Rh1CG395700

Lipase 3 N-terminal region

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
66312827 .. 66318567
5741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG395700.1

Sequence Viewer

Length: 1497 bp
ATGTCGATCCTATGCGGCTGCCCTCTCCTTGAGTGTGTTTACTGTCTGGCATGTACTCGTTGGGCTTATAAGCGATGCCTCCACACGGCAGGCCATGACAGTGAGACATGGGGCCTTTCCAGTGCCGAAGAATTTGAGCCTGTTCCTCGCATCTGCCGGTACATTCTAGCTGTTTATGAAGATGATCTTAGGCACCCACTTTGGGAACCTCCTGGTGGGTATGGAATAAACCCAGATTGGTTAATTTCGAAACGAACATATGTAGATACCCAAGGGCAAGCTCCACCTTATATGTTGTATCTTGATCATAATCATGCCGATATAGTTCTTGCCTTTAGAGGCCTTAATTTGGCAAGAGAGAGTGACTATGCAGTTTTATTGGACAATAAGCTGGGGAAGAGGAAATTTGATGGTGGATACGTTCACAACGGGCTATTGAATGCAGCTGGATGGGTTCTTGATGCAGAATGTGAAACTCTGAAAGATTTGGTGGGGAAATATCCAAAATATACTTTGACATTCGCAGGACACTCCCTAGGTTCAGGTGTAGCAGCATTGTTAACAATGCTGGTGGTGCAGAATAGGGATAGATTGGGAGACATTGAGCGAAAGAGGGTTAGGGGATATGCGATTGCACCAGCGAGGTGTATGTCATTGAACTTAGCTGTCAGATATGCAGACGTTATCAATTCTGTTGTGCTTCAGGATGACTTCTTACCACGGACAGCCACACCCTTGGAAGACATTTTCAAGTCACTTTTCTGTTTGCCGTGCCTACTATGCCTACGATGTATGGGGGACACATGTATACCTGAGGAGAAGATGCTCAAAGATCCAAGGAGGCTGTATGCACCTGGCCGCCTCTATCATATTGTTGAGAGAAAACCTTGCAGGTTAGGAAGGTTTCCCCCTGTTGTCAAGACAGCAGTGCCCGTAGATGGGAGGTTTGAGCACATAGTTCTCTCTTGTAATGCCACTTCAGATCATGCCATCATTTGGATAGAGAGAGAAGCTCAAAGGGCACTAGATTTAATGTTGGAGAAAGCTCAAAGTATGGAGATTCCACCAAAGCAAAGAATGGAGCGTCAGGAGACAGTAGCGAAAGAACACACCGAGGAGTATAAGGCTGCATTACAGAGGGCTGTCACATTGGCTGTGCCTCACGCGTACTCACCATCACCATACGGAACTTTTGATGAGCGGGAAGAGGAGGAGCACTCAAGCGGGGAATCTAGCAGGAAGGAGTTAAGGAGTAGGGAATTCAACCAGGAAGCATTGATACAGTTGGGTCACTCGGTTGATTACAACAGAATTGACCCGTCAAGGGTTGTTCAACTTTCTTGGCGACCAAGGTCAGGGTGTTTCTGTACAAAGGATTCCTATCTGATGAGGAGTGTGACCACCTTATTTCTTTGGCAAATGGTGGAGAAGAGAAGTCTTCAACAGAATATGATGAAGCTGGAAACAGCAATACAAATAGGATGCTTAAAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

56.75

Weight (kDa)

7.17

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase3_N PF03893 9 - 75 4.4e-23 Lipase 3 N-terminal region
Lipase_3 PF01764 109 - 244 9.9e-26 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 69
Acc36I ACCTGC 1 cut(s) 882
AccB1I GGYRCC 1 cut(s) 192
AccB7I CCANNNNNTGG 1 cut(s) 996
AccBSI CCGCTC 1 cut(s) 1201
AccI GTMKAC 1 cut(s) 808
AccII CGCG 1 cut(s) 1166
AciI CCGC 4 cut(s) 15, 859, 1201, 1224
AclWI GGATC 1 cut(s) 827
AcoI YGGCCR 1 cut(s) 856
AcsI RAATTY 3 cut(s) 131, 404, 1259
AcuI CTGAAG 2 cut(s) 686, 963
AfaI GTAC 4 cut(s) 55, 161, 1169, 1369
AfiI CCNNNNNNNGG 9 cut(s) 85, 202, 215, 349, 938, 939, 996, 1324, 1355
AflIII ACRYGT 2 cut(s) 803, 1164
AgsI TTSAA 6 cut(s) 439, 658, 751, 1264, 1334, 1442
AjnI CCWGG 3 cut(s) 211, 853, 1266
AluBI AGCT 8 cut(s) 170, 281, 391, 446, 665, 1013, 1046, 1459
AluI AGCT 8 cut(s) 170, 281, 391, 446, 665, 1013, 1046, 1459
Alw21I GWGCWC 2 cut(s) 954, 1218
Alw26I GTCTC 3 cut(s) 98, 591, 1085
AlwI GGATC 1 cut(s) 827
AoxI GGCC 4 cut(s) 91, 112, 340, 856
ApeKI GCWGC 4 cut(s) 18, 443, 551, 1127
ApoI RAATTY 3 cut(s) 131, 404, 1259
AspA2I CCTAGG 1 cut(s) 535
AspS9I GGNCC 1 cut(s) 112
AsuHPI GGTGA 2 cut(s) 1164, 1170
AsuII TTCGAA 1 cut(s) 248
AvrII CCTAGG 1 cut(s) 535
AxyI CCTNAGG 1 cut(s) 813
BaeGI GKGCMC 2 cut(s) 933, 1024
BanI GGYRCC 1 cut(s) 192
BarI GAAGNNNNNNTAC 4 cut(s) 961, 993, 1263, 1295
BbsI GAAGAC 2 cut(s) 747, 1430
Bbv12I GWGCWC 2 cut(s) 954, 1218
BbvI GCAGC 4 cut(s) 5, 455, 563, 1114
BccI CCATC 5 cut(s) 404, 444, 932, 998, 1183
BceAI ACGGC 2 cut(s) 102, 754
BciT130I CCWGG 3 cut(s) 213, 855, 1268
BciVI GTATCC 1 cut(s) 410
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 3 cut(s) 98, 591, 1085
BfaI CTAG 4 cut(s) 167, 536, 1025, 1233
BfuAI ACCTGC 1 cut(s) 882
BfuI GTATCC 1 cut(s) 410
BisI GCNGC 6 cut(s) 16, 19, 444, 552, 859, 1128
BlnI CCTAGG 1 cut(s) 535
BlsI GCNGC 6 cut(s) 17, 20, 445, 553, 860, 1129
Bme1390I CCNGG 3 cut(s) 213, 855, 1268
BmgT120I GGNCC 1 cut(s) 112
BmiI GGNNCC 3 cut(s) 113, 194, 207
BmrFI CCNGG 3 cut(s) 213, 855, 1268
BmsI GCATC 5 cut(s) 65, 159, 451, 813, 1472
BoxI GACNNNNGTC 1 cut(s) 1351
BpiI GAAGAC 2 cut(s) 747, 1430
BplI GAGNNNNNCTC 4 cut(s) 997, 1029, 1202, 1234
Bpu14I TTCGAA 1 cut(s) 248
BpuEI CTTGAG 2 cut(s) 50, 1204
BsaBI GATNNNNATC 2 cut(s) 309, 1380
BsaJI CCNNGG 7 cut(s) 271, 535, 719, 735, 836, 1113, 1349
Bsc4I CCNNNNNNNGG 9 cut(s) 85, 202, 215, 349, 938, 939, 996, 1324, 1355
Bse118I RCCGGY 1 cut(s) 156
Bse1I ACTGG 1 cut(s) 120
Bse21I CCTNAGG 1 cut(s) 813
Bse8I GATNNNNATC 2 cut(s) 309, 1380
BseBI CCWGG 3 cut(s) 213, 855, 1268
BseDI CCNNGG 7 cut(s) 271, 535, 719, 735, 836, 1113, 1349
BseGI GGATG 3 cut(s) 455, 712, 1487
BseJI GATNNNNATC 2 cut(s) 309, 1380
BseLI CCNNNNNNNGG 9 cut(s) 85, 202, 215, 349, 938, 939, 996, 1324, 1355
BseMII CTCAG 1 cut(s) 804
BseNI ACTGG 1 cut(s) 120
BseRI GAGGAG 5 cut(s) 830, 1130, 1223, 1226, 1405
BseSI GKGCMC 2 cut(s) 933, 1024
BseXI GCAGC 4 cut(s) 5, 455, 563, 1114
BseYI CCCAGC 1 cut(s) 391
BsgI GTGCAG 1 cut(s) 596
Bsh1236I CGCG 1 cut(s) 1166
BshFI GGCC 4 cut(s) 93, 114, 342, 858
BshNI GGYRCC 1 cut(s) 192
BsiHKAI GWGCWC 2 cut(s) 954, 1218
BsiSI CCGG 1 cut(s) 157
BslFI GGGAC 1 cut(s) 812
BslI CCNNNNNNNGG 9 cut(s) 85, 202, 215, 349, 938, 939, 996, 1324, 1355
BsmAI GTCTC 3 cut(s) 98, 591, 1085
BsmFI GGGAC 1 cut(s) 812
BsmI GAATGC 1 cut(s) 445
BsnI GGCC 4 cut(s) 93, 114, 342, 858
Bsp119I TTCGAA 1 cut(s) 248
Bsp1286I GDGCHC 4 cut(s) 933, 954, 1024, 1218
Bsp1407I TGTACA 1 cut(s) 1367
Bsp143I GATC 5 cut(s) 6, 184, 304, 832, 982
BspACI CCGC 4 cut(s) 15, 859, 1201, 1224
BspANI GGCC 4 cut(s) 93, 114, 342, 858
BspCNI CTCAG 1 cut(s) 805
BspFNI CGCG 1 cut(s) 1166
BspLI GGNNCC 3 cut(s) 113, 194, 207
BspMI ACCTGC 1 cut(s) 882
BspPI GGATC 1 cut(s) 827
BspT104I TTCGAA 1 cut(s) 248
BspT107I GGYRCC 1 cut(s) 192
BsrBI CCGCTC 1 cut(s) 1201
BsrFI RCCGGY 1 cut(s) 156
BsrGI TGTACA 1 cut(s) 1367
BsrI ACTGG 1 cut(s) 120
BssAI RCCGGY 1 cut(s) 156
BssECI CCNNGG 7 cut(s) 271, 535, 719, 735, 836, 1113, 1349
BssMI GATC 5 cut(s) 6, 184, 304, 832, 982
BssNAI GTATAC 1 cut(s) 809
BssT1I CCWWGG 5 cut(s) 271, 535, 735, 836, 1349
Bst1107I GTATAC 1 cut(s) 809
Bst2UI CCWGG 3 cut(s) 213, 855, 1268
Bst4CI ACNGT 4 cut(s) 44, 101, 1096, 1284
Bst6I CTCTTC 3 cut(s) 392, 1200, 1424
BstAUI TGTACA 1 cut(s) 1367
BstBI TTCGAA 1 cut(s) 248
BstC8I GCNNGC 2 cut(s) 91, 279
BstDEI CTNAG 3 cut(s) 188, 661, 813
BstDSI CCRYGG 1 cut(s) 719
BstF5I GGATG 3 cut(s) 455, 712, 1487
BstFNI CGCG 1 cut(s) 1166
BstKTI GATC 5 cut(s) 9, 187, 307, 835, 985
BstMAI GTCTC 3 cut(s) 98, 591, 1085
BstMBI GATC 5 cut(s) 6, 184, 304, 832, 982
BstMWI GCNNNNNNNGC 3 cut(s) 574, 780, 1019
BstNI CCWGG 3 cut(s) 213, 855, 1268
BstNSI RCATGY 2 cut(s) 54, 807
BstPAI GACNNNNGTC 1 cut(s) 1351
BstSCI CCNGG 3 cut(s) 211, 853, 1266
BstSLI GKGCMC 2 cut(s) 933, 1024
BstUI CGCG 1 cut(s) 1166
BstV1I GCAGC 4 cut(s) 5, 455, 563, 1114
BstV2I GAAGAC 2 cut(s) 747, 1430
BstX2I RGATCY 1 cut(s) 832
BstXI CCANNNNNNTGG 1 cut(s) 736
BstYI RGATCY 1 cut(s) 832
BstZ17I GTATAC 1 cut(s) 809
Bsu36I CCTNAGG 1 cut(s) 813
BsuI GTATCC 1 cut(s) 410
BsuRI GGCC 4 cut(s) 93, 114, 342, 858
BtgI CCRYGG 1 cut(s) 719
BtgZI GCGATG 1 cut(s) 88
BtsCI GGATG 3 cut(s) 455, 712, 1487
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 3 cut(s) 106, 127, 933
BveI ACCTGC 1 cut(s) 882
Cac8I GCNNGC 2 cut(s) 91, 279
Cfr10I RCCGGY 1 cut(s) 156
Cfr13I GGNCC 1 cut(s) 112
CseI GACGC 1 cut(s) 1073
Csp6I GTAC 4 cut(s) 54, 160, 1168, 1368
CspCI CAANNNNNGTGG 2 cut(s) 552, 587
CviAII CATG 6 cut(s) 51, 95, 108, 314, 804, 986
CviQI GTAC 4 cut(s) 54, 160, 1168, 1368
DdeI CTNAG 3 cut(s) 188, 661, 813
DpnI GATC 5 cut(s) 8, 186, 306, 834, 984
DpnII GATC 5 cut(s) 6, 184, 304, 832, 982
EaeI YGGCCR 1 cut(s) 856
Eam1104I CTCTTC 3 cut(s) 392, 1200, 1424
EarI CTCTTC 3 cut(s) 392, 1200, 1424
Eco130I CCWWGG 5 cut(s) 271, 535, 735, 836, 1349
Eco147I AGGCCT 1 cut(s) 342
Eco57I CTGAAG 2 cut(s) 686, 963
Eco81I CCTNAGG 1 cut(s) 813
EcoO109I RGGNCCY 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 1259
EcoRII CCWGG 3 cut(s) 211, 853, 1266
EcoT14I CCWWGG 5 cut(s) 271, 535, 735, 836, 1349
ErhI CCWWGG 5 cut(s) 271, 535, 735, 836, 1349
FaeI CATG 6 cut(s) 54, 98, 111, 317, 807, 989
FalI AAGNNNNNCTT 2 cut(s) 171, 203
FaqI GGGAC 1 cut(s) 812
FatI CATG 6 cut(s) 50, 94, 107, 313, 803, 985
FauI CCCGC 2 cut(s) 1194, 1217
FauNDI CATATG 1 cut(s) 259
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 808
Fnu4HI GCNGC 6 cut(s) 16, 19, 444, 552, 859, 1128
FokI GGATG 2 cut(s) 462, 719
Fsp4HI GCNGC 6 cut(s) 16, 19, 444, 552, 859, 1128
FspBI CTAG 4 cut(s) 167, 536, 1025, 1233
GluI GCNGC 6 cut(s) 16, 19, 444, 552, 859, 1128
GsaI CCCAGC 1 cut(s) 395
HaeIII GGCC 4 cut(s) 93, 114, 342, 858
HapII CCGG 1 cut(s) 157
HgaI GACGC 1 cut(s) 1073
Hin1II CATG 6 cut(s) 54, 98, 111, 317, 807, 989
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HinfI GANTC 3 cut(s) 1060, 1229, 1376
HpaI GTTAAC 1 cut(s) 561
HpaII CCGG 1 cut(s) 157
HphI GGTGA 2 cut(s) 1164, 1170
Hpy166II GTNNAC 4 cut(s) 40, 424, 561, 809
Hpy188I TCNGA 4 cut(s) 480, 671, 982, 1386
Hpy188III TCNNGA 5 cut(s) 302, 458, 704, 919, 1088
Hpy8I GTNNAC 4 cut(s) 40, 424, 561, 809
HpyAV CCTTC 2 cut(s) 894, 1234
HpyCH4III ACNGT 4 cut(s) 44, 101, 1096, 1284
HpyCH4IV ACGT 2 cut(s) 420, 681
HpyCH4V TGCA 9 cut(s) 371, 443, 464, 577, 635, 677, 851, 891, 1130
HpyF10VI GCNNNNNNNGC 3 cut(s) 574, 780, 1019
HpyF3I CTNAG 3 cut(s) 188, 661, 813
HpySE526I ACGT 2 cut(s) 420, 681
Hsp92II CATG 6 cut(s) 54, 98, 111, 317, 807, 989
Ksp22I TGATCA 1 cut(s) 304
KspAI GTTAAC 1 cut(s) 561
Kzo9I GATC 5 cut(s) 6, 184, 304, 832, 982
LmnI GCTCC 3 cut(s) 286, 1081, 1213
Lsp1109I GCAGC 4 cut(s) 5, 455, 563, 1114
LweI GCATC 5 cut(s) 65, 159, 451, 813, 1472
MaeI CTAG 4 cut(s) 167, 536, 1025, 1233
MaeII ACGT 2 cut(s) 420, 681
MaeIII GTNAC 5 cut(s) 362, 753, 1144, 1289, 1396
MalI GATC 5 cut(s) 8, 186, 306, 834, 984
MbiI CCGCTC 1 cut(s) 1201
MboI GATC 5 cut(s) 6, 184, 304, 832, 982
MboII GAAGA 8 cut(s) 140, 191, 409, 752, 832, 1217, 1430, 1441
MflI RGATCY 1 cut(s) 832
MhlI GDGCHC 4 cut(s) 933, 954, 1024, 1218
MluCI AATT 7 cut(s) 131, 243, 346, 404, 688, 1259, 1311
MluI ACGCGT 1 cut(s) 1164
MmeI TCCRAC 1 cut(s) 1017
MseI TTAA 6 cut(s) 242, 345, 560, 1031, 1247, 1487
MslI CAYNNNNRTG 2 cut(s) 99, 312
MspA1I CMGCKG 1 cut(s) 446
MspI CCGG 1 cut(s) 157
MspR9I CCNGG 3 cut(s) 213, 855, 1268
Mva1269I GAATGC 1 cut(s) 445
MvaI CCWGG 3 cut(s) 213, 855, 1268
MvnI CGCG 1 cut(s) 1166
MwoI GCNNNNNNNGC 3 cut(s) 574, 780, 1019
NdeI CATATG 1 cut(s) 259
NdeII GATC 5 cut(s) 6, 184, 304, 832, 982
NlaIII CATG 6 cut(s) 54, 98, 111, 317, 807, 989
NlaIV GGNNCC 3 cut(s) 113, 194, 207
NmuCI GTSAC 5 cut(s) 362, 753, 1144, 1289, 1396
NspI RCATGY 2 cut(s) 54, 807
NspV TTCGAA 1 cut(s) 248
PceI AGGCCT 1 cut(s) 342
PciI ACATGT 1 cut(s) 803
PctI GAATGC 1 cut(s) 445
PfeI GAWTC 3 cut(s) 1060, 1229, 1376
PflMI CCANNNNNTGG 1 cut(s) 996
PkrI GCNGC 6 cut(s) 17, 20, 445, 553, 860, 1129
PscI ACATGT 1 cut(s) 803
PshAI GACNNNNGTC 1 cut(s) 1351
PsiI TTATAA 1 cut(s) 69
Psp6I CCWGG 3 cut(s) 211, 853, 1266
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 3 cut(s) 211, 853, 1266
PspN4I GGNNCC 3 cut(s) 113, 194, 207
PspPI GGNCC 1 cut(s) 112
PsuI RGATCY 1 cut(s) 832
PvuII CAGCTG 1 cut(s) 446
RsaI GTAC 4 cut(s) 55, 161, 1169, 1369
RsaNI GTAC 4 cut(s) 54, 160, 1168, 1368
RseI CAYNNNNRTG 2 cut(s) 99, 312
SaqAI TTAA 6 cut(s) 242, 345, 560, 1031, 1247, 1487
SatI GCNGC 6 cut(s) 16, 19, 444, 552, 859, 1128
Sau3AI GATC 5 cut(s) 6, 184, 304, 832, 982
Sau96I GGNCC 1 cut(s) 112
ScrFI CCNGG 3 cut(s) 213, 855, 1268
SduI GDGCHC 4 cut(s) 933, 954, 1024, 1218
SfaNI GCATC 5 cut(s) 65, 159, 451, 813, 1472
SfuI TTCGAA 1 cut(s) 248
SmiMI CAYNNNNRTG 2 cut(s) 99, 312
SmlI CTYRAG 2 cut(s) 29, 1219
SmoI CTYRAG 2 cut(s) 29, 1219
Sse9I AATT 7 cut(s) 131, 243, 346, 404, 688, 1259, 1311
SseBI AGGCCT 1 cut(s) 342
SsiI CCGC 4 cut(s) 15, 859, 1201, 1224
SspMI CTAG 4 cut(s) 167, 536, 1025, 1233
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 3 cut(s) 211, 853, 1266
StyI CCWWGG 5 cut(s) 271, 535, 735, 836, 1349
TaaI ACNGT 4 cut(s) 44, 101, 1096, 1284
TaiI ACGT 2 cut(s) 423, 684
TaqI TCGA 2 cut(s) 5, 248
TasI AATT 7 cut(s) 131, 243, 346, 404, 688, 1259, 1311
TatI WGTACW 2 cut(s) 53, 1367
TauI GCSGC 2 cut(s) 18, 861
TfiI GAWTC 3 cut(s) 1060, 1229, 1376
Tru1I TTAA 6 cut(s) 242, 345, 560, 1031, 1247, 1487
Tru9I TTAA 6 cut(s) 242, 345, 560, 1031, 1247, 1487
TscAI CASTG 3 cut(s) 106, 127, 933
TseFI GTSAC 5 cut(s) 362, 753, 1144, 1289, 1396
TseI GCWGC 4 cut(s) 18, 443, 551, 1127
Tsp45I GTSAC 5 cut(s) 362, 753, 1144, 1289, 1396
TspDTI ATGAA 2 cut(s) 192, 1469
TspGWI ACGGA 2 cut(s) 736, 1200
TspRI CASTG 3 cut(s) 106, 127, 933
Van91I CCANNNNNTGG 1 cut(s) 996
XapI RAATTY 3 cut(s) 131, 404, 1259
XceI RCATGY 2 cut(s) 54, 807
XmaJI CCTAGG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 808
XspI CTAG 4 cut(s) 167, 536, 1025, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.