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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000009658 RLG00000012960 |
| rosa_multiflora | Rmu_sc0000613.1_g000035 |
| rosa_roxburghii | Rroxscaffold_3G00251250 |
| rosa_rugosa | Rorug02G0653900 |
| rosa_samantha | Rh1BG296900 Rh1CG313100 Rh2AG328500 Rh2AG504700 Rh3BG308200 Rh4BG209000 Rh4BG262000 Rh4DG045400 Rh4DG124300 Rh5CG367300 Rh5DG414400 Rh6CG017900 Rh6CG023700 Rh6DG018900 Rh7DG292100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 188 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcsI | RAATTY | 1 cut(s) | 147 |
| AcuI | CTGAAG | 1 cut(s) | 184 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 348 |
| AgsI | TTSAA | 3 cut(s) | 263, 287, 321 |
| AluBI | AGCT | 3 cut(s) | 171, 204, 290 |
| AluI | AGCT | 3 cut(s) | 171, 204, 290 |
| Alw26I | GTCTC | 2 cut(s) | 129, 181 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AoxI | GGCC | 1 cut(s) | 104 |
| ApeKI | GCWGC | 1 cut(s) | 300 |
| ApoI | RAATTY | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 2 cut(s) | 101, 121 |
| BbsI | GAAGAC | 1 cut(s) | 187 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BceAI | ACGGC | 1 cut(s) | 78 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BcoDI | GTCTC | 2 cut(s) | 129, 181 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BisI | GCNGC | 1 cut(s) | 301 |
| BlsI | GCNGC | 1 cut(s) | 302 |
| BmsI | GCATC | 2 cut(s) | 166, 312 |
| BpiI | GAAGAC | 1 cut(s) | 187 |
| BsaBI | GATNNNNATC | 1 cut(s) | 263 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 348 |
| Bse8I | GATNNNNATC | 1 cut(s) | 263 |
| BseGI | GGATG | 1 cut(s) | 303 |
| BseJI | GATNNNNATC | 1 cut(s) | 263 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BseMII | CTCAG | 1 cut(s) | 49 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| Bsh1236I | CGCG | 1 cut(s) | 188 |
| Bsh1285I | CGRYCG | 1 cut(s) | 192 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BsiEI | CGRYCG | 1 cut(s) | 192 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 348 |
| BsmAI | GTCTC | 2 cut(s) | 129, 181 |
| BsnI | GGCC | 1 cut(s) | 106 |
| Bsp143I | GATC | 4 cut(s) | 3, 63, 189, 294 |
| Bsp68I | TCGCGA | 1 cut(s) | 188 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 1 cut(s) | 48 |
| BspFNI | CGCG | 1 cut(s) | 188 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BssMI | GATC | 4 cut(s) | 3, 63, 189, 294 |
| Bst6I | CTCTTC | 2 cut(s) | 214, 247 |
| BstDEI | CTNAG | 1 cut(s) | 35 |
| BstF5I | GGATG | 1 cut(s) | 303 |
| BstFNI | CGCG | 1 cut(s) | 188 |
| BstKTI | GATC | 4 cut(s) | 6, 66, 192, 297 |
| BstMAI | GTCTC | 2 cut(s) | 129, 181 |
| BstMBI | GATC | 4 cut(s) | 3, 63, 189, 294 |
| BstMCI | CGRYCG | 1 cut(s) | 192 |
| BstUI | CGCG | 1 cut(s) | 188 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BstV2I | GAAGAC | 1 cut(s) | 187 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 303 |
| BtsI | GCAGTG | 1 cut(s) | 277 |
| BtsIMutI | CAGTG | 1 cut(s) | 277 |
| BtuMI | TCGCGA | 1 cut(s) | 188 |
| CviAII | CATG | 3 cut(s) | 50, 76, 329 |
| CviJI | RGCY | 6 cut(s) | 106, 171, 204, 290, 300, 326 |
| CviKI_1 | RGCY | 6 cut(s) | 106, 171, 204, 290, 300, 326 |
| DdeI | CTNAG | 1 cut(s) | 35 |
| DpnI | GATC | 4 cut(s) | 5, 65, 191, 296 |
| DpnII | GATC | 4 cut(s) | 3, 63, 189, 294 |
| Eam1104I | CTCTTC | 2 cut(s) | 214, 247 |
| EarI | CTCTTC | 2 cut(s) | 214, 247 |
| Eco57I | CTGAAG | 1 cut(s) | 184 |
| EcoT22I | ATGCAT | 1 cut(s) | 81 |
| FaeI | CATG | 3 cut(s) | 53, 79, 332 |
| FaiI | YATR | 8 cut(s) | 32, 51, 58, 60, 77, 81, 86, 330 |
| FatI | CATG | 3 cut(s) | 49, 75, 328 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 1 cut(s) | 301 |
| FokI | GGATG | 1 cut(s) | 290 |
| Fsp4HI | GCNGC | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 1 cut(s) | 301 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| Hin1II | CATG | 3 cut(s) | 53, 79, 332 |
| HindIII | AAGCTT | 1 cut(s) | 288 |
| HphI | GGTGA | 2 cut(s) | 101, 121 |
| Hpy188I | TCNGA | 3 cut(s) | 38, 153, 162 |
| Hpy188III | TCNNGA | 1 cut(s) | 187 |
| HpyAV | CCTTC | 2 cut(s) | 142, 236 |
| HpyCH4IV | ACGT | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 2 cut(s) | 79, 303 |
| HpyF3I | CTNAG | 1 cut(s) | 35 |
| HpySE526I | ACGT | 1 cut(s) | 88 |
| Hsp92II | CATG | 3 cut(s) | 53, 79, 332 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 4 cut(s) | 3, 63, 189, 294 |
| LpnPI | CCDG | 2 cut(s) | 84, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| LweI | GCATC | 2 cut(s) | 166, 312 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeII | ACGT | 1 cut(s) | 88 |
| MalI | GATC | 4 cut(s) | 5, 65, 191, 296 |
| MboI | GATC | 4 cut(s) | 3, 63, 189, 294 |
| MboII | GAAGA | 5 cut(s) | 187, 190, 231, 261, 264 |
| MluCI | AATT | 2 cut(s) | 39, 147 |
| MmeI | TCCRAC | 1 cut(s) | 256 |
| MnlI | CCTC | 6 cut(s) | 117, 146, 215, 248, 318, 342 |
| Mph1103I | ATGCAT | 1 cut(s) | 81 |
| MvnI | CGCG | 1 cut(s) | 188 |
| NdeII | GATC | 4 cut(s) | 3, 63, 189, 294 |
| NlaIII | CATG | 3 cut(s) | 53, 79, 332 |
| NruI | TCGCGA | 1 cut(s) | 188 |
| NsiI | ATGCAT | 1 cut(s) | 81 |
| PkrI | GCNGC | 1 cut(s) | 302 |
| Ple19I | CGATCG | 1 cut(s) | 192 |
| PvuI | CGATCG | 1 cut(s) | 192 |
| RruI | TCGCGA | 1 cut(s) | 188 |
| SatI | GCNGC | 1 cut(s) | 301 |
| Sau3AI | GATC | 4 cut(s) | 3, 63, 189, 294 |
| SetI | ASST | 9 cut(s) | 91, 114, 134, 173, 206, 214, 226, 292, 353 |
| SfaNI | GCATC | 2 cut(s) | 166, 312 |
| SgeI | CNNG | 8 cut(s) | 39, 62, 83, 88, 199, 221, 243, 341 |
| Sse9I | AATT | 2 cut(s) | 39, 147 |
| SspMI | CTAG | 1 cut(s) | 27 |
| TaiI | ACGT | 1 cut(s) | 91 |
| TaqI | TCGA | 2 cut(s) | 314, 347 |
| TasI | AATT | 2 cut(s) | 39, 147 |
| TscAI | CASTG | 1 cut(s) | 277 |
| TseI | GCWGC | 1 cut(s) | 300 |
| TspDTI | ATGAA | 1 cut(s) | 38 |
| TspRI | CASTG | 1 cut(s) | 277 |
| XapI | RAATTY | 1 cut(s) | 147 |
| XspI | CTAG | 1 cut(s) | 27 |
| Zsp2I | ATGCAT | 1 cut(s) | 81 |