Calcium-dependent protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47220 |
| rosa_chinensis | RchiOBHm_Chr1g0315951 RchiOBHm_Chr1g0318391 RchiOBHm_Chr1g0348801 RchiOBHm_Chr5g0066701 RchiOBHm_Chr6g0274561 |
| rosa_laevigata | RLG00000009806 RLG00000014185 RLG00000036187 |
| rosa_multiflora | Rmu_sc0000148.1_g000004 Rmu_sc0002377.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00298160 Rroxscaffold_4G00308320 |
| rosa_rugosa | Rorug02G0166300 |
| rosa_samantha | Rh1AG058300 Rh1AG274400 Rh1BG049400 Rh1DG110100 Rh2AG452100 Rh2CG628200 Rh3CG349600 Rh5CG576900 Rh6BG000700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 413 |
| Acc36I | ACCTGC | 2 cut(s) | 413, 419 |
| AccBSI | CCGCTC | 2 cut(s) | 96, 473 |
| AciI | CCGC | 2 cut(s) | 96, 471 |
| AcsI | RAATTY | 1 cut(s) | 20 |
| AdeI | CACNNNGTG | 1 cut(s) | 239 |
| AgsI | TTSAA | 4 cut(s) | 25, 325, 362, 395 |
| AluBI | AGCT | 2 cut(s) | 299, 341 |
| AluI | AGCT | 2 cut(s) | 299, 341 |
| Alw21I | GWGCWC | 1 cut(s) | 301 |
| Alw26I | GTCTC | 1 cut(s) | 244 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApoI | RAATTY | 1 cut(s) | 20 |
| AspS9I | GGNCC | 1 cut(s) | 220 |
| AsuHPI | GGTGA | 1 cut(s) | 134 |
| AsuNHI | GCTAGC | 1 cut(s) | 341 |
| BanII | GRGCYC | 1 cut(s) | 301 |
| Bbv12I | GWGCWC | 1 cut(s) | 301 |
| BccI | CCATC | 2 cut(s) | 113, 361 |
| BciVI | GTATCC | 2 cut(s) | 195, 364 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcoDI | GTCTC | 1 cut(s) | 244 |
| BfaI | CTAG | 2 cut(s) | 342, 465 |
| BfuAI | ACCTGC | 2 cut(s) | 413, 419 |
| BfuI | GTATCC | 2 cut(s) | 195, 364 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 218 |
| BisI | GCNGC | 1 cut(s) | 471 |
| BlsI | GCNGC | 1 cut(s) | 472 |
| BmgT120I | GGNCC | 1 cut(s) | 220 |
| BmiI | GGNNCC | 1 cut(s) | 222 |
| BmtI | GCTAGC | 1 cut(s) | 345 |
| BsaBI | GATNNNNATC | 2 cut(s) | 56, 192 |
| Bse3DI | GCAATG | 1 cut(s) | 462 |
| Bse8I | GATNNNNATC | 2 cut(s) | 56, 192 |
| BseGI | GGATG | 2 cut(s) | 148, 193 |
| BseJI | GATNNNNATC | 2 cut(s) | 56, 192 |
| BseMI | GCAATG | 1 cut(s) | 462 |
| BseRI | GAGGAG | 1 cut(s) | 416 |
| BsgI | GTGCAG | 1 cut(s) | 447 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BsiHKAI | GWGCWC | 1 cut(s) | 301 |
| BsmAI | GTCTC | 1 cut(s) | 244 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bsp1286I | GDGCHC | 1 cut(s) | 301 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspACI | CCGC | 2 cut(s) | 96, 471 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspHI | TCATGA | 1 cut(s) | 87 |
| BspLI | GGNNCC | 1 cut(s) | 222 |
| BspMI | ACCTGC | 2 cut(s) | 413, 419 |
| BspOI | GCTAGC | 1 cut(s) | 345 |
| BspQI | GCTCTTC | 1 cut(s) | 86 |
| BsrBI | CCGCTC | 2 cut(s) | 96, 473 |
| BsrDI | GCAATG | 1 cut(s) | 462 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst4CI | ACNGT | 2 cut(s) | 247, 415 |
| Bst6I | CTCTTC | 3 cut(s) | 86, 438, 480 |
| BstC8I | GCNNGC | 1 cut(s) | 343 |
| BstF5I | GGATG | 2 cut(s) | 148, 193 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 1 cut(s) | 244 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 218, 227, 461, 470, 503 |
| BsuI | GTATCC | 2 cut(s) | 195, 364 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 2 cut(s) | 148, 193 |
| BveI | ACCTGC | 2 cut(s) | 413, 419 |
| Cac8I | GCNNGC | 1 cut(s) | 343 |
| CciI | TCATGA | 1 cut(s) | 87 |
| Cfr13I | GGNCC | 1 cut(s) | 220 |
| CviAII | CATG | 1 cut(s) | 88 |
| CviJI | RGCY | 7 cut(s) | 221, 259, 299, 314, 341, 464, 470 |
| CviKI_1 | RGCY | 7 cut(s) | 221, 259, 299, 314, 341, 464, 470 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| DraIII | CACNNNGTG | 1 cut(s) | 239 |
| Eam1104I | CTCTTC | 3 cut(s) | 86, 438, 480 |
| EarI | CTCTTC | 3 cut(s) | 86, 438, 480 |
| Ecl136II | GAGCTC | 1 cut(s) | 299 |
| Eco24I | GRGCYC | 1 cut(s) | 301 |
| Eco32I | GATATC | 1 cut(s) | 58 |
| Eco53kI | GAGCTC | 1 cut(s) | 299 |
| EcoICRI | GAGCTC | 1 cut(s) | 299 |
| EcoO109I | RGGNCCY | 1 cut(s) | 220 |
| EcoRI | GAATTC | 1 cut(s) | 20 |
| EcoRV | GATATC | 1 cut(s) | 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 301 |
| FaeI | CATG | 1 cut(s) | 91 |
| FaiI | YATR | 5 cut(s) | 46, 89, 311, 347, 519 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 28 |
| FatI | CATG | 1 cut(s) | 87 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 1 cut(s) | 471 |
| FokI | GGATG | 2 cut(s) | 155, 200 |
| FriOI | GRGCYC | 1 cut(s) | 301 |
| Fsp4HI | GCNGC | 1 cut(s) | 471 |
| FspBI | CTAG | 2 cut(s) | 342, 465 |
| GluI | GCNGC | 1 cut(s) | 471 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| Hin1II | CATG | 1 cut(s) | 91 |
| HincII | GTYRAC | 1 cut(s) | 434 |
| HindII | GTYRAC | 1 cut(s) | 434 |
| HinfI | GANTC | 3 cut(s) | 99, 168, 391 |
| HphI | GGTGA | 1 cut(s) | 134 |
| Hpy166II | GTNNAC | 1 cut(s) | 434 |
| Hpy188I | TCNGA | 1 cut(s) | 51 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 88 |
| Hpy8I | GTNNAC | 1 cut(s) | 434 |
| HpyAV | CCTTC | 2 cut(s) | 211, 454 |
| HpyCH4III | ACNGT | 2 cut(s) | 247, 415 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 428 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 218, 227, 461, 470, 503 |
| Hsp92II | CATG | 1 cut(s) | 91 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LguI | GCTCTTC | 1 cut(s) | 86 |
| LmnI | GCTCC | 1 cut(s) | 235 |
| LpnPI | CCDG | 2 cut(s) | 408, 414 |
| MaeI | CTAG | 2 cut(s) | 342, 465 |
| MaeIII | GTNAC | 1 cut(s) | 241 |
| MalI | GATC | 1 cut(s) | 192 |
| MbiI | CCGCTC | 2 cut(s) | 96, 473 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 3 cut(s) | 103, 455, 497 |
| MhlI | GDGCHC | 1 cut(s) | 301 |
| MluCI | AATT | 2 cut(s) | 20, 266 |
| MlyI | GAGTC | 2 cut(s) | 108, 177 |
| MnlI | CCTC | 9 cut(s) | 64, 70, 139, 145, 325, 346, 394, 445, 487 |
| MseI | TTAA | 2 cut(s) | 407, 535 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 218, 227, 461, 470, 503 |
| NdeII | GATC | 1 cut(s) | 190 |
| NheI | GCTAGC | 1 cut(s) | 341 |
| NlaIII | CATG | 1 cut(s) | 91 |
| NlaIV | GGNNCC | 1 cut(s) | 222 |
| NmeAIII | GCCGAG | 1 cut(s) | 340 |
| NmuCI | GTSAC | 1 cut(s) | 241 |
| PagI | TCATGA | 1 cut(s) | 87 |
| PaqCI | CACCTGC | 1 cut(s) | 413 |
| PciSI | GCTCTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 1 cut(s) | 391 |
| PkrI | GCNGC | 1 cut(s) | 472 |
| PleI | GAGTC | 2 cut(s) | 107, 176 |
| PpsI | GAGTC | 2 cut(s) | 107, 176 |
| Psp124BI | GAGCTC | 1 cut(s) | 301 |
| PspN4I | GGNNCC | 1 cut(s) | 222 |
| PspPI | GGNCC | 1 cut(s) | 220 |
| SacI | GAGCTC | 1 cut(s) | 301 |
| SapI | GCTCTTC | 1 cut(s) | 86 |
| SaqAI | TTAA | 2 cut(s) | 407, 535 |
| SatI | GCNGC | 1 cut(s) | 471 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| Sau96I | GGNCC | 1 cut(s) | 220 |
| SchI | GAGTC | 2 cut(s) | 108, 177 |
| SduI | GDGCHC | 1 cut(s) | 301 |
| SetI | ASST | 9 cut(s) | 75, 81, 87, 150, 156, 301, 343, 427, 433 |
| Sse9I | AATT | 2 cut(s) | 20, 266 |
| SsiI | CCGC | 2 cut(s) | 96, 471 |
| SspMI | CTAG | 2 cut(s) | 342, 465 |
| SstI | GAGCTC | 1 cut(s) | 301 |
| TaaI | ACNGT | 2 cut(s) | 247, 415 |
| TasI | AATT | 2 cut(s) | 20, 266 |
| TauI | GCSGC | 1 cut(s) | 473 |
| TfiI | GAWTC | 1 cut(s) | 391 |
| Tru1I | TTAA | 2 cut(s) | 407, 535 |
| Tru9I | TTAA | 2 cut(s) | 407, 535 |
| TseFI | GTSAC | 1 cut(s) | 241 |
| Tsp45I | GTSAC | 1 cut(s) | 241 |
| TspDTI | ATGAA | 8 cut(s) | 17, 95, 104, 164, 293, 456, 473, 498 |
| TspGWI | ACGGA | 1 cut(s) | 42 |
| XapI | RAATTY | 1 cut(s) | 20 |
| XspI | CTAG | 2 cut(s) | 342, 465 |