6 cut(s) 35, 104, 161, 167, 173, 863
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 1 cut(s) 366
TseI GCWGC 3 cut(s) 509, 810, 991
Tsp45I GTSAC 1 cut(s) 366
TspDTI ATGAA 6 cut(s) 33, 270, 542, 622, 714, 789
TspGWI ACGGA 1 cut(s) 275
TspRI CASTG 1 cut(s) 256
XmiI GTMKAC 1 cut(s) 887
XmnI GAANNNNTTC 1 cut(s) 978
XspI CTAG 3 cut(s) 374, 413, 462
ZraI GACGTC 1 cut(s) 309
Zsp2I ATGCAT 2 cut(s) 572, 613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.