Rh1DG086700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
16109588 .. 16109779
192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG086700.1

Sequence Viewer

Length: 192 bp
ATGCTTTCTCTGTCGGACAGTTTTGATGAGGATGGAGATGACAAGAGCAGCACCAACTGGAATGTTTTCGAGACATCGTTGGTGTTCGCGCTCGTCAGAACATCCCAGGAGAAGACTTCGTTACTCGATCTTGATCAAATCGGCAATGACGACGATGTCGATCGTGATTTTGAGGGAGTTGGAGATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.02

Weight (kDa)

4.05

Isoelectric Point (pI)

16.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 155
AccII CGCG 1 cut(s) 89
AjnI CCWGG 1 cut(s) 105
Alw26I GTCTC 1 cut(s) 65
ApeKI GCWGC 1 cut(s) 48
Asp700I GAANNNNTTC 1 cut(s) 65
AspLEI GCGC 1 cut(s) 91
BbsI GAAGAC 1 cut(s) 119
BbvI GCAGC 1 cut(s) 60
BccI CCATC 1 cut(s) 26
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 1 cut(s) 133
BcoDI GTCTC 1 cut(s) 65
BisI GCNGC 1 cut(s) 49
BlsI GCNGC 1 cut(s) 50
Bme1390I CCNGG 1 cut(s) 107
BmrFI CCNGG 1 cut(s) 107
BpiI GAAGAC 1 cut(s) 119
BsaBI GATNNNNATC 2 cut(s) 132, 159
BsaJI CCNNGG 1 cut(s) 105
Bse1I ACTGG 1 cut(s) 62
Bse3DI GCAATG 1 cut(s) 151
Bse8I GATNNNNATC 2 cut(s) 132, 159
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 1 cut(s) 105
BseGI GGATG 2 cut(s) 37, 101
BseJI GATNNNNATC 2 cut(s) 132, 159
BseMI GCAATG 1 cut(s) 151
BseNI ACTGG 1 cut(s) 62
BseXI GCAGC 1 cut(s) 60
Bsh1236I CGCG 1 cut(s) 89
Bsh1285I CGRYCG 1 cut(s) 163
BsiEI CGRYCG 1 cut(s) 163
BsmAI GTCTC 1 cut(s) 65
Bsp143I GATC 3 cut(s) 127, 133, 160
BspFNI CGCG 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 151
BsrI ACTGG 1 cut(s) 62
BssECI CCNNGG 1 cut(s) 105
BssMI GATC 3 cut(s) 127, 133, 160
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 20
BstF5I GGATG 2 cut(s) 37, 101
BstFNI CGCG 1 cut(s) 89
BstHHI GCGC 1 cut(s) 91
BstKTI GATC 3 cut(s) 130, 136, 163
BstMAI GTCTC 1 cut(s) 65
BstMBI GATC 3 cut(s) 127, 133, 160
BstMCI CGRYCG 1 cut(s) 163
BstNI CCWGG 1 cut(s) 107
BstSCI CCNGG 1 cut(s) 105
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 1 cut(s) 60
BstV2I GAAGAC 1 cut(s) 119
BtsCI GGATG 2 cut(s) 37, 101
CfoI GCGC 1 cut(s) 91
DpnI GATC 3 cut(s) 129, 135, 162
DpnII GATC 3 cut(s) 127, 133, 160
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 105
FaiI YATR 2 cut(s) 188, 190
FbaI TGATCA 1 cut(s) 133
Fnu4HI GCNGC 1 cut(s) 49
FokI GGATG 2 cut(s) 44, 88
Fsp4HI GCNGC 1 cut(s) 49
GlaI GCGC 1 cut(s) 90
GluI GCNGC 1 cut(s) 49
HhaI GCGC 1 cut(s) 91
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
Hpy188I TCNGA 2 cut(s) 16, 98
Hpy188III TCNNGA 3 cut(s) 70, 131, 164
Hpy99I CGWCG 1 cut(s) 155
HpyCH4III ACNGT 1 cut(s) 20
HspAI GCGC 1 cut(s) 89
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 3 cut(s) 127, 133, 160
LpnPI CCDG 3 cut(s) 43, 92, 119
Lsp1109I GCAGC 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 120
MalI GATC 3 cut(s) 129, 135, 162
MboI GATC 3 cut(s) 127, 133, 160
MboII GAAGA 1 cut(s) 124
MmeI TCCRAC 1 cut(s) 160
MnlI CCTC 2 cut(s) 22, 166
MroXI GAANNNNTTC 1 cut(s) 65
MspR9I CCNGG 1 cut(s) 107
MvaI CCWGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 89
NdeII GATC 3 cut(s) 127, 133, 160
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 156
PdmI GAANNNNTTC 1 cut(s) 65
PflFI GACNNNGTC 1 cut(s) 155
PkrI GCNGC 1 cut(s) 50
Ple19I CGATCG 1 cut(s) 163
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PsyI GACNNNGTC 1 cut(s) 155
PvuI CGATCG 1 cut(s) 163
SatI GCNGC 1 cut(s) 49
Sau3AI GATC 3 cut(s) 127, 133, 160
ScrFI CCNGG 1 cut(s) 107
StyD4I CCNGG 1 cut(s) 105
TaaI ACNGT 1 cut(s) 20
TaqI TCGA 3 cut(s) 69, 126, 159
TseI GCWGC 1 cut(s) 48
Tth111I GACNNNGTC 1 cut(s) 155
XmnI GAANNNNTTC 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.