No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000009658 RLG00000012960 |
| rosa_multiflora | Rmu_sc0000613.1_g000035 |
| rosa_roxburghii | Rroxscaffold_3G00251250 |
| rosa_rugosa | Rorug02G0653900 |
| rosa_samantha | Rh1BG296900 Rh1CG313100 Rh2AG328500 Rh2AG504700 Rh3BG308200 Rh4BG209000 Rh4BG262000 Rh4DG045400 Rh4DG124300 Rh5CG367300 Rh5DG414400 Rh6CG017900 Rh6CG023700 Rh6DG018900 Rh7DG292100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 6 |
| AcsI | RAATTY | 1 cut(s) | 46 |
| AcuI | CTGAAG | 1 cut(s) | 89 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 23, 55 |
| AluBI | AGCT | 3 cut(s) | 109, 137, 148 |
| AluI | AGCT | 3 cut(s) | 109, 137, 148 |
| Alw26I | GTCTC | 1 cut(s) | 111 |
| AoxI | GGCC | 1 cut(s) | 6 |
| ApoI | RAATTY | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 1 cut(s) | 167 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 126, 158 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| BccI | CCATC | 1 cut(s) | 152 |
| BcoDI | GTCTC | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BpmI | CTGGAG | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 1 cut(s) | 177 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse3DI | GCAATG | 1 cut(s) | 210 |
| BseDI | CCNNGG | 1 cut(s) | 177 |
| BseMI | GCAATG | 1 cut(s) | 210 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BsmAI | GTCTC | 1 cut(s) | 111 |
| BsnI | GGCC | 1 cut(s) | 8 |
| Bsp143I | GATC | 1 cut(s) | 94 |
| BspANI | GGCC | 1 cut(s) | 8 |
| BsrDI | GCAATG | 1 cut(s) | 210 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssECI | CCNNGG | 1 cut(s) | 177 |
| BssMI | GATC | 1 cut(s) | 94 |
| BssT1I | CCWWGG | 1 cut(s) | 177 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstKTI | GATC | 1 cut(s) | 97 |
| BstMAI | GTCTC | 1 cut(s) | 111 |
| BstMBI | GATC | 1 cut(s) | 94 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviJI | RGCY | 4 cut(s) | 8, 109, 137, 148 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 109, 137, 148 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 96 |
| DpnII | GATC | 1 cut(s) | 94 |
| EaeI | YGGCCR | 1 cut(s) | 6 |
| Eco130I | CCWWGG | 1 cut(s) | 177 |
| Eco57I | CTGAAG | 1 cut(s) | 89 |
| EcoT14I | CCWWGG | 1 cut(s) | 177 |
| ErhI | CCWWGG | 1 cut(s) | 177 |
| GsuI | CTGGAG | 1 cut(s) | 159 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| HphI | GGTGA | 1 cut(s) | 167 |
| HpyAV | CCTTC | 2 cut(s) | 160, 194 |
| Kzo9I | GATC | 1 cut(s) | 94 |
| LpnPI | CCDG | 3 cut(s) | 38, 123, 172 |
| MalI | GATC | 1 cut(s) | 96 |
| MboI | GATC | 1 cut(s) | 94 |
| MboII | GAAGA | 3 cut(s) | 76, 92, 95 |
| MluCI | AATT | 2 cut(s) | 46, 78 |
| MmeI | TCCRAC | 1 cut(s) | 54 |
| MspA1I | CMGCKG | 1 cut(s) | 148 |
| NdeII | GATC | 1 cut(s) | 94 |
| PvuII | CAGCTG | 1 cut(s) | 148 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| Sau3AI | GATC | 1 cut(s) | 94 |
| SetI | ASST | 4 cut(s) | 111, 139, 150, 183 |
| SgeI | CNNG | 6 cut(s) | 17, 37, 126, 150, 190, 199 |
| Sse9I | AATT | 2 cut(s) | 46, 78 |
| StyI | CCWWGG | 1 cut(s) | 177 |
| TaqII | GACCGA | 1 cut(s) | 146 |
| TasI | AATT | 2 cut(s) | 46, 78 |
| TatI | WGTACW | 1 cut(s) | 142 |
| TspDTI | ATGAA | 1 cut(s) | 199 |
| XapI | RAATTY | 1 cut(s) | 46 |