Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004184

Physical Location & Seq

Genomic Coordinates Reverse (-)

40757599 .. 40767860

Gene Structure 10262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG208900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGATGCAGAGGCTCAAGGAAGCTGTATTAGCCAGACGCGGCGGCCTTGACAGTTGTCGTTTCCTCAGCCATTGCAGCAGAAGAGGCCTCTGCTCTCTCCCGGACACTGCCCTCAACGATGATCTTGATAACCAAGTATTGGTTGAAGGCAAAGCTTGGTCCAGAACTGCAGTTCTCAACAGACCTTCAGTGCTCAATGCTCTCACTACTGCAATGGTTTTCGCTACCCCTGAAACTCTAATTGGTTTCCATCCAGATGCTGGGGCATCCTTTTACCTTTCACATCTACCCGGTCACTTAGGGGAGTTCTTGGCTCTTACAAGTGAAAAACTCAATGGACCTGAGATGCTTGCTTGTGGGCTTGCTACACACTATTTGCATAGTTCAAGGATTCCATTAATCGAAGAAGAACTTGGGAAGTTAGTCACTGATGATCCTTCTGTCATTGAAACTTGTTTAGACAAACATGGGGAACTTGTCCATCCAGATAAGTCAAGTGTGCTTCACAGGATTGAATTACTTGATGAATGTTTCAGCCATGACACAGTTGAAGAGATTATAGATGCCTTGGAAATTGAGGCAGGCAGAACAAAGGATCCATGGTGCATTTCTACTCTAAAGAGACTTAAAGAAGTCTCGCCATTGAGCTTGAAGGTTTCCCTTAGATCTATAAGAGAAGGAAGATTTCAGACCCTTGATCAGTGCTTGGTCCGTGAGTACCGAATGTCCTTACAGGGAATTTCTAAGCAGATTACTGGTGACTTCTGTGAGGGGGTTCGGGCACGACTAGTCGAAAAGGACTCAGCCCCAAAGGCTTCCCAAGATAAAAAGAGCTTGGATGTAGGGGCGAACCTTTTCGTCGGAAATCTTGATCCTGACGTGGATGAGAAACTTCTCTATGATACTTTCAGTGCATTTGGAGTCATAGTTACAAACCCAAAGATAATGAGAGACCCTGAAACTGGGAACTCCCGTGGATTTGGCTTCATTAGCTATGATTCCTTTGAGGCATCTGATGCAGCAATTGAGGCAATGAATGGCCAGTATCTGTGCAATCGTCAAATAACAGTCTCATATGCATATAAGAAAGACACTAAAGGGGAGCGTCATGGCACTCCGGCAGAGAGAGTTTTGGCTGCTAGCAATCCTACATCTAAGAGCCGGCCTCACACACTGTTTGCTAGTGGACCTCCAACACTTCCCAATGGTTCTCAGGCCAATGGTACCATGGGTGCTCCAGTGCCTCCACGTCCCTTTGCAAATGGCGGTGTTGGTCCAGGTCTGATTCCGCCGCTTCGTCCACAGCCCCCCCAAGGTATGGCTTTCCCGCCAATGCAGATGGCTGTTCAACCAACTTGGCAAGGTCAGCCTCAACAACCAGGTCAACCAATGATGCCTCCACCGCCAATGCAGCAGTTCAGACCTGCTCCCCCGAACATGCCGCCACCCCCTCCACAGGCAGCTCCAGCTCCTCCACGGCCGCTTCCACCTCCTATGGCTATGGGCAACCAACAACAGATGTGGCGGCCACCACCTCCCCCTCAAATGAGGCCTCCTAACATGCAACACGCATCAATGCCGCCACCTCCCCCACTTAACAATCCACCCCTACTGCCACCTCCTATGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00280 ko00410 ko00640 ko01100 ko01200 map00280 map00410 map00640 map01100 map01200

Pfam Domains

Protein Families

ECH_2

Protein Analysis

543

Amino Acids

59.29

Weight (kDa)

6.51

Isoelectric Point (pI)

50.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ECH_2	PF16113	69 - 272	9.2e-62	Enoyl-CoA hydratase/isomerase
RRM_1	PF00076	285 - 356	1e-20	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60510 AT3G60510 AT3G60510
fragaria_vesca	FvH4_7g10610 FvH4_7g10610 FvH4_7g10610 FvH4_7g10610 FvH4_7g10610 FvH4_7g10610 FvH4_7g10610 FvH4_7g10610
malus_domestica	MD07G1111300.v1.1
prunus_persica	Prupe.2G134700_v2.0.a1 Prupe.2G134700_v2.0.a1 Prupe.2G134700_v2.0.a1 Prupe.2G134700_v2.0.a1 Prupe.2G134700_v2.0.a1
pyrus_communis	pycom07g09610
rosa_chinensis	RchiOBHm_Chr1g0348451 RchiOBHm_Chr1g0348531
rosa_laevigata	RLG00000028641 RLG00000028649 RLG00000028657
rosa_multiflora	Rmu_sc0000091.1_g000013
rosa_roxburghii	Rroxscaffold_4G00306970
rosa_rugosa	Rorug01G0194700 Rorug01G0194800
rosa_samantha	Rh1AG212800 Rh1BG179200 Rh1CG197100 Rh1DG208900 Rh1DG209300
rosa_wichuraiana	Rw1G018010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1432
Acc65I	GGTACC	1 cut(s)	1223
AccB1I	GGYRCC	1 cut(s)	1223
AccB7I	CCANNNNNTGG	3 cut(s)	139, 260, 1318
AccII	CGCG	1 cut(s)	39
AclWI	GGATC	4 cut(s)	428, 590, 603, 866
AcoI	YGGCCR	3 cut(s)	1039, 1478, 1526
AcsI	RAATTY	1 cut(s)	738
AcuI	CTGAAG	1 cut(s)	171
AfaI	GTAC	2 cut(s)	719, 1225
AfiI	CCNNNNNNNGG	6 cut(s)	139, 260, 962, 1313, 1318, 1456
AgsI	TTSAA	7 cut(s)	146, 387, 449, 515, 551, 652, 1349
AhlI	ACTAGT	1 cut(s)	787
AjiI	CACGTC	2 cut(s)	880, 1250
AjnI	CCWGG	2 cut(s)	1276, 1378
AjuI	GAANNNNNNNTTGG	4 cut(s)	225, 257, 396, 428
AloI	GAACNNNNNNTCC	2 cut(s)	580, 612
AluBI	AGCT	7 cut(s)	23, 155, 648, 834, 993, 1463, 1469
AluI	AGCT	7 cut(s)	23, 155, 648, 834, 993, 1463, 1469
Alw21I	GWGCWC	2 cut(s)	195, 1237
Alw26I	GTCTC	4 cut(s)	616, 640, 945, 1075
AlwI	GGATC	4 cut(s)	428, 590, 603, 866
AlwNI	CAGNNNCTG	2 cut(s)	260, 1048
AoxI	GGCC	8 cut(s)	43, 85, 1039, 1163, 1215, 1478, 1526, 1550
ApeKI	GCWGC	5 cut(s)	75, 1019, 1136, 1411, 1460
ApoI	RAATTY	1 cut(s)	738
AseI	ATTAAT	1 cut(s)	398
Asp700I	GAANNNNTTC	1 cut(s)	854
Asp718I	GGTACC	1 cut(s)	1223
AspS9I	GGNCC	5 cut(s)	159, 338, 709, 1187, 1274
AsuC2I	CCSGG	2 cut(s)	101, 291
AsuHPI	GGTGA	1 cut(s)	770
AsuNHI	GCTAGC	1 cut(s)	1139
AvaII	GGWCC	5 cut(s)	159, 338, 709, 1187, 1274
BaeGI	GKGCMC	1 cut(s)	784
BalI	TGGCCA	1 cut(s)	1041
BamHI	GGATCC	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	1223
Bbv12I	GWGCWC	2 cut(s)	195, 1237
BbvCI	CCTCAGC	1 cut(s)	65
BbvI	GCAGC	5 cut(s)	87, 1031, 1123, 1423, 1472
BccI	CCATC	3 cut(s)	258, 489, 1333
BceAI	ACGGC	1 cut(s)	1493
BciT130I	CCWGG	2 cut(s)	1278, 1380
BclI	TGATCA	1 cut(s)	697
BcnI	CCSGG	2 cut(s)	101, 291
BcoDI	GTCTC	4 cut(s)	616, 640, 945, 1075
BcuI	ACTAGT	1 cut(s)	787
BfaI	CTAG	3 cut(s)	788, 1140, 1182
BfmI	CTRYAG	1 cut(s)	168
BfuAI	ACCTGC	1 cut(s)	1432
BglI	GCCNNNNNGGC	1 cut(s)	812
BglII	AGATCT	1 cut(s)	665
Bme1390I	CCNGG	4 cut(s)	101, 291, 1278, 1380
Bme18I	GGWCC	5 cut(s)	159, 338, 709, 1187, 1274
BmgBI	CACGTC	2 cut(s)	880, 1250
BmgT120I	GGNCC	5 cut(s)	159, 338, 709, 1187, 1274
BmiI	GGNNCC	2 cut(s)	597, 1225
BmrFI	CCNGG	4 cut(s)	101, 291, 1278, 1380
BmrI	ACTGGG	1 cut(s)	972
BmsI	GCATC	8 cut(s)	247, 275, 336, 553, 1006, 1019, 1383, 1580
BmtI	GCTAGC	1 cut(s)	1143
BmuI	ACTGGG	1 cut(s)	972
BoxI	GACNNNNGTC	1 cut(s)	54
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	2 cut(s)	1221, 1449
Bpu10I	CCTNAGC	1 cut(s)	65
BpuMI	CCSGG	2 cut(s)	101, 291
BsaI	GGTCTC	1 cut(s)	945
BsaJI	CCNNGG	6 cut(s)	567, 599, 973, 1227, 1312, 1475
BsaXI	ACNNNNNCTCC	2 cut(s)	912, 942
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 260, 962, 1313, 1318, 1456
Bse118I	RCCGGY	1 cut(s)	1161
Bse1I	ACTGG	4 cut(s)	760, 967, 1042, 1238
Bse3DI	GCAATG	3 cut(s)	70, 219, 1038
BseBI	CCWGG	2 cut(s)	1278, 1380
BseDI	CCNNGG	6 cut(s)	567, 599, 973, 1227, 1312, 1475
BseGI	GGATG	5 cut(s)	250, 266, 481, 844, 889
BseLI	CCNNNNNNNGG	6 cut(s)	139, 260, 962, 1313, 1318, 1456
BseMI	GCAATG	3 cut(s)	70, 219, 1038
BseMII	CTCAG	4 cut(s)	79, 333, 816, 1226
BseNI	ACTGG	4 cut(s)	760, 967, 1042, 1238
BseRI	GAGGAG	1 cut(s)	1461
BseSI	GKGCMC	1 cut(s)	784
BseX3I	CGGCCG	1 cut(s)	1478
BseXI	GCAGC	5 cut(s)	87, 1031, 1123, 1423, 1472
BseYI	CCCAGC	1 cut(s)	260
Bsh1236I	CGCG	1 cut(s)	39
Bsh1285I	CGRYCG	1 cut(s)	1481
BshFI	GGCC	8 cut(s)	45, 87, 1041, 1165, 1217, 1480, 1528, 1552
BshNI	GGYRCC	1 cut(s)	1223
BsiEI	CGRYCG	1 cut(s)	1481
BsiHKAI	GWGCWC	2 cut(s)	195, 1237
BsiSI	CCGG	4 cut(s)	101, 291, 1118, 1162
BslFI	GGGAC	1 cut(s)	1236
BslI	CCNNNNNNNGG	6 cut(s)	139, 260, 962, 1313, 1318, 1456
BsmAI	GTCTC	4 cut(s)	616, 640, 945, 1075
BsmFI	GGGAC	1 cut(s)	1236
BsnI	GGCC	8 cut(s)	45, 87, 1041, 1165, 1217, 1480, 1528, 1552
Bso31I	GGTCTC	1 cut(s)	945
Bsp1286I	GDGCHC	3 cut(s)	195, 784, 1237
Bsp143I	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
Bsp19I	CCATGG	2 cut(s)	599, 1227
BspANI	GGCC	8 cut(s)	45, 87, 1041, 1165, 1217, 1480, 1528, 1552
BspCNI	CTCAG	4 cut(s)	78, 334, 815, 1225
BspFNI	CGCG	1 cut(s)	39
BspLI	GGNNCC	2 cut(s)	597, 1225
BspMAI	CTGCAG	1 cut(s)	172
BspMI	ACCTGC	1 cut(s)	1432
BspOI	GCTAGC	1 cut(s)	1143
BspPI	GGATC	4 cut(s)	428, 590, 603, 866
BspT107I	GGYRCC	1 cut(s)	1223
BspTNI	GGTCTC	1 cut(s)	945
BsrDI	GCAATG	3 cut(s)	70, 219, 1038
BsrFI	RCCGGY	1 cut(s)	1161
BsrI	ACTGG	4 cut(s)	760, 967, 1042, 1238
BssAI	RCCGGY	1 cut(s)	1161
BssECI	CCNNGG	6 cut(s)	567, 599, 973, 1227, 1312, 1475
BssMI	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
BssT1I	CCWWGG	4 cut(s)	567, 599, 1227, 1312
Bst2UI	CCWGG	2 cut(s)	1278, 1380
Bst4CI	ACNGT	4 cut(s)	53, 547, 1069, 1176
Bst6I	CTCTTC	2 cut(s)	76, 546
BstAPI	GCANNNNNTGC	1 cut(s)	1016
BstC8I	GCNNGC	5 cut(s)	351, 363, 583, 1141, 1163
BstDEI	CTNAG	8 cut(s)	65, 298, 342, 662, 744, 802, 1155, 1212
BstDSI	CCRYGG	4 cut(s)	599, 973, 1227, 1475
BstF5I	GGATG	5 cut(s)	250, 266, 481, 844, 889
BstFNI	CGCG	1 cut(s)	39
BstKTI	GATC	6 cut(s)	124, 436, 598, 668, 700, 874
BstMAI	GTCTC	4 cut(s)	616, 640, 945, 1075
BstMBI	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
BstMCI	CGRYCG	1 cut(s)	1481
BstNI	CCWGG	2 cut(s)	1278, 1380
BstNSI	RCATGY	2 cut(s)	1441, 1564
BstPAI	GACNNNNGTC	1 cut(s)	54
BstSCI	CCNGG	4 cut(s)	99, 289, 1276, 1378
BstSFI	CTRYAG	1 cut(s)	168
BstSLI	GKGCMC	1 cut(s)	784
BstUI	CGCG	1 cut(s)	39
BstV1I	GCAGC	5 cut(s)	87, 1031, 1123, 1423, 1472
BstX2I	RGATCY	2 cut(s)	595, 665
BstYI	RGATCY	2 cut(s)	595, 665
BstZI	CGGCCG	1 cut(s)	1478
BsuRI	GGCC	8 cut(s)	45, 87, 1041, 1165, 1217, 1480, 1528, 1552
BtgI	CCRYGG	4 cut(s)	599, 973, 1227, 1475
BtrI	CACGTC	2 cut(s)	880, 1250
BtsCI	GGATG	5 cut(s)	250, 266, 481, 844, 889
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	7 cut(s)	105, 195, 426, 707, 916, 1172, 1245
BveI	ACCTGC	1 cut(s)	1432
Cac8I	GCNNGC	5 cut(s)	351, 363, 583, 1141, 1163
CaiI	CAGNNNCTG	2 cut(s)	260, 1048
Cfr10I	RCCGGY	1 cut(s)	1161
Cfr13I	GGNCC	5 cut(s)	159, 338, 709, 1187, 1274
CseI	GACGC	2 cut(s)	45, 1094
CsiI	ACCWGGT	1 cut(s)	1378
Csp6I	GTAC	2 cut(s)	718, 1224
CspCI	CAANNNNNGTGG	2 cut(s)	1502, 1537
CviAII	CATG	7 cut(s)	467, 539, 600, 1109, 1228, 1438, 1561
CviQI	GTAC	2 cut(s)	718, 1224
DdeI	CTNAG	8 cut(s)	65, 298, 342, 662, 744, 802, 1155, 1212
DpnI	GATC	6 cut(s)	123, 435, 597, 667, 699, 873
DpnII	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
EaeI	YGGCCR	3 cut(s)	1039, 1478, 1526
EagI	CGGCCG	1 cut(s)	1478
Eam1104I	CTCTTC	2 cut(s)	76, 546
EarI	CTCTTC	2 cut(s)	76, 546
EciI	GGCGGA	1 cut(s)	1278
EclXI	CGGCCG	1 cut(s)	1478
Eco130I	CCWWGG	4 cut(s)	567, 599, 1227, 1312
Eco147I	AGGCCT	2 cut(s)	87, 1552
Eco31I	GGTCTC	1 cut(s)	945
Eco47I	GGWCC	5 cut(s)	159, 338, 709, 1187, 1274
Eco52I	CGGCCG	1 cut(s)	1478
Eco57I	CTGAAG	1 cut(s)	171
EcoRII	CCWGG	2 cut(s)	1276, 1378
EcoT14I	CCWWGG	4 cut(s)	567, 599, 1227, 1312
EcoT22I	ATGCAT	1 cut(s)	1081
ErhI	CCWWGG	4 cut(s)	567, 599, 1227, 1312
FaeI	CATG	7 cut(s)	470, 542, 603, 1112, 1231, 1441, 1564
FalI	AAGNNNNNCTT	2 cut(s)	396, 428
FaqI	GGGAC	1 cut(s)	1236
FatI	CATG	7 cut(s)	466, 538, 599, 1108, 1227, 1437, 1560
FauI	CCCGC	1 cut(s)	1335
FauNDI	CATATG	1 cut(s)	1075
FbaI	TGATCA	1 cut(s)	697
FokI	GGATG	5 cut(s)	237, 253, 468, 851, 896
FspBI	CTAG	3 cut(s)	788, 1140, 1182
GsaI	CCCAGC	1 cut(s)	264
GsuI	CTGGAG	2 cut(s)	1221, 1449
HaeIII	GGCC	8 cut(s)	45, 87, 1041, 1165, 1217, 1480, 1528, 1552
HapII	CCGG	4 cut(s)	101, 291, 1118, 1162
HgaI	GACGC	2 cut(s)	45, 1094
Hin1II	CATG	7 cut(s)	470, 542, 603, 1112, 1231, 1441, 1564
HincII	GTYRAC	1 cut(s)	1385
HindII	GTYRAC	1 cut(s)	1385
HindIII	AAGCTT	1 cut(s)	153
HinfI	GANTC	5 cut(s)	391, 800, 921, 998, 1285
HpaII	CCGG	4 cut(s)	101, 291, 1118, 1162
HphI	GGTGA	1 cut(s)	770
Hpy166II	GTNNAC	3 cut(s)	1187, 1301, 1385
Hpy188I	TCNGA	5 cut(s)	690, 863, 1015, 1284, 1421
Hpy188III	TCNNGA	6 cut(s)	125, 162, 254, 485, 869, 875
Hpy8I	GTNNAC	3 cut(s)	1187, 1301, 1385
Hpy99I	CGWCG	1 cut(s)	863
HpyAV	CCTTC	5 cut(s)	140, 195, 447, 646, 671
HpyCH4III	ACNGT	4 cut(s)	53, 547, 1069, 1176
HpyCH4IV	ACGT	2 cut(s)	879, 1249
HpyF3I	CTNAG	8 cut(s)	65, 298, 342, 662, 744, 802, 1155, 1212
HpySE526I	ACGT	2 cut(s)	879, 1249
Hsp92II	CATG	7 cut(s)	470, 542, 603, 1112, 1231, 1441, 1564
KpnI	GGTACC	1 cut(s)	1227
KroI	GCCGGC	1 cut(s)	1161
KroNI	GCCGGC	1 cut(s)	1163
Ksp22I	TGATCA	1 cut(s)	697
Kzo9I	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
LmnI	GCTCC	5 cut(s)	1102, 1240, 1432, 1468, 1474
Lsp1109I	GCAGC	5 cut(s)	87, 1031, 1123, 1423, 1472
LweI	GCATC	8 cut(s)	247, 275, 336, 553, 1006, 1019, 1383, 1580
MabI	ACCWGGT	1 cut(s)	1378
MaeI	CTAG	3 cut(s)	788, 1140, 1182
MaeII	ACGT	2 cut(s)	879, 1249
MaeIII	GTNAC	4 cut(s)	293, 424, 758, 928
MalI	GATC	6 cut(s)	123, 435, 597, 667, 699, 873
MboI	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
MboII	GAAGA	5 cut(s)	93, 416, 419, 563, 693
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	2 cut(s)	595, 665
MhlI	GDGCHC	3 cut(s)	195, 784, 1237
MlsI	TGGCCA	1 cut(s)	1041
MluCI	AATT	5 cut(s)	240, 515, 573, 738, 1023
MluNI	TGGCCA	1 cut(s)	1041
MlyI	GAGTC	2 cut(s)	794, 930
MmeI	TCCRAC	2 cut(s)	841, 1217
Mox20I	TGGCCA	1 cut(s)	1041
Mph1103I	ATGCAT	1 cut(s)	1081
MroNI	GCCGGC	1 cut(s)	1161
MroXI	GAANNNNTTC	1 cut(s)	854
MscI	TGGCCA	1 cut(s)	1041
MseI	TTAA	3 cut(s)	398, 627, 1596
MslI	CAYNNNNRTG	1 cut(s)	255
Msp20I	TGGCCA	1 cut(s)	1041
MspI	CCGG	4 cut(s)	101, 291, 1118, 1162
MspR9I	CCNGG	4 cut(s)	101, 291, 1278, 1380
MunI	CAATTG	1 cut(s)	1023
MvaI	CCWGG	2 cut(s)	1278, 1380
MvnI	CGCG	1 cut(s)	39
NaeI	GCCGGC	1 cut(s)	1163
NciI	CCSGG	2 cut(s)	101, 291
NcoI	CCATGG	2 cut(s)	599, 1227
NdeI	CATATG	1 cut(s)	1075
NdeII	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
NgoMIV	GCCGGC	1 cut(s)	1161
NheI	GCTAGC	1 cut(s)	1139
NlaIII	CATG	7 cut(s)	470, 542, 603, 1112, 1231, 1441, 1564
NlaIV	GGNNCC	2 cut(s)	597, 1225
NmuCI	GTSAC	3 cut(s)	293, 424, 758
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	2 cut(s)	1441, 1564
PceI	AGGCCT	2 cut(s)	87, 1552
PdiI	GCCGGC	1 cut(s)	1163
PdmI	GAANNNNTTC	1 cut(s)	854
PfeI	GAWTC	3 cut(s)	391, 998, 1285
PflMI	CCANNNNNTGG	3 cut(s)	139, 260, 1318
PfoI	TCCNGGA	1 cut(s)	99
PleI	GAGTC	2 cut(s)	794, 929
PpsI	GAGTC	2 cut(s)	794, 929
PshAI	GACNNNNGTC	1 cut(s)	54
PshBI	ATTAAT	1 cut(s)	398
Psp6I	CCWGG	2 cut(s)	1276, 1378
PspFI	CCCAGC	1 cut(s)	260
PspGI	CCWGG	2 cut(s)	1276, 1378
PspN4I	GGNNCC	2 cut(s)	597, 1225
PspPI	GGNCC	5 cut(s)	159, 338, 709, 1187, 1274
PstI	CTGCAG	1 cut(s)	172
PstNI	CAGNNNCTG	2 cut(s)	260, 1048
PsuI	RGATCY	2 cut(s)	595, 665
RsaI	GTAC	2 cut(s)	719, 1225
RsaNI	GTAC	2 cut(s)	718, 1224
RseI	CAYNNNNRTG	1 cut(s)	255
SaqAI	TTAA	3 cut(s)	398, 627, 1596
Sau3AI	GATC	6 cut(s)	121, 433, 595, 665, 697, 871
Sau96I	GGNCC	5 cut(s)	159, 338, 709, 1187, 1274
SchI	GAGTC	2 cut(s)	794, 930
ScrFI	CCNGG	4 cut(s)	101, 291, 1278, 1380
SduI	GDGCHC	3 cut(s)	195, 784, 1237
SexAI	ACCWGGT	1 cut(s)	1378
SfaNI	GCATC	8 cut(s)	247, 275, 336, 553, 1006, 1019, 1383, 1580
SfcI	CTRYAG	1 cut(s)	168
SinI	GGWCC	5 cut(s)	159, 338, 709, 1187, 1274
SmiMI	CAYNNNNRTG	1 cut(s)	255
SmlI	CTYRAG	1 cut(s)	14
SmoI	CTYRAG	1 cut(s)	14
SpeI	ACTAGT	1 cut(s)	787
Sse9I	AATT	5 cut(s)	240, 515, 573, 738, 1023
SseBI	AGGCCT	2 cut(s)	87, 1552
SspMI	CTAG	3 cut(s)	788, 1140, 1182
StuI	AGGCCT	2 cut(s)	87, 1552
StyD4I	CCNGG	4 cut(s)	99, 289, 1276, 1378
StyI	CCWWGG	4 cut(s)	567, 599, 1227, 1312
TaaI	ACNGT	4 cut(s)	53, 547, 1069, 1176
TaiI	ACGT	2 cut(s)	882, 1252
TaqI	TCGA	2 cut(s)	402, 792
TasI	AATT	5 cut(s)	240, 515, 573, 738, 1023
TauI	GCSGC	7 cut(s)	42, 45, 1294, 1444, 1483, 1528, 1582
TfiI	GAWTC	3 cut(s)	391, 998, 1285
Tru1I	TTAA	3 cut(s)	398, 627, 1596
Tru9I	TTAA	3 cut(s)	398, 627, 1596
TscAI	CASTG	7 cut(s)	112, 195, 433, 707, 916, 1179, 1245
TseFI	GTSAC	3 cut(s)	293, 424, 758
TseI	GCWGC	5 cut(s)	75, 1019, 1136, 1411, 1460
Tsp45I	GTSAC	3 cut(s)	293, 424, 758
TspDTI	ATGAA	3 cut(s)	540, 976, 1049
TspGWI	ACGGA	1 cut(s)	701
TspRI	CASTG	7 cut(s)	112, 195, 433, 707, 916, 1179, 1245
Van91I	CCANNNNNTGG	3 cut(s)	139, 260, 1318
VpaK11BI	GGWCC	5 cut(s)	159, 338, 709, 1187, 1274
VspI	ATTAAT	1 cut(s)	398
XapI	RAATTY	1 cut(s)	738
XceI	RCATGY	2 cut(s)	1441, 1564
XcmI	CCANNNNNNNNNTGG	2 cut(s)	257, 1225
XmnI	GAANNNNTTC	1 cut(s)	854
XspI	CTAG	3 cut(s)	788, 1140, 1182
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.