Rh1CG313100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
58714950 .. 58717373
2424 bp
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UTR
Exon/CDS
Intron
Rh1CG313100.1

Sequence Viewer

Length: 201 bp
ATGATTCTGAAATCAAAGAAGCTCCAACTGTTTTCGCGATCCAAAAGAAAGAAAGAAAATCCAATTCCAAACAACTCCGATCGTCTTCTTCAGCTTAAAGGTGGTGTTGGAGGTTTTGTTGGTGTGATAGAAAGGGGAAGAAGAGGGATTGAAGTCGGGAGTGTTGGAAAGTTTGAAGCTTTGATCGGGTATCAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.31

Weight (kDa)

10.49

Isoelectric Point (pI)

47.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 37
AclWI GGATC 1 cut(s) 33
AcuI CTGAAG 1 cut(s) 74
AgsI TTSAA 2 cut(s) 152, 176
AluBI AGCT 3 cut(s) 22, 94, 179
AluI AGCT 3 cut(s) 22, 94, 179
AlwI GGATC 1 cut(s) 33
BbsI GAAGAC 1 cut(s) 77
BpiI GAAGAC 1 cut(s) 77
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsh1236I CGCG 1 cut(s) 37
Bsh1285I CGRYCG 1 cut(s) 82
BsiEI CGRYCG 1 cut(s) 82
Bsp143I GATC 3 cut(s) 38, 79, 183
Bsp68I TCGCGA 1 cut(s) 37
BspFNI CGCG 1 cut(s) 37
BspPI GGATC 1 cut(s) 33
BssMI GATC 3 cut(s) 38, 79, 183
Bst4CI ACNGT 1 cut(s) 30
Bst6I CTCTTC 1 cut(s) 136
BstFNI CGCG 1 cut(s) 37
BstKTI GATC 3 cut(s) 41, 82, 186
BstMBI GATC 3 cut(s) 38, 79, 183
BstMCI CGRYCG 1 cut(s) 82
BstUI CGCG 1 cut(s) 37
BstV2I GAAGAC 1 cut(s) 77
BtuMI TCGCGA 1 cut(s) 37
CviJI RGCY 3 cut(s) 22, 94, 179
CviKI_1 RGCY 3 cut(s) 22, 94, 179
DpnI GATC 3 cut(s) 40, 81, 185
DpnII GATC 3 cut(s) 38, 79, 183
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 74
HindIII AAGCTT 1 cut(s) 177
HinfI GANTC 1 cut(s) 4
Hpy188I TCNGA 2 cut(s) 9, 79
Hpy188III TCNNGA 3 cut(s) 36, 157, 194
HpyCH4III ACNGT 1 cut(s) 30
Kzo9I GATC 3 cut(s) 38, 79, 183
LmnI GCTCC 1 cut(s) 27
MalI GATC 3 cut(s) 40, 81, 185
MboI GATC 3 cut(s) 38, 79, 183
MboII GAAGA 4 cut(s) 77, 80, 150, 153
MluCI AATT 1 cut(s) 63
MmeI TCCRAC 3 cut(s) 49, 88, 145
MnlI CCTC 2 cut(s) 104, 137
MseI TTAA 1 cut(s) 96
MvnI CGCG 1 cut(s) 37
NdeII GATC 3 cut(s) 38, 79, 183
NruI TCGCGA 1 cut(s) 37
PfeI GAWTC 1 cut(s) 4
Ple19I CGATCG 1 cut(s) 82
PvuI CGATCG 1 cut(s) 82
RruI TCGCGA 1 cut(s) 37
SaqAI TTAA 1 cut(s) 96
Sau3AI GATC 3 cut(s) 38, 79, 183
SetI ASST 5 cut(s) 24, 96, 103, 115, 181
SgeI CNNG 2 cut(s) 48, 169
Sse9I AATT 1 cut(s) 63
TaaI ACNGT 1 cut(s) 30
TasI AATT 1 cut(s) 63
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.